AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0267650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 43 sgRNAs with CRISPR-Local

Find 166 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATTCTGATGTGGATAAA+AGG 0.215914 2_2:+69355204 Msa0267650:five_prime_UTR
TAGGAATACTTATAACTAAA+TGG 0.255585 2_2:-69355261 None:intergenic
AAATGGTGGATTCTTGAAAT+TGG 0.255850 2_2:-69355244 None:intergenic
ACCATGTGGTGGTTGACTTT+GGG 0.319146 2_2:+69355058 Msa0267650:five_prime_UTR
AAAACTGTTATTTGCAAAAC+AGG 0.340762 2_2:-69355583 None:intergenic
CACCGATACAAGAGCCTTGA+TGG 0.355752 2_2:+69356220 Msa0267650:CDS
CATTCTCTGGATTGGTGAAT+CGG 0.407829 2_2:-69355140 None:intergenic
AACCATGTGGTGGTTGACTT+TGG 0.415503 2_2:+69355057 Msa0267650:five_prime_UTR
TCCAGAGAATGATGTTAATA+CGG 0.428214 2_2:+69355152 Msa0267650:five_prime_UTR
CTAGTTCTTGGCAGTGTCAA+AGG 0.429450 2_2:+69355498 Msa0267650:intron
ATATGTAAATGAAACGATAT+CGG 0.432583 2_2:-69354970 None:intergenic
AGATATCCAGAAAATTATAA+TGG 0.438771 2_2:-69355609 None:intergenic
ATTAACATCATTCTCTGGAT+TGG 0.440029 2_2:-69355148 None:intergenic
AACATCCTGTGTGAACATAA+TGG 0.446340 2_2:-69355299 None:intergenic
CCCGTATTAACATCATTCTC+TGG 0.461431 2_2:-69355153 None:intergenic
CTGCAGATGATGATGACATC+AGG 0.461918 2_2:+69356186 Msa0267650:intron
TAGTTCTTGGCAGTGTCAAA+GGG 0.472596 2_2:+69355499 Msa0267650:intron
TGATTCTGATGTGGATAAAA+GGG 0.477448 2_2:+69355205 Msa0267650:five_prime_UTR
ATGGCCATGAGTATCTTTGT+AGG 0.493172 2_2:-69355280 None:intergenic
TGATGTGGATAAAAGGGAAT+GGG 0.494248 2_2:+69355211 Msa0267650:exon
CCAGAGAATGATGTTAATAC+GGG 0.496258 2_2:+69355153 Msa0267650:five_prime_UTR
CTGATGTGGATAAAAGGGAA+TGG 0.503803 2_2:+69355210 Msa0267650:exon
TGGAGTTCAAAGCTGGAGTA+AGG 0.508936 2_2:+69356240 Msa0267650:CDS
CTCCATCAAGGCTCTTGTAT+CGG 0.512255 2_2:-69356222 None:intergenic
GCCTTGATGGAGTTCAAAGC+TGG 0.517462 2_2:+69356233 Msa0267650:CDS
CAAAGGGGAAGGCGTGGAGA+TGG 0.519317 2_2:+69355515 Msa0267650:CDS
CTTAAGCTTTGATTCTGATG+TGG 0.524480 2_2:+69355196 Msa0267650:five_prime_UTR
GGGTTCGAATTCCATAAAAG+TGG 0.534911 2_2:+69355078 Msa0267650:five_prime_UTR
TCCAGCTTTGAACTCCATCA+AGG 0.536851 2_2:-69356234 None:intergenic
ATCTTGGGAAGCATGCCTAC+TGG 0.545900 2_2:+69355628 Msa0267650:CDS
GAAAGAGAAAAGTAGCATGA+TGG 0.558487 2_2:+69355113 Msa0267650:five_prime_UTR
CTTGGCAGTGTCAAAGGGGA+AGG 0.578073 2_2:+69355504 Msa0267650:CDS
GGAGATGGATCTTTCTATCG+TGG 0.608599 2_2:+69355530 Msa0267650:CDS
CAGTGTCAAAGGGGAAGGCG+TGG 0.616979 2_2:+69355509 Msa0267650:CDS
TATTCCTACAAAGATACTCA+TGG 0.630332 2_2:+69355276 Msa0267650:CDS
GAATACTTATAACTAAATGG+TGG 0.631665 2_2:-69355258 None:intergenic
ATCTCGAGGCTGAATATGTG+TGG 0.634545 2_2:+69354947 Msa0267650:five_prime_UTR
ACCCAAAGTCAACCACCACA+TGG 0.647342 2_2:-69355059 None:intergenic
AGTTCTTGGCAGTGTCAAAG+GGG 0.674918 2_2:+69355500 Msa0267650:intron
CAGAGAATGATGTTAATACG+GGG 0.686813 2_2:+69355154 Msa0267650:five_prime_UTR
CATGGCCATTATGTTCACAC+AGG 0.696824 2_2:+69355294 Msa0267650:CDS
AAATGAGTGGAACCATGTGG+TGG 0.743409 2_2:+69355047 Msa0267650:five_prime_UTR
AGAAAATGAGTGGAACCATG+TGG 0.752209 2_2:+69355044 Msa0267650:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAGAAAAAGTTAAAATT+CGG - chr2_2:69355480-69355499 None:intergenic 15.0%
!! AGAAAGAAAAAGTTAAAATT+CGG - chr2_2:69355480-69355499 None:intergenic 15.0%
!! ATATGTAAATGAAACGATAT+CGG - chr2_2:69354973-69354992 None:intergenic 20.0%
!! TAGGAATACTTATAACTAAA+TGG - chr2_2:69355264-69355283 None:intergenic 20.0%
!! AGATATCCAGAAAATTATAA+TGG - chr2_2:69355612-69355631 None:intergenic 20.0%
!!! TTATAATTTTCTGGATATCT+TGG + chr2_2:69355612-69355631 Msa0267650:CDS 20.0%
!!! TATAATTTTCTGGATATCTT+GGG + chr2_2:69355613-69355632 Msa0267650:CDS 20.0%
!! ATATGTAAATGAAACGATAT+CGG - chr2_2:69354973-69354992 None:intergenic 20.0%
!! TAGGAATACTTATAACTAAA+TGG - chr2_2:69355264-69355283 None:intergenic 20.0%
!! AGATATCCAGAAAATTATAA+TGG - chr2_2:69355612-69355631 None:intergenic 20.0%
!!! TTATAATTTTCTGGATATCT+TGG + chr2_2:69355612-69355631 Msa0267650:CDS 20.0%
!!! TATAATTTTCTGGATATCTT+GGG + chr2_2:69355613-69355632 Msa0267650:CDS 20.0%
! GAATACTTATAACTAAATGG+TGG - chr2_2:69355261-69355280 None:intergenic 25.0%
!!! AACTTTTTCTTTCTAGTTCT+TGG + chr2_2:69355486-69355505 Msa0267650:intron 25.0%
!! AAAACTGTTATTTGCAAAAC+AGG - chr2_2:69355586-69355605 None:intergenic 25.0%
!! GTTTTGCAAATAACAGTTTT+TGG + chr2_2:69355586-69355605 Msa0267650:CDS 25.0%
!! TTTTGGCCATTATAATTTTC+TGG + chr2_2:69355603-69355622 Msa0267650:CDS 25.0%
! TGAAATATGTGTTTCTTTGT+TGG + chr2_2:69355771-69355790 Msa0267650:intron 25.0%
! GAATACTTATAACTAAATGG+TGG - chr2_2:69355261-69355280 None:intergenic 25.0%
!!! AACTTTTTCTTTCTAGTTCT+TGG + chr2_2:69355486-69355505 Msa0267650:intron 25.0%
!! AAAACTGTTATTTGCAAAAC+AGG - chr2_2:69355586-69355605 None:intergenic 25.0%
!! GTTTTGCAAATAACAGTTTT+TGG + chr2_2:69355586-69355605 Msa0267650:CDS 25.0%
!! TTTTGGCCATTATAATTTTC+TGG + chr2_2:69355603-69355622 Msa0267650:CDS 25.0%
! TGAAATATGTGTTTCTTTGT+TGG + chr2_2:69355771-69355790 Msa0267650:intron 25.0%
! ATGGCAAAACATTTTTCTAC+AGG + chr2_2:69354923-69354942 Msa0267650:five_prime_UTR 30.0%
! TGGCAAAACATTTTTCTACA+GGG + chr2_2:69354924-69354943 Msa0267650:five_prime_UTR 30.0%
! TGAAAAATTCAATGATGACG+TGG + chr2_2:69355008-69355027 Msa0267650:five_prime_UTR 30.0%
! TACTTTTCTCTTTCAACACA+TGG - chr2_2:69355107-69355126 None:intergenic 30.0%
ATTAACATCATTCTCTGGAT+TGG - chr2_2:69355151-69355170 None:intergenic 30.0%
TCCAGAGAATGATGTTAATA+CGG + chr2_2:69355152-69355171 Msa0267650:five_prime_UTR 30.0%
TTGATTCTGATGTGGATAAA+AGG + chr2_2:69355204-69355223 Msa0267650:five_prime_UTR 30.0%
TGATTCTGATGTGGATAAAA+GGG + chr2_2:69355205-69355224 Msa0267650:five_prime_UTR 30.0%
!! AAATGGTGGATTCTTGAAAT+TGG - chr2_2:69355247-69355266 None:intergenic 30.0%
TATTCCTACAAAGATACTCA+TGG + chr2_2:69355276-69355295 Msa0267650:CDS 30.0%
! CATAGCAGAAATTCTTTTTG+AGG + chr2_2:69355842-69355861 Msa0267650:intron 30.0%
TCTGATGAAGTTAAAATCTC+TGG - chr2_2:69355993-69356012 None:intergenic 30.0%
! TTTAACTTCATCAGATTCAG+TGG + chr2_2:69355998-69356017 Msa0267650:intron 30.0%
ATCATCATCTGCAGAAAAAT+TGG - chr2_2:69356180-69356199 None:intergenic 30.0%
! ATGGCAAAACATTTTTCTAC+AGG + chr2_2:69354923-69354942 Msa0267650:five_prime_UTR 30.0%
! TGGCAAAACATTTTTCTACA+GGG + chr2_2:69354924-69354943 Msa0267650:five_prime_UTR 30.0%
! TGAAAAATTCAATGATGACG+TGG + chr2_2:69355008-69355027 Msa0267650:five_prime_UTR 30.0%
! TACTTTTCTCTTTCAACACA+TGG - chr2_2:69355107-69355126 None:intergenic 30.0%
ATTAACATCATTCTCTGGAT+TGG - chr2_2:69355151-69355170 None:intergenic 30.0%
TCCAGAGAATGATGTTAATA+CGG + chr2_2:69355152-69355171 Msa0267650:five_prime_UTR 30.0%
TTGATTCTGATGTGGATAAA+AGG + chr2_2:69355204-69355223 Msa0267650:five_prime_UTR 30.0%
TGATTCTGATGTGGATAAAA+GGG + chr2_2:69355205-69355224 Msa0267650:five_prime_UTR 30.0%
!! AAATGGTGGATTCTTGAAAT+TGG - chr2_2:69355247-69355266 None:intergenic 30.0%
TATTCCTACAAAGATACTCA+TGG + chr2_2:69355276-69355295 Msa0267650:CDS 30.0%
! CATAGCAGAAATTCTTTTTG+AGG + chr2_2:69355842-69355861 Msa0267650:intron 30.0%
TCTGATGAAGTTAAAATCTC+TGG - chr2_2:69355993-69356012 None:intergenic 30.0%
! TTTAACTTCATCAGATTCAG+TGG + chr2_2:69355998-69356017 Msa0267650:intron 30.0%
ATCATCATCTGCAGAAAAAT+TGG - chr2_2:69356180-69356199 None:intergenic 30.0%
!! CAGCACTTTTAGAAAATGAG+TGG + chr2_2:69355034-69355053 Msa0267650:five_prime_UTR 35.0%
!! ACACATGGATTCCACTTTTA+TGG - chr2_2:69355092-69355111 None:intergenic 35.0%
GAAAGAGAAAAGTAGCATGA+TGG + chr2_2:69355113-69355132 Msa0267650:five_prime_UTR 35.0%
CCAGAGAATGATGTTAATAC+GGG + chr2_2:69355153-69355172 Msa0267650:five_prime_UTR 35.0%
CAGAGAATGATGTTAATACG+GGG + chr2_2:69355154-69355173 Msa0267650:five_prime_UTR 35.0%
! CTTAAGCTTTGATTCTGATG+TGG + chr2_2:69355196-69355215 Msa0267650:five_prime_UTR 35.0%
TGATGTGGATAAAAGGGAAT+GGG + chr2_2:69355211-69355230 Msa0267650:exon 35.0%
AACATCCTGTGTGAACATAA+TGG - chr2_2:69355302-69355321 None:intergenic 35.0%
AGAATTTCTGCTATGTATGC+AGG - chr2_2:69355837-69355856 None:intergenic 35.0%
ACCTTCTTCGAGAAATTAGA+AGG + chr2_2:69355887-69355906 Msa0267650:intron 35.0%
TCCTTCTAATTTCTCGAAGA+AGG - chr2_2:69355891-69355910 None:intergenic 35.0%
TGTGAGGTCTAAATCTTTCA+AGG - chr2_2:69355954-69355973 None:intergenic 35.0%
! AAGTCCTACACTGTTTTCAA+AGG - chr2_2:69356083-69356102 None:intergenic 35.0%
TTCATGACAGTACACTATTC+AGG - chr2_2:69356137-69356156 None:intergenic 35.0%
!! CAGCACTTTTAGAAAATGAG+TGG + chr2_2:69355034-69355053 Msa0267650:five_prime_UTR 35.0%
!! ACACATGGATTCCACTTTTA+TGG - chr2_2:69355092-69355111 None:intergenic 35.0%
GAAAGAGAAAAGTAGCATGA+TGG + chr2_2:69355113-69355132 Msa0267650:five_prime_UTR 35.0%
CCAGAGAATGATGTTAATAC+GGG + chr2_2:69355153-69355172 Msa0267650:five_prime_UTR 35.0%
CAGAGAATGATGTTAATACG+GGG + chr2_2:69355154-69355173 Msa0267650:five_prime_UTR 35.0%
! CTTAAGCTTTGATTCTGATG+TGG + chr2_2:69355196-69355215 Msa0267650:five_prime_UTR 35.0%
TGATGTGGATAAAAGGGAAT+GGG + chr2_2:69355211-69355230 Msa0267650:exon 35.0%
AACATCCTGTGTGAACATAA+TGG - chr2_2:69355302-69355321 None:intergenic 35.0%
AGAATTTCTGCTATGTATGC+AGG - chr2_2:69355837-69355856 None:intergenic 35.0%
ACCTTCTTCGAGAAATTAGA+AGG + chr2_2:69355887-69355906 Msa0267650:intron 35.0%
TCCTTCTAATTTCTCGAAGA+AGG - chr2_2:69355891-69355910 None:intergenic 35.0%
TGTGAGGTCTAAATCTTTCA+AGG - chr2_2:69355954-69355973 None:intergenic 35.0%
! AAGTCCTACACTGTTTTCAA+AGG - chr2_2:69356083-69356102 None:intergenic 35.0%
TTCATGACAGTACACTATTC+AGG - chr2_2:69356137-69356156 None:intergenic 35.0%
! ATTTTTCTACAGGGATCTCG+AGG + chr2_2:69354933-69354952 Msa0267650:five_prime_UTR 40.0%
AGAAAATGAGTGGAACCATG+TGG + chr2_2:69355044-69355063 Msa0267650:five_prime_UTR 40.0%
GGGTTCGAATTCCATAAAAG+TGG + chr2_2:69355078-69355097 Msa0267650:five_prime_UTR 40.0%
!! CATTCTCTGGATTGGTGAAT+CGG - chr2_2:69355143-69355162 None:intergenic 40.0%
CCCGTATTAACATCATTCTC+TGG - chr2_2:69355156-69355175 None:intergenic 40.0%
CTGATGTGGATAAAAGGGAA+TGG + chr2_2:69355210-69355229 Msa0267650:exon 40.0%
ATGGCCATGAGTATCTTTGT+AGG - chr2_2:69355283-69355302 None:intergenic 40.0%
TAGTTCTTGGCAGTGTCAAA+GGG + chr2_2:69355499-69355518 Msa0267650:intron 40.0%
ATGTGTTTCTTTGTTGGCCA+AGG + chr2_2:69355777-69355796 Msa0267650:intron 40.0%
TAGAAGGATTCATCACGTGT+AGG + chr2_2:69355903-69355922 Msa0267650:intron 40.0%
CAGATTCAGTGGAATCTGTA+AGG + chr2_2:69356009-69356028 Msa0267650:intron 40.0%
ATAGCCTCTTCACTTAGACT+TGG - chr2_2:69356056-69356075 None:intergenic 40.0%
! GCAACCTTTGAAAACAGTGT+AGG + chr2_2:69356076-69356095 Msa0267650:intron 40.0%
CATCTGCAGAAAAATTGGAG+AGG - chr2_2:69356175-69356194 None:intergenic 40.0%
! ATTTTTCTACAGGGATCTCG+AGG + chr2_2:69354933-69354952 Msa0267650:five_prime_UTR 40.0%
AGAAAATGAGTGGAACCATG+TGG + chr2_2:69355044-69355063 Msa0267650:five_prime_UTR 40.0%
GGGTTCGAATTCCATAAAAG+TGG + chr2_2:69355078-69355097 Msa0267650:five_prime_UTR 40.0%
!! CATTCTCTGGATTGGTGAAT+CGG - chr2_2:69355143-69355162 None:intergenic 40.0%
CCCGTATTAACATCATTCTC+TGG - chr2_2:69355156-69355175 None:intergenic 40.0%
CTGATGTGGATAAAAGGGAA+TGG + chr2_2:69355210-69355229 Msa0267650:exon 40.0%
ATGGCCATGAGTATCTTTGT+AGG - chr2_2:69355283-69355302 None:intergenic 40.0%
TAGTTCTTGGCAGTGTCAAA+GGG + chr2_2:69355499-69355518 Msa0267650:intron 40.0%
ATGTGTTTCTTTGTTGGCCA+AGG + chr2_2:69355777-69355796 Msa0267650:intron 40.0%
TAGAAGGATTCATCACGTGT+AGG + chr2_2:69355903-69355922 Msa0267650:intron 40.0%
CAGATTCAGTGGAATCTGTA+AGG + chr2_2:69356009-69356028 Msa0267650:intron 40.0%
ATAGCCTCTTCACTTAGACT+TGG - chr2_2:69356056-69356075 None:intergenic 40.0%
! GCAACCTTTGAAAACAGTGT+AGG + chr2_2:69356076-69356095 Msa0267650:intron 40.0%
CATCTGCAGAAAAATTGGAG+AGG - chr2_2:69356175-69356194 None:intergenic 40.0%
ATCTCGAGGCTGAATATGTG+TGG + chr2_2:69354947-69354966 Msa0267650:five_prime_UTR 45.0%
AAATGAGTGGAACCATGTGG+TGG + chr2_2:69355047-69355066 Msa0267650:five_prime_UTR 45.0%
! AACCATGTGGTGGTTGACTT+TGG + chr2_2:69355057-69355076 Msa0267650:five_prime_UTR 45.0%
! ACCATGTGGTGGTTGACTTT+GGG + chr2_2:69355058-69355077 Msa0267650:five_prime_UTR 45.0%
CATGGCCATTATGTTCACAC+AGG + chr2_2:69355294-69355313 Msa0267650:CDS 45.0%
! CTAGTTCTTGGCAGTGTCAA+AGG + chr2_2:69355498-69355517 Msa0267650:intron 45.0%
AGTTCTTGGCAGTGTCAAAG+GGG + chr2_2:69355500-69355519 Msa0267650:intron 45.0%
GGAGATGGATCTTTCTATCG+TGG + chr2_2:69355530-69355549 Msa0267650:CDS 45.0%
ACAGAAAGAGACCTACCAGT+AGG - chr2_2:69355646-69355665 None:intergenic 45.0%
GTCTCTACTCTACTAGTGCA+CGG + chr2_2:69355710-69355729 Msa0267650:intron 45.0%
CATGTCCAACTCTTTCACCT+TGG - chr2_2:69355797-69355816 None:intergenic 45.0%
!! TGTAGGAGCATTCCCTCAAA+AGG + chr2_2:69355920-69355939 Msa0267650:intron 45.0%
! AAGGATGTGCAGCCTTTTGA+GGG - chr2_2:69355935-69355954 None:intergenic 45.0%
! TGTATGCAGCAAGAAGTGTG+AGG - chr2_2:69355970-69355989 None:intergenic 45.0%
TGCTCCAAGTCTAAGTGAAG+AGG + chr2_2:69356049-69356068 Msa0267650:intron 45.0%
! CTGCAGATGATGATGACATC+AGG + chr2_2:69356186-69356205 Msa0267650:intron 45.0%
CTCCATCAAGGCTCTTGTAT+CGG - chr2_2:69356225-69356244 None:intergenic 45.0%
!! TCCAGCTTTGAACTCCATCA+AGG - chr2_2:69356237-69356256 None:intergenic 45.0%
TGGAGTTCAAAGCTGGAGTA+AGG + chr2_2:69356240-69356259 Msa0267650:CDS 45.0%
ATCTCGAGGCTGAATATGTG+TGG + chr2_2:69354947-69354966 Msa0267650:five_prime_UTR 45.0%
AAATGAGTGGAACCATGTGG+TGG + chr2_2:69355047-69355066 Msa0267650:five_prime_UTR 45.0%
! AACCATGTGGTGGTTGACTT+TGG + chr2_2:69355057-69355076 Msa0267650:five_prime_UTR 45.0%
! ACCATGTGGTGGTTGACTTT+GGG + chr2_2:69355058-69355077 Msa0267650:five_prime_UTR 45.0%
CATGGCCATTATGTTCACAC+AGG + chr2_2:69355294-69355313 Msa0267650:CDS 45.0%
! CTAGTTCTTGGCAGTGTCAA+AGG + chr2_2:69355498-69355517 Msa0267650:intron 45.0%
AGTTCTTGGCAGTGTCAAAG+GGG + chr2_2:69355500-69355519 Msa0267650:intron 45.0%
GGAGATGGATCTTTCTATCG+TGG + chr2_2:69355530-69355549 Msa0267650:CDS 45.0%
ACAGAAAGAGACCTACCAGT+AGG - chr2_2:69355646-69355665 None:intergenic 45.0%
GTCTCTACTCTACTAGTGCA+CGG + chr2_2:69355710-69355729 Msa0267650:intron 45.0%
CATGTCCAACTCTTTCACCT+TGG - chr2_2:69355797-69355816 None:intergenic 45.0%
!! TGTAGGAGCATTCCCTCAAA+AGG + chr2_2:69355920-69355939 Msa0267650:intron 45.0%
! AAGGATGTGCAGCCTTTTGA+GGG - chr2_2:69355935-69355954 None:intergenic 45.0%
! TGTATGCAGCAAGAAGTGTG+AGG - chr2_2:69355970-69355989 None:intergenic 45.0%
TGCTCCAAGTCTAAGTGAAG+AGG + chr2_2:69356049-69356068 Msa0267650:intron 45.0%
! CTGCAGATGATGATGACATC+AGG + chr2_2:69356186-69356205 Msa0267650:intron 45.0%
CTCCATCAAGGCTCTTGTAT+CGG - chr2_2:69356225-69356244 None:intergenic 45.0%
!! TCCAGCTTTGAACTCCATCA+AGG - chr2_2:69356237-69356256 None:intergenic 45.0%
TGGAGTTCAAAGCTGGAGTA+AGG + chr2_2:69356240-69356259 Msa0267650:CDS 45.0%
ACCCAAAGTCAACCACCACA+TGG - chr2_2:69355062-69355081 None:intergenic 50.0%
! ATCTTGGGAAGCATGCCTAC+TGG + chr2_2:69355628-69355647 Msa0267650:CDS 50.0%
GTTGGCCAAGGTGAAAGAGT+TGG + chr2_2:69355789-69355808 Msa0267650:intron 50.0%
! CAAGGATGTGCAGCCTTTTG+AGG - chr2_2:69355936-69355955 None:intergenic 50.0%
CACCGATACAAGAGCCTTGA+TGG + chr2_2:69356220-69356239 Msa0267650:CDS 50.0%
GCCTTGATGGAGTTCAAAGC+TGG + chr2_2:69356233-69356252 Msa0267650:CDS 50.0%
ACCCAAAGTCAACCACCACA+TGG - chr2_2:69355062-69355081 None:intergenic 50.0%
! ATCTTGGGAAGCATGCCTAC+TGG + chr2_2:69355628-69355647 Msa0267650:CDS 50.0%
GTTGGCCAAGGTGAAAGAGT+TGG + chr2_2:69355789-69355808 Msa0267650:intron 50.0%
! CAAGGATGTGCAGCCTTTTG+AGG - chr2_2:69355936-69355955 None:intergenic 50.0%
CACCGATACAAGAGCCTTGA+TGG + chr2_2:69356220-69356239 Msa0267650:CDS 50.0%
GCCTTGATGGAGTTCAAAGC+TGG + chr2_2:69356233-69356252 Msa0267650:CDS 50.0%
CTTGGCAGTGTCAAAGGGGA+AGG + chr2_2:69355504-69355523 Msa0267650:CDS 55.0%
! TGGGAAGCATGCCTACTGGT+AGG + chr2_2:69355632-69355651 Msa0267650:intron 55.0%
CTTGGCAGTGTCAAAGGGGA+AGG + chr2_2:69355504-69355523 Msa0267650:CDS 55.0%
! TGGGAAGCATGCCTACTGGT+AGG + chr2_2:69355632-69355651 Msa0267650:intron 55.0%
CAGTGTCAAAGGGGAAGGCG+TGG + chr2_2:69355509-69355528 Msa0267650:CDS 60.0%
! CAAAGGGGAAGGCGTGGAGA+TGG + chr2_2:69355515-69355534 Msa0267650:CDS 60.0%
CAGTGTCAAAGGGGAAGGCG+TGG + chr2_2:69355509-69355528 Msa0267650:CDS 60.0%
! CAAAGGGGAAGGCGTGGAGA+TGG + chr2_2:69355515-69355534 Msa0267650:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 69354923 69356277 69354923 ID=Msa0267650;Name=Msa0267650
chr2_2 mRNA 69354923 69356277 69354923 ID=Msa0267650-mRNA-1;Parent=Msa0267650;Name=Msa0267650-mRNA-1;_AED=0.27;_eAED=0.37;_QI=306|0.5|0.66|1|0.5|0.66|3|0|110
chr2_2 exon 69354923 69355324 69354923 ID=Msa0267650-mRNA-1:exon:22104;Parent=Msa0267650-mRNA-1
chr2_2 exon 69355502 69355649 69355502 ID=Msa0267650-mRNA-1:exon:22105;Parent=Msa0267650-mRNA-1
chr2_2 exon 69356192 69356277 69356192 ID=Msa0267650-mRNA-1:exon:22106;Parent=Msa0267650-mRNA-1
chr2_2 five_prime_UTR 69354923 69355228 69354923 ID=Msa0267650-mRNA-1:five_prime_utr;Parent=Msa0267650-mRNA-1
chr2_2 CDS 69355229 69355324 69355229 ID=Msa0267650-mRNA-1:cds;Parent=Msa0267650-mRNA-1
chr2_2 CDS 69355502 69355649 69355502 ID=Msa0267650-mRNA-1:cds;Parent=Msa0267650-mRNA-1
chr2_2 CDS 69356192 69356277 69356192 ID=Msa0267650-mRNA-1:cds;Parent=Msa0267650-mRNA-1
Gene Sequence

>Msa0267650

ATGGGATCAACTCTACCAATTTCAAGAATCCACCATTTAGTTATAAGTATTCCTACAAAGATACTCATGGCCATTATGTTCACACAGGATGTTGATTTCTTGGCAGTGTCAAAGGGGAAGGCGTGGAGATGGATCTTTCTATCGTGGTTGCGCAGAAGTTGCTGTGTTTGTCTGCATCCTGTTTTGCAAATAACAGTTTTTGGCCATTATAATTTTCTGGATATCTTGGGAAGCATGCCTACTGATGATGATGACATCAGGAGAAATGTGAACACCGATACAAGAGCCTTGATGGAGTTCAAAGCTGGAGTAAGGACTAAAATGAATCAA
Protein sequence

>Msa0267650

MGSTLPISRIHHLVISIPTKILMAIMFTQDVDFLAVSKGKAWRWIFLSWLRRSCCVCLHPVLQITVFGHYNFLDILGSMPTDDDDIRRNVNTDTRALMEFKAGVRTKMNQ