Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274580 | XP_013462571.1 | 96.327 | 245 | 6 | 1 | 1 | 245 | 1 | 242 | 4.70e-173 | 486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274580 | sp|Q9SJI9|PCO4_ARATH | 56.735 | 245 | 100 | 3 | 1 | 244 | 1 | 240 | 5.16e-95 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274580 | G7ZXJ8 | 96.327 | 245 | 6 | 1 | 1 | 245 | 1 | 242 | 2.25e-173 | 486 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0193590 | Msa0274580 | 0.930286 | 2.042982e-93 | -8.615850e-47 |
| Msa0274580 | Msa1368170 | 0.822151 | 2.761364e-53 | -8.615850e-47 |
| Msa0274580 | Msa1385570 | 0.817143 | 3.841197e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274580 | MtrunA17_Chr2g0283961 | 96.327 | 245 | 6 | 1 | 1 | 245 | 1 | 242 | 4.33e-177 | 486 |
| Msa0274580 | MtrunA17_Chr4g0041281 | 59.184 | 245 | 92 | 4 | 1 | 244 | 1 | 238 | 1.72e-102 | 297 |
| Msa0274580 | MtrunA17_Chr2g0320221 | 55.967 | 243 | 99 | 3 | 3 | 245 | 4 | 238 | 8.64e-98 | 285 |
| Msa0274580 | MtrunA17_Chr2g0307681 | 40.927 | 259 | 119 | 8 | 4 | 244 | 28 | 270 | 7.09e-56 | 179 |
| Msa0274580 | MtrunA17_Chr6g0452941 | 39.147 | 258 | 123 | 10 | 1 | 243 | 38 | 276 | 1.42e-55 | 179 |
| Msa0274580 | MtrunA17_Chr7g0216881 | 40.000 | 240 | 115 | 9 | 4 | 233 | 45 | 265 | 1.17e-53 | 174 |
| Msa0274580 | MtrunA17_Chr7g0253891 | 37.143 | 245 | 136 | 6 | 4 | 243 | 47 | 278 | 5.44e-49 | 162 |
| Msa0274580 | MtrunA17_Chr6g0460971 | 38.057 | 247 | 130 | 7 | 4 | 243 | 58 | 288 | 3.03e-48 | 160 |
| Msa0274580 | MtrunA17_Chr5g0426531 | 37.959 | 245 | 133 | 7 | 1 | 243 | 3 | 230 | 1.04e-47 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274580 | AT2G42670.1 | 56.735 | 245 | 100 | 3 | 1 | 244 | 1 | 240 | 5.25e-96 | 281 |
| Msa0274580 | AT2G42670.2 | 57.895 | 247 | 95 | 5 | 1 | 244 | 1 | 241 | 1.19e-95 | 280 |
| Msa0274580 | AT3G58670.2 | 56.680 | 247 | 100 | 4 | 1 | 245 | 1 | 242 | 6.45e-93 | 273 |
| Msa0274580 | AT3G58670.3 | 56.680 | 247 | 100 | 4 | 1 | 245 | 1 | 242 | 6.45e-93 | 273 |
| Msa0274580 | AT3G58670.1 | 56.680 | 247 | 100 | 4 | 1 | 245 | 1 | 242 | 6.45e-93 | 273 |
| Msa0274580 | AT3G58670.4 | 54.902 | 204 | 86 | 3 | 43 | 245 | 1 | 199 | 3.40e-71 | 216 |
| Msa0274580 | AT2G42670.3 | 57.669 | 163 | 63 | 3 | 84 | 244 | 15 | 173 | 1.34e-58 | 184 |
| Msa0274580 | AT1G18490.1 | 40.000 | 255 | 135 | 7 | 2 | 244 | 33 | 281 | 3.86e-57 | 184 |
| Msa0274580 | AT5G15120.1 | 39.841 | 251 | 125 | 9 | 4 | 244 | 58 | 292 | 1.16e-53 | 175 |
| Msa0274580 | AT5G39890.1 | 38.889 | 252 | 120 | 10 | 4 | 244 | 47 | 275 | 1.46e-51 | 169 |
| Msa0274580 | AT5G39890.2 | 41.414 | 198 | 94 | 6 | 4 | 197 | 47 | 226 | 1.21e-48 | 160 |
Find 98 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTACCTGGTTGGAACATTT+TGG | 0.149681 | 2_3:-6411136 | Msa0274580:three_prime_UTR |
| TAGCGACCTGAGTGATATTT+TGG | 0.166787 | 2_3:-6413923 | Msa0274580:five_prime_UTR |
| CCGCCTAGCGATTTGATTAT+TGG | 0.191711 | 2_3:-6411248 | Msa0274580:CDS |
| CAACAATTCTTTATCCAAAT+AGG | 0.216030 | 2_3:-6411576 | Msa0274580:CDS |
| TTGCTTAAAACAGTCATTCT+AGG | 0.237625 | 2_3:+6413126 | None:intergenic |
| TGGAGGTTGCCATCCCTATT+TGG | 0.251310 | 2_3:+6411562 | None:intergenic |
| CTCCTTCATCGCCGAATATT+AGG | 0.252891 | 2_3:+6411206 | None:intergenic |
| TCGAGAGCCTCTTCTGAAAT+AGG | 0.276585 | 2_3:+6413762 | None:intergenic |
| TGATTGTAGATACTGTTTAT+TGG | 0.281270 | 2_3:-6414026 | Msa0274580:intron |
| TTATGCTGAACATAGTTCTA+TGG | 0.298522 | 2_3:-6410903 | Msa0274580:three_prime_UTR |
| CGCCTAGCGATTTGATTATT+GGG | 0.306512 | 2_3:-6411247 | Msa0274580:CDS |
| CATAATAATTCACATGTCTA+AGG | 0.329473 | 2_3:+6410962 | None:intergenic |
| AACAATTCTTTATCCAAATA+GGG | 0.329524 | 2_3:-6411575 | Msa0274580:CDS |
| CGTTCTATGAATGGTGGAAA+TGG | 0.336983 | 2_3:-6413418 | Msa0274580:CDS |
| CCTCATGGTCAAGACCGATA+TGG | 0.337653 | 2_3:+6413464 | None:intergenic |
| TCATACAATTTCTGAATATA+CGG | 0.350667 | 2_3:+6413816 | None:intergenic |
| TGCATGTGAAATCATTTGAT+TGG | 0.380621 | 2_3:-6413086 | Msa0274580:CDS |
| TCCTTCATCGCCGAATATTA+GGG | 0.388366 | 2_3:+6411207 | None:intergenic |
| TCTTGACCATGAGGCGCAAC+TGG | 0.389250 | 2_3:-6413455 | Msa0274580:CDS |
| TGCAGGTGAATGTACTTAAT+AGG | 0.393225 | 2_3:+6413370 | None:intergenic |
| AATGGTGGAAATGGGAGAAT+TGG | 0.401520 | 2_3:-6413409 | Msa0274580:CDS |
| AAATAGTTTATCTTTCTGTT+TGG | 0.406108 | 2_3:-6411113 | Msa0274580:three_prime_UTR |
| GTTTATCTTTCTGTTTGGTA+TGG | 0.406508 | 2_3:-6411108 | Msa0274580:three_prime_UTR |
| ACTTCTTCTTCCAATGAGTA+AGG | 0.411350 | 2_3:+6411490 | None:intergenic |
| TCCAATAAAACAACGAAACT+TGG | 0.417563 | 2_3:+6413898 | None:intergenic |
| AATACAGAGGCCCTAATATT+CGG | 0.418183 | 2_3:-6411217 | Msa0274580:CDS |
| GAAGAGAGCACAAGGGGTTA+TGG | 0.418395 | 2_3:+6411528 | None:intergenic |
| TCTTACCCCTCCTTACTCAT+TGG | 0.421294 | 2_3:-6411500 | Msa0274580:CDS |
| TCATTGGAAGAAGAAGTAAA+TGG | 0.431171 | 2_3:-6411484 | Msa0274580:CDS |
| GCGATTTGATTATTGGGAAT+GGG | 0.433631 | 2_3:-6411241 | Msa0274580:CDS |
| GAGAGACACGAGAAGAGAAC+AGG | 0.439228 | 2_3:+6414424 | None:intergenic |
| AGGCGCAACTGGCGCGAAGT+TGG | 0.440265 | 2_3:-6413444 | Msa0274580:CDS |
| AGCATTCTTAAAGCGACATC+AGG | 0.442765 | 2_3:-6414501 | None:intergenic |
| GTTCTTATACAGCATTGGTC+AGG | 0.453478 | 2_3:-6411172 | Msa0274580:three_prime_UTR |
| TTATGACTTTCTTATTTGGA+TGG | 0.456534 | 2_3:-6410927 | Msa0274580:intron |
| CTCATGGTCAAGACCGATAT+GGG | 0.462946 | 2_3:+6413465 | None:intergenic |
| GGAGTATTCTGTATGTCTCC+TGG | 0.463962 | 2_3:-6413174 | Msa0274580:CDS |
| AGCGATTTGATTATTGGGAA+TGG | 0.467999 | 2_3:-6411242 | Msa0274580:CDS |
| GCCCTAATATTCGGCGATGA+AGG | 0.480072 | 2_3:-6411208 | Msa0274580:exon |
| GTTCTATGAATGGTGGAAAT+GGG | 0.481808 | 2_3:-6413417 | Msa0274580:CDS |
| TTGTTGTCTGTCTCTCACTC+TGG | 0.484116 | 2_3:-6414453 | Msa0274580:five_prime_UTR |
| TCGCTGAGGACAGATCTTCC+AGG | 0.485093 | 2_3:-6411436 | Msa0274580:intron |
| GGATCAGATTGTACCTAAAA+CGG | 0.487386 | 2_3:+6413728 | None:intergenic |
| CATTTGTTCTTATACAGCAT+TGG | 0.493867 | 2_3:-6411177 | Msa0274580:three_prime_UTR |
| TTCGCGCCAGTTGCGCCTCA+TGG | 0.497055 | 2_3:+6413449 | None:intergenic |
| GGGTTGAAGCCTTCCCATAT+CGG | 0.497687 | 2_3:-6413478 | Msa0274580:CDS |
| GGGTTATGGCTTTGAAGCAA+TGG | 0.504823 | 2_3:+6411542 | None:intergenic |
| GACAAGAAACTTTACCTGGT+TGG | 0.505996 | 2_3:-6411146 | Msa0274580:three_prime_UTR |
| GCCGCAGTTATAATCTAGAA+AGG | 0.512137 | 2_3:+6411014 | None:intergenic |
| TACTTAATAGGAGGACCCTC+AGG | 0.529570 | 2_3:+6413382 | None:intergenic |
| CTTCTTCCAATGAGTAAGGA+GGG | 0.529744 | 2_3:+6411494 | None:intergenic |
| AGTTGGAAACGTTCTATGAA+TGG | 0.544207 | 2_3:-6413427 | Msa0274580:CDS |
| GTACAGACTATGATAAATGC+TGG | 0.547329 | 2_3:-6411072 | Msa0274580:three_prime_UTR |
| AAGGCTTCCTTGTCCACTGA+GGG | 0.547680 | 2_3:-6413786 | Msa0274580:CDS |
| CCCTTTCTAGATTATAACTG+CGG | 0.551621 | 2_3:-6411015 | Msa0274580:three_prime_UTR |
| CCGCAGTTATAATCTAGAAA+GGG | 0.553612 | 2_3:+6411015 | None:intergenic |
| AGATTGTACCTAAAACGGTT+CGG | 0.560671 | 2_3:+6413733 | None:intergenic |
| ATTCTTTATCCAAATAGGGA+TGG | 0.561052 | 2_3:-6411571 | Msa0274580:CDS |
| AATAGGTCCCTCAGTGGACA+AGG | 0.564467 | 2_3:+6413779 | None:intergenic |
| TTCTTCCAATGAGTAAGGAG+GGG | 0.571850 | 2_3:+6411495 | None:intergenic |
| GCTTGACAAGAAACTTTACC+TGG | 0.580353 | 2_3:-6411150 | Msa0274580:three_prime_UTR |
| TCTTCTTCCAATGAGTAAGG+AGG | 0.590223 | 2_3:+6411493 | None:intergenic |
| GATCTGTCCTCAGCGACTTG+CGG | 0.591770 | 2_3:+6411443 | None:intergenic |
| TAGTGCTTGAGGAGCTGCAC+GGG | 0.593482 | 2_3:-6411310 | Msa0274580:CDS |
| TTATGGCTTTGAAGCAATGG+AGG | 0.594826 | 2_3:+6411545 | None:intergenic |
| ATAATCAAATCGCTAGGCGG+CGG | 0.595756 | 2_3:+6411251 | None:intergenic |
| TGGAAACGTTCTATGAATGG+TGG | 0.597235 | 2_3:-6413424 | Msa0274580:CDS |
| AGAACTTGTCACATTCGTGC+AGG | 0.604310 | 2_3:+6413353 | None:intergenic |
| TCTAGATTATAACTGCGGCA+TGG | 0.605968 | 2_3:-6411010 | Msa0274580:three_prime_UTR |
| GGGAGAATTGGAACTCCTGA+GGG | 0.606282 | 2_3:-6413397 | Msa0274580:CDS |
| TGAAGCGGAATCAAAGAACC+AGG | 0.610487 | 2_3:+6413156 | None:intergenic |
| TAAAGAATTGTTGTGTCACA+AGG | 0.613761 | 2_3:+6411586 | None:intergenic |
| TGAGGGACCTATTTCAGAAG+AGG | 0.616721 | 2_3:-6413769 | Msa0274580:CDS |
| GAGTGTAATACGTGAAACAT+TGG | 0.616799 | 2_3:+6414356 | None:intergenic |
| CAAGGCTTCCTTGTCCACTG+AGG | 0.617584 | 2_3:-6413787 | Msa0274580:CDS |
| TGGGATAGATCGCATGACGC+AGG | 0.625663 | 2_3:+6413054 | None:intergenic |
| GAAATTGTATGACGTCTGCA+AGG | 0.625999 | 2_3:-6413805 | Msa0274580:CDS |
| CCATATCGGTCTTGACCATG+AGG | 0.628240 | 2_3:-6413464 | Msa0274580:CDS |
| TGGGAGAATTGGAACTCCTG+AGG | 0.629926 | 2_3:-6413398 | Msa0274580:CDS |
| TTCCCAATAATCAAATCGCT+AGG | 0.630049 | 2_3:+6411245 | None:intergenic |
| AGAATGTCGAAGAGAGCACA+AGG | 0.630272 | 2_3:+6411520 | None:intergenic |
| TGGTCAAGACCGATATGGGA+AGG | 0.630545 | 2_3:+6413469 | None:intergenic |
| TTGGATCCAAAATATCACTC+AGG | 0.630608 | 2_3:+6413917 | None:intergenic |
| ATTTCCAAAATGTTCCAACC+AGG | 0.631923 | 2_3:+6411132 | None:intergenic |
| TGAGTTCATCTGAAATCACC+TGG | 0.632126 | 2_3:-6411286 | Msa0274580:CDS |
| GTAATACGTGAAACATTGGT+TGG | 0.643893 | 2_3:+6414360 | None:intergenic |
| CTTATTTCCGCAAGTCGCTG+AGG | 0.643960 | 2_3:-6411450 | Msa0274580:CDS |
| GCGTCATGCGATCTATCCCA+AGG | 0.645133 | 2_3:-6413051 | Msa0274580:intron |
| AGGTGAATGTACTTAATAGG+AGG | 0.647213 | 2_3:+6413373 | None:intergenic |
| GAAAGGGAAAACTAGAAACA+TGG | 0.648369 | 2_3:+6411031 | None:intergenic |
| AATGTCGAAGAGAGCACAAG+GGG | 0.652144 | 2_3:+6411522 | None:intergenic |
| CCAATAATCAAATCGCTAGG+CGG | 0.653004 | 2_3:+6411248 | None:intergenic |
| ATTGGGAATGGGCAATACAG+AGG | 0.655488 | 2_3:-6411230 | Msa0274580:CDS |
| ATTCTAGGATGATCATGAAG+CGG | 0.655662 | 2_3:+6413141 | None:intergenic |
| GTAGTGCTTGAGGAGCTGCA+CGG | 0.676084 | 2_3:-6411311 | Msa0274580:intron |
| TTCTGAAATAGGTCCCTCAG+TGG | 0.690477 | 2_3:+6413773 | None:intergenic |
| AGAGAGTCACGACATAATCG+AGG | 0.708621 | 2_3:+6414389 | None:intergenic |
| GAATGTCGAAGAGAGCACAA+GGG | 0.743522 | 2_3:+6411521 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAAAGATATAATGAAAT+GGG | + | chr2_3:6411092-6411111 | None:intergenic | 15.0% |
| !! | AATTGAAAGATATAATGAAA+TGG | + | chr2_3:6411093-6411112 | None:intergenic | 15.0% |
| !!! | ATTTTCAATATATGAAACTT+GGG | - | chr2_3:6411146-6411165 | Msa0274580:three_prime_UTR | 15.0% |
| !! | AAAACAACAAAAATGAAAAT+GGG | + | chr2_3:6411200-6411219 | None:intergenic | 15.0% |
| !! | AAAAACAACAAAAATGAAAA+TGG | + | chr2_3:6411201-6411220 | None:intergenic | 15.0% |
| !! | AATCATAAGTAAATACAATA+AGG | + | chr2_3:6412362-6412381 | None:intergenic | 15.0% |
| !!! | AATTTTGAATTTAACTTTTG+TGG | + | chr2_3:6413715-6413734 | None:intergenic | 15.0% |
| !! | ATTATTATGACTTTCTTATT+TGG | - | chr2_3:6414449-6414468 | Msa0274580:five_prime_UTR | 15.0% |
| !! | TTGAAAGATATAATGAAATG+GGG | + | chr2_3:6411091-6411110 | None:intergenic | 20.0% |
| !!! | GATTTTCAATATATGAAACT+TGG | - | chr2_3:6411145-6411164 | Msa0274580:three_prime_UTR | 20.0% |
| !!! | AACTTGCAAGTTTTTTTTTA+TGG | - | chr2_3:6411267-6411286 | Msa0274580:CDS | 20.0% |
| !! | TCATACAATTTCTGAATATA+CGG | + | chr2_3:6411567-6411586 | None:intergenic | 20.0% |
| !! | ACAAATTCAACAAAAAACAA+AGG | + | chr2_3:6411676-6411695 | None:intergenic | 20.0% |
| !! | ATACAGTTCACATTAAAATT+CGG | + | chr2_3:6411755-6411774 | None:intergenic | 20.0% |
| !!! | TATACTGTAATGTTTGATTT+GGG | - | chr2_3:6411772-6411791 | Msa0274580:intron | 20.0% |
| !! | GTTAATACTCTAAATGAATT+TGG | - | chr2_3:6412099-6412118 | Msa0274580:intron | 20.0% |
| !!! | GATTTTGAAATATAGAAAAG+GGG | + | chr2_3:6412634-6412653 | None:intergenic | 20.0% |
| !!! | GGATTTTGAAATATAGAAAA+GGG | + | chr2_3:6412635-6412654 | None:intergenic | 20.0% |
| !!! | TGGATTTTGAAATATAGAAA+AGG | + | chr2_3:6412636-6412655 | None:intergenic | 20.0% |
| !!! | AAACGTATTTTTTCTGTAAA+CGG | + | chr2_3:6412709-6412728 | None:intergenic | 20.0% |
| !!! | CTAATTTTTAGTTGGAATTA+AGG | - | chr2_3:6412732-6412751 | Msa0274580:intron | 20.0% |
| !!! | TTTTGTTCTTTTAAGCAAAA+TGG | - | chr2_3:6412828-6412847 | Msa0274580:intron | 20.0% |
| !! | AAAATATATCTTATCAAAGC+AGG | + | chr2_3:6413483-6413502 | None:intergenic | 20.0% |
| !! | TAAGTTAAGATACATCAATA+TGG | + | chr2_3:6413611-6413630 | None:intergenic | 20.0% |
| !! | AACAATTCTTTATCCAAATA+GGG | - | chr2_3:6413805-6413824 | Msa0274580:CDS | 20.0% |
| !! | AAAATAATGAGAGATTTAGA+AGG | + | chr2_3:6413982-6414001 | None:intergenic | 20.0% |
| !! | AAATAGTTTATCTTTCTGTT+TGG | - | chr2_3:6414267-6414286 | Msa0274580:intron | 20.0% |
| !!! | GAACTTTGAACTGATTTTAT+TGG | - | chr2_3:6411293-6411312 | Msa0274580:CDS | 25.0% |
| ! | TGATTGTAGATACTGTTTAT+TGG | - | chr2_3:6411354-6411373 | Msa0274580:intron | 25.0% |
| ! | GTATACTGTAATGTTTGATT+TGG | - | chr2_3:6411771-6411790 | Msa0274580:intron | 25.0% |
| ! | GCAGTTTATAAAAGGTTAAA+AGG | + | chr2_3:6411867-6411886 | None:intergenic | 25.0% |
| !!! | TTGTTTTGAACACTGAATTT+TGG | - | chr2_3:6412130-6412149 | Msa0274580:intron | 25.0% |
| !! | ACTGAATTTTGGATTCAAAT+GGG | - | chr2_3:6412141-6412160 | Msa0274580:intron | 25.0% |
| !!! | TTGTTTTTGTTTTTGCAGAT+TGG | - | chr2_3:6412185-6412204 | Msa0274580:intron | 25.0% |
| !! | TATAATTTGGCTTCATTAAC+AGG | - | chr2_3:6412608-6412627 | Msa0274580:intron | 25.0% |
| ! | AAACATAGCAATGTGATTTA+TGG | + | chr2_3:6412656-6412675 | None:intergenic | 25.0% |
| !!! | CGTTTTTGCTAATTTTTAGT+TGG | - | chr2_3:6412724-6412743 | Msa0274580:intron | 25.0% |
| ! | AAGAACAAAACAGAAAAAGA+AGG | + | chr2_3:6412818-6412837 | None:intergenic | 25.0% |
| !! | TTGATGTTAATTTCAAGTCA+AGG | + | chr2_3:6412891-6412910 | None:intergenic | 25.0% |
| ! | AACACTTGAAACTATTGTAT+GGG | + | chr2_3:6413255-6413274 | None:intergenic | 25.0% |
| ! | AAACACTTGAAACTATTGTA+TGG | + | chr2_3:6413256-6413275 | None:intergenic | 25.0% |
| !!! | GAATTTAACTTTTGTGGTTT+AGG | + | chr2_3:6413709-6413728 | None:intergenic | 25.0% |
| ! | CAACAATTCTTTATCCAAAT+AGG | - | chr2_3:6413804-6413823 | Msa0274580:CDS | 25.0% |
| ! | CATAATAATTCACATGTCTA+AGG | + | chr2_3:6414421-6414440 | None:intergenic | 25.0% |
| !! | TTATGACTTTCTTATTTGGA+TGG | - | chr2_3:6414453-6414472 | Msa0274580:five_prime_UTR | 25.0% |
| CAATATATGAAACTTGGGTA+TGG | - | chr2_3:6411151-6411170 | Msa0274580:three_prime_UTR | 30.0% | |
| !!! | GTTTCTTTTGCTGTTTTGAT+TGG | - | chr2_3:6411430-6411449 | Msa0274580:intron | 30.0% |
| !! | TCCAAGTTTCGTTGTTTTAT+TGG | - | chr2_3:6411481-6411500 | Msa0274580:CDS | 30.0% |
| TCCAATAAAACAACGAAACT+TGG | + | chr2_3:6411485-6411504 | None:intergenic | 30.0% | |
| TGTCCTTATTGTTATAGTGA+CGG | - | chr2_3:6411824-6411843 | Msa0274580:intron | 30.0% | |
| ! | CACTGAATTTTGGATTCAAA+TGG | - | chr2_3:6412140-6412159 | Msa0274580:intron | 30.0% |
| TTGCTTAAAACAGTCATTCT+AGG | + | chr2_3:6412257-6412276 | None:intergenic | 30.0% | |
| !! | TAGAATGACTGTTTTAAGCA+AGG | - | chr2_3:6412256-6412275 | Msa0274580:intron | 30.0% |
| TGCATGTGAAATCATTTGAT+TGG | - | chr2_3:6412294-6412313 | Msa0274580:intron | 30.0% | |
| TTGTTGATATTGTGGACAAA+TGG | - | chr2_3:6412433-6412452 | Msa0274580:intron | 30.0% | |
| TGTTGATATTGTGGACAAAT+GGG | - | chr2_3:6412434-6412453 | Msa0274580:intron | 30.0% | |
| ! | AGGTTTTTGAACCGTTATTA+CGG | + | chr2_3:6412470-6412489 | None:intergenic | 30.0% |
| GTTCAAAAACCTAGACATTA+TGG | - | chr2_3:6412478-6412497 | Msa0274580:intron | 30.0% | |
| !!! | ACATGCGAGGTTTTAAATTA+TGG | + | chr2_3:6412516-6412535 | None:intergenic | 30.0% |
| ! | ACTACATGTAGATTAGCTAT+AGG | - | chr2_3:6412575-6412594 | Msa0274580:intron | 30.0% |
| !! | TTTTAGGTGGAGTAAGATTT+GGG | - | chr2_3:6412792-6412811 | Msa0274580:intron | 30.0% |
| CTTGAAATTAACATCAACAG+AGG | - | chr2_3:6412894-6412913 | Msa0274580:intron | 30.0% | |
| TGGAGACATGTTAAACTATT+GGG | + | chr2_3:6412943-6412962 | None:intergenic | 30.0% | |
| TTCTCCAACAATTTATCTAG+TGG | + | chr2_3:6412963-6412982 | None:intergenic | 30.0% | |
| CGTTGAAATCGATATCTATT+AGG | - | chr2_3:6413096-6413115 | Msa0274580:CDS | 30.0% | |
| ATAGAATGCTATGATTTGAG+TGG | - | chr2_3:6413123-6413142 | Msa0274580:CDS | 30.0% | |
| !! | TTTTGCTAAGTTTTTTGACG+AGG | - | chr2_3:6413198-6413217 | Msa0274580:intron | 30.0% |
| !! | TGGTCTAATGGATGTTATTT+TGG | - | chr2_3:6413526-6413545 | Msa0274580:intron | 30.0% |
| !!! | GGTCTAATGGATGTTATTTT+GGG | - | chr2_3:6413527-6413546 | Msa0274580:intron | 30.0% |
| ! | AAACCATAAATACGTCGATT+TGG | + | chr2_3:6413576-6413595 | None:intergenic | 30.0% |
| TAAAGAATTGTTGTGTCACA+AGG | + | chr2_3:6413797-6413816 | None:intergenic | 30.0% | |
| ATTCTTTATCCAAATAGGGA+TGG | - | chr2_3:6413809-6413828 | Msa0274580:CDS | 30.0% | |
| TCATTGGAAGAAGAAGTAAA+TGG | - | chr2_3:6413896-6413915 | Msa0274580:five_prime_UTR | 30.0% | |
| TGTTAAAAATGTAGTGCTTG+AGG | - | chr2_3:6414059-6414078 | Msa0274580:intron | 30.0% | |
| CATTTGTTCTTATACAGCAT+TGG | - | chr2_3:6414203-6414222 | Msa0274580:intron | 30.0% | |
| GTTTATCTTTCTGTTTGGTA+TGG | - | chr2_3:6414272-6414291 | Msa0274580:intron | 30.0% | |
| ! | TTATGCTGAACATAGTTCTA+TGG | - | chr2_3:6414477-6414496 | Msa0274580:five_prime_UTR | 30.0% |
| GTAATACGTGAAACATTGGT+TGG | + | chr2_3:6411023-6411042 | None:intergenic | 35.0% | |
| GAGTGTAATACGTGAAACAT+TGG | + | chr2_3:6411027-6411046 | None:intergenic | 35.0% | |
| TTGGATCCAAAATATCACTC+AGG | + | chr2_3:6411466-6411485 | None:intergenic | 35.0% | |
| AGATTGTACCTAAAACGGTT+CGG | + | chr2_3:6411650-6411669 | None:intergenic | 35.0% | |
| GGATCAGATTGTACCTAAAA+CGG | + | chr2_3:6411655-6411674 | None:intergenic | 35.0% | |
| GTCCTTATTGTTATAGTGAC+GGG | - | chr2_3:6411825-6411844 | Msa0274580:intron | 35.0% | |
| ACGGCAATGCAGTTTATAAA+AGG | + | chr2_3:6411875-6411894 | None:intergenic | 35.0% | |
| ! | TTTTATAAACTGCATTGCCG+TGG | - | chr2_3:6411874-6411893 | Msa0274580:intron | 35.0% |
| AGTTGGAAACGTTCTATGAA+TGG | - | chr2_3:6411953-6411972 | Msa0274580:intron | 35.0% | |
| ! | GTTCTATGAATGGTGGAAAT+GGG | - | chr2_3:6411963-6411982 | Msa0274580:intron | 35.0% |
| AGGTGAATGTACTTAATAGG+AGG | + | chr2_3:6412010-6412029 | None:intergenic | 35.0% | |
| TGCAGGTGAATGTACTTAAT+AGG | + | chr2_3:6412013-6412032 | None:intergenic | 35.0% | |
| !! | ATTCTAGGATGATCATGAAG+CGG | + | chr2_3:6412242-6412261 | None:intergenic | 35.0% |
| !! | GTTTTAAGCAAGGTTCTCTA+TGG | - | chr2_3:6412266-6412285 | Msa0274580:intron | 35.0% |
| TATCAACAATTGCAGAGTAG+TGG | + | chr2_3:6412422-6412441 | None:intergenic | 35.0% | |
| CTCTGCAATTGTTGATATTG+TGG | - | chr2_3:6412425-6412444 | Msa0274580:intron | 35.0% | |
| GTTGATATTGTGGACAAATG+GGG | - | chr2_3:6412435-6412454 | Msa0274580:intron | 35.0% | |
| AAATTGCAGCCATAATGTCT+AGG | + | chr2_3:6412490-6412509 | None:intergenic | 35.0% | |
| ! | AGACATTATGGCTGCAATTT+TGG | - | chr2_3:6412490-6412509 | Msa0274580:intron | 35.0% |
| AGGACAGTAGCTGTATAATT+TGG | - | chr2_3:6412595-6412614 | Msa0274580:intron | 35.0% | |
| ! | ATTGCACTTGAGCAACTTTT+AGG | - | chr2_3:6412776-6412795 | Msa0274580:intron | 35.0% |
| !! | CTTTTAGGTGGAGTAAGATT+TGG | - | chr2_3:6412791-6412810 | Msa0274580:intron | 35.0% |
| TTGAAGAGGTCTATAAAGAC+AGG | + | chr2_3:6412860-6412879 | None:intergenic | 35.0% | |
| TGTCTTTATAGACCTCTTCA+AGG | - | chr2_3:6412859-6412878 | Msa0274580:intron | 35.0% | |
| GTCTTTATAGACCTCTTCAA+GGG | - | chr2_3:6412860-6412879 | Msa0274580:intron | 35.0% | |
| TCTTTATAGACCTCTTCAAG+GGG | - | chr2_3:6412861-6412880 | Msa0274580:intron | 35.0% | |
| GTGGAGACATGTTAAACTAT+TGG | + | chr2_3:6412944-6412963 | None:intergenic | 35.0% | |
| GTCTCCACTAGATAAATTGT+TGG | - | chr2_3:6412956-6412975 | Msa0274580:intron | 35.0% | |
| AATCAATTGCCTTTGTCACT+TGG | - | chr2_3:6412989-6413008 | Msa0274580:intron | 35.0% | |
| AGATAGTTACCAAGTGACAA+AGG | + | chr2_3:6413001-6413020 | None:intergenic | 35.0% | |
| ATGACAAGATTGAAAGTGAG+AGG | + | chr2_3:6413042-6413061 | None:intergenic | 35.0% | |
| CTCACTTTCAATCTTGTCAT+TGG | - | chr2_3:6413042-6413061 | Msa0274580:intron | 35.0% | |
| !! | TGAGTGGATTGTCTAAATGT+CGG | - | chr2_3:6413139-6413158 | Msa0274580:CDS | 35.0% |
| AGATCGGACAATCCAAAATT+TGG | - | chr2_3:6413380-6413399 | Msa0274580:CDS | 35.0% | |
| ! | TCACTCAGTCAACCAAATTT+TGG | + | chr2_3:6413395-6413414 | None:intergenic | 35.0% |
| TTACTGGAAGCAAATATCTG+AGG | + | chr2_3:6413506-6413525 | None:intergenic | 35.0% | |
| CAGATATTTGCTTCCAGTAA+TGG | - | chr2_3:6413506-6413525 | Msa0274580:intron | 35.0% | |
| AACATCCATTAGACCATTAC+TGG | + | chr2_3:6413522-6413541 | None:intergenic | 35.0% | |
| ATGCCAAATCGACGTATTTA+TGG | - | chr2_3:6413570-6413589 | Msa0274580:intron | 35.0% | |
| ! | CAATCTTTGACAAGTTTTGC+TGG | + | chr2_3:6413761-6413780 | None:intergenic | 35.0% |
| ACTTCTTCTTCCAATGAGTA+AGG | + | chr2_3:6413893-6413912 | None:intergenic | 35.0% | |
| TTCCCAATAATCAAATCGCT+AGG | + | chr2_3:6414138-6414157 | None:intergenic | 35.0% | |
| AGCGATTTGATTATTGGGAA+TGG | - | chr2_3:6414138-6414157 | Msa0274580:intron | 35.0% | |
| GCGATTTGATTATTGGGAAT+GGG | - | chr2_3:6414139-6414158 | Msa0274580:intron | 35.0% | |
| AATACAGAGGCCCTAATATT+CGG | - | chr2_3:6414163-6414182 | Msa0274580:intron | 35.0% | |
| ! | TTTACCTGGTTGGAACATTT+TGG | - | chr2_3:6414244-6414263 | Msa0274580:intron | 35.0% |
| ATTTCCAAAATGTTCCAACC+AGG | + | chr2_3:6414251-6414270 | None:intergenic | 35.0% | |
| GTACAGACTATGATAAATGC+TGG | - | chr2_3:6414308-6414327 | Msa0274580:intron | 35.0% | |
| GAAAGGGAAAACTAGAAACA+TGG | + | chr2_3:6414352-6414371 | None:intergenic | 35.0% | |
| CCGCAGTTATAATCTAGAAA+GGG | + | chr2_3:6414368-6414387 | None:intergenic | 35.0% | |
| CCCTTTCTAGATTATAACTG+CGG | - | chr2_3:6414365-6414384 | Msa0274580:intron | 35.0% | |
| ! | TAGCGACCTGAGTGATATTT+TGG | - | chr2_3:6411457-6411476 | Msa0274580:CDS | 40.0% |
| GAAATTGTATGACGTCTGCA+AGG | - | chr2_3:6411575-6411594 | Msa0274580:CDS | 40.0% | |
| ! | GAAAAAGTCCGAACCGTTTT+AGG | - | chr2_3:6411639-6411658 | Msa0274580:intron | 40.0% |
| CACCCGTCACTATAACAATA+AGG | + | chr2_3:6411830-6411849 | None:intergenic | 40.0% | |
| TGGAAACGTTCTATGAATGG+TGG | - | chr2_3:6411956-6411975 | Msa0274580:intron | 40.0% | |
| ! | CGTTCTATGAATGGTGGAAA+TGG | - | chr2_3:6411962-6411981 | Msa0274580:intron | 40.0% |
| ! | AATGGTGGAAATGGGAGAAT+TGG | - | chr2_3:6411971-6411990 | Msa0274580:intron | 40.0% |
| !! | ACAATAAGGAGTGTCACCTT+GGG | + | chr2_3:6412348-6412367 | None:intergenic | 40.0% |
| !! | TACAATAAGGAGTGTCACCT+TGG | + | chr2_3:6412349-6412368 | None:intergenic | 40.0% |
| CAATTATGATCACACATGCG+AGG | + | chr2_3:6412529-6412548 | None:intergenic | 40.0% | |
| CTCGCATGTGTGATCATAAT+TGG | - | chr2_3:6412527-6412546 | Msa0274580:intron | 40.0% | |
| CTGTAAACGGTCATCTAGAT+AGG | + | chr2_3:6412696-6412715 | None:intergenic | 40.0% | |
| AATACAGAGCAGAAAACCAG+CGG | + | chr2_3:6413073-6413092 | None:intergenic | 40.0% | |
| TTCCTACCTATACCTGTTGA+GGG | - | chr2_3:6413293-6413312 | Msa0274580:intron | 40.0% | |
| TGCTTCCAGTAATGGTCTAA+TGG | - | chr2_3:6413514-6413533 | Msa0274580:intron | 40.0% | |
| !! | TTATGGCTTTGAAGCAATGG+AGG | + | chr2_3:6413838-6413857 | None:intergenic | 40.0% |
| TTCTTCCAATGAGTAAGGAG+GGG | + | chr2_3:6413888-6413907 | None:intergenic | 40.0% | |
| CTTCTTCCAATGAGTAAGGA+GGG | + | chr2_3:6413889-6413908 | None:intergenic | 40.0% | |
| TCTTCTTCCAATGAGTAAGG+AGG | + | chr2_3:6413890-6413909 | None:intergenic | 40.0% | |
| ! | TGAGTTCATCTGAAATCACC+TGG | - | chr2_3:6414094-6414113 | Msa0274580:intron | 40.0% |
| CCAATAATCAAATCGCTAGG+CGG | + | chr2_3:6414135-6414154 | None:intergenic | 40.0% | |
| CGCCTAGCGATTTGATTATT+GGG | - | chr2_3:6414133-6414152 | Msa0274580:intron | 40.0% | |
| TCCTTCATCGCCGAATATTA+GGG | + | chr2_3:6414176-6414195 | None:intergenic | 40.0% | |
| !! | GTTCTTATACAGCATTGGTC+AGG | - | chr2_3:6414208-6414227 | Msa0274580:intron | 40.0% |
| GCTTGACAAGAAACTTTACC+TGG | - | chr2_3:6414230-6414249 | Msa0274580:intron | 40.0% | |
| GACAAGAAACTTTACCTGGT+TGG | - | chr2_3:6414234-6414253 | Msa0274580:intron | 40.0% | |
| GCCGCAGTTATAATCTAGAA+AGG | + | chr2_3:6414369-6414388 | None:intergenic | 40.0% | |
| TCTAGATTATAACTGCGGCA+TGG | - | chr2_3:6414370-6414389 | Msa0274580:five_prime_UTR | 40.0% | |
| TTGTTGTCTGTCTCTCACTC+TGG | - | chr2_3:6410927-6410946 | Msa0274580:intron | 45.0% | |
| AGAGAGTCACGACATAATCG+AGG | + | chr2_3:6410994-6411013 | None:intergenic | 45.0% | |
| !! | TTCTGAAATAGGTCCCTCAG+TGG | + | chr2_3:6411610-6411629 | None:intergenic | 45.0% |
| TGAGGGACCTATTTCAGAAG+AGG | - | chr2_3:6411611-6411630 | Msa0274580:CDS | 45.0% | |
| !! | TCGAGAGCCTCTTCTGAAAT+AGG | + | chr2_3:6411621-6411640 | None:intergenic | 45.0% |
| CTCATGGTCAAGACCGATAT+GGG | + | chr2_3:6411918-6411937 | None:intergenic | 45.0% | |
| TACTTAATAGGAGGACCCTC+AGG | + | chr2_3:6412001-6412020 | None:intergenic | 45.0% | |
| AGAACTTGTCACATTCGTGC+AGG | + | chr2_3:6412030-6412049 | None:intergenic | 45.0% | |
| ! | GGAGTATTCTGTATGTCTCC+TGG | - | chr2_3:6412206-6412225 | Msa0274580:intron | 45.0% |
| TGAAGCGGAATCAAAGAACC+AGG | + | chr2_3:6412227-6412246 | None:intergenic | 45.0% | |
| ! | GCACTTGAGCAACTTTTAGG+TGG | - | chr2_3:6412779-6412798 | Msa0274580:intron | 45.0% |
| TCAAGGATTACCCCTTGAAG+AGG | + | chr2_3:6412874-6412893 | None:intergenic | 45.0% | |
| GTTCCTACCTATACCTGTTG+AGG | - | chr2_3:6413292-6413311 | Msa0274580:intron | 45.0% | |
| TCCTACCTATACCTGTTGAG+GGG | - | chr2_3:6413294-6413313 | Msa0274580:intron | 45.0% | |
| ATTGTCCGATCTTGATCCAC+CGG | + | chr2_3:6413372-6413391 | None:intergenic | 45.0% | |
| TTGCACACAATCCAAATCCG+TGG | - | chr2_3:6413415-6413434 | Msa0274580:CDS | 45.0% | |
| TGAAGACCCCTTAGAGTAGT+GGG | - | chr2_3:6413438-6413457 | Msa0274580:CDS | 45.0% | |
| !! | GGGTTATGGCTTTGAAGCAA+TGG | + | chr2_3:6413841-6413860 | None:intergenic | 45.0% |
| ! | AATGTCGAAGAGAGCACAAG+GGG | + | chr2_3:6413861-6413880 | None:intergenic | 45.0% |
| ! | GAATGTCGAAGAGAGCACAA+GGG | + | chr2_3:6413862-6413881 | None:intergenic | 45.0% |
| ! | AGAATGTCGAAGAGAGCACA+AGG | + | chr2_3:6413863-6413882 | None:intergenic | 45.0% |
| TCTTACCCCTCCTTACTCAT+TGG | - | chr2_3:6413880-6413899 | Msa0274580:five_prime_UTR | 45.0% | |
| !! | AGAAGGAAGAGAGAAGTACC+TGG | + | chr2_3:6413965-6413984 | None:intergenic | 45.0% |
| ATAATCAAATCGCTAGGCGG+CGG | + | chr2_3:6414132-6414151 | None:intergenic | 45.0% | |
| CCGCCTAGCGATTTGATTAT+TGG | - | chr2_3:6414132-6414151 | Msa0274580:intron | 45.0% | |
| ATTGGGAATGGGCAATACAG+AGG | - | chr2_3:6414150-6414169 | Msa0274580:intron | 45.0% | |
| CTCCTTCATCGCCGAATATT+AGG | + | chr2_3:6414177-6414196 | None:intergenic | 45.0% | |
| GAGAGACACGAGAAGAGAAC+AGG | + | chr2_3:6410959-6410978 | None:intergenic | 50.0% | |
| AAGGCTTCCTTGTCCACTGA+GGG | - | chr2_3:6411594-6411613 | Msa0274580:CDS | 50.0% | |
| AATAGGTCCCTCAGTGGACA+AGG | + | chr2_3:6411604-6411623 | None:intergenic | 50.0% | |
| GGGTTGAAGCCTTCCCATAT+CGG | - | chr2_3:6411902-6411921 | Msa0274580:intron | 50.0% | |
| TGGTCAAGACCGATATGGGA+AGG | + | chr2_3:6411914-6411933 | None:intergenic | 50.0% | |
| CCTCATGGTCAAGACCGATA+TGG | + | chr2_3:6411919-6411938 | None:intergenic | 50.0% | |
| CCATATCGGTCTTGACCATG+AGG | - | chr2_3:6411916-6411935 | Msa0274580:intron | 50.0% | |
| TGGGAGAATTGGAACTCCTG+AGG | - | chr2_3:6411982-6412001 | Msa0274580:intron | 50.0% | |
| GGGAGAATTGGAACTCCTGA+GGG | - | chr2_3:6411983-6412002 | Msa0274580:intron | 50.0% | |
| !! | GTGGACAAATGGGGTTGATG+CGG | - | chr2_3:6412444-6412463 | Msa0274580:intron | 50.0% |
| ! | GGTTGATGCGGCCGTAATAA+CGG | - | chr2_3:6412456-6412475 | Msa0274580:intron | 50.0% |
| ACCCCTCAACAGGTATAGGT+AGG | + | chr2_3:6413298-6413317 | None:intergenic | 50.0% | |
| ACCTATACCTGTTGAGGGGT+TGG | - | chr2_3:6413298-6413317 | Msa0274580:intron | 50.0% | |
| ACCAACCCCTCAACAGGTAT+AGG | + | chr2_3:6413302-6413321 | None:intergenic | 50.0% | |
| !! | AGGGGTTGGTGAAGGGATTA+GGG | - | chr2_3:6413312-6413331 | Msa0274580:intron | 50.0% |
| AGTCACGCAGTTAGCCACAT+CGG | - | chr2_3:6413343-6413362 | Msa0274580:intron | 50.0% | |
| ! | ACTCTAAGGGGTCTTCACCA+CGG | + | chr2_3:6413435-6413454 | None:intergenic | 50.0% |
| GTGAAGACCCCTTAGAGTAG+TGG | - | chr2_3:6413437-6413456 | Msa0274580:CDS | 50.0% | |
| ACCTGTCCCACTACTCTAAG+GGG | + | chr2_3:6413447-6413466 | None:intergenic | 50.0% | |
| CACCTGTCCCACTACTCTAA+GGG | + | chr2_3:6413448-6413467 | None:intergenic | 50.0% | |
| TGGAGGTTGCCATCCCTATT+TGG | + | chr2_3:6413821-6413840 | None:intergenic | 50.0% | |
| ! | GAAGAGAGCACAAGGGGTTA+TGG | + | chr2_3:6413855-6413874 | None:intergenic | 50.0% |
| CTTATTTCCGCAAGTCGCTG+AGG | - | chr2_3:6413930-6413949 | Msa0274580:five_prime_UTR | 50.0% | |
| ! | CGGCGGAATCTTTTCTAACC+AGG | + | chr2_3:6414115-6414134 | None:intergenic | 50.0% |
| GCCCTAATATTCGGCGATGA+AGG | - | chr2_3:6414172-6414191 | Msa0274580:intron | 50.0% | |
| CAAGGCTTCCTTGTCCACTG+AGG | - | chr2_3:6411593-6411612 | Msa0274580:CDS | 55.0% | |
| AACTGCATTGCCGTGGCAGA+TGG | - | chr2_3:6411881-6411900 | Msa0274580:intron | 55.0% | |
| ACTGCATTGCCGTGGCAGAT+GGG | - | chr2_3:6411882-6411901 | Msa0274580:intron | 55.0% | |
| AGGCTTCAACCCATCTGCCA+CGG | + | chr2_3:6411894-6411913 | None:intergenic | 55.0% | |
| TCTTGACCATGAGGCGCAAC+TGG | - | chr2_3:6411925-6411944 | Msa0274580:intron | 55.0% | |
| TGGGATAGATCGCATGACGC+AGG | + | chr2_3:6412329-6412348 | None:intergenic | 55.0% | |
| GCGTCATGCGATCTATCCCA+AGG | - | chr2_3:6412329-6412348 | Msa0274580:intron | 55.0% | |
| CTTGTCATTGGTACTGCCGC+TGG | - | chr2_3:6413054-6413073 | Msa0274580:CDS | 55.0% | |
| !! | ACCTGTTGAGGGGTTGGTGA+AGG | - | chr2_3:6413304-6413323 | Msa0274580:intron | 55.0% |
| !! | CCTGTTGAGGGGTTGGTGAA+GGG | - | chr2_3:6413305-6413324 | Msa0274580:intron | 55.0% |
| !! | GAGGGGTTGGTGAAGGGATT+AGG | - | chr2_3:6413311-6413330 | Msa0274580:intron | 55.0% |
| AGGGGTCTTCACCACGGATT+TGG | + | chr2_3:6413429-6413448 | None:intergenic | 55.0% | |
| ! | ACCCCTTAGAGTAGTGGGAC+AGG | - | chr2_3:6413443-6413462 | Msa0274580:CDS | 55.0% |
| GCACCTGTCCCACTACTCTA+AGG | + | chr2_3:6413449-6413468 | None:intergenic | 55.0% | |
| ! | AGAGTAGTGGGACAGGTGCA+TGG | - | chr2_3:6413450-6413469 | Msa0274580:CDS | 55.0% |
| GATCTGTCCTCAGCGACTTG+CGG | + | chr2_3:6413940-6413959 | None:intergenic | 55.0% | |
| TCGCTGAGGACAGATCTTCC+AGG | - | chr2_3:6413944-6413963 | Msa0274580:five_prime_UTR | 55.0% | |
| GTAGTGCTTGAGGAGCTGCA+CGG | - | chr2_3:6414069-6414088 | Msa0274580:intron | 55.0% | |
| TAGTGCTTGAGGAGCTGCAC+GGG | - | chr2_3:6414070-6414089 | Msa0274580:intron | 55.0% | |
| CCCTTCACCAACCCCTCAAC+AGG | + | chr2_3:6413308-6413327 | None:intergenic | 60.0% | |
| CAGTTAGCCACATCGGCGTC+CGG | - | chr2_3:6413350-6413369 | Msa0274580:intron | 60.0% | |
| GGCGTCCGGTGGATCAAGAT+CGG | - | chr2_3:6413364-6413383 | Msa0274580:CDS | 60.0% | |
| TGGGACAGGTGCATGGCAGT+AGG | - | chr2_3:6413457-6413476 | Msa0274580:CDS | 60.0% | |
| TTCGCGCCAGTTGCGCCTCA+TGG | + | chr2_3:6411934-6411953 | None:intergenic | 65.0% | |
| AGGCGCAACTGGCGCGAAGT+TGG | - | chr2_3:6411936-6411955 | Msa0274580:intron | 65.0% | |
| TTAGCCACATCGGCGTCCGG+TGG | - | chr2_3:6413353-6413372 | Msa0274580:CDS | 65.0% | |
| TGATCCACCGGACGCCGATG+TGG | + | chr2_3:6413360-6413379 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 6410891 | 6414511 | 6410891 | ID=Msa0274580;Name=Msa0274580 |
| chr2_3 | mRNA | 6410891 | 6414511 | 6410891 | ID=Msa0274580-mRNA-1;Parent=Msa0274580;Name=Msa0274580-mRNA-1;_AED=0.05;_eAED=0.05;_QI=343|1|1|1|0.66|0.42|7|300|245 |
| chr2_3 | exon | 6410891 | 6410937 | 6410891 | ID=Msa0274580-mRNA-1:exon:3036;Parent=Msa0274580-mRNA-1 |
| chr2_3 | exon | 6410958 | 6411329 | 6410958 | ID=Msa0274580-mRNA-1:exon:3035;Parent=Msa0274580-mRNA-1 |
| chr2_3 | exon | 6411437 | 6411655 | 6411437 | ID=Msa0274580-mRNA-1:exon:3034;Parent=Msa0274580-mRNA-1 |
| chr2_3 | exon | 6413052 | 6413199 | 6413052 | ID=Msa0274580-mRNA-1:exon:3033;Parent=Msa0274580-mRNA-1 |
| chr2_3 | exon | 6413351 | 6413502 | 6413351 | ID=Msa0274580-mRNA-1:exon:3032;Parent=Msa0274580-mRNA-1 |
| chr2_3 | exon | 6413742 | 6414039 | 6413742 | ID=Msa0274580-mRNA-1:exon:3031;Parent=Msa0274580-mRNA-1 |
| chr2_3 | exon | 6414367 | 6414511 | 6414367 | ID=Msa0274580-mRNA-1:exon:3030;Parent=Msa0274580-mRNA-1 |
| chr2_3 | five_prime_UTR | 6414367 | 6414511 | 6414367 | ID=Msa0274580-mRNA-1:five_prime_utr;Parent=Msa0274580-mRNA-1 |
| chr2_3 | five_prime_UTR | 6413842 | 6414039 | 6413842 | ID=Msa0274580-mRNA-1:five_prime_utr;Parent=Msa0274580-mRNA-1 |
| chr2_3 | CDS | 6413742 | 6413841 | 6413742 | ID=Msa0274580-mRNA-1:cds;Parent=Msa0274580-mRNA-1 |
| chr2_3 | CDS | 6413351 | 6413502 | 6413351 | ID=Msa0274580-mRNA-1:cds;Parent=Msa0274580-mRNA-1 |
| chr2_3 | CDS | 6413052 | 6413199 | 6413052 | ID=Msa0274580-mRNA-1:cds;Parent=Msa0274580-mRNA-1 |
| chr2_3 | CDS | 6411437 | 6411655 | 6411437 | ID=Msa0274580-mRNA-1:cds;Parent=Msa0274580-mRNA-1 |
| chr2_3 | CDS | 6411211 | 6411329 | 6411211 | ID=Msa0274580-mRNA-1:cds;Parent=Msa0274580-mRNA-1 |
| chr2_3 | three_prime_UTR | 6410958 | 6411210 | 6410958 | ID=Msa0274580-mRNA-1:three_prime_utr;Parent=Msa0274580-mRNA-1 |
| chr2_3 | three_prime_UTR | 6410891 | 6410937 | 6410891 | ID=Msa0274580-mRNA-1:three_prime_utr;Parent=Msa0274580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
