AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0276350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0276350 MtrunA17_Chr3g0141461 83.521 267 16 1 1 239 342 608 2.92e-119 356
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0276350 AT1G75150.2 38.618 246 97 6 1 200 367 604 6.21e-21 92.0
Msa0276350 AT1G75150.3 38.618 246 97 6 1 200 367 604 6.40e-21 92.0
Msa0276350 AT1G75150.1 38.618 246 97 6 1 200 367 604 6.45e-21 92.0

Find 228 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAACCGCAATTAAGTTTC+TGG 0.119108 2_3:+8615169 None:intergenic
ATTCCGATTTAAGTCCTTTA+AGG 0.140672 2_3:-8618031 Msa0276350:intron
GTCCGATCATCATATATATT+TGG 0.169505 2_3:-8614188 Msa0276350:three_prime_UTR
GGGTTTGCTCAACTTTATTT+TGG 0.176166 2_3:-8617081 Msa0276350:five_prime_UTR
TGTTTAGAGTTGGTGGTTTC+TGG 0.183311 2_3:-8618927 Msa0276350:five_prime_UTR
CTGTGTATTTCTTTGGAATT+TGG 0.196893 2_3:+8613735 None:intergenic
TGTCTCAGTTTGCATATAAT+TGG 0.205546 2_3:+8613408 None:intergenic
TTTCTCAATCAATTGAATTA+TGG 0.220514 2_3:-8613263 Msa0276350:three_prime_UTR
ATAGTAAAGTCGACGTTATT+TGG 0.223314 2_3:-8617857 Msa0276350:five_prime_UTR
ATTTGTTCTGTGTATTTCTT+TGG 0.223685 2_3:+8613728 None:intergenic
AATTGAAATCCATTGGTTAT+AGG 0.240760 2_3:-8616443 Msa0276350:five_prime_UTR
ATTTGGTCGATGCAACATTA+TGG 0.242218 2_3:-8617700 Msa0276350:five_prime_UTR
TCCATCTTGGATCTCCTTAA+AGG 0.242923 2_3:+8618017 None:intergenic
GAACCTCAGTCATCAGTTCT+AGG 0.254865 2_3:-8616361 Msa0276350:five_prime_UTR
CGGTTGTATCTCAGATTATA+AGG 0.256841 2_3:-8613786 Msa0276350:intron
ACCTCTTAGACGTTTCTTAC+AGG 0.271687 2_3:-8618817 Msa0276350:intron
TGGCATCATTCTCATGCTTC+TGG 0.272694 2_3:-8618852 Msa0276350:five_prime_UTR
TAACAAATTTGCTGGGATAA+AGG 0.281126 2_3:+8614420 None:intergenic
ATCCGGTGGTTGAGAGGTTT+AGG 0.288162 2_3:-8617428 Msa0276350:five_prime_UTR
CTTGATTCTGCTCCTGTTGA+TGG 0.294514 2_3:-8615866 Msa0276350:CDS
GTTCCTGATACCAAGATAAA+AGG 0.297250 2_3:-8614671 Msa0276350:CDS
CATCACCTTCTTCATTATCT+TGG 0.303254 2_3:+8615324 None:intergenic
CATTATCTTGGAAGCGTTGT+AGG 0.308701 2_3:+8615336 None:intergenic
TTGATGATTTAGTTATGTTT+TGG 0.309038 2_3:+8614496 None:intergenic
GTTTCCGTTAATGATTGTTT+TGG 0.312248 2_3:-8613308 Msa0276350:three_prime_UTR
ATTCTTTCTTGCTAGAAAAT+CGG 0.324655 2_3:-8616691 Msa0276350:five_prime_UTR
TCGATTATGCAGTGGAAATT+TGG 0.333443 2_3:-8617717 Msa0276350:intron
AAGTTCATTGAAAGCATAGA+TGG 0.344830 2_3:+8615893 None:intergenic
TGCAATGGGACAAGTGTAAA+TGG 0.348423 2_3:-8619046 Msa0276350:five_prime_UTR
GATGAAGTTTCTTGCTGAAA+AGG 0.356076 2_3:-8617657 Msa0276350:five_prime_UTR
GATGATCCCGCAGATGTTTA+CGG 0.359304 2_3:-8615010 Msa0276350:CDS
TCCGATCATCATATATATTT+GGG 0.359571 2_3:-8614187 Msa0276350:three_prime_UTR
TGCTGTGATTGAGAAAATTA+AGG 0.360634 2_3:-8616323 Msa0276350:five_prime_UTR
TGTGATCGAACCGACTTGTT+TGG 0.366425 2_3:-8616531 Msa0276350:five_prime_UTR
GGTTTCAAATGCAACAAACT+TGG 0.375630 2_3:-8617104 Msa0276350:five_prime_UTR
GTCACTGTCATCTTCCTCTT+CGG 0.375822 2_3:+8615364 None:intergenic
TTTGGTCGATGCAACATTAT+GGG 0.378967 2_3:-8617699 Msa0276350:five_prime_UTR
TTGACAGGGTCACCGCTTGC+AGG 0.380630 2_3:+8615407 None:intergenic
TCCGGTGGTTGAGAGGTTTA+GGG 0.382872 2_3:-8617427 Msa0276350:five_prime_UTR
GTTGGGATACCTATAGGATA+TGG 0.388445 2_3:-8618287 Msa0276350:five_prime_UTR
AATTTGTTAAATAAAATTGT+AGG 0.391318 2_3:-8614406 Msa0276350:three_prime_UTR
CACCTAATCTTTGCAACAAC+TGG 0.391466 2_3:-8617482 Msa0276350:five_prime_UTR
AAGAAAAGGGAGAGAGAAAC+GGG 0.392118 2_3:-8619590 Msa0276350:five_prime_UTR
AAAGAAAAGGGAGAGAGAAA+CGG 0.396100 2_3:-8619591 Msa0276350:five_prime_UTR
TTCTTTCTTGCTAGAAAATC+GGG 0.399754 2_3:-8616690 Msa0276350:five_prime_UTR
AATTCCAAAACAATCATTAA+CGG 0.403566 2_3:+8613304 None:intergenic
TCTATAAGAGAGGGACTGTT+TGG 0.404011 2_3:+8614936 None:intergenic
CTTGAGCAGCAGGATACAAC+TGG 0.406510 2_3:-8615207 Msa0276350:CDS
TAGGAGAAAGGGAAAGCGAT+GGG 0.409351 2_3:-8619450 Msa0276350:five_prime_UTR
CATGCCCAGTGCAAGATTGC+AGG 0.415754 2_3:-8617601 Msa0276350:intron
TTTGTCTTTGAGCACAAGAT+TGG 0.421142 2_3:+8617814 None:intergenic
GTTTATCAATTTGAAACATC+CGG 0.422520 2_3:-8617445 Msa0276350:five_prime_UTR
AAGTCGACGTTATTTGGATC+TGG 0.425700 2_3:-8617851 Msa0276350:five_prime_UTR
CCACTTTGAAATCTCCATCT+TGG 0.426248 2_3:+8618004 None:intergenic
AAGATAAAGAAAGGAACAAA+GGG 0.428594 2_3:-8618233 Msa0276350:five_prime_UTR
ATTTGTTAAATAAAATTGTA+GGG 0.434717 2_3:-8614405 Msa0276350:three_prime_UTR
TCAGCAATGGCTTGAGCAGC+AGG 0.435184 2_3:-8615217 Msa0276350:CDS
GTTTCAAATGCAACAAACTT+GGG 0.437289 2_3:-8617103 Msa0276350:five_prime_UTR
TAATTAGTATAGTACTATAT+AGG 0.439319 2_3:-8618644 Msa0276350:five_prime_UTR
TTGCTGAAAAGGAAGGAAAC+AGG 0.440746 2_3:-8617646 Msa0276350:five_prime_UTR
AGATGGGGCAAACACTTATT+CGG 0.441854 2_3:+8615910 None:intergenic
AACGGGAACGGGAGAAGAAA+GGG 0.446044 2_3:-8619573 Msa0276350:five_prime_UTR
CTTATTCAACTTCCCATTGA+GGG 0.450679 2_3:+8615937 None:intergenic
AATCTTTGCAACAACTGGTC+CGG 0.453619 2_3:-8617477 Msa0276350:five_prime_UTR
GAATTTGGCAGAAACAACTT+TGG 0.454646 2_3:+8613750 None:intergenic
ATAACTAAATCATCAAAGAT+AGG 0.460894 2_3:-8614489 Msa0276350:CDS
ACAACGCTTTGTAAGATTTG+AGG 0.461225 2_3:+8613642 None:intergenic
AAAGGAGATCCATATCCTAT+AGG 0.461389 2_3:+8618278 None:intergenic
GAGCCAGAGGTGATCTTAAG+AGG 0.462766 2_3:-8616277 Msa0276350:five_prime_UTR
AAACGGGAACGGGAGAAGAA+AGG 0.462790 2_3:-8619574 Msa0276350:five_prime_UTR
TAACAGAACGACGAAATTGA+TGG 0.463467 2_3:-8619410 Msa0276350:five_prime_UTR
TCATCGACAAAAGCCTTGAC+AGG 0.469980 2_3:+8615392 None:intergenic
ATTATTCAATTGAAATCCAT+TGG 0.470369 2_3:-8616450 Msa0276350:five_prime_UTR
GGAGAAAGGGAAAGCGATGG+GGG 0.471413 2_3:-8619448 Msa0276350:five_prime_UTR
GCAGCAGTTGGGATACCTAT+AGG 0.472722 2_3:-8618293 Msa0276350:five_prime_UTR
GGATAAAGGAGCACTTCATC+AGG 0.473283 2_3:+8614434 None:intergenic
AATTTGGCAGAAACAACTTT+GGG 0.476283 2_3:+8613751 None:intergenic
AAGAAACGTCTAAGAGGTCT+AGG 0.477131 2_3:+8618822 None:intergenic
TGAGTTAATATCAACACAAC+AGG 0.477976 2_3:+8617622 None:intergenic
ACTTACACATCACCATCAAC+AGG 0.478005 2_3:+8615854 None:intergenic
AATGTGTGGCATATCAAATA+TGG 0.478119 2_3:+8614521 None:intergenic
GCTGCTCAAGCCATTGCTGA+TGG 0.482598 2_3:+8615220 None:intergenic
AATACCTGGGTATCATCAAC+AGG 0.482930 2_3:+8616082 None:intergenic
TGGTTGAGAGGTTTAGGGCT+AGG 0.484130 2_3:-8617422 Msa0276350:intron
AGGGAGAGAGAAACGGGAAC+GGG 0.484162 2_3:-8619584 Msa0276350:five_prime_UTR
GTTATGGTGTTTAGAGTTGG+TGG 0.485139 2_3:-8618934 Msa0276350:five_prime_UTR
ATCTTTGCAACAACTGGTCC+GGG 0.487492 2_3:-8617476 Msa0276350:five_prime_UTR
ATTAAAGAAGAGGCCCTCAA+TGG 0.488027 2_3:-8615950 Msa0276350:five_prime_UTR
ATTCACCTGCAATCTTGCAC+TGG 0.488140 2_3:+8617596 None:intergenic
CGACTGAAGATGAAAGCAGC+AGG 0.488797 2_3:-8614727 Msa0276350:CDS
TAGAATTTGATGGCAGCAGT+TGG 0.491226 2_3:-8618305 Msa0276350:five_prime_UTR
AACACAGTGCCACACTTACA+TGG 0.491229 2_3:-8615449 Msa0276350:CDS
TGAGTTATGGTGTTTAGAGT+TGG 0.493376 2_3:-8618937 Msa0276350:five_prime_UTR
TGTGAAATGATGGTATTAAT+CGG 0.496057 2_3:-8613522 Msa0276350:three_prime_UTR
GACGAAATTGATGGGGAGAA+AGG 0.496180 2_3:-8619401 Msa0276350:five_prime_UTR
AAGATTAGTGCAGGAAGTGA+TGG 0.496426 2_3:-8618900 Msa0276350:five_prime_UTR
AAACGGGAAAGGGAGGAAAA+CGG 0.496880 2_3:-8619536 Msa0276350:five_prime_UTR
ACGGGAGAAGAAAGGGAAAA+CGG 0.497208 2_3:-8619566 Msa0276350:five_prime_UTR
GTGAGGAAGAGTAGGAGAAA+GGG 0.498348 2_3:-8619461 Msa0276350:five_prime_UTR
ACGAAGAAGTCAATTAAGAC+AGG 0.499928 2_3:-8613565 Msa0276350:three_prime_UTR
CAAGCCATTGCTGATGGAGT+TGG 0.500045 2_3:+8615226 None:intergenic
CGAACACGGTCAAGAATTGC+TGG 0.500753 2_3:+8618205 None:intergenic
GAGTTCAACTAAATTCTCAA+TGG 0.504073 2_3:+8616251 None:intergenic
GTGGATAGTATGTATGCAAT+GGG 0.505137 2_3:-8619060 Msa0276350:five_prime_UTR
GGTGAGGAAGAGTAGGAGAA+AGG 0.506541 2_3:-8619462 Msa0276350:five_prime_UTR
CTTGTCATTGTCCTCATCAT+CGG 0.507226 2_3:+8615475 None:intergenic
GATGTATCTGTGAGGGTCAA+AGG 0.507460 2_3:+8618260 None:intergenic
ATGCCTTCTTCTCAAAAGCA+TGG 0.508089 2_3:-8614221 Msa0276350:three_prime_UTR
AAGGGAGAGAGAAACGGGAA+CGG 0.508194 2_3:-8619585 Msa0276350:five_prime_UTR
TTAAAGAAGAGGCCCTCAAT+GGG 0.508936 2_3:-8615949 Msa0276350:five_prime_UTR
CTGCTGCTTTCATCTTCAGT+CGG 0.512593 2_3:+8614728 None:intergenic
TAATAAAGCACAATTTCCTC+TGG 0.513963 2_3:+8616469 None:intergenic
GACCAGTTGTTGCAAAGATT+AGG 0.514745 2_3:+8617480 None:intergenic
CTTCCTCTTAAGATCACCTC+TGG 0.514845 2_3:+8616274 None:intergenic
AATTGACATTTCATTGCTTG+TGG 0.514900 2_3:-8617051 Msa0276350:intron
AGGAGAAAGGGAAAGCGATG+GGG 0.516756 2_3:-8619449 Msa0276350:five_prime_UTR
TTGCTTGGAGATAAACTCCT+TGG 0.517887 2_3:-8618872 Msa0276350:five_prime_UTR
CAAGATAAAGAAAGGAACAA+AGG 0.518432 2_3:-8618234 Msa0276350:five_prime_UTR
ATTCTTGACCGTGTTCGCGA+TGG 0.519390 2_3:-8618199 Msa0276350:five_prime_UTR
ACCTGTAAGAAACGTCTAAG+AGG 0.521381 2_3:+8618816 None:intergenic
TCTGGTAACAAGATTAGTGC+AGG 0.522139 2_3:-8618909 Msa0276350:five_prime_UTR
CTCCAGGTCTTCCGATGATG+AGG 0.523194 2_3:-8615486 Msa0276350:intron
CTTTATCCGTAAACATCTGC+GGG 0.523224 2_3:+8615004 None:intergenic
GCTCCATTCCACCAGGATGA+AGG 0.523667 2_3:+8616296 None:intergenic
AGAATTTGATGGCAGCAGTT+GGG 0.524314 2_3:-8618304 Msa0276350:five_prime_UTR
ATCTGACGATGAAGTTGAAG+AGG 0.529423 2_3:-8615136 Msa0276350:CDS
CGCTTCCAAGATAATGAAGA+AGG 0.530519 2_3:-8615329 Msa0276350:intron
GTCAGAGGATTCTTCAGATA+CGG 0.530551 2_3:-8614129 Msa0276350:intron
TAGACTTTACATTTATCCCA+TGG 0.531503 2_3:+8613463 None:intergenic
CATCATTCTCATGCTTCTGG+TGG 0.534522 2_3:-8618849 Msa0276350:five_prime_UTR
ACATCAAGCAAGATAAAGAA+AGG 0.535370 2_3:-8618242 Msa0276350:five_prime_UTR
AGAGTCAAATGTATCACTGA+TGG 0.535371 2_3:-8613680 Msa0276350:three_prime_UTR
TTTGTCTAGGTTCTTGACCA+TGG 0.538415 2_3:-8616717 Msa0276350:intron
AACAGAACGACGAAATTGAT+GGG 0.538983 2_3:-8619409 Msa0276350:five_prime_UTR
GCTTATTCAACTTCCCATTG+AGG 0.539326 2_3:+8615936 None:intergenic
GTAGGAGAAAGGGAAAGCGA+TGG 0.539343 2_3:-8619451 Msa0276350:five_prime_UTR
GGTTGTATCTCAGATTATAA+GGG 0.541946 2_3:-8613785 Msa0276350:intron
TCACCTTCATCCTGGTGGAA+TGG 0.544091 2_3:-8616299 Msa0276350:five_prime_UTR
TCCTTTAAGGAGATCCAAGA+TGG 0.544360 2_3:-8618018 Msa0276350:five_prime_UTR
TAATAACAATAATGAGGAGA+TGG 0.550228 2_3:-8618985 Msa0276350:five_prime_UTR
ACCTCTGGCTCCATTCCACC+AGG 0.550691 2_3:+8616289 None:intergenic
GAAGTGATGGAAAAGTTGCT+TGG 0.551623 2_3:-8618887 Msa0276350:five_prime_UTR
AATAAATGATATTAAAGAAG+AGG 0.553156 2_3:-8615960 Msa0276350:five_prime_UTR
GCCCTAAACCTCTCAACCAC+CGG 0.553362 2_3:+8617426 None:intergenic
TCCCAAATATATATGATGAT+CGG 0.554179 2_3:+8614186 None:intergenic
AGTGGATAGTATGTATGCAA+TGG 0.556770 2_3:-8619061 Msa0276350:five_prime_UTR
TTTCAAATGCAACAAACTTG+GGG 0.558483 2_3:-8617102 Msa0276350:five_prime_UTR
TTGATCTTCACAGCATCAGA+TGG 0.562695 2_3:+8615051 None:intergenic
CACTGATGGAGATATTAAGC+AGG 0.563186 2_3:-8613666 Msa0276350:three_prime_UTR
TGAAAGGATGAGATGAGTTA+TGG 0.565427 2_3:-8618950 Msa0276350:five_prime_UTR
ATCAGTGATACATTTGACTC+TGG 0.565481 2_3:+8613682 None:intergenic
TATTAAACGCCTATAACCAA+TGG 0.565730 2_3:+8616434 None:intergenic
AAGTTTCTTGCTGAAAAGGA+AGG 0.565946 2_3:-8617653 Msa0276350:five_prime_UTR
AGTTCATTGAAAGCATAGAT+GGG 0.567377 2_3:+8615894 None:intergenic
CGAAGAAGTCAATTAAGACA+GGG 0.568898 2_3:-8613564 Msa0276350:three_prime_UTR
TGAAACATCCGGTGGTTGAG+AGG 0.570553 2_3:-8617434 Msa0276350:five_prime_UTR
CTTGCTTGATGTATCTGTGA+GGG 0.571405 2_3:+8618253 None:intergenic
ATTAAGGCTCACCTTCATCC+TGG 0.572237 2_3:-8616307 Msa0276350:five_prime_UTR
TTTGGACCTCCATGGGACAT+CGG 0.574097 2_3:-8613497 Msa0276350:three_prime_UTR
CGGCGCCGGTGAGGAAGAGT+AGG 0.585739 2_3:-8619469 Msa0276350:five_prime_UTR
TGGAGATTTAGAAGTTGAAG+TGG 0.585788 2_3:+8613702 None:intergenic
TGATGTATGATGTGAAATGA+TGG 0.587888 2_3:-8613532 Msa0276350:three_prime_UTR
TGCAAGCGGTGACCCTGTCA+AGG 0.589300 2_3:-8615405 Msa0276350:CDS
TCCTCTGACATCAACACTGA+AGG 0.589871 2_3:+8614143 None:intergenic
AAGGAAACGGTGAAGAGCAA+GGG 0.591278 2_3:-8619382 Msa0276350:five_prime_UTR
TTAGTATAGTACTATATAGG+TGG 0.591398 2_3:-8618641 Msa0276350:five_prime_UTR
AAAGGAAACGGTGAAGAGCA+AGG 0.593331 2_3:-8619383 Msa0276350:five_prime_UTR
TTGTTAAATAAAATTGTAGG+GGG 0.593520 2_3:-8614403 Msa0276350:three_prime_UTR
AACTCACAACTCTATAAGAG+AGG 0.593686 2_3:+8614926 None:intergenic
ATTATGGGACAAATATTCTG+TGG 0.596146 2_3:-8617684 Msa0276350:five_prime_UTR
GACTTGTCTTTACCTGCAAG+CGG 0.597345 2_3:-8615419 Msa0276350:CDS
TGTGAAGATCAATCTGAAGA+AGG 0.597643 2_3:-8615040 Msa0276350:CDS
TTTGTTAAATAAAATTGTAG+GGG 0.598200 2_3:-8614404 Msa0276350:three_prime_UTR
ATTGATGGGGAGAAAGGAAA+CGG 0.599048 2_3:-8619395 Msa0276350:five_prime_UTR
TTCACCTGCAATCTTGCACT+GGG 0.600210 2_3:+8617597 None:intergenic
TGTCGATGAAGAAGCCGAAG+AGG 0.600579 2_3:-8615378 Msa0276350:CDS
GAATAGTAATAACAATAATG+AGG 0.602247 2_3:-8618991 Msa0276350:five_prime_UTR
ATATTTGATATGCCACACAT+TGG 0.602377 2_3:-8614519 Msa0276350:CDS
AGAAAGAGCATTGAATTCAG+TGG 0.603658 2_3:-8619079 Msa0276350:five_prime_UTR
ACCTTCAGTGTTGATGTCAG+AGG 0.605071 2_3:-8614144 Msa0276350:three_prime_UTR
GCAGCAGGATACAACTGGGA+TGG 0.605675 2_3:-8615202 Msa0276350:CDS
ATGATGAATGCTGATGACTT+AGG 0.609577 2_3:+8616493 None:intergenic
AGCTCCTGTTGATGATACCC+AGG 0.611990 2_3:-8616086 Msa0276350:intron
CAATAATGAGGAGATGGTGA+AGG 0.612556 2_3:-8618979 Msa0276350:five_prime_UTR
TTTCTCCTACTCTTCCTCAC+CGG 0.612815 2_3:+8619464 None:intergenic
TCCTGGTGGAATGGAGCCAG+AGG 0.614695 2_3:-8616290 Msa0276350:five_prime_UTR
ATGGTGAAGGTGAAGATGAA+AGG 0.618034 2_3:-8618966 Msa0276350:five_prime_UTR
TAAAATGTTAGTAGCAGCTG+AGG 0.618436 2_3:-8618448 Msa0276350:intron
CGATGATGAGGACAATGACA+AGG 0.619728 2_3:-8615474 Msa0276350:CDS
TCAACACTCCATCGCGAACA+CGG 0.621130 2_3:+8618191 None:intergenic
GAAGCATGAGAATGATGCCA+AGG 0.622765 2_3:+8618855 None:intergenic
TCAAAAGCATGGATCAAGCA+AGG 0.624049 2_3:-8614210 Msa0276350:three_prime_UTR
AAGACCAACTCCATCAGCAA+TGG 0.627189 2_3:-8615230 Msa0276350:CDS
ATTGATAAACAACTTTGACC+CGG 0.627458 2_3:+8617458 None:intergenic
ACTCACAACTCTATAAGAGA+GGG 0.630084 2_3:+8614927 None:intergenic
TCTTTATCCGTAAACATCTG+CGG 0.632377 2_3:+8615003 None:intergenic
TTCAAATGCAACAAACTTGG+GGG 0.632464 2_3:-8617101 Msa0276350:five_prime_UTR
TAGCAAGAAAGAATCATCCA+TGG 0.634446 2_3:+8616700 None:intergenic
TCTTGCTTGATGTATCTGTG+AGG 0.638108 2_3:+8618252 None:intergenic
GACTGAAGATGAAAGCAGCA+GGG 0.640721 2_3:-8614726 Msa0276350:CDS
CGTAGAATCTCCAAACAAGT+CGG 0.644113 2_3:+8616521 None:intergenic
TCAGCTGATCCATGTAAGTG+TGG 0.647244 2_3:+8615440 None:intergenic
GTGTTCGCGATGGAGTGTTG+AGG 0.648666 2_3:-8618189 Msa0276350:five_prime_UTR
ATCAGCATTCATCATACCAG+AGG 0.649150 2_3:-8616485 Msa0276350:five_prime_UTR
CTACTCCAGAAACTTAATTG+CGG 0.654037 2_3:-8615174 Msa0276350:CDS
AAGGCTCACCTTCATCCTGG+TGG 0.655440 2_3:-8616304 Msa0276350:five_prime_UTR
CATCGACAAAAGCCTTGACA+GGG 0.655621 2_3:+8615393 None:intergenic
AGGAAACGGTGAAGAGCAAG+GGG 0.657415 2_3:-8619381 Msa0276350:five_prime_UTR
ATCATCTGATGAGGAAACTG+AGG 0.662710 2_3:-8614968 Msa0276350:CDS
ACTGAAGATGAAAGCAGCAG+GGG 0.664635 2_3:-8614725 Msa0276350:CDS
TTGAGCACAAGATTGGTACA+CGG 0.672007 2_3:+8617821 None:intergenic
ACTTTACATTTATCCCATGG+AGG 0.673211 2_3:+8613466 None:intergenic
GTTCATTGAAAGCATAGATG+GGG 0.673358 2_3:+8615895 None:intergenic
CTGATGAGGAAACTGAGGAG+TGG 0.674721 2_3:-8614963 Msa0276350:CDS
TGAATGCTGATGACTTAGGT+TGG 0.678310 2_3:+8616497 None:intergenic
CCAAGATGGAGATTTCAAAG+TGG 0.679020 2_3:-8618004 Msa0276350:five_prime_UTR
TTGAGCAGCAGGATACAACT+GGG 0.682128 2_3:-8615206 Msa0276350:CDS
TGCATATGTATCATCTGATG+AGG 0.684397 2_3:-8614977 Msa0276350:CDS
GAAGAAGTCAATTAAGACAG+GGG 0.696735 2_3:-8613563 Msa0276350:three_prime_UTR
GATAAAGAAAGGAACAAAGG+GGG 0.697638 2_3:-8618231 Msa0276350:five_prime_UTR
AGATAAAGAAAGGAACAAAG+GGG 0.697836 2_3:-8618232 Msa0276350:five_prime_UTR
ACAGAACGACGAAATTGATG+GGG 0.699911 2_3:-8619408 Msa0276350:five_prime_UTR
TATCAATTTGAAACATCCGG+TGG 0.700893 2_3:-8617442 Msa0276350:five_prime_UTR
TGAAGTTGAAGAGGAAGACG+AGG 0.701412 2_3:-8615127 Msa0276350:CDS
AAACGTCTAAGAGGTCTAGG+TGG 0.706543 2_3:+8618825 None:intergenic
GTAAGAGAAAGGGAAAGTGA+CGG 0.710423 2_3:-8619502 Msa0276350:five_prime_UTR
AAACCTAGAACTGATGACTG+AGG 0.723563 2_3:+8616358 None:intergenic
GGAGAAGAAAGGGAAAACGG+CGG 0.773958 2_3:-8619563 Msa0276350:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGTTAAATAAAATTGT+AGG - chr2_3:8618450-8618469 Msa0276350:five_prime_UTR 10.0%
!!! ATTTGTTAAATAAAATTGTA+GGG - chr2_3:8618451-8618470 Msa0276350:five_prime_UTR 10.0%
!! AAAAAATTAATCAATCAAAC+AGG + chr2_3:8613623-8613642 None:intergenic 15.0%
!!! TTGTTTTTTCTTTCTTTAAA+AGG - chr2_3:8614090-8614109 Msa0276350:intron 15.0%
!! TAATTAGTATAGTACTATAT+AGG - chr2_3:8614212-8614231 Msa0276350:three_prime_UTR 15.0%
!!! GTTATTGATTTTTAGTATTT+TGG - chr2_3:8614783-8614802 Msa0276350:intron 15.0%
!! TACAACAAATTTAAACAATT+AGG + chr2_3:8614904-8614923 None:intergenic 15.0%
!!! TTGTTTAAATTTGTTGTATT+TGG - chr2_3:8614906-8614925 Msa0276350:intron 15.0%
!!! TTTTTTCTTTAAGAAATCAT+TGG - chr2_3:8614963-8614982 Msa0276350:CDS 15.0%
!! GCAAAAATAAAAATTGAAAT+TGG - chr2_3:8615569-8615588 Msa0276350:intron 15.0%
!!! AGATTTTATTATACACAAAT+TGG - chr2_3:8615844-8615863 Msa0276350:intron 15.0%
!!! AAAATTACCAATATCTTTTT+AGG + chr2_3:8616263-8616282 None:intergenic 15.0%
!!! TTAATATTCTTTCTTTTTTG+TGG - chr2_3:8616439-8616458 Msa0276350:five_prime_UTR 15.0%
!! ACATAAAGTATGTTTATTAA+AGG - chr2_3:8616654-8616673 Msa0276350:intron 15.0%
!! AATAAATGATATTAAAGAAG+AGG - chr2_3:8616896-8616915 Msa0276350:intron 15.0%
!!! TTTTATTTAACAAATTTGCT+GGG + chr2_3:8618446-8618465 None:intergenic 15.0%
!!! ATTTTATTTAACAAATTTGC+TGG + chr2_3:8618447-8618466 None:intergenic 15.0%
!! TTTGTTAAATAAAATTGTAG+GGG - chr2_3:8618452-8618471 Msa0276350:five_prime_UTR 15.0%
!!! ATATTTCAGTTATCTTTTAT+CGG - chr2_3:8618593-8618612 Msa0276350:intron 15.0%
!! GTTTAAATAGCATTTAAAAA+AGG + chr2_3:8618990-8619009 None:intergenic 15.0%
!!! TAATTTTTTGATCAATTGAG+AGG - chr2_3:8613634-8613653 Msa0276350:three_prime_UTR 20.0%
!! ATATATAATGAAACAGTATG+TGG - chr2_3:8613741-8613760 Msa0276350:three_prime_UTR 20.0%
!! GAATAGTAATAACAATAATG+AGG - chr2_3:8613865-8613884 Msa0276350:intron 20.0%
!! GAAAGAAAAAACAAATGATT+TGG + chr2_3:8614084-8614103 None:intergenic 20.0%
!!! TTTTTGCATGTCTATAAAAT+TGG - chr2_3:8614759-8614778 Msa0276350:intron 20.0%
!! AATTATATAGATGCTAATGA+AGG - chr2_3:8614935-8614954 Msa0276350:CDS 20.0%
!! ATTATATAGATGCTAATGAA+GGG - chr2_3:8614936-8614955 Msa0276350:CDS 20.0%
!!! ATTTTGGACATTTACTATTT+TGG - chr2_3:8615283-8615302 Msa0276350:intron 20.0%
!! ACAAAACAACTAAAAAGATA+AGG + chr2_3:8616124-8616143 None:intergenic 20.0%
!! TCTAAATCCTAAAAAGATAT+TGG - chr2_3:8616253-8616272 Msa0276350:five_prime_UTR 20.0%
!!! AGATATTGGTAATTTTCTAT+AGG - chr2_3:8616267-8616286 Msa0276350:five_prime_UTR 20.0%
!!! GATATTGGTAATTTTCTATA+GGG - chr2_3:8616268-8616287 Msa0276350:five_prime_UTR 20.0%
!! ATTATTCAATTGAAATCCAT+TGG - chr2_3:8616406-8616425 Msa0276350:five_prime_UTR 20.0%
!!! TTTATTTGTCTTTGATTTCT+AGG - chr2_3:8616854-8616873 Msa0276350:intron 20.0%
!! ATAAACTATAATCCTTACTT+TGG - chr2_3:8617137-8617156 Msa0276350:intron 20.0%
!! TAAACTATAATCCTTACTTT+GGG - chr2_3:8617138-8617157 Msa0276350:intron 20.0%
!! TCAAAATTGTAATATGTAAC+AGG - chr2_3:8618082-8618101 Msa0276350:intron 20.0%
!! TAAAATTAACAGATCTTACA+TGG + chr2_3:8618218-8618237 None:intergenic 20.0%
!!! ATTTTAGTATTTCACGAAAT+TGG - chr2_3:8618232-8618251 Msa0276350:five_prime_UTR 20.0%
!!! TTGATGATTTAGTTATGTTT+TGG + chr2_3:8618363-8618382 None:intergenic 20.0%
!! ATAACTAAATCATCAAAGAT+AGG - chr2_3:8618367-8618386 Msa0276350:intron 20.0%
!! TTGTTAAATAAAATTGTAGG+GGG - chr2_3:8618453-8618472 Msa0276350:five_prime_UTR 20.0%
!! ATGCTAAACATAAATTTAGT+TGG + chr2_3:8618890-8618909 None:intergenic 20.0%
!! AATTCCAAAACAATCATTAA+CGG + chr2_3:8619555-8619574 None:intergenic 20.0%
!! TGGTATATTTTGCTCTTTTA+TGG - chr2_3:8613558-8613577 Msa0276350:three_prime_UTR 25.0%
!! TGTTTTCTTCATTCCTTTTT+TGG - chr2_3:8613662-8613681 Msa0276350:three_prime_UTR 25.0%
!!! ATTCCTTTTTTGGTTAATTG+AGG - chr2_3:8613672-8613691 Msa0276350:three_prime_UTR 25.0%
! TAATAACAATAATGAGGAGA+TGG - chr2_3:8613871-8613890 Msa0276350:intron 25.0%
! ATCACAATCATAATAAAGCA+GGG + chr2_3:8614134-8614153 None:intergenic 25.0%
! TATCACAATCATAATAAAGC+AGG + chr2_3:8614135-8614154 None:intergenic 25.0%
! TTAGTATAGTACTATATAGG+TGG - chr2_3:8614215-8614234 Msa0276350:three_prime_UTR 25.0%
!!! ATTCTACTTGAGAACTTTTT+TGG - chr2_3:8614253-8614272 Msa0276350:three_prime_UTR 25.0%
! AAACACAAGAAAATGAAAAC+AGG + chr2_3:8614503-8614522 None:intergenic 25.0%
!!! GAATGCATTTTAGAATTTGA+TGG - chr2_3:8614541-8614560 Msa0276350:intron 25.0%
! AAGATAAAGAAAGGAACAAA+GGG - chr2_3:8614623-8614642 Msa0276350:intron 25.0%
!!! CTTTGTTTGTGTCATTTTTT+TGG - chr2_3:8615328-8615347 Msa0276350:intron 25.0%
!!! GGTTCTTATTTTTCAGATAA+CGG - chr2_3:8615349-8615368 Msa0276350:CDS 25.0%
!! GTTTATCAATTTGAAACATC+CGG - chr2_3:8615411-8615430 Msa0276350:CDS 25.0%
! TAGTAGCTCAAATTAAGTTT+GGG - chr2_3:8615686-8615705 Msa0276350:intron 25.0%
! CTGTCAAATTGAATTTGATT+CGG - chr2_3:8616034-8616053 Msa0276350:intron 25.0%
!!! TCTTTTTAGTTGTTTTGTCT+AGG - chr2_3:8616126-8616145 Msa0276350:intron 25.0%
! ATTCTTTCTTGCTAGAAAAT+CGG - chr2_3:8616165-8616184 Msa0276350:intron 25.0%
!! AATTGAAATCCATTGGTTAT+AGG - chr2_3:8616413-8616432 Msa0276350:five_prime_UTR 25.0%
!!! TATTCTTTCTTTTTTGTGGT+AGG - chr2_3:8616443-8616462 Msa0276350:five_prime_UTR 25.0%
!!! AAGAAAGCATCTGAATAAAT+GGG + chr2_3:8616806-8616825 None:intergenic 25.0%
!!! TAAGAAAGCATCTGAATAAA+TGG + chr2_3:8616807-8616826 None:intergenic 25.0%
! ACTAAATCTGAAGATAACAA+AGG + chr2_3:8617043-8617062 None:intergenic 25.0%
! ATAGACAATGAAACTTTATG+TGG + chr2_3:8617080-8617099 None:intergenic 25.0%
! TAGCTATATGGTTGTTAATT+TGG - chr2_3:8617168-8617187 Msa0276350:intron 25.0%
!!! GTTAATTTGGATTTTTACGT+TGG - chr2_3:8617181-8617200 Msa0276350:intron 25.0%
!! ATTTTTACGTTGGAAAATTC+TGG - chr2_3:8617191-8617210 Msa0276350:intron 25.0%
! AATGATGAGAAAGTAAATGA+TGG - chr2_3:8617220-8617239 Msa0276350:intron 25.0%
!!! AAAAGGCAAAGGTTTTTTAA+AGG + chr2_3:8617275-8617294 None:intergenic 25.0%
! TACACTATGGAAGAATTAAA+AGG + chr2_3:8617292-8617311 None:intergenic 25.0%
!!! TTTTAATTCTTCCATAGTGT+AGG - chr2_3:8617291-8617310 Msa0276350:intron 25.0%
!!! ATTTTTAACTTCCAGAACAA+TGG + chr2_3:8617334-8617353 None:intergenic 25.0%
! CTTAATGATATGATAACAAC+TGG - chr2_3:8617575-8617594 Msa0276350:intron 25.0%
! TCCGATCATCATATATATTT+GGG - chr2_3:8618669-8618688 Msa0276350:intron 25.0%
! TCCCAAATATATATGATGAT+CGG + chr2_3:8618673-8618692 None:intergenic 25.0%
! TAGCATAATTCATAGAAGAA+TGG + chr2_3:8618809-8618828 None:intergenic 25.0%
! TTCATCAGTTGAAATTCATA+TGG - chr2_3:8618862-8618881 Msa0276350:five_prime_UTR 25.0%
! AATAGCATTTAAAAAAGGAG+AGG + chr2_3:8618985-8619004 None:intergenic 25.0%
! ATTTGTTCTGTGTATTTCTT+TGG + chr2_3:8619131-8619150 None:intergenic 25.0%
! TGTGAAATGATGGTATTAAT+CGG - chr2_3:8619334-8619353 Msa0276350:intron 25.0%
! GCTGAAAAAAAGAAATCAAA+AGG + chr2_3:8619478-8619497 None:intergenic 25.0%
TGCTTGCATGTTTAGATTAT+TGG - chr2_3:8613538-8613557 Msa0276350:three_prime_UTR 30.0%
! TTTTTCTCTGCTTCTTCTAT+TGG - chr2_3:8613597-8613616 Msa0276350:three_prime_UTR 30.0%
CAACCTCAATTAACCAAAAA+AGG + chr2_3:8613678-8613697 None:intergenic 30.0%
TTTGTTTGTATGCAAAACAG+TGG - chr2_3:8614175-8614194 Msa0276350:three_prime_UTR 30.0%
! AACCTCATATAACATTTTGC+AGG - chr2_3:8614347-8614366 Msa0276350:three_prime_UTR 30.0%
TTCCTGCAAAATGTTATATG+AGG + chr2_3:8614352-8614371 None:intergenic 30.0%
!! ATTCTAAAATGCATTCGAGT+TGG + chr2_3:8614537-8614556 None:intergenic 30.0%
ACATCAAGCAAGATAAAGAA+AGG - chr2_3:8614614-8614633 Msa0276350:intron 30.0%
CAAGATAAAGAAAGGAACAA+AGG - chr2_3:8614622-8614641 Msa0276350:intron 30.0%
AGATAAAGAAAGGAACAAAG+GGG - chr2_3:8614624-8614643 Msa0276350:intron 30.0%
! TTTTAGTGACATACATGTGA+AGG + chr2_3:8614724-8614743 None:intergenic 30.0%
TAAATCGGAATTCATTTCAG+AGG + chr2_3:8614816-8614835 None:intergenic 30.0%
ATTCCGATTTAAGTCCTTTA+AGG - chr2_3:8614825-8614844 Msa0276350:intron 30.0%
TCTCCTTAAAGGACTTAAAT+CGG + chr2_3:8614831-8614850 None:intergenic 30.0%
! TTCAAAGTGGATGTTTTGTA+TGG - chr2_3:8614865-8614884 Msa0276350:intron 30.0%
ATAGTAAAGTCGACGTTATT+TGG - chr2_3:8614999-8615018 Msa0276350:CDS 30.0%
ATTATGGGACAAATATTCTG+TGG - chr2_3:8615172-8615191 Msa0276350:CDS 30.0%
TGAGTTAATATCAACACAAC+AGG + chr2_3:8615237-8615256 None:intergenic 30.0%
! AAGATTGCAGGTGAATATTT+TGG - chr2_3:8615267-8615286 Msa0276350:intron 30.0%
ATTGATAAACAACTTTGACC+CGG + chr2_3:8615401-8615420 None:intergenic 30.0%
! ACTTCAAGTTTCATATTGCA+TGG + chr2_3:8615667-8615686 None:intergenic 30.0%
GTAGTAGCTCAAATTAAGTT+TGG - chr2_3:8615685-8615704 Msa0276350:intron 30.0%
GTTTCAAATGCAACAAACTT+GGG - chr2_3:8615753-8615772 Msa0276350:intron 30.0%
TTTCAAATGCAACAAACTTG+GGG - chr2_3:8615754-8615773 Msa0276350:intron 30.0%
AATTGACATTTCATTGCTTG+TGG - chr2_3:8615805-8615824 Msa0276350:intron 30.0%
GTATAAAAGAAAGTTGCATG+TGG - chr2_3:8615866-8615885 Msa0276350:CDS 30.0%
TTCTTTCTTGCTAGAAAATC+GGG - chr2_3:8616166-8616185 Msa0276350:intron 30.0%
TAATAAAGCACAATTTCCTC+TGG + chr2_3:8616390-8616409 None:intergenic 30.0%
TATTAAACGCCTATAACCAA+TGG + chr2_3:8616425-8616444 None:intergenic 30.0%
! TTAATTTTCTCAATCACAGC+AGG + chr2_3:8616534-8616553 None:intergenic 30.0%
TGCTGTGATTGAGAAAATTA+AGG - chr2_3:8616533-8616552 Msa0276350:five_prime_UTR 30.0%
GAGTTCAACTAAATTCTCAA+TGG + chr2_3:8616608-8616627 None:intergenic 30.0%
! TCAAAGACAAATAAAGCACT+TGG + chr2_3:8616849-8616868 None:intergenic 30.0%
! AGTTCATTGAAAGCATAGAT+GGG + chr2_3:8616965-8616984 None:intergenic 30.0%
! AAGTTCATTGAAAGCATAGA+TGG + chr2_3:8616966-8616985 None:intergenic 30.0%
AATCAGCAACATGAAACAAA+TGG + chr2_3:8617112-8617131 None:intergenic 30.0%
ATGGAAGAATTAAAAGGCAA+AGG + chr2_3:8617286-8617305 None:intergenic 30.0%
! TGATGATGATGATGATATCA+AGG - chr2_3:8617550-8617569 Msa0276350:intron 30.0%
!! TTGGTCTTTTCTCTATCAAT+TGG + chr2_3:8617614-8617633 None:intergenic 30.0%
!!! TATTGCTGTCACTTTGATTT+TGG - chr2_3:8617980-8617999 Msa0276350:intron 30.0%
CAAGATTATGACAATGCTAA+CGG - chr2_3:8618287-8618306 Msa0276350:five_prime_UTR 30.0%
AATGTGTGGCATATCAAATA+TGG + chr2_3:8618338-8618357 None:intergenic 30.0%
ATATTTGATATGCCACACAT+TGG - chr2_3:8618337-8618356 Msa0276350:intron 30.0%
!! TAACAAATTTGCTGGGATAA+AGG + chr2_3:8618439-8618458 None:intergenic 30.0%
!! TAAAAACAGTTTTGTGGTTC+AGG + chr2_3:8618519-8618538 None:intergenic 30.0%
! TGCTGATAAAAACAGTTTTG+TGG + chr2_3:8618525-8618544 None:intergenic 30.0%
GTCCGATCATCATATATATT+TGG - chr2_3:8618668-8618687 Msa0276350:intron 30.0%
TAATACTACTAGAACTGTGA+TGG - chr2_3:8618934-8618953 Msa0276350:five_prime_UTR 30.0%
GGTTGTATCTCAGATTATAA+GGG - chr2_3:8619071-8619090 Msa0276350:five_prime_UTR 30.0%
AATTTGGCAGAAACAACTTT+GGG + chr2_3:8619108-8619127 None:intergenic 30.0%
!! CTGTGTATTTCTTTGGAATT+TGG + chr2_3:8619124-8619143 None:intergenic 30.0%
TGATGTATGATGTGAAATGA+TGG - chr2_3:8619324-8619343 Msa0276350:intron 30.0%
!! TGATGGTATTAATCGGTTTT+TGG - chr2_3:8619341-8619360 Msa0276350:intron 30.0%
TAGACTTTACATTTATCCCA+TGG + chr2_3:8619396-8619415 None:intergenic 30.0%
TGTCTCAGTTTGCATATAAT+TGG + chr2_3:8619451-8619470 None:intergenic 30.0%
! GTTTCCGTTAATGATTGTTT+TGG - chr2_3:8619548-8619567 Msa0276350:five_prime_UTR 30.0%
AAAGAAAAGGGAGAGAGAAA+CGG - chr2_3:8613265-8613284 Msa0276350:three_prime_UTR 35.0%
GAAAAACTGCGTAAGAGAAA+GGG - chr2_3:8613344-8613363 Msa0276350:three_prime_UTR 35.0%
TAACAGAACGACGAAATTGA+TGG - chr2_3:8613446-8613465 Msa0276350:three_prime_UTR 35.0%
AACAGAACGACGAAATTGAT+GGG - chr2_3:8613447-8613466 Msa0276350:three_prime_UTR 35.0%
ATGTGTGGAAAATTGGGTTT+AGG - chr2_3:8613699-8613718 Msa0276350:three_prime_UTR 35.0%
TGTGTGGAAAATTGGGTTTA+GGG - chr2_3:8613700-8613719 Msa0276350:three_prime_UTR 35.0%
!! AGAAAGAGCATTGAATTCAG+TGG - chr2_3:8613777-8613796 Msa0276350:intron 35.0%
AGTGGATAGTATGTATGCAA+TGG - chr2_3:8613795-8613814 Msa0276350:intron 35.0%
GTGGATAGTATGTATGCAAT+GGG - chr2_3:8613796-8613815 Msa0276350:intron 35.0%
TGAAAGGATGAGATGAGTTA+TGG - chr2_3:8613906-8613925 Msa0276350:intron 35.0%
! TGAGTTATGGTGTTTAGAGT+TGG - chr2_3:8613919-8613938 Msa0276350:intron 35.0%
! CATTTTGCAGGAAAGAAACT+AGG - chr2_3:8614359-8614378 Msa0276350:three_prime_UTR 35.0%
TAAAATGTTAGTAGCAGCTG+AGG - chr2_3:8614408-8614427 Msa0276350:three_prime_UTR 35.0%
AAAGGAGATCCATATCCTAT+AGG + chr2_3:8614581-8614600 None:intergenic 35.0%
GATAAAGAAAGGAACAAAGG+GGG - chr2_3:8614625-8614644 Msa0276350:intron 35.0%
TTTGTCTTTGAGCACAAGAT+TGG + chr2_3:8615045-8615064 None:intergenic 35.0%
! GCGTAAGATTTTCTGATTTC+AGG - chr2_3:8615065-8615084 Msa0276350:CDS 35.0%
TCGATTATGCAGTGGAAATT+TGG - chr2_3:8615139-8615158 Msa0276350:CDS 35.0%
ATTTGGTCGATGCAACATTA+TGG - chr2_3:8615156-8615175 Msa0276350:CDS 35.0%
TTTGGTCGATGCAACATTAT+GGG - chr2_3:8615157-8615176 Msa0276350:CDS 35.0%
GATGAAGTTTCTTGCTGAAA+AGG - chr2_3:8615199-8615218 Msa0276350:CDS 35.0%
AAGTTTCTTGCTGAAAAGGA+AGG - chr2_3:8615203-8615222 Msa0276350:CDS 35.0%
ACAAACAAAGTGACGAACAA+CGG + chr2_3:8615318-8615337 None:intergenic 35.0%
! TATCAATTTGAAACATCCGG+TGG - chr2_3:8615414-8615433 Msa0276350:CDS 35.0%
! TGCTCTGGATGTTAATTGTT+GGG - chr2_3:8615470-8615489 Msa0276350:CDS 35.0%
GATGTTAATTGTTGGGAAAG+TGG - chr2_3:8615477-8615496 Msa0276350:CDS 35.0%
TAATTGTTGGGAAAGTGGTA+TGG - chr2_3:8615482-8615501 Msa0276350:CDS 35.0%
!! GGTAGATTGTTTGCTATGAA+TGG - chr2_3:8615707-8615726 Msa0276350:intron 35.0%
!! AGATTGTTTGCTATGAATGG+TGG - chr2_3:8615710-8615729 Msa0276350:intron 35.0%
GGTTTCAAATGCAACAAACT+TGG - chr2_3:8615752-8615771 Msa0276350:intron 35.0%
TTCAAATGCAACAAACTTGG+GGG - chr2_3:8615755-8615774 Msa0276350:intron 35.0%
!! GGGTTTGCTCAACTTTATTT+TGG - chr2_3:8615775-8615794 Msa0276350:intron 35.0%
TCAATTTGACAGATGATGCA+TGG + chr2_3:8616026-8616045 None:intergenic 35.0%
TTTCTATGATATGCAGTGTC+AGG - chr2_3:8616061-8616080 Msa0276350:intron 35.0%
TTCTATGATATGCAGTGTCA+GGG - chr2_3:8616062-8616081 Msa0276350:intron 35.0%
TAGCAAGAAAGAATCATCCA+TGG + chr2_3:8616159-8616178 None:intergenic 35.0%
! TAGAAAATCGGGCAATTTTG+AGG - chr2_3:8616177-8616196 Msa0276350:intron 35.0%
! AGAAAATCGGGCAATTTTGA+GGG - chr2_3:8616178-8616197 Msa0276350:intron 35.0%
! AATTTTCTATAGGGCTGAGT+TGG - chr2_3:8616277-8616296 Msa0276350:five_prime_UTR 35.0%
! ATTTTCTATAGGGCTGAGTT+GGG - chr2_3:8616278-8616297 Msa0276350:five_prime_UTR 35.0%
ATGATGAATGCTGATGACTT+AGG + chr2_3:8616366-8616385 None:intergenic 35.0%
AAATGGGTGACATAATACCT+GGG + chr2_3:8616790-8616809 None:intergenic 35.0%
TAAATGGGTGACATAATACC+TGG + chr2_3:8616791-8616810 None:intergenic 35.0%
CTTATTCAACTTCCCATTGA+GGG + chr2_3:8616922-8616941 None:intergenic 35.0%
! GTTCATTGAAAGCATAGATG+GGG + chr2_3:8616964-8616983 None:intergenic 35.0%
AATTGAAGAGTCCTACACTA+TGG + chr2_3:8617305-8617324 None:intergenic 35.0%
! CAATTTGCTTTCCATTGTTC+TGG - chr2_3:8617320-8617339 Msa0276350:intron 35.0%
CATCACCTTCTTCATTATCT+TGG + chr2_3:8617535-8617554 None:intergenic 35.0%
CTACTCCAGAAACTTAATTG+CGG - chr2_3:8617682-8617701 Msa0276350:five_prime_UTR 35.0%
TTGAACCGCAATTAAGTTTC+TGG + chr2_3:8617690-8617709 None:intergenic 35.0%
TGTGAAGATCAATCTGAAGA+AGG - chr2_3:8617816-8617835 Msa0276350:five_prime_UTR 35.0%
TCTTTATCCGTAAACATCTG+CGG + chr2_3:8617856-8617875 None:intergenic 35.0%
TGCATATGTATCATCTGATG+AGG - chr2_3:8617879-8617898 Msa0276350:five_prime_UTR 35.0%
ACTCACAACTCTATAAGAGA+GGG + chr2_3:8617932-8617951 None:intergenic 35.0%
AACTCACAACTCTATAAGAG+AGG + chr2_3:8617933-8617952 None:intergenic 35.0%
GTTCCTGATACCAAGATAAA+AGG - chr2_3:8618185-8618204 Msa0276350:five_prime_UTR 35.0%
! CTTCCTTTTATCTTGGTATC+AGG + chr2_3:8618191-8618210 None:intergenic 35.0%
! TGGAGTTCTTCCTTTTATCT+TGG + chr2_3:8618198-8618217 None:intergenic 35.0%
TCATAATCTTGAAGCCTGAT+TGG + chr2_3:8618278-8618297 None:intergenic 35.0%
GTTTAGCATGCATGATTTAG+TGG - chr2_3:8618901-8618920 Msa0276350:five_prime_UTR 35.0%
CGGTTGTATCTCAGATTATA+AGG - chr2_3:8619070-8619089 Msa0276350:five_prime_UTR 35.0%
GAATTTGGCAGAAACAACTT+TGG + chr2_3:8619109-8619128 None:intergenic 35.0%
TGGAGATTTAGAAGTTGAAG+TGG + chr2_3:8619157-8619176 None:intergenic 35.0%
ATCAGTGATACATTTGACTC+TGG + chr2_3:8619177-8619196 None:intergenic 35.0%
AGAGTCAAATGTATCACTGA+TGG - chr2_3:8619176-8619195 Msa0276350:intron 35.0%
ACAACGCTTTGTAAGATTTG+AGG + chr2_3:8619217-8619236 None:intergenic 35.0%
ACGAAGAAGTCAATTAAGAC+AGG - chr2_3:8619291-8619310 Msa0276350:intron 35.0%
CGAAGAAGTCAATTAAGACA+GGG - chr2_3:8619292-8619311 Msa0276350:intron 35.0%
GAAGAAGTCAATTAAGACAG+GGG - chr2_3:8619293-8619312 Msa0276350:intron 35.0%
ACTTTACATTTATCCCATGG+AGG + chr2_3:8619393-8619412 None:intergenic 35.0%
!!! TTTTTTCAGCTCGAGACTTA+TGG - chr2_3:8619488-8619507 Msa0276350:five_prime_UTR 35.0%
AAGAAAAGGGAGAGAGAAAC+GGG - chr2_3:8613266-8613285 Msa0276350:three_prime_UTR 40.0%
CGAAAAACTGCGTAAGAGAA+AGG - chr2_3:8613343-8613362 Msa0276350:three_prime_UTR 40.0%
GTAAGAGAAAGGGAAAGTGA+CGG - chr2_3:8613354-8613373 Msa0276350:three_prime_UTR 40.0%
ACAGAACGACGAAATTGATG+GGG - chr2_3:8613448-8613467 Msa0276350:three_prime_UTR 40.0%
ATTGATGGGGAGAAAGGAAA+CGG - chr2_3:8613461-8613480 Msa0276350:three_prime_UTR 40.0%
CTAAACATGCAAGCAGATGA+AGG + chr2_3:8613533-8613552 None:intergenic 40.0%
GTTAATTGAGGTTGCATGTG+TGG - chr2_3:8613684-8613703 Msa0276350:three_prime_UTR 40.0%
AGGTTGCATGTGTGGAAAAT+TGG - chr2_3:8613692-8613711 Msa0276350:three_prime_UTR 40.0%
GGTTGCATGTGTGGAAAATT+GGG - chr2_3:8613693-8613712 Msa0276350:three_prime_UTR 40.0%
! GGTTTAGGGTTCTTGATTCA+TGG - chr2_3:8613714-8613733 Msa0276350:three_prime_UTR 40.0%
TGCAATGGGACAAGTGTAAA+TGG - chr2_3:8613810-8613829 Msa0276350:intron 40.0%
CAATAATGAGGAGATGGTGA+AGG - chr2_3:8613877-8613896 Msa0276350:intron 40.0%
ATGGTGAAGGTGAAGATGAA+AGG - chr2_3:8613890-8613909 Msa0276350:intron 40.0%
! GTTATGGTGTTTAGAGTTGG+TGG - chr2_3:8613922-8613941 Msa0276350:intron 40.0%
!! TGTTTAGAGTTGGTGGTTTC+TGG - chr2_3:8613929-8613948 Msa0276350:intron 40.0%
TCTGGTAACAAGATTAGTGC+AGG - chr2_3:8613947-8613966 Msa0276350:intron 40.0%
AAGATTAGTGCAGGAAGTGA+TGG - chr2_3:8613956-8613975 Msa0276350:intron 40.0%
! GAAGTGATGGAAAAGTTGCT+TGG - chr2_3:8613969-8613988 Msa0276350:intron 40.0%
TTGCTTGGAGATAAACTCCT+TGG - chr2_3:8613984-8614003 Msa0276350:intron 40.0%
AAGAAACGTCTAAGAGGTCT+AGG + chr2_3:8614037-8614056 None:intergenic 40.0%
ACCTCTTAGACGTTTCTTAC+AGG - chr2_3:8614039-8614058 Msa0276350:intron 40.0%
ACCTGTAAGAAACGTCTAAG+AGG + chr2_3:8614043-8614062 None:intergenic 40.0%
! TAGAATTTGATGGCAGCAGT+TGG - chr2_3:8614551-8614570 Msa0276350:intron 40.0%
! AGAATTTGATGGCAGCAGTT+GGG - chr2_3:8614552-8614571 Msa0276350:intron 40.0%
GTTGGGATACCTATAGGATA+TGG - chr2_3:8614569-8614588 Msa0276350:intron 40.0%
CTTGCTTGATGTATCTGTGA+GGG + chr2_3:8614606-8614625 None:intergenic 40.0%
TCTTGCTTGATGTATCTGTG+AGG + chr2_3:8614607-8614626 None:intergenic 40.0%
! TCCTTTAAGGAGATCCAAGA+TGG - chr2_3:8614838-8614857 Msa0276350:intron 40.0%
TCCATCTTGGATCTCCTTAA+AGG + chr2_3:8614842-8614861 None:intergenic 40.0%
!! CCACTTTGAAATCTCCATCT+TGG + chr2_3:8614855-8614874 None:intergenic 40.0%
CCAAGATGGAGATTTCAAAG+TGG - chr2_3:8614852-8614871 Msa0276350:intron 40.0%
AAGTCGACGTTATTTGGATC+TGG - chr2_3:8615005-8615024 Msa0276350:CDS 40.0%
TTGAGCACAAGATTGGTACA+CGG + chr2_3:8615038-8615057 None:intergenic 40.0%
! CAATGTTGTCGATTATGCAG+TGG - chr2_3:8615131-8615150 Msa0276350:CDS 40.0%
TTGCTGAAAAGGAAGGAAAC+AGG - chr2_3:8615210-8615229 Msa0276350:CDS 40.0%
CACCTAATCTTTGCAACAAC+TGG - chr2_3:8615374-8615393 Msa0276350:CDS 40.0%
GACCAGTTGTTGCAAAGATT+AGG + chr2_3:8615379-8615398 None:intergenic 40.0%
AATCTTTGCAACAACTGGTC+CGG - chr2_3:8615379-8615398 Msa0276350:CDS 40.0%
TAGGGCTAGGTAAGTTAACT+TGG - chr2_3:8615447-8615466 Msa0276350:CDS 40.0%
! GTGCTCTGGATGTTAATTGT+TGG - chr2_3:8615469-8615488 Msa0276350:CDS 40.0%
!! GAATGGTGGTTTGTGTTTTC+AGG - chr2_3:8615724-8615743 Msa0276350:intron 40.0%
!!! GGTTTGTGTTTTCAGGTATC+TGG - chr2_3:8615731-8615750 Msa0276350:intron 40.0%
AGAACATATTCCCTGCTGAT+TGG - chr2_3:8615908-8615927 Msa0276350:exon 40.0%
TCTATGATATGCAGTGTCAG+GGG - chr2_3:8616063-8616082 Msa0276350:intron 40.0%
TTTGTCTAGGTTCTTGACCA+TGG - chr2_3:8616139-8616158 Msa0276350:intron 40.0%
CGTAGAATCTCCAAACAAGT+CGG + chr2_3:8616338-8616357 None:intergenic 40.0%
TGAATGCTGATGACTTAGGT+TGG + chr2_3:8616362-8616381 None:intergenic 40.0%
ATCAGCATTCATCATACCAG+AGG - chr2_3:8616371-8616390 Msa0276350:five_prime_UTR 40.0%
AAACCTAGAACTGATGACTG+AGG + chr2_3:8616501-8616520 None:intergenic 40.0%
CATTGCTTACACTGAGTTTC+AGG - chr2_3:8616716-8616735 Msa0276350:intron 40.0%
TTACACTGAGTTTCAGGATG+TGG - chr2_3:8616722-8616741 Msa0276350:intron 40.0%
AATACCTGGGTATCATCAAC+AGG + chr2_3:8616777-8616796 None:intergenic 40.0%
ATTAAAGAAGAGGCCCTCAA+TGG - chr2_3:8616906-8616925 Msa0276350:intron 40.0%
TTAAAGAAGAGGCCCTCAAT+GGG - chr2_3:8616907-8616926 Msa0276350:intron 40.0%
GCTTATTCAACTTCCCATTG+AGG + chr2_3:8616923-8616942 None:intergenic 40.0%
AGATGGGGCAAACACTTATT+CGG + chr2_3:8616949-8616968 None:intergenic 40.0%
ACTTACACATCACCATCAAC+AGG + chr2_3:8617005-8617024 None:intergenic 40.0%
TTGGGATGAGCTTAGCTATA+TGG - chr2_3:8617156-8617175 Msa0276350:intron 40.0%
CTTGTCATTGTCCTCATCAT+CGG + chr2_3:8617384-8617403 None:intergenic 40.0%
!! CATTATCTTGGAAGCGTTGT+AGG + chr2_3:8617523-8617542 None:intergenic 40.0%
CGCTTCCAAGATAATGAAGA+AGG - chr2_3:8617527-8617546 Msa0276350:intron 40.0%
ATCTGACGATGAAGTTGAAG+AGG - chr2_3:8617720-8617739 Msa0276350:intron 40.0%
TTGATCTTCACAGCATCAGA+TGG + chr2_3:8617808-8617827 None:intergenic 40.0%
CTTTATCCGTAAACATCTGC+GGG + chr2_3:8617855-8617874 None:intergenic 40.0%
ATCATCTGATGAGGAAACTG+AGG - chr2_3:8617888-8617907 Msa0276350:intron 40.0%
TCTATAAGAGAGGGACTGTT+TGG + chr2_3:8617923-8617942 None:intergenic 40.0%
TTCCATCTTTGCATGCACTA+AGG - chr2_3:8618020-8618039 Msa0276350:five_prime_UTR 40.0%
TACCTTAGTGCATGCAAAGA+TGG + chr2_3:8618025-8618044 None:intergenic 40.0%
CTGATTGGTGTACATTGCAT+AGG + chr2_3:8618263-8618282 None:intergenic 40.0%
CTATGCAATGTACACCAATC+AGG - chr2_3:8618261-8618280 Msa0276350:five_prime_UTR 40.0%
ATGGCTGCAGCATACAATAA+TGG + chr2_3:8618319-8618338 None:intergenic 40.0%
!!! GTTATGTTTTGGCCAATGTG+TGG + chr2_3:8618352-8618371 None:intergenic 40.0%
ATGCCTTCTTCTCAAAAGCA+TGG - chr2_3:8618635-8618654 Msa0276350:five_prime_UTR 40.0%
!! GATCCATGCTTTTGAGAAGA+AGG + chr2_3:8618641-8618660 None:intergenic 40.0%
! TCAAAAGCATGGATCAAGCA+AGG - chr2_3:8618646-8618665 Msa0276350:five_prime_UTR 40.0%
GTCAGAGGATTCTTCAGATA+CGG - chr2_3:8618727-8618746 Msa0276350:intron 40.0%
GCATGATTTAGTGGAATCTG+TGG - chr2_3:8618910-8618929 Msa0276350:five_prime_UTR 40.0%
CACTGATGGAGATATTAAGC+AGG - chr2_3:8619190-8619209 Msa0276350:intron 40.0%
ACGGGAGAAGAAAGGGAAAA+CGG - chr2_3:8613290-8613309 Msa0276350:three_prime_UTR 45.0%
AAACGGGAAAGGGAGGAAAA+CGG - chr2_3:8613320-8613339 Msa0276350:three_prime_UTR 45.0%
GGGAAAGTGACGGTGAAAAA+CGG - chr2_3:8613364-8613383 Msa0276350:three_prime_UTR 45.0%
AAAGTGACGGTGAAAAACGG+CGG - chr2_3:8613367-8613386 Msa0276350:three_prime_UTR 45.0%
TTTCTCCTACTCTTCCTCAC+CGG + chr2_3:8613395-8613414 None:intergenic 45.0%
GTGAGGAAGAGTAGGAGAAA+GGG - chr2_3:8613395-8613414 Msa0276350:three_prime_UTR 45.0%
TAGGAGAAAGGGAAAGCGAT+GGG - chr2_3:8613406-8613425 Msa0276350:three_prime_UTR 45.0%
GACGAAATTGATGGGGAGAA+AGG - chr2_3:8613455-8613474 Msa0276350:three_prime_UTR 45.0%
AAAGGAAACGGTGAAGAGCA+AGG - chr2_3:8613473-8613492 Msa0276350:three_prime_UTR 45.0%
AAGGAAACGGTGAAGAGCAA+GGG - chr2_3:8613474-8613493 Msa0276350:three_prime_UTR 45.0%
! CGCGTTTTCTCATCAAAGGT+TGG - chr2_3:8613499-8613518 Msa0276350:three_prime_UTR 45.0%
AAACAGTATGTGGCTGCAGT+GGG - chr2_3:8613751-8613770 Msa0276350:three_prime_UTR 45.0%
! ATGGCAACAGAGTTTTCTGC+AGG - chr2_3:8613829-8613848 Msa0276350:intron 45.0%
! TGGCAACAGAGTTTTCTGCA+GGG - chr2_3:8613830-8613849 Msa0276350:intron 45.0%
! AGAGTTTTCTGCAGGGGAAA+AGG - chr2_3:8613837-8613856 Msa0276350:intron 45.0%
! GAGTTTTCTGCAGGGGAAAA+GGG - chr2_3:8613838-8613857 Msa0276350:intron 45.0%
! AGTTTTCTGCAGGGGAAAAG+GGG - chr2_3:8613839-8613858 Msa0276350:intron 45.0%
GAAGCATGAGAATGATGCCA+AGG + chr2_3:8614004-8614023 None:intergenic 45.0%
TGGCATCATTCTCATGCTTC+TGG - chr2_3:8614004-8614023 Msa0276350:intron 45.0%
CATCATTCTCATGCTTCTGG+TGG - chr2_3:8614007-8614026 Msa0276350:intron 45.0%
AAACGTCTAAGAGGTCTAGG+TGG + chr2_3:8614034-8614053 None:intergenic 45.0%
AGTAGCAGCTGAGGTATGTA+AGG - chr2_3:8614417-8614436 Msa0276350:three_prime_UTR 45.0%
GTAGCAGCTGAGGTATGTAA+GGG - chr2_3:8614418-8614437 Msa0276350:three_prime_UTR 45.0%
TAGCAGCTGAGGTATGTAAG+GGG - chr2_3:8614419-8614438 Msa0276350:three_prime_UTR 45.0%
GATGTATCTGTGAGGGTCAA+AGG + chr2_3:8614599-8614618 None:intergenic 45.0%
TTCACCTGCAATCTTGCACT+GGG + chr2_3:8615262-8615281 None:intergenic 45.0%
ATTCACCTGCAATCTTGCAC+TGG + chr2_3:8615263-8615282 None:intergenic 45.0%
ATCTTTGCAACAACTGGTCC+GGG - chr2_3:8615380-8615399 Msa0276350:CDS 45.0%
!! GGTAAGTTAACTTGGTGCTC+TGG - chr2_3:8615455-8615474 Msa0276350:CDS 45.0%
TTAGAACAGTCGACGCAGAT+TGG - chr2_3:8615594-8615613 Msa0276350:intron 45.0%
GGAATCAGAACCAATCAGCA+GGG + chr2_3:8615921-8615940 None:intergenic 45.0%
TGGAATCAGAACCAATCAGC+AGG + chr2_3:8615922-8615941 None:intergenic 45.0%
!! TGTGATCGAACCGACTTGTT+TGG - chr2_3:8616325-8616344 Msa0276350:five_prime_UTR 45.0%
GAACCTCAGTCATCAGTTCT+AGG - chr2_3:8616495-8616514 Msa0276350:five_prime_UTR 45.0%
ATTAAGGCTCACCTTCATCC+TGG - chr2_3:8616549-8616568 Msa0276350:five_prime_UTR 45.0%
CTTCCTCTTAAGATCACCTC+TGG + chr2_3:8616585-8616604 None:intergenic 45.0%
CTTGATTCTGCTCCTGTTGA+TGG - chr2_3:8616990-8617009 Msa0276350:intron 45.0%
GCTAAGCTCATCCCAAAGTA+AGG + chr2_3:8617152-8617171 None:intergenic 45.0%
! GACAACCAATCCTTTTCTCC+AGG - chr2_3:8617354-8617373 Msa0276350:intron 45.0%
GAAGACCTGGAGAAAAGGAT+TGG + chr2_3:8617362-8617381 None:intergenic 45.0%
CGATGATGAGGACAATGACA+AGG - chr2_3:8617382-8617401 Msa0276350:intron 45.0%
AACACAGTGCCACACTTACA+TGG - chr2_3:8617407-8617426 Msa0276350:intron 45.0%
TCAGCTGATCCATGTAAGTG+TGG + chr2_3:8617419-8617438 None:intergenic 45.0%
GACTTGTCTTTACCTGCAAG+CGG - chr2_3:8617437-8617456 Msa0276350:five_prime_UTR 45.0%
CATCGACAAAAGCCTTGACA+GGG + chr2_3:8617466-8617485 None:intergenic 45.0%
TCATCGACAAAAGCCTTGAC+AGG + chr2_3:8617467-8617486 None:intergenic 45.0%
GTCACTGTCATCTTCCTCTT+CGG + chr2_3:8617495-8617514 None:intergenic 45.0%
AAGACCAACTCCATCAGCAA+TGG - chr2_3:8617626-8617645 Msa0276350:five_prime_UTR 45.0%
TTGAGCAGCAGGATACAACT+GGG - chr2_3:8617650-8617669 Msa0276350:five_prime_UTR 45.0%
TGAAGTTGAAGAGGAAGACG+AGG - chr2_3:8617729-8617748 Msa0276350:intron 45.0%
GATGATCCCGCAGATGTTTA+CGG - chr2_3:8617846-8617865 Msa0276350:five_prime_UTR 45.0%
!!! GCTGTCACTTTGATTTTGGC+AGG - chr2_3:8617984-8618003 Msa0276350:intron 45.0%
!! CTGCTGCTTTCATCTTCAGT+CGG + chr2_3:8618131-8618150 None:intergenic 45.0%
GACTGAAGATGAAAGCAGCA+GGG - chr2_3:8618130-8618149 Msa0276350:intron 45.0%
ACTGAAGATGAAAGCAGCAG+GGG - chr2_3:8618131-8618150 Msa0276350:intron 45.0%
!! GGATAAAGGAGCACTTCATC+AGG + chr2_3:8618425-8618444 None:intergenic 45.0%
!! ACCTTCAGTGTTGATGTCAG+AGG - chr2_3:8618712-8618731 Msa0276350:intron 45.0%
TCCTCTGACATCAACACTGA+AGG + chr2_3:8618716-8618735 None:intergenic 45.0%
TCTACTGTCATACTCACTCC+TGG - chr2_3:8619037-8619056 Msa0276350:five_prime_UTR 45.0%
TCACTCCTGGTTTCTCTGTT+CGG - chr2_3:8619050-8619069 Msa0276350:five_prime_UTR 45.0%
TACAACCGAACAGAGAAACC+AGG + chr2_3:8619058-8619077 None:intergenic 45.0%
!! AATCGGTTTTTGGACCTCCA+TGG - chr2_3:8619351-8619370 Msa0276350:intron 45.0%
!! ATCGGTTTTTGGACCTCCAT+GGG - chr2_3:8619352-8619371 Msa0276350:intron 45.0%
!! ATCGGTTTTTGGACCTCCAT+GGG - chr2_3:8619352-8619371 Msa0276350:intron 45.0%
!! ATATGAAAAATATTAATAAT+TGG + chr2_3:8615942-8615961 None:intergenic 5.0%
AAGGGAGAGAGAAACGGGAA+CGG - chr2_3:8613271-8613290 Msa0276350:three_prime_UTR 50.0%
AAACGGGAACGGGAGAAGAA+AGG - chr2_3:8613282-8613301 Msa0276350:three_prime_UTR 50.0%
AACGGGAACGGGAGAAGAAA+GGG - chr2_3:8613283-8613302 Msa0276350:three_prime_UTR 50.0%
GGAGAAGAAAGGGAAAACGG+CGG - chr2_3:8613293-8613312 Msa0276350:three_prime_UTR 50.0%
GGGAAAACGGCGGTGAAAAA+CGG - chr2_3:8613303-8613322 Msa0276350:three_prime_UTR 50.0%
GGAAAACGGCGGTGAAAAAC+GGG - chr2_3:8613304-8613323 Msa0276350:three_prime_UTR 50.0%
GGTGAGGAAGAGTAGGAGAA+AGG - chr2_3:8613394-8613413 Msa0276350:three_prime_UTR 50.0%
GTAGGAGAAAGGGAAAGCGA+TGG - chr2_3:8613405-8613424 Msa0276350:three_prime_UTR 50.0%
AGGAGAAAGGGAAAGCGATG+GGG - chr2_3:8613407-8613426 Msa0276350:three_prime_UTR 50.0%
AGGAAACGGTGAAGAGCAAG+GGG - chr2_3:8613475-8613494 Msa0276350:three_prime_UTR 50.0%
! GGGTCGCGTTTTCTCATCAA+AGG - chr2_3:8613495-8613514 Msa0276350:three_prime_UTR 50.0%
GAAACAGTATGTGGCTGCAG+TGG - chr2_3:8613750-8613769 Msa0276350:three_prime_UTR 50.0%
! GGCAACAGAGTTTTCTGCAG+GGG - chr2_3:8613831-8613850 Msa0276350:intron 50.0%
GCAGCAGTTGGGATACCTAT+AGG - chr2_3:8614563-8614582 Msa0276350:intron 50.0%
CGAACACGGTCAAGAATTGC+TGG + chr2_3:8614654-8614673 None:intergenic 50.0%
ATTCTTGACCGTGTTCGCGA+TGG - chr2_3:8614657-8614676 Msa0276350:intron 50.0%
TCAACACTCCATCGCGAACA+CGG + chr2_3:8614668-8614687 None:intergenic 50.0%
TGAAACATCCGGTGGTTGAG+AGG - chr2_3:8615422-8615441 Msa0276350:CDS 50.0%
ATCCGGTGGTTGAGAGGTTT+AGG - chr2_3:8615428-8615447 Msa0276350:CDS 50.0%
TCCGGTGGTTGAGAGGTTTA+GGG - chr2_3:8615429-8615448 Msa0276350:CDS 50.0%
! TGGTTGAGAGGTTTAGGGCT+AGG - chr2_3:8615434-8615453 Msa0276350:CDS 50.0%
TCACCTTCATCCTGGTGGAA+TGG - chr2_3:8616557-8616576 Msa0276350:five_prime_UTR 50.0%
GAGCCAGAGGTGATCTTAAG+AGG - chr2_3:8616579-8616598 Msa0276350:intron 50.0%
!! AGCTCCTGTTGATGATACCC+AGG - chr2_3:8616770-8616789 Msa0276350:intron 50.0%
CATCGGAAGACCTGGAGAAA+AGG + chr2_3:8617367-8617386 None:intergenic 50.0%
TGTCGATGAAGAAGCCGAAG+AGG - chr2_3:8617478-8617497 Msa0276350:five_prime_UTR 50.0%
CAAGCCATTGCTGATGGAGT+TGG + chr2_3:8617633-8617652 None:intergenic 50.0%
CTTGAGCAGCAGGATACAAC+TGG - chr2_3:8617649-8617668 Msa0276350:five_prime_UTR 50.0%
CTGATGAGGAAACTGAGGAG+TGG - chr2_3:8617893-8617912 Msa0276350:intron 50.0%
CGACTGAAGATGAAAGCAGC+AGG - chr2_3:8618129-8618148 Msa0276350:intron 50.0%
TTTGGACCTCCATGGGACAT+CGG - chr2_3:8619359-8619378 Msa0276350:intron 50.0%
CAAAAACCGATGTCCCATGG+AGG + chr2_3:8619368-8619387 None:intergenic 50.0%
!!! CTCCATGGGACATCGGTTTT+TGG - chr2_3:8619366-8619385 Msa0276350:five_prime_UTR 50.0%
GTCCAAAAACCGATGTCCCA+TGG + chr2_3:8619371-8619390 None:intergenic 50.0%
!!! CATCGGTTTTTGGACCTCCA+TGG - chr2_3:8619376-8619395 Msa0276350:five_prime_UTR 50.0%
AGGGAGAGAGAAACGGGAAC+GGG - chr2_3:8613272-8613291 Msa0276350:three_prime_UTR 55.0%
ACGGCGGTGAAAAACGGGAA+AGG - chr2_3:8613309-8613328 Msa0276350:three_prime_UTR 55.0%
CGGCGGTGAAAAACGGGAAA+GGG - chr2_3:8613310-8613329 Msa0276350:three_prime_UTR 55.0%
CGGTGAAAAACGGGAAAGGG+AGG - chr2_3:8613313-8613332 Msa0276350:three_prime_UTR 55.0%
GGAGAAAGGGAAAGCGATGG+GGG - chr2_3:8613408-8613427 Msa0276350:three_prime_UTR 55.0%
!! GTGTTCGCGATGGAGTGTTG+AGG - chr2_3:8614667-8614686 Msa0276350:CDS 55.0%
CATGCCCAGTGCAAGATTGC+AGG - chr2_3:8615255-8615274 Msa0276350:intron 55.0%
GCCCTAAACCTCTCAACCAC+CGG + chr2_3:8615433-8615452 None:intergenic 55.0%
AAGGCTCACCTTCATCCTGG+TGG - chr2_3:8616552-8616571 Msa0276350:five_prime_UTR 55.0%
GCTCCATTCCACCAGGATGA+AGG + chr2_3:8616563-8616582 None:intergenic 55.0%
CTCCAGGTCTTCCGATGATG+AGG - chr2_3:8617370-8617389 Msa0276350:intron 55.0%
GTCCTCATCATCGGAAGACC+TGG + chr2_3:8617375-8617394 None:intergenic 55.0%
GCTGCTCAAGCCATTGCTGA+TGG + chr2_3:8617639-8617658 None:intergenic 55.0%
TCAGCAATGGCTTGAGCAGC+AGG - chr2_3:8617639-8617658 Msa0276350:five_prime_UTR 55.0%
GCAGCAGGATACAACTGGGA+TGG - chr2_3:8617654-8617673 Msa0276350:five_prime_UTR 55.0%
GAAAGGGAAAGCGATGGGGG+AGG - chr2_3:8613411-8613430 Msa0276350:three_prime_UTR 60.0%
CAGTATGTGGCTGCAGTGGG+AGG - chr2_3:8613754-8613773 Msa0276350:three_prime_UTR 60.0%
TCCTGGTGGAATGGAGCCAG+AGG - chr2_3:8616566-8616585 Msa0276350:five_prime_UTR 60.0%
! ACCTCTGGCTCCATTCCACC+AGG + chr2_3:8616570-8616589 None:intergenic 60.0%
TTGACAGGGTCACCGCTTGC+AGG + chr2_3:8617452-8617471 None:intergenic 60.0%
TGCAAGCGGTGACCCTGTCA+AGG - chr2_3:8617451-8617470 Msa0276350:five_prime_UTR 60.0%
ACGGTGAAAAACGGCGGCGC+CGG - chr2_3:8613373-8613392 Msa0276350:three_prime_UTR 65.0%
GGGAAAGCGATGGGGGAGGT+TGG - chr2_3:8613415-8613434 Msa0276350:three_prime_UTR 65.0%
!! GAAAAACGGCGGCGCCGGTG+AGG - chr2_3:8613378-8613397 Msa0276350:three_prime_UTR 70.0%
!! CGGCGCCGGTGAGGAAGAGT+AGG - chr2_3:8613387-8613406 Msa0276350:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 8613263 8619615 8613263 ID=Msa0276350;Name=Msa0276350
chr2_3 mRNA 8613263 8619615 8613263 ID=Msa0276350-mRNA-1;Parent=Msa0276350;Name=Msa0276350-mRNA-1;_AED=0.12;_eAED=0.12;_QI=1876|0.94|0.89|1|0.44|0.36|19|854|248
chr2_3 exon 8613263 8613794 8613263 ID=Msa0276350-mRNA-1:exon:3931;Parent=Msa0276350-mRNA-1
chr2_3 exon 8614130 8614543 8614130 ID=Msa0276350-mRNA-1:exon:3930;Parent=Msa0276350-mRNA-1
chr2_3 exon 8614660 8614774 8614660 ID=Msa0276350-mRNA-1:exon:3929;Parent=Msa0276350-mRNA-1
chr2_3 exon 8614933 8615249 8614933 ID=Msa0276350-mRNA-1:exon:3928;Parent=Msa0276350-mRNA-1
chr2_3 exon 8615330 8615502 8615330 ID=Msa0276350-mRNA-1:exon:3927;Parent=Msa0276350-mRNA-1
chr2_3 exon 8615860 8616002 8615860 ID=Msa0276350-mRNA-1:exon:3926;Parent=Msa0276350-mRNA-1
chr2_3 exon 8616087 8616140 8616087 ID=Msa0276350-mRNA-1:exon:3925;Parent=Msa0276350-mRNA-1
chr2_3 exon 8616218 8616589 8616218 ID=Msa0276350-mRNA-1:exon:3924;Parent=Msa0276350-mRNA-1
chr2_3 exon 8616674 8616730 8616674 ID=Msa0276350-mRNA-1:exon:3923;Parent=Msa0276350-mRNA-1
chr2_3 exon 8617052 8617132 8617052 ID=Msa0276350-mRNA-1:exon:3922;Parent=Msa0276350-mRNA-1
chr2_3 exon 8617423 8617513 8617423 ID=Msa0276350-mRNA-1:exon:3921;Parent=Msa0276350-mRNA-1
chr2_3 exon 8617602 8617727 8617602 ID=Msa0276350-mRNA-1:exon:3920;Parent=Msa0276350-mRNA-1
chr2_3 exon 8617812 8617902 8617812 ID=Msa0276350-mRNA-1:exon:3919;Parent=Msa0276350-mRNA-1
chr2_3 exon 8617992 8618040 8617992 ID=Msa0276350-mRNA-1:exon:3918;Parent=Msa0276350-mRNA-1
chr2_3 exon 8618149 8618324 8618149 ID=Msa0276350-mRNA-1:exon:3917;Parent=Msa0276350-mRNA-1
chr2_3 exon 8618449 8618509 8618449 ID=Msa0276350-mRNA-1:exon:3916;Parent=Msa0276350-mRNA-1
chr2_3 exon 8618604 8618683 8618604 ID=Msa0276350-mRNA-1:exon:3915;Parent=Msa0276350-mRNA-1
chr2_3 exon 8618818 8619108 8618818 ID=Msa0276350-mRNA-1:exon:3914;Parent=Msa0276350-mRNA-1
chr2_3 exon 8619362 8619615 8619362 ID=Msa0276350-mRNA-1:exon:3913;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8619362 8619615 8619362 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8618818 8619108 8618818 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8618604 8618683 8618604 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8618449 8618509 8618449 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8618149 8618324 8618149 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8617992 8618040 8617992 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8617812 8617902 8617812 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8617602 8617727 8617602 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8617423 8617513 8617423 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8617052 8617132 8617052 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8616674 8616730 8616674 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8616218 8616589 8616218 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8616087 8616140 8616087 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 five_prime_UTR 8615910 8616002 8615910 ID=Msa0276350-mRNA-1:five_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 CDS 8615860 8615909 8615860 ID=Msa0276350-mRNA-1:cds;Parent=Msa0276350-mRNA-1
chr2_3 CDS 8615330 8615502 8615330 ID=Msa0276350-mRNA-1:cds;Parent=Msa0276350-mRNA-1
chr2_3 CDS 8614933 8615249 8614933 ID=Msa0276350-mRNA-1:cds;Parent=Msa0276350-mRNA-1
chr2_3 CDS 8614660 8614774 8614660 ID=Msa0276350-mRNA-1:cds;Parent=Msa0276350-mRNA-1
chr2_3 CDS 8614452 8614543 8614452 ID=Msa0276350-mRNA-1:cds;Parent=Msa0276350-mRNA-1
chr2_3 three_prime_UTR 8614130 8614451 8614130 ID=Msa0276350-mRNA-1:three_prime_utr;Parent=Msa0276350-mRNA-1
chr2_3 three_prime_UTR 8613263 8613794 8613263 ID=Msa0276350-mRNA-1:three_prime_utr;Parent=Msa0276350-mRNA-1
Gene Sequence

>Msa0276350

ATGCTTTCAATGAACTTGAAACTTGATTCTGCTCCTGTTGATGGTGATGTGTCTTCCGATGATGAGGACAATGACAAGGAGAACACAGTGCCACACTTACATGGATCAGCTGACTTGTCTTTACCTGCAAGCGGTGACCCTGTCAAGGCTTTTGTCGATGAAGAAGCCGAAGAGGAAGATGACAGTGACAATGACCTACAACGCTTCCAAGATAATGAAGAAGACCAACTCCATCAGCAATGGCTTGAGCAGCAGGATACAACTGGGATGGATAATCTACTCCAGAAACTTAATTGCGGTTCAAGATTGAAAGAATCTGACGATGAAGTTGAAGAGGAAGACGAGGAAAGCAAAGAAACTGAAAATGAATCTGACGATGAAGTTGAAGACTTCACTGCTCCATCTGATGCTGTGAAGATCAATCTGAAGAAGGCGAAGCAGATGATCCCGCAGATGTTTACGGATAAAGATGATGCATATGTATCATCTGATGAGGAAACTGAGGAGTGGCTAGCCAAACAGTCCCTCTCTTATAGAGTTGAGAAGAACGCTCAATTCTTTTCACCGACTGAAGATGAAAGCAGCAGGGGAGTTTTCAATCTCATAAAGAAATTAAATGTTGTTCCTGATACCAAGATAAAAGGAAGAACTCCATCCATATTTGATATGCCACACATTGGCCAAAACATAACTAAATCATCAAAGATAGGTTACTTTGAGCTGCTAGAACATAGCTATTTTACCTGA
Protein sequence

>Msa0276350

MLSMNLKLDSAPVDGDVSSDDEDNDKENTVPHLHGSADLSLPASGDPVKAFVDEEAEEEDDSDNDLQRFQDNEEDQLHQQWLEQQDTTGMDNLLQKLNCGSRLKESDDEVEEEDEESKETENESDDEVEDFTAPSDAVKINLKKAKQMIPQMFTDKDDAYVSSDEETEEWLAKQSLSYRVEKNAQFFSPTEDESSRGVFNLIKKLNVVPDTKIKGRTPSIFDMPHIGQNITKSSKIGYFELLEHSYFT*