Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0041490 | sp|O23247|SYRM_ARATH | 67.333 | 600 | 178 | 5 | 9 | 608 | 61 | 642 | 0.0 | 834 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041490 | Msa0140600 | 0.801955 | 7.051256e-49 | -8.615850e-47 |
| Msa0041490 | Msa0278770 | 0.801042 | 1.084940e-48 | -8.615850e-47 |
| Msa0041490 | Msa0381520 | 0.814836 | 1.257762e-51 | -8.615850e-47 |
| Msa0041490 | Msa0520000 | 0.813713 | 2.227059e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0041490 | MtrunA17_Chr1g0206941 | 97.039 | 608 | 6 | 1 | 1 | 608 | 1 | 596 | 0.0 | 1215 |
| Msa0041490 | MtrunA17_Chr3g0140571 | 91.133 | 609 | 40 | 3 | 1 | 608 | 1 | 596 | 0.0 | 1142 |
| Msa0041490 | MtrunA17_Chr6g0487211 | 74.794 | 607 | 139 | 3 | 3 | 608 | 66 | 659 | 0.0 | 962 |
| Msa0041490 | MtrunA17_Chr4g0056881 | 71.717 | 495 | 67 | 4 | 1 | 462 | 1 | 455 | 0.0 | 714 |
| Msa0041490 | MtrunA17_Chr4g0056871 | 87.671 | 146 | 18 | 0 | 463 | 608 | 11 | 156 | 2.45e-85 | 263 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0041490 | AT4G26300.1 | 67.333 | 600 | 178 | 5 | 9 | 608 | 61 | 642 | 0.0 | 834 |
| Msa0041490 | AT4G26300.2 | 67.333 | 600 | 178 | 5 | 9 | 608 | 35 | 616 | 0.0 | 834 |
| Msa0041490 | AT4G26300.3 | 67.333 | 600 | 178 | 5 | 9 | 608 | 48 | 629 | 0.0 | 833 |
| Msa0041490 | AT4G26300.4 | 67.333 | 600 | 178 | 5 | 9 | 608 | 9 | 590 | 0.0 | 833 |
| Msa0041490 | AT4G26300.5 | 67.333 | 600 | 178 | 5 | 9 | 608 | 72 | 653 | 0.0 | 833 |
| Msa0041490 | AT1G66530.1 | 66.667 | 597 | 178 | 5 | 12 | 608 | 15 | 590 | 0.0 | 820 |
Find 170 sgRNAs with CRISPR-Local
Find 526 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCACAAAAGAGGGTATT+AGG | 0.131775 | 1_1:+71910992 | None:intergenic |
| TCAGATTCCTTAACATCTTC+TGG | 0.172381 | 1_1:+71907950 | None:intergenic |
| TTGGAGAAACTGGAGAAATT+AGG | 0.196989 | 1_1:-71906518 | Msa0041490:CDS |
| TCCAAAGTTGGAGGGATTAA+TGG | 0.219730 | 1_1:+71906536 | None:intergenic |
| CTTCATTAAACACTTCATTA+AGG | 0.220024 | 1_1:+71902938 | None:intergenic |
| TGGAACACAAGCATCAATTA+AGG | 0.234845 | 1_1:+71910681 | None:intergenic |
| TTTACCAGATTTCCTGATAA+TGG | 0.236837 | 1_1:+71904206 | None:intergenic |
| ACATCAGAGGCAATTGGATA+TGG | 0.260123 | 1_1:-71905345 | Msa0041490:CDS |
| TTTCCATGCCGTGCGATACT+TGG | 0.265683 | 1_1:+71907107 | None:intergenic |
| CCCTCCAACTTTGGAGAAAC+TGG | 0.266401 | 1_1:-71906528 | Msa0041490:CDS |
| GCAATTGGCCACGTTGTTTC+GGG | 0.279977 | 1_1:-71910746 | Msa0041490:CDS |
| TGCATTTCTTTGGCTATATT+CGG | 0.289640 | 1_1:+71909634 | None:intergenic |
| TGATCCTGATTTCAAGAAAA+AGG | 0.294382 | 1_1:-71907287 | Msa0041490:CDS |
| ATATGCACTCATATAGGTTT+TGG | 0.295018 | 1_1:-71905681 | Msa0041490:CDS |
| GGATATTCATTTGGATCCTT+TGG | 0.298860 | 1_1:+71905705 | None:intergenic |
| AGCAATTGGCCACGTTGTTT+CGG | 0.298871 | 1_1:-71910747 | Msa0041490:CDS |
| CTAGGATCTGTTCCATTATC+AGG | 0.309543 | 1_1:-71904218 | Msa0041490:CDS |
| TCCATTAATCCCTCCAACTT+TGG | 0.322437 | 1_1:-71906537 | Msa0041490:CDS |
| GTGACCAACATGCATTTCTT+TGG | 0.327900 | 1_1:+71909624 | None:intergenic |
| TCGTGCTCGGTTGCGGGTCC+TGG | 0.328846 | 1_1:-71909901 | Msa0041490:CDS |
| TTCATTAAACACTTCATTAA+GGG | 0.330358 | 1_1:+71902939 | None:intergenic |
| GTAGAATCGTGCTCGGTTGC+GGG | 0.353927 | 1_1:-71909907 | Msa0041490:CDS |
| TCCTTAACATCTTCTGGGTT+CGG | 0.355360 | 1_1:+71907956 | None:intergenic |
| CTTGTGACAGACTGGGAATT+TGG | 0.363232 | 1_1:-71903931 | Msa0041490:intron |
| ATTTACTTGATGAAGCTAAA+AGG | 0.368508 | 1_1:-71905593 | Msa0041490:CDS |
| TGGAGAAACTGGAGAAATTA+GGG | 0.368736 | 1_1:-71906517 | Msa0041490:CDS |
| GAACGAGGATTATTGAATTC+CGG | 0.368759 | 1_1:+71910070 | None:intergenic |
| CTTCACAAAAGAGGGTATTA+GGG | 0.370887 | 1_1:+71910993 | None:intergenic |
| GTGCATATTGGATATTCATT+TGG | 0.374710 | 1_1:+71905696 | None:intergenic |
| AATATATATGTTACAGATGT+TGG | 0.383174 | 1_1:-71905871 | Msa0041490:CDS |
| GCGGATCATAACTTGTAAAC+TGG | 0.386985 | 1_1:+71903291 | None:intergenic |
| TTCTCCAGTTTCTCCAAAGT+TGG | 0.388161 | 1_1:+71906524 | None:intergenic |
| GGTAGAATCGTGCTCGGTTG+CGG | 0.390789 | 1_1:-71909908 | Msa0041490:CDS |
| TTGTCAGGTTGTTGGGTCGC+TGG | 0.394815 | 1_1:-71903391 | Msa0041490:intron |
| TGGAATCCGTTTGGAGGAAA+TGG | 0.396505 | 1_1:-71907034 | Msa0041490:intron |
| CAGATTCCTTAACATCTTCT+GGG | 0.400048 | 1_1:+71907951 | None:intergenic |
| GGAACACAAGCATCAATTAA+GGG | 0.401497 | 1_1:+71910682 | None:intergenic |
| ACTTCCAATCAAGAGGGTTA+TGG | 0.403068 | 1_1:-71909671 | Msa0041490:CDS |
| AAACCTATATGAGTGCATAT+TGG | 0.403279 | 1_1:+71905684 | None:intergenic |
| TGTTCCATTATCAGGAAATC+TGG | 0.404568 | 1_1:-71904210 | Msa0041490:CDS |
| CCCAGTCACCGATATGATTT+CGG | 0.405102 | 1_1:+71909530 | None:intergenic |
| TTTCGGCGGATCAGACATTC+AGG | 0.411726 | 1_1:+71909547 | None:intergenic |
| CTTAATGAAGTGTTTAATGA+AGG | 0.420141 | 1_1:-71902937 | Msa0041490:three_prime_UTR |
| TATCCAATATGCACTCATAT+AGG | 0.421404 | 1_1:-71905687 | Msa0041490:CDS |
| TCCGAACCCAGAAGATGTTA+AGG | 0.424389 | 1_1:-71907957 | Msa0041490:CDS |
| CACCTGAGGTCAACAATTAT+CGG | 0.424572 | 1_1:-71909604 | Msa0041490:CDS |
| TAGATGCTCCTGCGAGTGTC+AGG | 0.425661 | 1_1:-71910771 | Msa0041490:CDS |
| AATGCCTTTGTCAGGTTGTT+GGG | 0.425861 | 1_1:-71903398 | Msa0041490:intron |
| TGAAACCTTCTTCACAAAAG+AGG | 0.427675 | 1_1:+71910984 | None:intergenic |
| AATGGTTAGTACTGAAAGTT+GGG | 0.429033 | 1_1:-71902999 | Msa0041490:three_prime_UTR |
| AACGAATTTGCGATATTAGT+AGG | 0.429558 | 1_1:-71907086 | Msa0041490:CDS |
| CAATGGTTAGTACTGAAAGT+TGG | 0.430007 | 1_1:-71903000 | Msa0041490:three_prime_UTR |
| TCAATTAAGGGAACAACATC+AGG | 0.430936 | 1_1:+71910694 | None:intergenic |
| GTTCAATCACTCTACCTCTT+CGG | 0.431214 | 1_1:-71903175 | Msa0041490:three_prime_UTR |
| TCAGCGCCTTGGAATCCGTT+TGG | 0.437898 | 1_1:-71907043 | Msa0041490:CDS |
| ACCTGAGGTCAACAATTATC+GGG | 0.439320 | 1_1:-71909603 | Msa0041490:CDS |
| TCAACCATAACCCTCTTGAT+TGG | 0.439386 | 1_1:+71909667 | None:intergenic |
| GAATGCCTTTGTCAGGTTGT+TGG | 0.439548 | 1_1:-71903399 | Msa0041490:intron |
| TTACCGATGGTATTGATTCA+TGG | 0.440119 | 1_1:-71909702 | Msa0041490:CDS |
| CCCTTACCATTTCCTCCAAA+CGG | 0.442984 | 1_1:+71907028 | None:intergenic |
| TCTACCTCTTCGGTTCTCTT+CGG | 0.444062 | 1_1:-71903165 | Msa0041490:three_prime_UTR |
| CACACAAACTGAAAATTTCA+AGG | 0.444098 | 1_1:+71903098 | None:intergenic |
| AAGCCACCCCGCACGCCTAA+AGG | 0.451097 | 1_1:+71905728 | None:intergenic |
| ATCTAGATAATGCTAAAGAT+TGG | 0.451886 | 1_1:-71905389 | Msa0041490:intron |
| TGAATGTCGAAAAGCTTGAT+TGG | 0.453450 | 1_1:-71905894 | Msa0041490:CDS |
| GATGTTAAGGAATCTGATAT+TGG | 0.455532 | 1_1:-71907944 | Msa0041490:CDS |
| ATCTGATATTGGAGATCTAC+AGG | 0.455603 | 1_1:-71907933 | Msa0041490:intron |
| CATCAGAGGCAATTGGATAT+GGG | 0.465414 | 1_1:-71905344 | Msa0041490:CDS |
| ATATATATGTTACAGATGTT+GGG | 0.467733 | 1_1:-71905870 | Msa0041490:CDS |
| GAGAAAACATCAGAGGCAAT+TGG | 0.470928 | 1_1:-71905351 | Msa0041490:CDS |
| TACTAACCATTGCAAACAGC+GGG | 0.477612 | 1_1:+71903011 | None:intergenic |
| TGCGAGTGTCAGGAAGCAAT+TGG | 0.482845 | 1_1:-71910761 | Msa0041490:CDS |
| TTCCATGCCGTGCGATACTT+GGG | 0.484384 | 1_1:+71907108 | None:intergenic |
| CCCCGATAATTGTTGACCTC+AGG | 0.486443 | 1_1:+71909602 | None:intergenic |
| TATCAGGCCTTTAGGCGTGC+GGG | 0.487968 | 1_1:-71905735 | Msa0041490:intron |
| TCCAGTTTCTCCAAAGTTGG+AGG | 0.488329 | 1_1:+71906527 | None:intergenic |
| AGGTATTCACATAACACGTT+TGG | 0.488794 | 1_1:+71903544 | None:intergenic |
| CATGAAGACGAGCGTACATT+GGG | 0.490201 | 1_1:-71903900 | Msa0041490:CDS |
| ATTTGTTGTATGCACATGCT+AGG | 0.493285 | 1_1:-71904236 | Msa0041490:CDS |
| CAACTGATCTAGCATCACTT+TGG | 0.494338 | 1_1:-71906397 | Msa0041490:intron |
| GCCGAAATCATATCGGTGAC+TGG | 0.496211 | 1_1:-71909531 | Msa0041490:CDS |
| CTGATCCGCCGAAATCATAT+CGG | 0.497619 | 1_1:-71909538 | Msa0041490:CDS |
| AACAAGGTCTATCAGCGCCT+TGG | 0.497835 | 1_1:-71907054 | Msa0041490:CDS |
| GGGAACAACATCAGGTTCAG+TGG | 0.503166 | 1_1:+71910702 | None:intergenic |
| TACCGATGGTATTGATTCAT+GGG | 0.505587 | 1_1:-71909701 | Msa0041490:CDS |
| AGATTTCAGACAAATTATAC+AGG | 0.506797 | 1_1:+71903524 | None:intergenic |
| CCTACACTTCTGTGCACTAA+AGG | 0.506816 | 1_1:+71903221 | None:intergenic |
| AAGCATCTGATCAAAGTTGA+AGG | 0.507230 | 1_1:+71904549 | None:intergenic |
| AATGGATTGAAGAAGCTCTC+TGG | 0.510485 | 1_1:+71906554 | None:intergenic |
| CCGAAATCATATCGGTGACT+GGG | 0.513250 | 1_1:-71909530 | Msa0041490:CDS |
| AAGACAATATTGACAAATCC+AGG | 0.513254 | 1_1:+71909883 | None:intergenic |
| TAAGATTAAAGGGAGGCAAC+CGG | 0.516804 | 1_1:-71910089 | Msa0041490:CDS |
| TTAAACATGCTGATTATCAA+TGG | 0.518948 | 1_1:-71910648 | Msa0041490:intron |
| CCAGTTTCTCCAAAGTTGGA+GGG | 0.527284 | 1_1:+71906528 | None:intergenic |
| CCTTTAGTGCACAGAAGTGT+AGG | 0.528507 | 1_1:-71903221 | Msa0041490:three_prime_UTR |
| CTAATTGCTGTGAAAAGAGA+TGG | 0.529201 | 1_1:-71906437 | Msa0041490:CDS |
| TTCAATAATCCTCGTTCAGT+CGG | 0.530105 | 1_1:-71910064 | Msa0041490:CDS |
| GCTCGTGTGATATTTGTTGA+GGG | 0.532483 | 1_1:-71906473 | Msa0041490:CDS |
| GCATGAAGACGAGCGTACAT+TGG | 0.535587 | 1_1:-71903901 | Msa0041490:CDS |
| GCGTGCGGGGTGGCTTCCAA+AGG | 0.540430 | 1_1:-71905721 | Msa0041490:CDS |
| CACGATTCTACCATCTCTGA+TGG | 0.543628 | 1_1:+71909919 | None:intergenic |
| GCGCCTTGGAATCCGTTTGG+AGG | 0.545677 | 1_1:-71907040 | Msa0041490:CDS |
| GCTGTCAGTAGTCGAGCTCC+AGG | 0.546111 | 1_1:-71907260 | Msa0041490:intron |
| CAGCAGCGAGACTGTTCGAT+TGG | 0.548830 | 1_1:-71905619 | Msa0041490:CDS |
| CACTCGGTGAGTTTACGAAC+CGG | 0.551729 | 1_1:+71908578 | None:intergenic |
| TATCGGTGACTGGGGTACTC+AGG | 0.552888 | 1_1:-71909521 | Msa0041490:intron |
| GAAACCTTCTTCACAAAAGA+GGG | 0.553600 | 1_1:+71910985 | None:intergenic |
| TGATGAACTTACAATGAGCA+TGG | 0.558057 | 1_1:+71910882 | None:intergenic |
| CTATCAGGCCTTTAGGCGTG+CGG | 0.564893 | 1_1:-71905736 | Msa0041490:intron |
| ACACAAACTGAAAATTTCAA+GGG | 0.566211 | 1_1:+71903099 | None:intergenic |
| TGCTCGTGTGATATTTGTTG+AGG | 0.567259 | 1_1:-71906474 | Msa0041490:CDS |
| ATCCCAAGTATCGCACGGCA+TGG | 0.567410 | 1_1:-71907110 | Msa0041490:CDS |
| AATTGCTTCCTGACACTCGC+AGG | 0.571008 | 1_1:+71910763 | None:intergenic |
| TCGTAAACTCACCGAGTGGT+CGG | 0.571082 | 1_1:-71908573 | Msa0041490:intron |
| TTTCCTCCAAACGGATTCCA+AGG | 0.574025 | 1_1:+71907037 | None:intergenic |
| GGCGGATCAGACATTCAGGC+TGG | 0.575607 | 1_1:+71909551 | None:intergenic |
| TTCCGGTCAAACCGACCACT+CGG | 0.576315 | 1_1:+71908562 | None:intergenic |
| GGTTCGGAAATTTCTCAAAG+AGG | 0.576696 | 1_1:+71907972 | None:intergenic |
| GGTGAGTTTACGAACCGGAC+CGG | 0.577924 | 1_1:+71908583 | None:intergenic |
| GGTCTTGTTTGTGGTGATGA+CGG | 0.578443 | 1_1:-71905660 | Msa0041490:CDS |
| TCAGGTTGTTGGGTCGCTGG+AGG | 0.580416 | 1_1:-71903388 | Msa0041490:intron |
| ATATTGTCTTATCAAAGAAG+TGG | 0.584478 | 1_1:-71909870 | Msa0041490:CDS |
| TGTATCCCCGCTGTTTGCAA+TGG | 0.585241 | 1_1:-71903017 | Msa0041490:three_prime_UTR |
| ATCAGGCCTTTAGGCGTGCG+GGG | 0.588588 | 1_1:-71905734 | Msa0041490:intron |
| ATCAAAGAAGTGGATATCAA+AGG | 0.589439 | 1_1:-71909860 | Msa0041490:intron |
| TTCTTTGGCTATATTCGGTG+AGG | 0.589957 | 1_1:+71909639 | None:intergenic |
| ATCAGAGGCAATTGGATATG+GGG | 0.594771 | 1_1:-71905343 | Msa0041490:CDS |
| AAATCTCCCTCCATCAGAGA+TGG | 0.596307 | 1_1:-71909929 | Msa0041490:CDS |
| GGAACAACATCAGGTTCAGT+GGG | 0.600044 | 1_1:+71910703 | None:intergenic |
| ACAGACTGGGAATTTGGTGT+TGG | 0.602007 | 1_1:-71903925 | Msa0041490:intron |
| AGGCCTTTAGGCGTGCGGGG+TGG | 0.602232 | 1_1:-71905731 | Msa0041490:CDS |
| AGATAATGCTAAAGATTGGA+CGG | 0.605541 | 1_1:-71905385 | Msa0041490:CDS |
| ATGTTACAGATGTTGGGCAA+TGG | 0.605623 | 1_1:-71905864 | Msa0041490:CDS |
| TGATCAGATGCTTAATGACA+AGG | 0.609952 | 1_1:-71904539 | Msa0041490:intron |
| TGCCCATGAATCAATACCAT+CGG | 0.610478 | 1_1:+71909699 | None:intergenic |
| TAAACTCCTCATTGAGATAG+CGG | 0.610749 | 1_1:+71903272 | None:intergenic |
| GATTCTACCATCTCTGATGG+AGG | 0.612675 | 1_1:+71909922 | None:intergenic |
| TCATTTACTGCAATTTACTG+AGG | 0.613017 | 1_1:-71903874 | Msa0041490:intron |
| TGTAAACTGGATCAATTCCA+AGG | 0.613591 | 1_1:+71903304 | None:intergenic |
| CGGGGATACAGCAAGACTGT+TGG | 0.622645 | 1_1:+71903030 | None:intergenic |
| ACCCTCTTGATTGGAAGTCG+AGG | 0.627107 | 1_1:+71909676 | None:intergenic |
| CACCTCGACTTCCAATCAAG+AGG | 0.630058 | 1_1:-71909678 | Msa0041490:CDS |
| ATTGCTGTGAAAAGAGATGG+AGG | 0.640685 | 1_1:-71906434 | Msa0041490:CDS |
| AGAGATTGAGAAAACATCAG+AGG | 0.641877 | 1_1:-71905358 | Msa0041490:CDS |
| AAATGCATGTTGGTCACCTG+AGG | 0.645066 | 1_1:-71909618 | Msa0041490:CDS |
| ATTCTACCATCTCTGATGGA+GGG | 0.645169 | 1_1:+71909923 | None:intergenic |
| AGAGATGGTAGAATCGTGCT+CGG | 0.646037 | 1_1:-71909914 | Msa0041490:CDS |
| ACCTCGACTTCCAATCAAGA+GGG | 0.646268 | 1_1:-71909677 | Msa0041490:CDS |
| GGGATAAGTGATAAGTGTAG+AGG | 0.649114 | 1_1:+71910953 | None:intergenic |
| AAAGTTGCTCTTCTTGAACG+TGG | 0.655376 | 1_1:-71905564 | Msa0041490:intron |
| ATAGCCAAAGAAATGCATGT+TGG | 0.656561 | 1_1:-71909628 | Msa0041490:CDS |
| TTATCGGGGACACACTAGCA+CGG | 0.659549 | 1_1:-71909588 | Msa0041490:CDS |
| GGAGGATCCCAAGTATCGCA+CGG | 0.661368 | 1_1:-71907115 | Msa0041490:CDS |
| TAGTAGGACTGAATTTAACA+AGG | 0.663790 | 1_1:-71907070 | Msa0041490:CDS |
| TTACAGAAGATGCTTACCGA+TGG | 0.665354 | 1_1:-71909715 | Msa0041490:CDS |
| CGAAATCATATCGGTGACTG+GGG | 0.673339 | 1_1:-71909529 | Msa0041490:CDS |
| TATACCTCTCCGACTGAACG+AGG | 0.675464 | 1_1:+71910055 | None:intergenic |
| TAATCCTCGTTCAGTCGGAG+AGG | 0.677962 | 1_1:-71910059 | Msa0041490:intron |
| TGCACCGAAGAGAACCGAAG+AGG | 0.685731 | 1_1:+71903161 | None:intergenic |
| TATGATCCGCTATCTCAATG+AGG | 0.688130 | 1_1:-71903278 | Msa0041490:exon |
| AAGCAACACTTATTGTGATG+AGG | 0.689891 | 1_1:-71903341 | Msa0041490:CDS |
| GGGCTGATTGAAGACAATGA+TGG | 0.695452 | 1_1:-71906497 | Msa0041490:CDS |
| GTACTAACCATTGCAAACAG+CGG | 0.700380 | 1_1:+71903010 | None:intergenic |
| TGCATACAACAAATAAACAG+CGG | 0.707344 | 1_1:+71904245 | None:intergenic |
| AGTCACCGATATGATTTCGG+CGG | 0.710948 | 1_1:+71909533 | None:intergenic |
| CCTGAGGTCAACAATTATCG+GGG | 0.712112 | 1_1:-71909602 | Msa0041490:CDS |
| CGGTTCGTAAACTCACCGAG+TGG | 0.718906 | 1_1:-71908577 | Msa0041490:CDS |
| TAATGCTAAAGATTGGACGG+AGG | 0.726813 | 1_1:-71905382 | Msa0041490:CDS |
| GAGAGCTTCCCGAAACAACG+TGG | 0.734240 | 1_1:+71910738 | None:intergenic |
| ACTAACCATTGCAAACAGCG+GGG | 0.762719 | 1_1:+71903012 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTATTTATTTATCATTTT+CGG | - | chr1_1:71903090-71903109 | Msa0041490:three_prime_UTR | 10.0% |
| !!! | TTTTTATTAATTATTGACTT+TGG | - | chr1_1:71903915-71903934 | Msa0041490:CDS | 10.0% |
| !! | TAATATAGTTTATGTTTAAA+CGG | - | chr1_1:71904475-71904494 | Msa0041490:intron | 10.0% |
| !!! | TTGATATATACTTTATTTTA+AGG | - | chr1_1:71908818-71908837 | Msa0041490:intron | 10.0% |
| !!! | TTCATCAATTTATTATTTCT+GGG | - | chr1_1:71903060-71903079 | Msa0041490:three_prime_UTR | 15.0% |
| !!! | TGTATTTATTTATCATTTTC+GGG | - | chr1_1:71903091-71903110 | Msa0041490:three_prime_UTR | 15.0% |
| !! | ATAAACTATATTAAAACACA+CGG | + | chr1_1:71904468-71904487 | None:intergenic | 15.0% |
| !!! | ATATTCATAGTTTTAAAACT+CGG | - | chr1_1:71904514-71904533 | Msa0041490:intron | 15.0% |
| !! | ATTAGTATTATGTTAATAAG+AGG | + | chr1_1:71904926-71904945 | None:intergenic | 15.0% |
| !! | AAGAAACATCTTATAAATTA+TGG | - | chr1_1:71905057-71905076 | Msa0041490:intron | 15.0% |
| !! | AGAAACATCTTATAAATTAT+GGG | - | chr1_1:71905058-71905077 | Msa0041490:intron | 15.0% |
| !! | TTACACAATTTCATTTAATT+TGG | + | chr1_1:71905742-71905761 | None:intergenic | 15.0% |
| !!! | TGTTTTTTCATATATTTTGT+CGG | - | chr1_1:71906063-71906082 | Msa0041490:intron | 15.0% |
| !!! | TTTTAATTAAAATGATGTCA+AGG | - | chr1_1:71906384-71906403 | Msa0041490:intron | 15.0% |
| !!! | TTTACTTATTCTGAAATTAT+TGG | - | chr1_1:71906564-71906583 | Msa0041490:intron | 15.0% |
| !! | AAAATGATATAAAATTTACC+TGG | + | chr1_1:71906687-71906706 | None:intergenic | 15.0% |
| !!! | TCTTTCTTTTCTTATAATTT+TGG | - | chr1_1:71906961-71906980 | Msa0041490:intron | 15.0% |
| !!! | CTTTCTTTTCTTATAATTTT+GGG | - | chr1_1:71906962-71906981 | Msa0041490:intron | 15.0% |
| !! | TTGATAGAATATGTTATATT+TGG | + | chr1_1:71907098-71907117 | None:intergenic | 15.0% |
| !!! | AGTTTTTACTTCTAATTTTT+TGG | - | chr1_1:71907554-71907573 | Msa0041490:intron | 15.0% |
| !! | ACAATTAGTAGTATTAATTA+AGG | - | chr1_1:71909060-71909079 | Msa0041490:intron | 15.0% |
| !! | ATGTATTTAGTAATTTGAAA+TGG | - | chr1_1:71909105-71909124 | Msa0041490:intron | 15.0% |
| !!! | AGATTTTTCTTTTATATTTC+AGG | - | chr1_1:71910330-71910349 | Msa0041490:intron | 15.0% |
| !! | GTTCATCAATTTATTATTTC+TGG | - | chr1_1:71903059-71903078 | Msa0041490:three_prime_UTR | 20.0% |
| !! | AATGTAAAGTGATTTATGTT+TGG | + | chr1_1:71903621-71903640 | None:intergenic | 20.0% |
| !!! | TGATTACGTAAAATTGATTT+TGG | + | chr1_1:71903658-71903677 | None:intergenic | 20.0% |
| !! | CAGATTAAATCAGATTTAAT+CGG | - | chr1_1:71904687-71904706 | Msa0041490:intron | 20.0% |
| !! | AAATACAATATACTATGTGA+TGG | - | chr1_1:71904949-71904968 | Msa0041490:intron | 20.0% |
| !!! | TTTCATTTAATTTGGATGAA+TGG | + | chr1_1:71905734-71905753 | None:intergenic | 20.0% |
| !!! | GTAAGTAAACATTGTTATTT+TGG | + | chr1_1:71905820-71905839 | None:intergenic | 20.0% |
| !! | AAAATAATTCCTAGATATCT+AGG | + | chr1_1:71906176-71906195 | None:intergenic | 20.0% |
| !! | TACAAAACCAAACATATATA+AGG | + | chr1_1:71907009-71907028 | None:intergenic | 20.0% |
| !! | TGTATCATTAATTATCAACA+AGG | - | chr1_1:71907757-71907776 | Msa0041490:intron | 20.0% |
| !!! | ACCAAATTTTCAACAAAAAA+CGG | + | chr1_1:71907890-71907909 | None:intergenic | 20.0% |
| !! | AATATATATGTTACAGATGT+TGG | - | chr1_1:71908055-71908074 | Msa0041490:intron | 20.0% |
| !! | ATATATATGTTACAGATGTT+GGG | - | chr1_1:71908056-71908075 | Msa0041490:intron | 20.0% |
| !! | TAAAAATTGCAATAGGAAAA+TGG | + | chr1_1:71908395-71908414 | None:intergenic | 20.0% |
| !! | GAAGAAATAAAAATTGCAAT+AGG | + | chr1_1:71908402-71908421 | None:intergenic | 20.0% |
| !! | AAACTTCATTTATTTGATTC+TGG | + | chr1_1:71908436-71908455 | None:intergenic | 20.0% |
| !! | GGTTATTATTATCCTTTAAT+GGG | + | chr1_1:71908643-71908662 | None:intergenic | 20.0% |
| !! | TGGTTATTATTATCCTTTAA+TGG | + | chr1_1:71908644-71908663 | None:intergenic | 20.0% |
| !!! | CATAATTTATTGAGTTGAAT+TGG | - | chr1_1:71908706-71908725 | Msa0041490:intron | 20.0% |
| !!! | GAAATTTTAATCAGTATATC+TGG | + | chr1_1:71908734-71908753 | None:intergenic | 20.0% |
| !! | TATCTAATTAAACTAATTGC+CGG | + | chr1_1:71908892-71908911 | None:intergenic | 20.0% |
| !!! | TTTTTTAATCCATGTGAAAT+TGG | + | chr1_1:71908944-71908963 | None:intergenic | 20.0% |
| !!! | TCACATGGATTAAAAAAAAT+AGG | - | chr1_1:71908947-71908966 | Msa0041490:intron | 20.0% |
| !! | TGAAATGGAGATTATATTTA+AGG | - | chr1_1:71909120-71909139 | Msa0041490:intron | 20.0% |
| !!! | ATACTTTTTTCTTTCAAAGA+AGG | - | chr1_1:71909143-71909162 | Msa0041490:intron | 20.0% |
| !!! | TTCATAAATATTTTCTGAGA+GGG | + | chr1_1:71909503-71909522 | None:intergenic | 20.0% |
| !!! | TTTCATAAATATTTTCTGAG+AGG | + | chr1_1:71909504-71909523 | None:intergenic | 20.0% |
| !! | ATTTATGACATTACATTAGT+TGG | + | chr1_1:71909623-71909642 | None:intergenic | 20.0% |
| !! | TAACTATAATATCATCATCA+TGG | + | chr1_1:71909783-71909802 | None:intergenic | 20.0% |
| !!! | TTTTATATTTCAGGTTTTTG+TGG | - | chr1_1:71910339-71910358 | Msa0041490:intron | 20.0% |
| !!! | GTAGGAAATTTTTTTAACAA+TGG | + | chr1_1:71910461-71910480 | None:intergenic | 20.0% |
| !! | TTCATTAAACACTTCATTAA+GGG | + | chr1_1:71910990-71911009 | None:intergenic | 20.0% |
| !!! | ATTTTCGGGTAATGAAATAA+CGG | - | chr1_1:71903105-71903124 | Msa0041490:three_prime_UTR | 25.0% |
| !! | TTAAACATGCTGATTATCAA+TGG | - | chr1_1:71903278-71903297 | Msa0041490:exon | 25.0% |
| ! | ATGATAGCTTATAGCTTATA+TGG | - | chr1_1:71903337-71903356 | Msa0041490:CDS | 25.0% |
| ! | TGATAGCTTATAGCTTATAT+GGG | - | chr1_1:71903338-71903357 | Msa0041490:CDS | 25.0% |
| ! | CAAACATATGCTTAATTAAG+TGG | + | chr1_1:71903403-71903422 | None:intergenic | 25.0% |
| !!! | TGTTTGCTTGTTTTCAATTT+TGG | - | chr1_1:71903417-71903436 | Msa0041490:intron | 25.0% |
| !!! | AGTTGTAGAGTTATTTTATC+AGG | - | chr1_1:71903461-71903480 | Msa0041490:intron | 25.0% |
| !!! | TAGAGTTATTTTATCAGGTT+TGG | - | chr1_1:71903466-71903485 | Msa0041490:intron | 25.0% |
| ! | CAAATAGAATCAATTCTACA+AGG | + | chr1_1:71903516-71903535 | None:intergenic | 25.0% |
| !! | AGTCTTTTTGCTAAGATTAA+AGG | - | chr1_1:71903826-71903845 | Msa0041490:intron | 25.0% |
| !! | GTCTTTTTGCTAAGATTAAA+GGG | - | chr1_1:71903827-71903846 | Msa0041490:intron | 25.0% |
| ! | ATATTGTCTTATCAAAGAAG+TGG | - | chr1_1:71904056-71904075 | Msa0041490:intron | 25.0% |
| ! | TATAGTTTATGTTTAAACGG+AGG | - | chr1_1:71904478-71904497 | Msa0041490:intron | 25.0% |
| ! | CTGATTTAATCTGGTTAAAT+AGG | + | chr1_1:71904680-71904699 | None:intergenic | 25.0% |
| ! | CGATTAAATCTGATTTAATC+TGG | + | chr1_1:71904689-71904708 | None:intergenic | 25.0% |
| !!! | TGTTAGTTCTACAACTATTA+GGG | + | chr1_1:71905124-71905143 | None:intergenic | 25.0% |
| !!! | TTGTTAGTTCTACAACTATT+AGG | + | chr1_1:71905125-71905144 | None:intergenic | 25.0% |
| !!! | TTTGTTTTGTCAAAATGCTT+TGG | - | chr1_1:71905175-71905194 | Msa0041490:intron | 25.0% |
| !! | ATAATCATAGTTTTCAAACC+CGG | + | chr1_1:71905505-71905524 | None:intergenic | 25.0% |
| ! | AAAATTATAGCTCAAAGACA+AGG | + | chr1_1:71905588-71905607 | None:intergenic | 25.0% |
| !!! | AGTAAACATTGTTATTTTGG+TGG | + | chr1_1:71905817-71905836 | None:intergenic | 25.0% |
| ! | TTATAGAACATTCTGTTATG+AGG | - | chr1_1:71905856-71905875 | Msa0041490:CDS | 25.0% |
| !!! | GTTCAGATCTGATATTTTTT+TGG | - | chr1_1:71906094-71906113 | Msa0041490:intron | 25.0% |
| !! | TATTATCTATTTAGGTTCTG+TGG | + | chr1_1:71906209-71906228 | None:intergenic | 25.0% |
| ! | GCCTTAAAAAGATAACTAAT+CGG | - | chr1_1:71906261-71906280 | Msa0041490:intron | 25.0% |
| !!! | ACCGATTAGTTATCTTTTTA+AGG | + | chr1_1:71906265-71906284 | None:intergenic | 25.0% |
| !!! | TATTCTGAAATTATTGGAGT+TGG | - | chr1_1:71906570-71906589 | Msa0041490:intron | 25.0% |
| !! | ACTATCAAACTTCAATTTTG+AGG | + | chr1_1:71906620-71906639 | None:intergenic | 25.0% |
| ! | TAGCTCATATATAATCTTGT+TGG | - | chr1_1:71907202-71907221 | Msa0041490:intron | 25.0% |
| !! | TAATAAGAAGTGTATGAGAT+AGG | - | chr1_1:71907672-71907691 | Msa0041490:intron | 25.0% |
| ! | CAAATTTAAACGTTCCAAAT+TGG | - | chr1_1:71907783-71907802 | Msa0041490:intron | 25.0% |
| ! | AATAGTTTATAGATCTACTG+TGG | - | chr1_1:71907955-71907974 | Msa0041490:CDS | 25.0% |
| !!! | ACATTTTGACATGCTTTTTA+AGG | - | chr1_1:71908087-71908106 | Msa0041490:intron | 25.0% |
| ! | TGACAATATCTTAGTCAATT+TGG | + | chr1_1:71908118-71908137 | None:intergenic | 25.0% |
| ! | ATTTACTTGATGAAGCTAAA+AGG | - | chr1_1:71908333-71908352 | Msa0041490:intron | 25.0% |
| ! | ATAAATGAAGTTTCTGTTTG+TGG | - | chr1_1:71908443-71908462 | Msa0041490:intron | 25.0% |
| ! | ATCTAGATAATGCTAAAGAT+TGG | - | chr1_1:71908537-71908556 | Msa0041490:intron | 25.0% |
| !!! | ACTTTTAAAATTCAGTAAGC+AGG | + | chr1_1:71908756-71908775 | None:intergenic | 25.0% |
| !! | AGTTAACAAGATTTTCTAAC+CGG | - | chr1_1:71908870-71908889 | Msa0041490:intron | 25.0% |
| !! | CAATGTGTCTATTTTGTATA+TGG | - | chr1_1:71908976-71908995 | Msa0041490:intron | 25.0% |
| ! | TTCAAAGAAGGCTTATATTT+AGG | - | chr1_1:71909155-71909174 | Msa0041490:intron | 25.0% |
| ! | TCAAAGAAGGCTTATATTTA+GGG | - | chr1_1:71909156-71909175 | Msa0041490:intron | 25.0% |
| !!! | TCATAAATATTTTCTGAGAG+GGG | + | chr1_1:71909502-71909521 | None:intergenic | 25.0% |
| ! | TTAACAAATGTTGATCTTGA+AGG | - | chr1_1:71909588-71909607 | Msa0041490:CDS | 25.0% |
| !! | ATTACATTAGTTGGTTTCAT+GGG | + | chr1_1:71909614-71909633 | None:intergenic | 25.0% |
| ! | AGACATAGAAGAACTAAAAA+AGG | - | chr1_1:71909742-71909761 | Msa0041490:intron | 25.0% |
| ! | TATATACATGTATTATGCCT+AGG | - | chr1_1:71909844-71909863 | Msa0041490:intron | 25.0% |
| ! | AGATTTCAGACAAATTATAC+AGG | + | chr1_1:71910405-71910424 | None:intergenic | 25.0% |
| !!! | TTTTTTTAACAATGGATACC+TGG | + | chr1_1:71910453-71910472 | None:intergenic | 25.0% |
| ! | TACACATCAAATAGGAATAT+GGG | + | chr1_1:71910500-71910519 | None:intergenic | 25.0% |
| ! | ATACACATCAAATAGGAATA+TGG | + | chr1_1:71910501-71910520 | None:intergenic | 25.0% |
| ! | CACATTAATACACATCAAAT+AGG | + | chr1_1:71910508-71910527 | None:intergenic | 25.0% |
| !! | TGACACTAATTTTATTGACA+AGG | - | chr1_1:71910804-71910823 | Msa0041490:intron | 25.0% |
| ! | ACACAAACTGAAAATTTCAA+GGG | + | chr1_1:71910830-71910849 | None:intergenic | 25.0% |
| ! | CTTCATTAAACACTTCATTA+AGG | + | chr1_1:71910991-71911010 | None:intergenic | 25.0% |
| !! | CTTAATGAAGTGTTTAATGA+AGG | - | chr1_1:71910989-71911008 | Msa0041490:five_prime_UTR | 25.0% |
| GATGTTCGTTGTTTATATGT+AGG | - | chr1_1:71903129-71903148 | Msa0041490:three_prime_UTR | 30.0% | |
| !! | TTGCTTGTTTTCAATTTTGG+AGG | - | chr1_1:71903420-71903439 | Msa0041490:intron | 30.0% |
| !! | TGCTTGTTTTCAATTTTGGA+GGG | - | chr1_1:71903421-71903440 | Msa0041490:intron | 30.0% |
| ATCAGGTTTGGATGATTTAA+AGG | - | chr1_1:71903478-71903497 | Msa0041490:intron | 30.0% | |
| TGGATGTATTTATGTCAAAG+TGG | + | chr1_1:71903601-71903620 | None:intergenic | 30.0% | |
| TAAACAGCTTAGTGTATGTA+TGG | + | chr1_1:71903714-71903733 | None:intergenic | 30.0% | |
| !!! | GTTTTAGTTGCACTATACAT+TGG | - | chr1_1:71903752-71903771 | Msa0041490:intron | 30.0% |
| ! | TTTTTGCTAAGATTAAAGGG+AGG | - | chr1_1:71903830-71903849 | Msa0041490:intron | 30.0% |
| AAGACAATATTGACAAATCC+AGG | + | chr1_1:71904046-71904065 | None:intergenic | 30.0% | |
| ATCAAAGAAGTGGATATCAA+AGG | - | chr1_1:71904066-71904085 | Msa0041490:intron | 30.0% | |
| CATAATCCAAACAACACATA+GGG | + | chr1_1:71904159-71904178 | None:intergenic | 30.0% | |
| TGCATTTCTTTGGCTATATT+CGG | + | chr1_1:71904295-71904314 | None:intergenic | 30.0% | |
| ! | TACAGCTATATTTTGTTGAC+AGG | - | chr1_1:71904767-71904786 | Msa0041490:intron | 30.0% |
| TAAATTATGGGCTTATTGAG+AGG | - | chr1_1:71905070-71905089 | Msa0041490:intron | 30.0% | |
| !! | ATTAACAGTTGGTGGTTAAT+GGG | + | chr1_1:71905096-71905115 | None:intergenic | 30.0% |
| !! | TATTAACAGTTGGTGGTTAA+TGG | + | chr1_1:71905097-71905116 | None:intergenic | 30.0% |
| TTAGGGTTTGTATTAACAGT+TGG | + | chr1_1:71905107-71905126 | None:intergenic | 30.0% | |
| CAAAACAAAAGAACTGAACT+TGG | + | chr1_1:71905164-71905183 | None:intergenic | 30.0% | |
| ATTCACAACCTTATGTCTTT+GGG | - | chr1_1:71905612-71905631 | Msa0041490:CDS | 30.0% | |
| !! | AACCATTTCTAGTTGTCTTT+GGG | - | chr1_1:71905650-71905669 | Msa0041490:CDS | 30.0% |
| ATAGCTGATGTAATGTAAGT+AGG | - | chr1_1:71905677-71905696 | Msa0041490:CDS | 30.0% | |
| TGAAATAGTTCGGTATCTAT+GGG | + | chr1_1:71905790-71905809 | None:intergenic | 30.0% | |
| TTGAAATAGTTCGGTATCTA+TGG | + | chr1_1:71905791-71905810 | None:intergenic | 30.0% | |
| GATGTTAAGGAATCTGATAT+TGG | - | chr1_1:71905982-71906001 | Msa0041490:intron | 30.0% | |
| ! | TCATACCAGTTTTCTTTTGT+AGG | - | chr1_1:71906040-71906059 | Msa0041490:intron | 30.0% |
| AAACACCTACAAAAGAAAAC+TGG | + | chr1_1:71906048-71906067 | None:intergenic | 30.0% | |
| CTATTCATTCCTAGATATCT+AGG | - | chr1_1:71906164-71906183 | Msa0041490:intron | 30.0% | |
| GCGGCTTATATTATCTATTT+AGG | + | chr1_1:71906217-71906236 | None:intergenic | 30.0% | |
| !! | AGATAACTAATCGGTTTTCT+TGG | - | chr1_1:71906270-71906289 | Msa0041490:intron | 30.0% |
| AGGTGTGAATTCAGAAATAA+AGG | - | chr1_1:71906404-71906423 | Msa0041490:CDS | 30.0% | |
| GAATTCAGAAATAAAGGTTC+AGG | - | chr1_1:71906410-71906429 | Msa0041490:CDS | 30.0% | |
| TAGTATCTATAGTCAAACAC+AGG | + | chr1_1:71906436-71906455 | None:intergenic | 30.0% | |
| !! | GCATTTTTAGGCATTCTATA+AGG | - | chr1_1:71906594-71906613 | Msa0041490:intron | 30.0% |
| TGATCCTGATTTCAAGAAAA+AGG | - | chr1_1:71906639-71906658 | Msa0041490:intron | 30.0% | |
| !!! | CTGAATTTTGATTTCAGAGT+GGG | - | chr1_1:71906789-71906808 | Msa0041490:intron | 30.0% |
| !!! | TGAATTTTGATTTCAGAGTG+GGG | - | chr1_1:71906790-71906809 | Msa0041490:intron | 30.0% |
| AACGAATTTGCGATATTAGT+AGG | - | chr1_1:71906840-71906859 | Msa0041490:intron | 30.0% | |
| TAGTAGGACTGAATTTAACA+AGG | - | chr1_1:71906856-71906875 | Msa0041490:intron | 30.0% | |
| ATCTGTGCCTTATATATGTT+TGG | - | chr1_1:71906999-71907018 | Msa0041490:intron | 30.0% | |
| ! | GTAGAAATTCTGTCTGTTTT+TGG | - | chr1_1:71907026-71907045 | Msa0041490:intron | 30.0% |
| TGGTTGCTTGATTTAACATT+AGG | - | chr1_1:71907164-71907183 | Msa0041490:intron | 30.0% | |
| ! | TATGTTTTACTGTTCACTGA+TGG | - | chr1_1:71907330-71907349 | Msa0041490:intron | 30.0% |
| ! | ATGTTTTACTGTTCACTGAT+GGG | - | chr1_1:71907331-71907350 | Msa0041490:intron | 30.0% |
| !!! | TTCCAAATTGGTTTTGTGAT+AGG | - | chr1_1:71907795-71907814 | Msa0041490:intron | 30.0% |
| ATCCTATCACAAAACCAATT+TGG | + | chr1_1:71907800-71907819 | None:intergenic | 30.0% | |
| !!! | GCCGTTTTTTGTTGAAAATT+TGG | - | chr1_1:71907886-71907905 | Msa0041490:intron | 30.0% |
| ! | TAAATGTCTAACTTCCCTTT+TGG | - | chr1_1:71908162-71908181 | Msa0041490:intron | 30.0% |
| GTGCATATTGGATATTCATT+TGG | + | chr1_1:71908233-71908252 | None:intergenic | 30.0% | |
| TATCCAATATGCACTCATAT+AGG | - | chr1_1:71908239-71908258 | Msa0041490:intron | 30.0% | |
| AAACCTATATGAGTGCATAT+TGG | + | chr1_1:71908245-71908264 | None:intergenic | 30.0% | |
| ! | ATATGCACTCATATAGGTTT+TGG | - | chr1_1:71908245-71908264 | Msa0041490:intron | 30.0% |
| TTTAGAAGGTTAACTGTCTA+AGG | + | chr1_1:71908507-71908526 | None:intergenic | 30.0% | |
| AGATGAACATAGGATTTAGA+AGG | + | chr1_1:71908521-71908540 | None:intergenic | 30.0% | |
| AGCATTATCTAGATGAACAT+AGG | + | chr1_1:71908531-71908550 | None:intergenic | 30.0% | |
| AGATAATGCTAAAGATTGGA+CGG | - | chr1_1:71908541-71908560 | Msa0041490:intron | 30.0% | |
| ! | ATTATTGCTAGAAAGCATGT+TGG | + | chr1_1:71908664-71908683 | None:intergenic | 30.0% |
| ATCCATGTGAAATTGGAAAA+AGG | + | chr1_1:71908937-71908956 | None:intergenic | 30.0% | |
| GAACACACTCATATACAAAA+GGG | + | chr1_1:71909016-71909035 | None:intergenic | 30.0% | |
| TGAACACACTCATATACAAA+AGG | + | chr1_1:71909017-71909036 | None:intergenic | 30.0% | |
| ! | GTTGCTTCTATAAATGGTTT+TGG | - | chr1_1:71909207-71909226 | Msa0041490:intron | 30.0% |
| !! | CAAAAGCATTAACATGATGA+TGG | + | chr1_1:71909307-71909326 | None:intergenic | 30.0% |
| ! | CATCATCATGTTAATGCTTT+TGG | - | chr1_1:71909305-71909324 | Msa0041490:intron | 30.0% |
| GAAAGCAATTGTCAATCAAA+AGG | + | chr1_1:71909548-71909567 | None:intergenic | 30.0% | |
| ! | CATTACATTAGTTGGTTTCA+TGG | + | chr1_1:71909615-71909634 | None:intergenic | 30.0% |
| ! | GTAAGACAAAAAGCATAGAA+AGG | + | chr1_1:71909652-71909671 | None:intergenic | 30.0% |
| !! | TTCTATGCTTTTTGTCTTAC+AGG | - | chr1_1:71909652-71909671 | Msa0041490:CDS | 30.0% |
| !! | TCTATGCTTTTTGTCTTACA+GGG | - | chr1_1:71909653-71909672 | Msa0041490:CDS | 30.0% |
| TGCATACAACAAATAAACAG+CGG | + | chr1_1:71909684-71909703 | None:intergenic | 30.0% | |
| TTTACCAGATTTCCTGATAA+TGG | + | chr1_1:71909723-71909742 | None:intergenic | 30.0% | |
| ATGATCTACTCATAAAACCT+AGG | + | chr1_1:71909864-71909883 | None:intergenic | 30.0% | |
| !! | TAGGTTTTATGAGTAGATCA+TGG | - | chr1_1:71909863-71909882 | Msa0041490:CDS | 30.0% |
| TCATTTACTGCAATTTACTG+AGG | - | chr1_1:71910052-71910071 | Msa0041490:intron | 30.0% | |
| TCTTGAGATTTATACCTTTC+AGG | - | chr1_1:71910082-71910101 | Msa0041490:CDS | 30.0% | |
| ! | CAGTCTTTTCTTAAGGAAAA+TGG | + | chr1_1:71910143-71910162 | None:intergenic | 30.0% |
| ! | TTTTCCTTAAGAAAAGACTG+AGG | - | chr1_1:71910143-71910162 | Msa0041490:intron | 30.0% |
| ! | CTTGTAGTGTTTTACTTTGT+CGG | - | chr1_1:71910187-71910206 | Msa0041490:intron | 30.0% |
| !! | CCTTAGTCTTTTCATAAAGA+TGG | + | chr1_1:71910220-71910239 | None:intergenic | 30.0% |
| CCATCTTTATGAAAAGACTA+AGG | - | chr1_1:71910217-71910236 | Msa0041490:intron | 30.0% | |
| !!! | GAAATTTTATTCAAGTTGCC+AGG | - | chr1_1:71910432-71910451 | Msa0041490:intron | 30.0% |
| ACACATCAAATAGGAATATG+GGG | + | chr1_1:71910499-71910518 | None:intergenic | 30.0% | |
| !!! | GAGTTTAAGAGCAAGTTTTT+TGG | - | chr1_1:71910670-71910689 | Msa0041490:CDS | 30.0% |
| CACACAAACTGAAAATTTCA+AGG | + | chr1_1:71910831-71910850 | None:intergenic | 30.0% | |
| ! | CTTGAAATTTTCAGTTTGTG+TGG | - | chr1_1:71910829-71910848 | Msa0041490:intron | 30.0% |
| ! | AATGGTTAGTACTGAAAGTT+GGG | - | chr1_1:71910927-71910946 | Msa0041490:five_prime_UTR | 30.0% |
| !! | CTTCACAAAAGAGGGTATTA+GGG | + | chr1_1:71902936-71902955 | None:intergenic | 35.0% |
| !! | TCTTCACAAAAGAGGGTATT+AGG | + | chr1_1:71902937-71902956 | None:intergenic | 35.0% |
| ! | AATACCCTCTTTTGTGAAGA+AGG | - | chr1_1:71902937-71902956 | Msa0041490:three_prime_UTR | 35.0% |
| GAAACCTTCTTCACAAAAGA+GGG | + | chr1_1:71902944-71902963 | None:intergenic | 35.0% | |
| TGAAACCTTCTTCACAAAAG+AGG | + | chr1_1:71902945-71902964 | None:intergenic | 35.0% | |
| TGATGAACTTACAATGAGCA+TGG | + | chr1_1:71903047-71903066 | None:intergenic | 35.0% | |
| TCAATTAAGGGAACAACATC+AGG | + | chr1_1:71903235-71903254 | None:intergenic | 35.0% | |
| GGAACACAAGCATCAATTAA+GGG | + | chr1_1:71903247-71903266 | None:intergenic | 35.0% | |
| TGGAACACAAGCATCAATTA+AGG | + | chr1_1:71903248-71903267 | None:intergenic | 35.0% | |
| GATGCTTGTGTTCCAAAAAA+CGG | - | chr1_1:71903253-71903272 | Msa0041490:three_prime_UTR | 35.0% | |
| !!! | GCATGTTTAACACCGTTTTT+TGG | + | chr1_1:71903268-71903287 | None:intergenic | 35.0% |
| TTAGTGTATGTATGGTTTCG+TGG | + | chr1_1:71903706-71903725 | None:intergenic | 35.0% | |
| GAACGAGGATTATTGAATTC+CGG | + | chr1_1:71903859-71903878 | None:intergenic | 35.0% | |
| TTCAATAATCCTCGTTCAGT+CGG | - | chr1_1:71903862-71903881 | Msa0041490:intron | 35.0% | |
| !! | GTGTGTGATTTTGTTTGTGT+AGG | - | chr1_1:71903964-71903983 | Msa0041490:intron | 35.0% |
| ! | TGGAGGGAGATTTTTCATAA+TGG | + | chr1_1:71903990-71904009 | None:intergenic | 35.0% |
| TTGTGTGTCCTCAAATTTCT+AGG | - | chr1_1:71904108-71904127 | Msa0041490:intron | 35.0% | |
| ! | AACACTAGCCTAGAAATTTG+AGG | + | chr1_1:71904119-71904138 | None:intergenic | 35.0% |
| GCATAATCCAAACAACACAT+AGG | + | chr1_1:71904160-71904179 | None:intergenic | 35.0% | |
| !! | TTACCGATGGTATTGATTCA+TGG | - | chr1_1:71904224-71904243 | Msa0041490:CDS | 35.0% |
| !! | TACCGATGGTATTGATTCAT+GGG | - | chr1_1:71904225-71904244 | Msa0041490:CDS | 35.0% |
| ATAGCCAAAGAAATGCATGT+TGG | - | chr1_1:71904298-71904317 | Msa0041490:intron | 35.0% | |
| !!! | CATAGTTTTAAAACTCGGCT+CGG | - | chr1_1:71904519-71904538 | Msa0041490:intron | 35.0% |
| AAGAACTGAACTTGGAACAT+CGG | + | chr1_1:71905156-71905175 | None:intergenic | 35.0% | |
| ATAGCTCAAAGACAAGGTTA+TGG | + | chr1_1:71905582-71905601 | None:intergenic | 35.0% | |
| CATTCACAACCTTATGTCTT+TGG | - | chr1_1:71905611-71905630 | Msa0041490:CDS | 35.0% | |
| !! | CAACCATTTCTAGTTGTCTT+TGG | - | chr1_1:71905649-71905668 | Msa0041490:CDS | 35.0% |
| ATCCCAAAGACAACTAGAAA+TGG | + | chr1_1:71905655-71905674 | None:intergenic | 35.0% | |
| TGGTGGCAATTGAAATAGTT+CGG | + | chr1_1:71905800-71905819 | None:intergenic | 35.0% | |
| CGAACTGCAAAATAAATGCA+CGG | + | chr1_1:71905918-71905937 | None:intergenic | 35.0% | |
| !!! | CGTGCATTTATTTTGCAGTT+CGG | - | chr1_1:71905916-71905935 | Msa0041490:intron | 35.0% |
| !!! | GTGCATTTATTTTGCAGTTC+GGG | - | chr1_1:71905917-71905936 | Msa0041490:intron | 35.0% |
| CAGATTCCTTAACATCTTCT+GGG | + | chr1_1:71905978-71905997 | None:intergenic | 35.0% | |
| TCAGATTCCTTAACATCTTC+TGG | + | chr1_1:71905979-71905998 | None:intergenic | 35.0% | |
| ATCTGATATTGGAGATCTAC+AGG | - | chr1_1:71905993-71906012 | Msa0041490:intron | 35.0% | |
| !!! | TTTTTGGTTAACTAGCTGCA+TGG | - | chr1_1:71906110-71906129 | Msa0041490:intron | 35.0% |
| !!! | TATAAGCCGCTACTTTTTCA+CGG | - | chr1_1:71906227-71906246 | Msa0041490:intron | 35.0% |
| CAATAAACATTGCGACTTCA+AGG | + | chr1_1:71906488-71906507 | None:intergenic | 35.0% | |
| CTTGAAGTCGCAATGTTTAT+TGG | - | chr1_1:71906486-71906505 | Msa0041490:CDS | 35.0% | |
| ! | TCATCGTTATTTAGCTTCGA+TGG | - | chr1_1:71906533-71906552 | Msa0041490:CDS | 35.0% |
| !!! | ATTGGAGTTGGTGCATTTTT+AGG | - | chr1_1:71906582-71906601 | Msa0041490:intron | 35.0% |
| ! | TGTGCCTTTTTCTTGAAATC+AGG | + | chr1_1:71906646-71906665 | None:intergenic | 35.0% |
| !! | CCACTCTGAAATCAAAATTC+AGG | + | chr1_1:71906791-71906810 | None:intergenic | 35.0% |
| !!! | CCTGAATTTTGATTTCAGAG+TGG | - | chr1_1:71906788-71906807 | Msa0041490:intron | 35.0% |
| AGAGATGAGAAATTCCTCAT+CGG | + | chr1_1:71906944-71906963 | None:intergenic | 35.0% | |
| !!! | AATTCTGTCTGTTTTTGGTG+TGG | - | chr1_1:71907031-71907050 | Msa0041490:intron | 35.0% |
| !! | GGCTTTTGTTTAATATGACG+TGG | - | chr1_1:71907052-71907071 | Msa0041490:CDS | 35.0% |
| ATTTATGTTGCAGTCGTTAC+AGG | - | chr1_1:71907281-71907300 | Msa0041490:CDS | 35.0% | |
| TTGGAGAAACTGGAGAAATT+AGG | - | chr1_1:71907408-71907427 | Msa0041490:intron | 35.0% | |
| TGGAGAAACTGGAGAAATTA+GGG | - | chr1_1:71907409-71907428 | Msa0041490:intron | 35.0% | |
| ! | TCTCTTTTCACAGCAATTAG+TGG | + | chr1_1:71907489-71907508 | None:intergenic | 35.0% |
| CTAATTGCTGTGAAAAGAGA+TGG | - | chr1_1:71907489-71907508 | Msa0041490:intron | 35.0% | |
| ! | AGAAGTGTATGAGATAGGTT+AGG | - | chr1_1:71907677-71907696 | Msa0041490:intron | 35.0% |
| TTACCTTCAAGTCTGACTAT+CGG | + | chr1_1:71907722-71907741 | None:intergenic | 35.0% | |
| GACTTGAAGGTAAATCACAA+AGG | - | chr1_1:71907729-71907748 | Msa0041490:intron | 35.0% | |
| TGAATGTCGAAAAGCTTGAT+TGG | - | chr1_1:71908032-71908051 | Msa0041490:intron | 35.0% | |
| !!! | TCCCTTTTGGTTTTTCTATC+AGG | - | chr1_1:71908175-71908194 | Msa0041490:intron | 35.0% |
| GCCTGATAGAAAAACCAAAA+GGG | + | chr1_1:71908179-71908198 | None:intergenic | 35.0% | |
| GGATATTCATTTGGATCCTT+TGG | + | chr1_1:71908224-71908243 | None:intergenic | 35.0% | |
| !!! | ATAGGTTTTGGTCTTGTTTG+TGG | - | chr1_1:71908257-71908276 | Msa0041490:intron | 35.0% |
| TTCTGTTTGTGGAAGATCTA+TGG | - | chr1_1:71908454-71908473 | Msa0041490:intron | 35.0% | |
| AGAGATTGAGAAAACATCAG+AGG | - | chr1_1:71908568-71908587 | Msa0041490:intron | 35.0% | |
| ! | CACTAACGTTTTCCCATTAA+AGG | - | chr1_1:71908628-71908647 | Msa0041490:intron | 35.0% |
| ! | TGCTTTTCATTCTGCTCTAA+TGG | - | chr1_1:71908784-71908803 | Msa0041490:intron | 35.0% |
| AAAAAGGAGCTTATTTGCGA+AGG | + | chr1_1:71908921-71908940 | None:intergenic | 35.0% | |
| ! | CTCCTTTTTCCAATTTCACA+TGG | - | chr1_1:71908932-71908951 | Msa0041490:intron | 35.0% |
| AAGCATCTGATCAAAGTTGA+AGG | + | chr1_1:71909380-71909399 | None:intergenic | 35.0% | |
| TGATCAGATGCTTAATGACA+AGG | - | chr1_1:71909387-71909406 | Msa0041490:intron | 35.0% | |
| !! | ATTTGTTGTATGCACATGCT+AGG | - | chr1_1:71909690-71909709 | Msa0041490:CDS | 35.0% |
| TGTTCCATTATCAGGAAATC+TGG | - | chr1_1:71909716-71909735 | Msa0041490:CDS | 35.0% | |
| TTTCTTAAGGAAAATGGACC+AGG | + | chr1_1:71910137-71910156 | None:intergenic | 35.0% | |
| ATGTCAGTGCATATGTTGTT+TGG | + | chr1_1:71910309-71910328 | None:intergenic | 35.0% | |
| AGGTATTCACATAACACGTT+TGG | + | chr1_1:71910385-71910404 | None:intergenic | 35.0% | |
| ATCAAATAGGAATATGGGGA+GGG | + | chr1_1:71910495-71910514 | None:intergenic | 35.0% | |
| TTAATGTGAATGCCTTTGTC+AGG | - | chr1_1:71910520-71910539 | Msa0041490:intron | 35.0% | |
| AAGCAACACTTATTGTGATG+AGG | - | chr1_1:71910585-71910604 | Msa0041490:intron | 35.0% | |
| TGTAAACTGGATCAATTCCA+AGG | + | chr1_1:71910625-71910644 | None:intergenic | 35.0% | |
| TAAACTCCTCATTGAGATAG+CGG | + | chr1_1:71910657-71910676 | None:intergenic | 35.0% | |
| !! | CTGTTGGTACATTTTTCGAA+AGG | + | chr1_1:71910883-71910902 | None:intergenic | 35.0% |
| ! | CAATGGTTAGTACTGAAAGT+TGG | - | chr1_1:71910926-71910945 | Msa0041490:five_prime_UTR | 35.0% |
| GGGATAAGTGATAAGTGTAG+AGG | + | chr1_1:71902976-71902995 | None:intergenic | 40.0% | |
| TAAAACGCTAAGTGGGTGTT+TGG | + | chr1_1:71903738-71903757 | None:intergenic | 40.0% | |
| GTGCAACTAAAACGCTAAGT+GGG | + | chr1_1:71903745-71903764 | None:intergenic | 40.0% | |
| AGTGCAACTAAAACGCTAAG+TGG | + | chr1_1:71903746-71903765 | None:intergenic | 40.0% | |
| TAAGATTAAAGGGAGGCAAC+CGG | - | chr1_1:71903837-71903856 | Msa0041490:intron | 40.0% | |
| ATTCTACCATCTCTGATGGA+GGG | + | chr1_1:71904006-71904025 | None:intergenic | 40.0% | |
| ! | TTGTCTCCCTATGTGTTGTT+TGG | - | chr1_1:71904150-71904169 | Msa0041490:intron | 40.0% |
| TTACAGAAGATGCTTACCGA+TGG | - | chr1_1:71904211-71904230 | Msa0041490:CDS | 40.0% | |
| TGCCCATGAATCAATACCAT+CGG | + | chr1_1:71904230-71904249 | None:intergenic | 40.0% | |
| ACTTCCAATCAAGAGGGTTA+TGG | - | chr1_1:71904255-71904274 | Msa0041490:CDS | 40.0% | |
| TCAACCATAACCCTCTTGAT+TGG | + | chr1_1:71904262-71904281 | None:intergenic | 40.0% | |
| ! | TTCTTTGGCTATATTCGGTG+AGG | + | chr1_1:71904290-71904309 | None:intergenic | 40.0% |
| GTGACCAACATGCATTTCTT+TGG | + | chr1_1:71904305-71904324 | None:intergenic | 40.0% | |
| CACCTGAGGTCAACAATTAT+CGG | - | chr1_1:71904322-71904341 | Msa0041490:intron | 40.0% | |
| ACCTGAGGTCAACAATTATC+GGG | - | chr1_1:71904323-71904342 | Msa0041490:intron | 40.0% | |
| !! | GTTGACTCGGTTAGATAACT+CGG | - | chr1_1:71904633-71904652 | Msa0041490:intron | 40.0% |
| TTCTTGCACATACGTGTTAC+TGG | + | chr1_1:71905024-71905043 | None:intergenic | 40.0% | |
| GGGTTTGTATTAACAGTTGG+TGG | + | chr1_1:71905104-71905123 | None:intergenic | 40.0% | |
| CATTTCAACTGCGAAGAAAG+AGG | + | chr1_1:71905216-71905235 | None:intergenic | 40.0% | |
| ! | GTGGTTTTTGTGCAGAAAAC+CGG | - | chr1_1:71905324-71905343 | Msa0041490:intron | 40.0% |
| TGCTATACACTGTCAAAGCT+AGG | - | chr1_1:71905544-71905563 | Msa0041490:intron | 40.0% | |
| CTCAAAGACAAGGTTATGGA+TGG | + | chr1_1:71905578-71905597 | None:intergenic | 40.0% | |
| AAGAATCGCCCAAAGACATA+AGG | + | chr1_1:71905623-71905642 | None:intergenic | 40.0% | |
| AATAGTTCGGTATCTATGGG+TGG | + | chr1_1:71905787-71905806 | None:intergenic | 40.0% | |
| GGTTCGGAAATTTCTCAAAG+AGG | + | chr1_1:71905957-71905976 | None:intergenic | 40.0% | |
| TCCTTAACATCTTCTGGGTT+CGG | + | chr1_1:71905973-71905992 | None:intergenic | 40.0% | |
| TCTACAGGTGAGACAACATA+TGG | - | chr1_1:71906008-71906027 | Msa0041490:intron | 40.0% | |
| ACTGTTCCGTGAAAAAGTAG+CGG | + | chr1_1:71906236-71906255 | None:intergenic | 40.0% | |
| !!! | ATTTTGATTTCAGAGTGGGG+AGG | - | chr1_1:71906793-71906812 | Msa0041490:intron | 40.0% |
| ! | TTTCTTTTGCATCTCCGATG+AGG | - | chr1_1:71906927-71906946 | Msa0041490:intron | 40.0% |
| ! | TCTTTTTCCTTGCTCTGTGA+TGG | - | chr1_1:71907128-71907147 | Msa0041490:intron | 40.0% |
| CTCTGTGATGGTCATAAGTT+TGG | - | chr1_1:71907140-71907159 | Msa0041490:intron | 40.0% | |
| ! | TCACTGATGGGCGATATATT+TGG | - | chr1_1:71907343-71907362 | Msa0041490:intron | 40.0% |
| !! | AATGGATTGAAGAAGCTCTC+TGG | + | chr1_1:71907375-71907394 | None:intergenic | 40.0% |
| TCCATTAATCCCTCCAACTT+TGG | - | chr1_1:71907389-71907408 | Msa0041490:intron | 40.0% | |
| TCCAAAGTTGGAGGGATTAA+TGG | + | chr1_1:71907393-71907412 | None:intergenic | 40.0% | |
| TTCTCCAGTTTCTCCAAAGT+TGG | + | chr1_1:71907405-71907424 | None:intergenic | 40.0% | |
| ! | TGCTCGTGTGATATTTGTTG+AGG | - | chr1_1:71907452-71907471 | Msa0041490:intron | 40.0% |
| ! | GCTCGTGTGATATTTGTTGA+GGG | - | chr1_1:71907453-71907472 | Msa0041490:intron | 40.0% |
| ATTGCTGTGAAAAGAGATGG+AGG | - | chr1_1:71907492-71907511 | Msa0041490:intron | 40.0% | |
| CAACTGATCTAGCATCACTT+TGG | - | chr1_1:71907529-71907548 | Msa0041490:intron | 40.0% | |
| TGACTATCGGAATACCCTTT+GGG | + | chr1_1:71907709-71907728 | None:intergenic | 40.0% | |
| ATTCCGATAGTCAGACTTGA+AGG | - | chr1_1:71907716-71907735 | Msa0041490:intron | 40.0% | |
| ATGTTACAGATGTTGGGCAA+TGG | - | chr1_1:71908062-71908081 | Msa0041490:intron | 40.0% | |
| GGCCTGATAGAAAAACCAAA+AGG | + | chr1_1:71908180-71908199 | None:intergenic | 40.0% | |
| ! | GGTTTTTCTATCAGGCCTTT+AGG | - | chr1_1:71908183-71908202 | Msa0041490:intron | 40.0% |
| AAAGTTGCTCTTCTTGAACG+TGG | - | chr1_1:71908362-71908381 | Msa0041490:intron | 40.0% | |
| !! | TTTGATTCTGGCTCACATGA+AGG | + | chr1_1:71908424-71908443 | None:intergenic | 40.0% |
| TAATGCTAAAGATTGGACGG+AGG | - | chr1_1:71908544-71908563 | Msa0041490:intron | 40.0% | |
| GAGAAAACATCAGAGGCAAT+TGG | - | chr1_1:71908575-71908594 | Msa0041490:CDS | 40.0% | |
| ACATCAGAGGCAATTGGATA+TGG | - | chr1_1:71908581-71908600 | Msa0041490:CDS | 40.0% | |
| CATCAGAGGCAATTGGATAT+GGG | - | chr1_1:71908582-71908601 | Msa0041490:CDS | 40.0% | |
| ATCAGAGGCAATTGGATATG+GGG | - | chr1_1:71908583-71908602 | Msa0041490:CDS | 40.0% | |
| AGGCTTATATTTAGGGACTG+AGG | - | chr1_1:71909163-71909182 | Msa0041490:intron | 40.0% | |
| GGTAGTTAAAAACCGACACA+CGG | - | chr1_1:71909184-71909203 | Msa0041490:intron | 40.0% | |
| GTAGTTAAAAACCGACACAC+GGG | - | chr1_1:71909185-71909204 | Msa0041490:intron | 40.0% | |
| ! | ACACGGGTTGCTTCTATAAA+TGG | - | chr1_1:71909201-71909220 | Msa0041490:intron | 40.0% |
| ATTCAGCATTCCAAGAACAG+AGG | + | chr1_1:71909267-71909286 | None:intergenic | 40.0% | |
| !! | AATATTTTCTGAGAGGGGAG+CGG | + | chr1_1:71909497-71909516 | None:intergenic | 40.0% |
| CTAGGATCTGTTCCATTATC+AGG | - | chr1_1:71909708-71909727 | Msa0041490:CDS | 40.0% | |
| TTTACCAACTTGTGACAGAC+TGG | - | chr1_1:71909987-71910006 | Msa0041490:intron | 40.0% | |
| TTACCAACTTGTGACAGACT+GGG | - | chr1_1:71909988-71910007 | Msa0041490:intron | 40.0% | |
| CTCTGCAAAAATAGCCTGAA+AGG | + | chr1_1:71910099-71910118 | None:intergenic | 40.0% | |
| TTAAGGAAAATGGACCAGGA+TGG | + | chr1_1:71910133-71910152 | None:intergenic | 40.0% | |
| ! | CATGCCTCAGTCTTTTCTTA+AGG | + | chr1_1:71910150-71910169 | None:intergenic | 40.0% |
| ! | AGTGTTTTACTTTGTCGGTC+TGG | - | chr1_1:71910192-71910211 | Msa0041490:intron | 40.0% |
| ! | GTGTTTTACTTTGTCGGTCT+GGG | - | chr1_1:71910193-71910212 | Msa0041490:intron | 40.0% |
| TAAGCGACTATATGTTCACG+CGG | - | chr1_1:71910249-71910268 | Msa0041490:intron | 40.0% | |
| CATCAAATAGGAATATGGGG+AGG | + | chr1_1:71910496-71910515 | None:intergenic | 40.0% | |
| ! | AATGCCTTTGTCAGGTTGTT+GGG | - | chr1_1:71910528-71910547 | Msa0041490:intron | 40.0% |
| !! | AGGCATTGCTTTTATCTCCT+TGG | - | chr1_1:71910605-71910624 | Msa0041490:intron | 40.0% |
| ! | GCGGATCATAACTTGTAAAC+TGG | + | chr1_1:71910638-71910657 | None:intergenic | 40.0% |
| TATGATCCGCTATCTCAATG+AGG | - | chr1_1:71910648-71910667 | Msa0041490:intron | 40.0% | |
| GTTCAATCACTCTACCTCTT+CGG | - | chr1_1:71910751-71910770 | Msa0041490:CDS | 40.0% | |
| TACTAACCATTGCAAACAGC+GGG | + | chr1_1:71910918-71910937 | None:intergenic | 40.0% | |
| GTACTAACCATTGCAAACAG+CGG | + | chr1_1:71910919-71910938 | None:intergenic | 40.0% | |
| AGCAATTGGCCACGTTGTTT+CGG | - | chr1_1:71903179-71903198 | Msa0041490:three_prime_UTR | 45.0% | |
| GGAACAACATCAGGTTCAGT+GGG | + | chr1_1:71903226-71903245 | None:intergenic | 45.0% | |
| AAATCTCCCTCCATCAGAGA+TGG | - | chr1_1:71903997-71904016 | Msa0041490:intron | 45.0% | |
| GATTCTACCATCTCTGATGG+AGG | + | chr1_1:71904007-71904026 | None:intergenic | 45.0% | |
| CACGATTCTACCATCTCTGA+TGG | + | chr1_1:71904010-71904029 | None:intergenic | 45.0% | |
| AGAGATGGTAGAATCGTGCT+CGG | - | chr1_1:71904012-71904031 | Msa0041490:intron | 45.0% | |
| TCTTCTGTAAGCTCTGCAGA+AGG | + | chr1_1:71904201-71904220 | None:intergenic | 45.0% | |
| ACCTCGACTTCCAATCAAGA+GGG | - | chr1_1:71904249-71904268 | Msa0041490:CDS | 45.0% | |
| AAATGCATGTTGGTCACCTG+AGG | - | chr1_1:71904308-71904327 | Msa0041490:intron | 45.0% | |
| CCTGAGGTCAACAATTATCG+GGG | - | chr1_1:71904324-71904343 | Msa0041490:intron | 45.0% | |
| CTGATCCGCCGAAATCATAT+CGG | - | chr1_1:71904388-71904407 | Msa0041490:intron | 45.0% | |
| AGTCACCGATATGATTTCGG+CGG | + | chr1_1:71904396-71904415 | None:intergenic | 45.0% | |
| CCCAGTCACCGATATGATTT+CGG | + | chr1_1:71904399-71904418 | None:intergenic | 45.0% | |
| CCGAAATCATATCGGTGACT+GGG | - | chr1_1:71904396-71904415 | Msa0041490:intron | 45.0% | |
| CGAAATCATATCGGTGACTG+GGG | - | chr1_1:71904397-71904416 | Msa0041490:intron | 45.0% | |
| ATGACTGAACCGGATCAACT+CGG | - | chr1_1:71904611-71904630 | Msa0041490:intron | 45.0% | |
| AACTGAACTTGGAACATCGG+CGG | + | chr1_1:71905153-71905172 | None:intergenic | 45.0% | |
| GCGAAGAAAGAGGAAGAAGT+AGG | + | chr1_1:71905206-71905225 | None:intergenic | 45.0% | |
| GCACAAAAACCACACAGAGA+AGG | + | chr1_1:71905317-71905336 | None:intergenic | 45.0% | |
| ! | TTTTGTGCAGAAAACCGGTC+CGG | - | chr1_1:71905329-71905348 | Msa0041490:intron | 45.0% |
| TTCCATACGGGCGAATTACA+TGG | - | chr1_1:71905406-71905425 | Msa0041490:intron | 45.0% | |
| !! | TTATATCACCGGTTCACGGT+TGG | - | chr1_1:71905455-71905474 | Msa0041490:intron | 45.0% |
| ! | CATAGTTTTCAAACCCGGAC+CGG | + | chr1_1:71905500-71905519 | None:intergenic | 45.0% |
| TCCGAACCCAGAAGATGTTA+AGG | - | chr1_1:71905969-71905988 | Msa0041490:intron | 45.0% | |
| ! | TTTCCTCCAAACGGATTCCA+AGG | + | chr1_1:71906892-71906911 | None:intergenic | 45.0% |
| TGGAATCCGTTTGGAGGAAA+TGG | - | chr1_1:71906892-71906911 | Msa0041490:intron | 45.0% | |
| TCCGTTTGGAGGAAATGGTA+AGG | - | chr1_1:71906897-71906916 | Msa0041490:intron | 45.0% | |
| CCCTTACCATTTCCTCCAAA+CGG | + | chr1_1:71906901-71906920 | None:intergenic | 45.0% | |
| CCGTTTGGAGGAAATGGTAA+GGG | - | chr1_1:71906898-71906917 | Msa0041490:intron | 45.0% | |
| GGCACAGATAGAATTCTGAG+AGG | + | chr1_1:71906988-71907007 | None:intergenic | 45.0% | |
| CTTATGACCATCACAGAGCA+AGG | + | chr1_1:71907138-71907157 | None:intergenic | 45.0% | |
| GTGATGGTCATAAGTTTGGC+TGG | - | chr1_1:71907144-71907163 | Msa0041490:intron | 45.0% | |
| CCAGTTTCTCCAAAGTTGGA+GGG | + | chr1_1:71907401-71907420 | None:intergenic | 45.0% | |
| TCCAGTTTCTCCAAAGTTGG+AGG | + | chr1_1:71907402-71907421 | None:intergenic | 45.0% | |
| GGGCTGATTGAAGACAATGA+TGG | - | chr1_1:71907429-71907448 | Msa0041490:intron | 45.0% | |
| TAGGTTAGGTGAAGACCCAA+AGG | - | chr1_1:71907691-71907710 | Msa0041490:intron | 45.0% | |
| AGGTTAGGTGAAGACCCAAA+GGG | - | chr1_1:71907692-71907711 | Msa0041490:intron | 45.0% | |
| CTGACTATCGGAATACCCTT+TGG | + | chr1_1:71907710-71907729 | None:intergenic | 45.0% | |
| TAGTGTTTGCTTCGCGTATC+TGG | - | chr1_1:71907821-71907840 | Msa0041490:intron | 45.0% | |
| !! | GGTCTTGTTTGTGGTGATGA+CGG | - | chr1_1:71908266-71908285 | Msa0041490:intron | 45.0% |
| CTGCTCTAATGGTTCGAATC+TGG | - | chr1_1:71908795-71908814 | Msa0041490:intron | 45.0% | |
| TATAGAAGCAACCCGTGTGT+CGG | + | chr1_1:71909199-71909218 | None:intergenic | 45.0% | |
| TCTGCTTATGCCTCTGTTCT+TGG | - | chr1_1:71909254-71909273 | Msa0041490:intron | 45.0% | |
| !! | ATATTTTCTGAGAGGGGAGC+GGG | + | chr1_1:71909496-71909515 | None:intergenic | 45.0% |
| ATTCCCAGTCTGTCACAAGT+TGG | + | chr1_1:71909994-71910013 | None:intergenic | 45.0% | |
| CTTGTGACAGACTGGGAATT+TGG | - | chr1_1:71909995-71910014 | Msa0041490:intron | 45.0% | |
| !! | ACAGACTGGGAATTTGGTGT+TGG | - | chr1_1:71910001-71910020 | Msa0041490:intron | 45.0% |
| CATGAAGACGAGCGTACATT+GGG | - | chr1_1:71910026-71910045 | Msa0041490:intron | 45.0% | |
| GAGTTCTTCTTTGTCCATCC+TGG | - | chr1_1:71910116-71910135 | Msa0041490:CDS | 45.0% | |
| AAGCGACTATATGTTCACGC+GGG | - | chr1_1:71910250-71910269 | Msa0041490:intron | 45.0% | |
| ! | GAATGCCTTTGTCAGGTTGT+TGG | - | chr1_1:71910527-71910546 | Msa0041490:intron | 45.0% |
| CCTACACTTCTGTGCACTAA+AGG | + | chr1_1:71910708-71910727 | None:intergenic | 45.0% | |
| ! | CCTTTAGTGCACAGAAGTGT+AGG | - | chr1_1:71910705-71910724 | Msa0041490:CDS | 45.0% |
| TCTACCTCTTCGGTTCTCTT+CGG | - | chr1_1:71910761-71910780 | Msa0041490:CDS | 45.0% | |
| ACTAACCATTGCAAACAGCG+GGG | + | chr1_1:71910917-71910936 | None:intergenic | 45.0% | |
| !! | CAATAATTAATAAAAAAAAA+AGG | + | chr1_1:71903911-71903930 | None:intergenic | 5.0% |
| !! | TTTAATTAAAAAAATGAAAA+TGG | + | chr1_1:71906375-71906394 | None:intergenic | 5.0% |
| GAGTGAGAGAGAGAGAGAGA+TGG | + | chr1_1:71903003-71903022 | None:intergenic | 50.0% | |
| AATTGCTTCCTGACACTCGC+AGG | + | chr1_1:71903166-71903185 | None:intergenic | 50.0% | |
| TGCGAGTGTCAGGAAGCAAT+TGG | - | chr1_1:71903165-71903184 | Msa0041490:three_prime_UTR | 50.0% | |
| ! | GCAATTGGCCACGTTGTTTC+GGG | - | chr1_1:71903180-71903199 | Msa0041490:three_prime_UTR | 50.0% |
| GGGAACAACATCAGGTTCAG+TGG | + | chr1_1:71903227-71903246 | None:intergenic | 50.0% | |
| TAATCCTCGTTCAGTCGGAG+AGG | - | chr1_1:71903867-71903886 | Msa0041490:intron | 50.0% | |
| TATACCTCTCCGACTGAACG+AGG | + | chr1_1:71903874-71903893 | None:intergenic | 50.0% | |
| CACCTCGACTTCCAATCAAG+AGG | - | chr1_1:71904248-71904267 | Msa0041490:CDS | 50.0% | |
| ACCCTCTTGATTGGAAGTCG+AGG | + | chr1_1:71904253-71904272 | None:intergenic | 50.0% | |
| CCCCGATAATTGTTGACCTC+AGG | + | chr1_1:71904327-71904346 | None:intergenic | 50.0% | |
| TTATCGGGGACACACTAGCA+CGG | - | chr1_1:71904338-71904357 | Msa0041490:intron | 50.0% | |
| TTTCGGCGGATCAGACATTC+AGG | + | chr1_1:71904382-71904401 | None:intergenic | 50.0% | |
| GCCGAAATCATATCGGTGAC+TGG | - | chr1_1:71904395-71904414 | Msa0041490:intron | 50.0% | |
| !! | GTACTGGGTCACTGGTTCAA+TGG | - | chr1_1:71904559-71904578 | Msa0041490:CDS | 50.0% |
| TGGTCGAACCACTGAGTCAT+TGG | - | chr1_1:71904579-71904598 | Msa0041490:CDS | 50.0% | |
| GTTGATCCGGTTCAGTCATG+CGG | + | chr1_1:71904610-71904629 | None:intergenic | 50.0% | |
| ! | CACTCGGTGAGTTTACGAAC+CGG | + | chr1_1:71905351-71905370 | None:intergenic | 50.0% |
| TCGTAAACTCACCGAGTGGT+CGG | - | chr1_1:71905353-71905372 | Msa0041490:CDS | 50.0% | |
| GTAATTCGCCCGTATGGAAC+CGG | + | chr1_1:71905405-71905424 | None:intergenic | 50.0% | |
| GTTCGAGCGAGAAGTTGGAT+CGG | + | chr1_1:71905432-71905451 | None:intergenic | 50.0% | |
| ATCCAACTTCTCGCTCGAAC+CGG | - | chr1_1:71905432-71905451 | Msa0041490:intron | 50.0% | |
| GCTCGAACCGGTTATATCAC+CGG | - | chr1_1:71905444-71905463 | Msa0041490:intron | 50.0% | |
| CCGTGAACCGGTGATATAAC+CGG | + | chr1_1:71905454-71905473 | None:intergenic | 50.0% | |
| !! | CCGGTTATATCACCGGTTCA+CGG | - | chr1_1:71905451-71905470 | Msa0041490:intron | 50.0% |
| CTTTCTGCCCCCTATTTGCA+AGG | - | chr1_1:71906733-71906752 | Msa0041490:intron | 50.0% | |
| TCCCCACGACCTTGCAAATA+GGG | + | chr1_1:71906745-71906764 | None:intergenic | 50.0% | |
| TTCCCCACGACCTTGCAAAT+AGG | + | chr1_1:71906746-71906765 | None:intergenic | 50.0% | |
| TTTGCAAGGTCGTGGGGAAT+TGG | - | chr1_1:71906747-71906766 | Msa0041490:intron | 50.0% | |
| TTCCATGCCGTGCGATACTT+GGG | + | chr1_1:71906821-71906840 | None:intergenic | 50.0% | |
| TTTCCATGCCGTGCGATACT+TGG | + | chr1_1:71906822-71906841 | None:intergenic | 50.0% | |
| AACAAGGTCTATCAGCGCCT+TGG | - | chr1_1:71906872-71906891 | Msa0041490:intron | 50.0% | |
| TTGAAGAAGCTCTCTGGCTG+TGG | + | chr1_1:71907369-71907388 | None:intergenic | 50.0% | |
| ! | CCCTCCAACTTTGGAGAAAC+TGG | - | chr1_1:71907398-71907417 | Msa0041490:intron | 50.0% |
| AAAAGCCTCTTTCCTTCCCG+AGG | + | chr1_1:71907847-71907866 | None:intergenic | 50.0% | |
| ACCACTTGAACCTTGCATGC+AGG | - | chr1_1:71908002-71908021 | Msa0041490:intron | 50.0% | |
| ACCTGCATGCAAGGTTCAAG+TGG | + | chr1_1:71908006-71908025 | None:intergenic | 50.0% | |
| TCAGACGATACCTGCATGCA+AGG | + | chr1_1:71908015-71908034 | None:intergenic | 50.0% | |
| GCATGAAGACGAGCGTACAT+TGG | - | chr1_1:71910025-71910044 | Msa0041490:intron | 50.0% | |
| TGTATCCCCGCTGTTTGCAA+TGG | - | chr1_1:71910909-71910928 | Msa0041490:five_prime_UTR | 50.0% | |
| AGAGAGAGAGAGATGGCGAC+GGG | + | chr1_1:71902996-71903015 | None:intergenic | 55.0% | |
| GAGAGAGAGAGAGATGGCGA+CGG | + | chr1_1:71902997-71903016 | None:intergenic | 55.0% | |
| TAGATGCTCCTGCGAGTGTC+AGG | - | chr1_1:71903155-71903174 | Msa0041490:three_prime_UTR | 55.0% | |
| GAGAGCTTCCCGAAACAACG+TGG | + | chr1_1:71903191-71903210 | None:intergenic | 55.0% | |
| GGTAGAATCGTGCTCGGTTG+CGG | - | chr1_1:71904018-71904037 | Msa0041490:intron | 55.0% | |
| GTAGAATCGTGCTCGGTTGC+GGG | - | chr1_1:71904019-71904038 | Msa0041490:intron | 55.0% | |
| ! | TATCGGTGACTGGGGTACTC+AGG | - | chr1_1:71904405-71904424 | Msa0041490:intron | 55.0% |
| !! | ACTCGGCTCGGTCATCGAAT+CGG | - | chr1_1:71904531-71904550 | Msa0041490:intron | 55.0% |
| !! | ATCGAATCGGCAGGGGTACT+GGG | - | chr1_1:71904544-71904563 | Msa0041490:CDS | 55.0% |
| CGGTTCGACCAATGACTCAG+TGG | + | chr1_1:71904590-71904609 | None:intergenic | 55.0% | |
| GTCGAACCGCATGACTGAAC+CGG | - | chr1_1:71904601-71904620 | Msa0041490:intron | 55.0% | |
| !! | CCGAGTCAACCGAGTTGATC+CGG | + | chr1_1:71904623-71904642 | None:intergenic | 55.0% |
| CCGGATCAACTCGGTTGACT+CGG | - | chr1_1:71904620-71904639 | Msa0041490:intron | 55.0% | |
| GCTCTCTCTCCTTCTCTGTG+TGG | - | chr1_1:71905305-71905324 | Msa0041490:intron | 55.0% | |
| GGTGAGTTTACGAACCGGAC+CGG | + | chr1_1:71905346-71905365 | None:intergenic | 55.0% | |
| CGGTTCGTAAACTCACCGAG+TGG | - | chr1_1:71905349-71905368 | Msa0041490:CDS | 55.0% | |
| TTCCGGTCAAACCGACCACT+CGG | + | chr1_1:71905367-71905386 | None:intergenic | 55.0% | |
| !! | TGGTCGGTTTGACCGGAAAC+CGG | - | chr1_1:71905369-71905388 | Msa0041490:CDS | 55.0% |
| CGTATGGAACCGGTGTGAAC+CGG | + | chr1_1:71905395-71905414 | None:intergenic | 55.0% | |
| !! | CGGTTCACACCGGTTCCATA+CGG | - | chr1_1:71905393-71905412 | Msa0041490:intron | 55.0% |
| !! | GGTTCACACCGGTTCCATAC+GGG | - | chr1_1:71905394-71905413 | Msa0041490:intron | 55.0% |
| GGCCATGTAATTCGCCCGTA+TGG | + | chr1_1:71905411-71905430 | None:intergenic | 55.0% | |
| !! | AACCGGTTCGAGCGAGAAGT+TGG | + | chr1_1:71905437-71905456 | None:intergenic | 55.0% |
| ! | TTTTCAAACCCGGACCGGAC+CGG | + | chr1_1:71905495-71905514 | None:intergenic | 55.0% |
| CCCACGACCTTGCAAATAGG+GGG | + | chr1_1:71906743-71906762 | None:intergenic | 55.0% | |
| CCCCCTATTTGCAAGGTCGT+GGG | - | chr1_1:71906740-71906759 | Msa0041490:intron | 55.0% | |
| CCCCACGACCTTGCAAATAG+GGG | + | chr1_1:71906744-71906763 | None:intergenic | 55.0% | |
| CCCCTATTTGCAAGGTCGTG+GGG | - | chr1_1:71906741-71906760 | Msa0041490:intron | 55.0% | |
| ! | GGAGGATCCCAAGTATCGCA+CGG | - | chr1_1:71906811-71906830 | Msa0041490:intron | 55.0% |
| ! | ATCCCAAGTATCGCACGGCA+TGG | - | chr1_1:71906816-71906835 | Msa0041490:intron | 55.0% |
| TCAGCGCCTTGGAATCCGTT+TGG | - | chr1_1:71906883-71906902 | Msa0041490:intron | 55.0% | |
| TTGCTTCGCGTATCTGGCCT+CGG | - | chr1_1:71907827-71907846 | Msa0041490:intron | 55.0% | |
| CTATCAGGCCTTTAGGCGTG+CGG | - | chr1_1:71908190-71908209 | Msa0041490:intron | 55.0% | |
| TATCAGGCCTTTAGGCGTGC+GGG | - | chr1_1:71908191-71908210 | Msa0041490:intron | 55.0% | |
| CAGCAGCGAGACTGTTCGAT+TGG | - | chr1_1:71908307-71908326 | Msa0041490:intron | 55.0% | |
| !! | GGGAGGGCATTCAAACTCGT+AGG | + | chr1_1:71910479-71910498 | None:intergenic | 55.0% |
| GCGACCCAACAACCTGACAA+AGG | + | chr1_1:71910535-71910554 | None:intergenic | 55.0% | |
| ! | TTGTCAGGTTGTTGGGTCGC+TGG | - | chr1_1:71910535-71910554 | Msa0041490:intron | 55.0% |
| TGCACCGAAGAGAACCGAAG+AGG | + | chr1_1:71910768-71910787 | None:intergenic | 55.0% | |
| CGGGGATACAGCAAGACTGT+TGG | + | chr1_1:71910899-71910918 | None:intergenic | 55.0% | |
| GGCGGATCAGACATTCAGGC+TGG | + | chr1_1:71904378-71904397 | None:intergenic | 60.0% | |
| ! | GGTGACTGGGGTACTCAGGT+AGG | - | chr1_1:71904409-71904428 | Msa0041490:intron | 60.0% |
| GCTCGGTCATCGAATCGGCA+GGG | - | chr1_1:71904536-71904555 | Msa0041490:intron | 60.0% | |
| CTCGGTCATCGAATCGGCAG+GGG | - | chr1_1:71904537-71904556 | Msa0041490:intron | 60.0% | |
| ! | CATCGAATCGGCAGGGGTAC+TGG | - | chr1_1:71904543-71904562 | Msa0041490:CDS | 60.0% |
| !! | CACCGAGTGGTCGGTTTGAC+CGG | - | chr1_1:71905362-71905381 | Msa0041490:CDS | 60.0% |
| !! | TCACCGGTTCACGGTTGGAC+CGG | - | chr1_1:71905460-71905479 | Msa0041490:intron | 60.0% |
| GCTGTCAGTAGTCGAGCTCC+AGG | - | chr1_1:71906666-71906685 | Msa0041490:intron | 60.0% | |
| GCCCCCTATTTGCAAGGTCG+TGG | - | chr1_1:71906739-71906758 | Msa0041490:intron | 60.0% | |
| GCGCCTTGGAATCCGTTTGG+AGG | - | chr1_1:71906886-71906905 | Msa0041490:intron | 60.0% | |
| TGCTTCGCGTATCTGGCCTC+GGG | - | chr1_1:71907828-71907847 | Msa0041490:intron | 60.0% | |
| TCTGGCCTCGGGAAGGAAAG+AGG | - | chr1_1:71907839-71907858 | Msa0041490:intron | 60.0% | |
| ATCAGGCCTTTAGGCGTGCG+GGG | - | chr1_1:71908192-71908211 | Msa0041490:intron | 60.0% | |
| ! | TCAGGTTGTTGGGTCGCTGG+AGG | - | chr1_1:71910538-71910557 | Msa0041490:intron | 60.0% |
| ! | GGCTCGGTCATCGAATCGGC+AGG | - | chr1_1:71904535-71904554 | Msa0041490:intron | 65.0% |
| CGGTTTGACCGGAAACCGGC+CGG | - | chr1_1:71905373-71905392 | Msa0041490:CDS | 65.0% | |
| ! | GGTGTGAACCGGCCGGTTTC+CGG | + | chr1_1:71905384-71905403 | None:intergenic | 65.0% |
| ! | GGAAACCGGCCGGTTCACAC+CGG | - | chr1_1:71905383-71905402 | Msa0041490:CDS | 65.0% |
| TGGAACCGGTGTGAACCGGC+CGG | + | chr1_1:71905391-71905410 | None:intergenic | 65.0% | |
| GGACCGGTCCAACCGTGAAC+CGG | + | chr1_1:71905466-71905485 | None:intergenic | 65.0% | |
| TCGCGTATCTGGCCTCGGGA+AGG | - | chr1_1:71907832-71907851 | Msa0041490:intron | 65.0% | |
| AAGCCACCCCGCACGCCTAA+AGG | + | chr1_1:71908201-71908220 | None:intergenic | 65.0% | |
| AGGGGAGCGGGACAGATCTG+GGG | + | chr1_1:71909484-71909503 | None:intergenic | 65.0% | |
| GAGGGGAGCGGGACAGATCT+GGG | + | chr1_1:71909485-71909504 | None:intergenic | 65.0% | |
| AGAGGGGAGCGGGACAGATC+TGG | + | chr1_1:71909486-71909505 | None:intergenic | 65.0% | |
| TCGTGCTCGGTTGCGGGTCC+TGG | - | chr1_1:71904025-71904044 | Msa0041490:intron | 70.0% | |
| !! | CGGCAGGGGTACTGGGTCAC+TGG | - | chr1_1:71904551-71904570 | Msa0041490:CDS | 70.0% |
| CACGGTTGGACCGGTCCGAC+CGG | - | chr1_1:71905469-71905488 | Msa0041490:intron | 70.0% | |
| AGGCCTTTAGGCGTGCGGGG+TGG | - | chr1_1:71908195-71908214 | Msa0041490:intron | 70.0% | |
| GCGTGCGGGGTGGCTTCCAA+AGG | - | chr1_1:71908205-71908224 | Msa0041490:intron | 70.0% | |
| GGGGAGCGGGACAGATCTGG+GGG | + | chr1_1:71909483-71909502 | None:intergenic | 70.0% | |
| GTTGGACCGGTCCGACCGGC+CGG | - | chr1_1:71905473-71905492 | Msa0041490:intron | 75.0% | |
| CAAACCCGGACCGGACCGGC+CGG | + | chr1_1:71905491-71905510 | None:intergenic | 75.0% | |
| ! | ACCGGTCCGACCGGCCGGTC+CGG | - | chr1_1:71905478-71905497 | Msa0041490:intron | 80.0% |
| ! | ACCGGACCGGCCGGTCGGAC+CGG | + | chr1_1:71905482-71905501 | None:intergenic | 80.0% |
| ! | TCCGACCGGCCGGTCCGGTC+CGG | - | chr1_1:71905483-71905502 | Msa0041490:intron | 80.0% |
| ! | CCCGGACCGGACCGGCCGGT+CGG | + | chr1_1:71905487-71905506 | None:intergenic | 85.0% |
| ! | CCGACCGGCCGGTCCGGTCC+GGG | - | chr1_1:71905484-71905503 | Msa0041490:intron | 85.0% |
| ! | GCGGGCGTGCATGCGCGCGC+TGG | - | chr1_1:71910268-71910287 | Msa0041490:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 71902933 | 71911015 | 71902933 | ID=Msa0041490;Name=Msa0041490 |
| chr1_1 | mRNA | 71902933 | 71911015 | 71902933 | ID=Msa0041490-mRNA-1;Parent=Msa0041490;Name=Msa0041490-mRNA-1;_AED=0.20;_eAED=0.20;_QI=113|0.88|0.94|0.94|1|1|18|363|608 |
| chr1_1 | exon | 71902933 | 71903406 | 71902933 | ID=Msa0041490-mRNA-1:exon:23899;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71903495 | 71903596 | 71903495 | ID=Msa0041490-mRNA-1:exon:23898;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71903875 | 71903943 | 71903875 | ID=Msa0041490-mRNA-1:exon:23897;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71904185 | 71904274 | 71904185 | ID=Msa0041490-mRNA-1:exon:23896;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71904540 | 71904609 | 71904540 | ID=Msa0041490-mRNA-1:exon:23895;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71905336 | 71905405 | 71905336 | ID=Msa0041490-mRNA-1:exon:23894;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71905565 | 71905751 | 71905565 | ID=Msa0041490-mRNA-1:exon:23893;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71905840 | 71905924 | 71905840 | ID=Msa0041490-mRNA-1:exon:23892;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71906398 | 71906576 | 71906398 | ID=Msa0041490-mRNA-1:exon:23891;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71907035 | 71907142 | 71907035 | ID=Msa0041490-mRNA-1:exon:23890;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71907261 | 71907344 | 71907261 | ID=Msa0041490-mRNA-1:exon:23889;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71907934 | 71908014 | 71907934 | ID=Msa0041490-mRNA-1:exon:23888;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71908574 | 71908609 | 71908574 | ID=Msa0041490-mRNA-1:exon:23887;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71909522 | 71909740 | 71909522 | ID=Msa0041490-mRNA-1:exon:23886;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71909861 | 71909962 | 71909861 | ID=Msa0041490-mRNA-1:exon:23885;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71910060 | 71910135 | 71910060 | ID=Msa0041490-mRNA-1:exon:23884;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71910649 | 71910797 | 71910649 | ID=Msa0041490-mRNA-1:exon:23883;Parent=Msa0041490-mRNA-1 |
| chr1_1 | exon | 71910894 | 71911015 | 71910894 | ID=Msa0041490-mRNA-1:exon:23882;Parent=Msa0041490-mRNA-1 |
| chr1_1 | five_prime_UTR | 71910903 | 71911015 | 71910903 | ID=Msa0041490-mRNA-1:five_prime_utr;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71910894 | 71910902 | 71910894 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71910649 | 71910797 | 71910649 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71910060 | 71910135 | 71910060 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71909861 | 71909962 | 71909861 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71909522 | 71909740 | 71909522 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71908574 | 71908609 | 71908574 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71907934 | 71908014 | 71907934 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71907261 | 71907344 | 71907261 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71907035 | 71907142 | 71907035 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71906398 | 71906576 | 71906398 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71905840 | 71905924 | 71905840 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71905565 | 71905751 | 71905565 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71905336 | 71905405 | 71905336 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71904540 | 71904609 | 71904540 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71904185 | 71904274 | 71904185 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71903875 | 71903943 | 71903875 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71903495 | 71903596 | 71903495 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | CDS | 71903296 | 71903406 | 71903296 | ID=Msa0041490-mRNA-1:cds;Parent=Msa0041490-mRNA-1 |
| chr1_1 | three_prime_UTR | 71902933 | 71903295 | 71902933 | ID=Msa0041490-mRNA-1:three_prime_utr;Parent=Msa0041490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
