Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0282490 | XP_013463348.1 | 98.058 | 412 | 2 | 1 | 1 | 412 | 1 | 406 | 0.0 | 829 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0282490 | sp|Q5VNM3|IF43A_ORYSJ | 85.819 | 409 | 52 | 1 | 4 | 412 | 2 | 404 | 0.0 | 739 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0282490 | A0A072V6Z3 | 98.058 | 412 | 2 | 1 | 1 | 412 | 1 | 406 | 0.0 | 829 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0282490 | Msa0719500 | 0.800006 | 1.764671e-48 | -8.615850e-47 |
Msa0282490 | Msa0931450 | 0.807095 | 5.974614e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0282490 | MtrunA17_Chr2g0297261 | 98.058 | 412 | 2 | 1 | 1 | 412 | 1 | 406 | 0.0 | 829 |
Msa0282490 | MtrunA17_Chr2g0299681 | 64.908 | 379 | 127 | 1 | 34 | 412 | 41 | 413 | 0.0 | 518 |
Msa0282490 | MtrunA17_Chr2g0329931 | 63.588 | 379 | 132 | 1 | 34 | 412 | 41 | 413 | 0.0 | 511 |
Msa0282490 | MtrunA17_Chr8g0342861 | 63.061 | 379 | 134 | 1 | 34 | 412 | 41 | 413 | 1.55e-180 | 509 |
Msa0282490 | MtrunA17_Chr4g0070981 | 63.852 | 379 | 131 | 1 | 34 | 412 | 41 | 413 | 1.12e-179 | 506 |
Msa0282490 | MtrunA17_Chr1g0169331 | 42.569 | 397 | 185 | 6 | 52 | 412 | 9 | 398 | 3.25e-103 | 311 |
Msa0282490 | MtrunA17_Chr8g0342851 | 43.466 | 352 | 163 | 5 | 63 | 412 | 2 | 319 | 7.02e-92 | 280 |
Msa0282490 | MtrunA17_Chr7g0247191 | 38.743 | 382 | 224 | 4 | 26 | 405 | 140 | 513 | 3.38e-91 | 285 |
Msa0282490 | MtrunA17_Chr7g0247181 | 38.220 | 382 | 226 | 4 | 26 | 405 | 130 | 503 | 8.66e-91 | 283 |
Msa0282490 | MtrunA17_Chr7g0247221 | 38.220 | 382 | 226 | 4 | 26 | 405 | 133 | 506 | 1.22e-90 | 283 |
Msa0282490 | MtrunA17_Chr4g0003441 | 35.859 | 396 | 234 | 10 | 25 | 408 | 93 | 480 | 7.30e-71 | 231 |
Msa0282490 | MtrunA17_Chr2g0330401 | 32.458 | 419 | 254 | 6 | 1 | 404 | 69 | 473 | 3.44e-70 | 229 |
Msa0282490 | MtrunA17_Chr1g0179761 | 34.750 | 400 | 225 | 11 | 34 | 404 | 80 | 472 | 5.87e-64 | 213 |
Msa0282490 | MtrunA17_Chr5g0442191 | 30.637 | 408 | 264 | 7 | 13 | 410 | 58 | 456 | 1.21e-63 | 214 |
Msa0282490 | MtrunA17_Chr1g0149251 | 36.176 | 340 | 203 | 8 | 72 | 405 | 2 | 333 | 2.08e-63 | 207 |
Msa0282490 | MtrunA17_Chr3g0107851 | 32.895 | 380 | 231 | 7 | 32 | 395 | 115 | 486 | 6.35e-62 | 209 |
Msa0282490 | MtrunA17_Chr3g0121351 | 31.971 | 416 | 246 | 8 | 17 | 405 | 126 | 531 | 1.31e-61 | 209 |
Msa0282490 | MtrunA17_Chr3g0095031 | 32.095 | 377 | 239 | 5 | 37 | 405 | 93 | 460 | 3.50e-61 | 207 |
Msa0282490 | MtrunA17_Chr2g0293631 | 33.333 | 366 | 231 | 6 | 34 | 393 | 496 | 854 | 8.13e-60 | 210 |
Msa0282490 | MtrunA17_Chr7g0270131 | 32.873 | 362 | 226 | 6 | 30 | 382 | 228 | 581 | 8.21e-60 | 207 |
Msa0282490 | MtrunA17_Chr6g0483491 | 29.948 | 384 | 253 | 5 | 30 | 407 | 6 | 379 | 1.37e-58 | 197 |
Msa0282490 | MtrunA17_Chr7g0236841 | 29.948 | 384 | 253 | 5 | 30 | 407 | 6 | 379 | 1.62e-58 | 197 |
Msa0282490 | MtrunA17_Chr4g0076491 | 29.177 | 401 | 252 | 5 | 20 | 395 | 273 | 666 | 5.97e-58 | 201 |
Msa0282490 | MtrunA17_Chr4g0063551 | 32.987 | 385 | 223 | 7 | 35 | 393 | 141 | 516 | 1.86e-57 | 199 |
Msa0282490 | MtrunA17_Chr7g0271121 | 35.530 | 349 | 202 | 9 | 59 | 395 | 131 | 468 | 1.24e-56 | 198 |
Msa0282490 | MtrunA17_Chr6g0449741 | 28.434 | 415 | 263 | 6 | 20 | 409 | 235 | 640 | 1.32e-56 | 197 |
Msa0282490 | MtrunA17_Chr6g0449911 | 31.620 | 389 | 240 | 9 | 32 | 404 | 163 | 541 | 2.24e-56 | 197 |
Msa0282490 | MtrunA17_Chr1g0193491 | 32.865 | 356 | 215 | 7 | 37 | 379 | 117 | 461 | 4.19e-56 | 195 |
Msa0282490 | MtrunA17_Chr1g0176041 | 30.508 | 413 | 255 | 9 | 17 | 405 | 135 | 539 | 7.03e-56 | 194 |
Msa0282490 | MtrunA17_Chr4g0040761 | 30.319 | 376 | 250 | 5 | 35 | 405 | 20 | 388 | 8.11e-54 | 191 |
Msa0282490 | MtrunA17_Chr1g0200181 | 30.730 | 397 | 250 | 8 | 32 | 412 | 143 | 530 | 2.77e-52 | 184 |
Msa0282490 | MtrunA17_Chr2g0277821 | 31.452 | 372 | 241 | 3 | 30 | 393 | 500 | 865 | 2.81e-52 | 188 |
Msa0282490 | MtrunA17_Chr1g0157691 | 29.899 | 398 | 254 | 8 | 31 | 412 | 144 | 532 | 1.06e-51 | 182 |
Msa0282490 | MtrunA17_Chr5g0409981 | 32.033 | 359 | 224 | 5 | 35 | 381 | 105 | 455 | 4.66e-51 | 179 |
Msa0282490 | MtrunA17_Chr4g0058591 | 33.129 | 326 | 212 | 2 | 17 | 336 | 185 | 510 | 6.48e-51 | 179 |
Msa0282490 | MtrunA17_Chr7g0263771 | 31.443 | 388 | 248 | 6 | 32 | 411 | 127 | 504 | 1.16e-50 | 180 |
Msa0282490 | MtrunA17_Chr2g0310581 | 29.551 | 379 | 248 | 5 | 33 | 402 | 52 | 420 | 2.34e-49 | 174 |
Msa0282490 | MtrunA17_Chr3g0098121 | 30.239 | 377 | 245 | 7 | 34 | 401 | 152 | 519 | 4.22e-47 | 172 |
Msa0282490 | MtrunA17_Chr6g0461751 | 28.947 | 380 | 232 | 8 | 34 | 393 | 140 | 501 | 7.54e-46 | 166 |
Msa0282490 | MtrunA17_Chr2g0309551 | 26.185 | 443 | 253 | 9 | 31 | 412 | 106 | 535 | 2.00e-42 | 156 |
Msa0282490 | MtrunA17_Chr2g0300291 | 28.424 | 387 | 263 | 7 | 23 | 401 | 129 | 509 | 4.34e-42 | 157 |
Msa0282490 | MtrunA17_Chr4g0062301 | 28.219 | 365 | 236 | 10 | 46 | 395 | 109 | 462 | 3.18e-39 | 148 |
Msa0282490 | MtrunA17_Chr3g0114081 | 27.838 | 370 | 233 | 8 | 40 | 382 | 22 | 384 | 4.20e-39 | 147 |
Msa0282490 | MtrunA17_Chr8g0386451 | 26.698 | 427 | 258 | 13 | 10 | 406 | 264 | 665 | 4.28e-39 | 149 |
Msa0282490 | MtrunA17_Chr2g0307471 | 26.984 | 378 | 251 | 9 | 28 | 391 | 85 | 451 | 8.98e-39 | 146 |
Msa0282490 | MtrunA17_Chr6g0466611 | 26.992 | 389 | 250 | 8 | 31 | 395 | 139 | 517 | 2.35e-38 | 147 |
Msa0282490 | MtrunA17_Chr8g0347161 | 27.068 | 399 | 248 | 8 | 35 | 409 | 103 | 482 | 3.45e-38 | 145 |
Msa0282490 | MtrunA17_Chr8g0347171 | 27.295 | 403 | 242 | 10 | 35 | 409 | 161 | 540 | 5.32e-38 | 145 |
Msa0282490 | MtrunA17_Chr8g0347151 | 26.065 | 399 | 246 | 8 | 35 | 406 | 202 | 578 | 1.66e-37 | 144 |
Msa0282490 | MtrunA17_Chr6g0475251 | 29.759 | 373 | 220 | 10 | 59 | 404 | 128 | 485 | 9.17e-37 | 142 |
Msa0282490 | MtrunA17_Chr5g0443991 | 30.792 | 341 | 209 | 9 | 57 | 382 | 99 | 427 | 3.20e-35 | 137 |
Msa0282490 | MtrunA17_Chr4g0034411 | 27.865 | 384 | 247 | 9 | 31 | 394 | 65 | 438 | 5.38e-35 | 137 |
Msa0282490 | MtrunA17_Chr1g0192021 | 24.890 | 454 | 269 | 11 | 14 | 406 | 6 | 448 | 1.25e-34 | 135 |
Msa0282490 | MtrunA17_Chr1g0204391 | 28.302 | 371 | 225 | 7 | 40 | 379 | 50 | 410 | 1.71e-34 | 134 |
Msa0282490 | MtrunA17_Chr7g0236831 | 25.236 | 424 | 235 | 10 | 34 | 382 | 163 | 579 | 2.12e-34 | 135 |
Msa0282490 | MtrunA17_Chr4g0025141 | 33.803 | 213 | 120 | 5 | 207 | 404 | 14 | 220 | 3.83e-31 | 119 |
Msa0282490 | MtrunA17_Chr3g0137901 | 36.527 | 167 | 98 | 3 | 240 | 405 | 10 | 169 | 9.95e-31 | 116 |
Msa0282490 | MtrunA17_Chr3g0145781 | 25.854 | 410 | 259 | 11 | 17 | 393 | 121 | 518 | 5.33e-26 | 110 |
Msa0282490 | MtrunA17_Chr4g0025131 | 35.404 | 161 | 101 | 2 | 33 | 190 | 55 | 215 | 7.74e-25 | 103 |
Msa0282490 | MtrunA17_Chr4g0004301 | 23.747 | 459 | 242 | 14 | 15 | 393 | 21 | 451 | 6.12e-22 | 97.8 |
Msa0282490 | MtrunA17_Chr4g0039471 | 27.919 | 197 | 139 | 1 | 34 | 227 | 223 | 419 | 2.59e-21 | 95.1 |
Msa0282490 | MtrunA17_Chr5g0434301 | 23.529 | 459 | 243 | 14 | 15 | 393 | 21 | 451 | 3.92e-21 | 95.5 |
Msa0282490 | MtrunA17_Chr4g0074521 | 26.273 | 373 | 215 | 14 | 40 | 371 | 88 | 441 | 7.79e-21 | 94.4 |
Msa0282490 | MtrunA17_Chr5g0429221 | 21.260 | 381 | 278 | 8 | 34 | 405 | 3 | 370 | 1.67e-20 | 92.8 |
Msa0282490 | MtrunA17_Chr3g0137891 | 35.583 | 163 | 100 | 4 | 72 | 230 | 2 | 163 | 2.18e-20 | 89.4 |
Msa0282490 | MtrunA17_Chr4g0062321 | 27.027 | 222 | 157 | 4 | 136 | 353 | 25 | 245 | 2.21e-20 | 89.7 |
Msa0282490 | MtrunA17_Chr8g0349951 | 33.094 | 139 | 92 | 1 | 30 | 167 | 6 | 144 | 1.59e-19 | 85.1 |
Msa0282490 | MtrunA17_Chr4g0025101 | 29.958 | 237 | 96 | 8 | 191 | 404 | 7 | 196 | 1.62e-19 | 86.7 |
Msa0282490 | MtrunA17_Chr2g0301281 | 25.769 | 260 | 165 | 7 | 3 | 234 | 9 | 268 | 4.21e-17 | 83.6 |
Msa0282490 | MtrunA17_Chr2g0301281 | 33.333 | 105 | 63 | 2 | 302 | 406 | 388 | 485 | 3.27e-14 | 74.3 |
Msa0282490 | MtrunA17_Chr4g0029191 | 26.471 | 238 | 148 | 6 | 24 | 234 | 34 | 271 | 7.13e-17 | 82.8 |
Msa0282490 | MtrunA17_Chr4g0029191 | 32.110 | 109 | 68 | 1 | 302 | 410 | 391 | 493 | 9.42e-14 | 73.2 |
Msa0282490 | MtrunA17_Chr5g0402301 | 25.521 | 192 | 113 | 5 | 247 | 412 | 26 | 213 | 6.35e-13 | 67.8 |
Msa0282490 | MtrunA17_Chr0c30g0494091 | 27.273 | 209 | 129 | 7 | 40 | 233 | 88 | 288 | 2.00e-12 | 68.2 |
Msa0282490 | MtrunA17_Chr1g0155201 | 24.715 | 263 | 164 | 10 | 153 | 404 | 13 | 252 | 3.86e-12 | 67.0 |
Msa0282490 | MtrunA17_Chr8g0377041 | 28.676 | 136 | 89 | 2 | 272 | 407 | 492 | 619 | 3.21e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0282490 | AT3G19760.1 | 85.024 | 414 | 54 | 2 | 1 | 412 | 1 | 408 | 0.0 | 724 |
Msa0282490 | AT1G51380.1 | 72.589 | 394 | 99 | 2 | 19 | 412 | 8 | 392 | 0.0 | 602 |
Msa0282490 | AT3G13920.3 | 64.644 | 379 | 128 | 1 | 34 | 412 | 30 | 402 | 0.0 | 516 |
Msa0282490 | AT3G13920.1 | 64.644 | 379 | 128 | 1 | 34 | 412 | 40 | 412 | 0.0 | 516 |
Msa0282490 | AT1G54270.1 | 63.852 | 379 | 131 | 1 | 34 | 412 | 40 | 412 | 0.0 | 510 |
Msa0282490 | AT1G72730.1 | 63.325 | 379 | 133 | 1 | 34 | 412 | 42 | 414 | 5.27e-179 | 505 |
Msa0282490 | AT3G13920.4 | 63.588 | 379 | 127 | 2 | 34 | 412 | 40 | 407 | 2.27e-177 | 501 |
Msa0282490 | AT1G54270.2 | 62.797 | 379 | 130 | 2 | 34 | 412 | 40 | 407 | 5.79e-175 | 494 |
Msa0282490 | AT3G13920.2 | 65.826 | 357 | 116 | 1 | 34 | 390 | 40 | 390 | 5.62e-173 | 490 |
Msa0282490 | AT3G13920.5 | 65.826 | 357 | 116 | 1 | 34 | 390 | 44 | 394 | 8.68e-173 | 489 |
Msa0282490 | AT1G51380.2 | 74.906 | 267 | 67 | 0 | 19 | 285 | 8 | 274 | 6.47e-151 | 429 |
Msa0282490 | AT1G51380.4 | 75.221 | 226 | 56 | 0 | 19 | 244 | 8 | 233 | 8.73e-124 | 360 |
Msa0282490 | AT1G51380.3 | 75.221 | 226 | 56 | 0 | 19 | 244 | 8 | 233 | 1.51e-123 | 360 |
Msa0282490 | AT4G00660.1 | 38.560 | 389 | 229 | 4 | 26 | 412 | 122 | 502 | 6.95e-93 | 289 |
Msa0282490 | AT4G00660.2 | 38.560 | 389 | 229 | 4 | 26 | 412 | 122 | 502 | 6.95e-93 | 289 |
Msa0282490 | AT3G61240.2 | 36.802 | 394 | 240 | 4 | 20 | 412 | 110 | 495 | 6.04e-90 | 281 |
Msa0282490 | AT3G61240.1 | 36.802 | 394 | 240 | 4 | 20 | 412 | 110 | 495 | 6.04e-90 | 281 |
Msa0282490 | AT2G45810.1 | 37.173 | 382 | 230 | 4 | 26 | 405 | 145 | 518 | 1.36e-86 | 273 |
Msa0282490 | AT5G11170.1 | 35.677 | 384 | 232 | 9 | 28 | 405 | 42 | 416 | 2.17e-71 | 231 |
Msa0282490 | AT5G11200.1 | 35.677 | 384 | 232 | 9 | 28 | 405 | 42 | 416 | 2.17e-71 | 231 |
Msa0282490 | AT3G53110.1 | 34.961 | 389 | 228 | 9 | 35 | 404 | 93 | 475 | 4.71e-71 | 232 |
Msa0282490 | AT1G55150.1 | 33.871 | 372 | 230 | 4 | 30 | 393 | 96 | 459 | 1.96e-70 | 230 |
Msa0282490 | AT1G55150.2 | 33.871 | 372 | 230 | 4 | 30 | 393 | 121 | 484 | 3.01e-70 | 230 |
Msa0282490 | AT5G63120.2 | 35.171 | 381 | 233 | 5 | 20 | 393 | 152 | 525 | 7.40e-69 | 228 |
Msa0282490 | AT3G01540.4 | 36.458 | 384 | 224 | 7 | 34 | 404 | 159 | 535 | 3.54e-67 | 224 |
Msa0282490 | AT3G01540.2 | 36.458 | 384 | 224 | 7 | 34 | 404 | 159 | 535 | 3.54e-67 | 224 |
Msa0282490 | AT3G01540.3 | 36.458 | 384 | 224 | 7 | 34 | 404 | 159 | 535 | 3.54e-67 | 224 |
Msa0282490 | AT3G01540.1 | 36.458 | 384 | 224 | 7 | 34 | 404 | 159 | 535 | 3.86e-67 | 224 |
Msa0282490 | AT5G14610.2 | 35.156 | 384 | 229 | 7 | 34 | 404 | 162 | 538 | 1.97e-65 | 221 |
Msa0282490 | AT5G14610.6 | 35.156 | 384 | 229 | 7 | 34 | 404 | 162 | 538 | 2.04e-65 | 221 |
Msa0282490 | AT5G14610.5 | 35.156 | 384 | 229 | 7 | 34 | 404 | 170 | 546 | 2.34e-65 | 221 |
Msa0282490 | AT3G06480.1 | 34.715 | 386 | 235 | 6 | 34 | 411 | 436 | 812 | 1.64e-63 | 221 |
Msa0282490 | AT5G11200.3 | 32.235 | 425 | 232 | 10 | 28 | 405 | 42 | 457 | 3.81e-63 | 210 |
Msa0282490 | AT3G22330.1 | 31.888 | 392 | 226 | 9 | 34 | 405 | 105 | 475 | 4.04e-63 | 214 |
Msa0282490 | AT3G22310.2 | 31.759 | 381 | 241 | 7 | 34 | 405 | 117 | 487 | 4.11e-63 | 213 |
Msa0282490 | AT3G22310.1 | 31.759 | 381 | 241 | 7 | 34 | 405 | 117 | 487 | 5.43e-63 | 213 |
Msa0282490 | AT5G11170.2 | 35.588 | 340 | 205 | 8 | 72 | 405 | 2 | 333 | 9.58e-62 | 203 |
Msa0282490 | AT5G14610.7 | 34.595 | 370 | 222 | 7 | 48 | 404 | 45 | 407 | 4.35e-61 | 206 |
Msa0282490 | AT5G14610.3 | 34.595 | 370 | 222 | 7 | 48 | 404 | 45 | 407 | 4.35e-61 | 206 |
Msa0282490 | AT2G33730.1 | 30.123 | 405 | 251 | 4 | 30 | 409 | 310 | 707 | 4.82e-60 | 207 |
Msa0282490 | AT2G47330.1 | 30.935 | 417 | 257 | 8 | 15 | 411 | 202 | 607 | 5.62e-60 | 208 |
Msa0282490 | AT5G14610.1 | 34.677 | 372 | 223 | 7 | 46 | 404 | 242 | 606 | 8.59e-60 | 207 |
Msa0282490 | AT3G58510.1 | 31.463 | 410 | 253 | 8 | 17 | 405 | 133 | 535 | 1.78e-58 | 201 |
Msa0282490 | AT3G58510.3 | 31.463 | 410 | 253 | 8 | 17 | 405 | 133 | 535 | 1.78e-58 | 201 |
Msa0282490 | AT3G58510.2 | 31.463 | 410 | 253 | 8 | 17 | 405 | 133 | 535 | 1.78e-58 | 201 |
Msa0282490 | AT2G42520.2 | 31.894 | 417 | 244 | 10 | 17 | 405 | 141 | 545 | 2.27e-58 | 201 |
Msa0282490 | AT2G42520.1 | 31.894 | 417 | 244 | 10 | 17 | 405 | 141 | 545 | 2.27e-58 | 201 |
Msa0282490 | AT2G42520.3 | 31.894 | 417 | 244 | 10 | 17 | 405 | 141 | 545 | 2.27e-58 | 201 |
Msa0282490 | AT5G26742.1 | 34.417 | 369 | 216 | 9 | 59 | 412 | 128 | 485 | 3.18e-58 | 203 |
Msa0282490 | AT5G26742.2 | 34.417 | 369 | 216 | 9 | 59 | 412 | 128 | 485 | 3.21e-58 | 203 |
Msa0282490 | AT5G26742.3 | 34.877 | 367 | 212 | 10 | 62 | 412 | 37 | 392 | 1.40e-57 | 200 |
Msa0282490 | AT5G60990.1 | 30.591 | 389 | 246 | 6 | 32 | 405 | 8 | 387 | 5.00e-56 | 191 |
Msa0282490 | AT3G58570.1 | 30.935 | 417 | 248 | 9 | 17 | 405 | 128 | 532 | 1.20e-55 | 194 |
Msa0282490 | AT3G09720.2 | 32.821 | 390 | 240 | 7 | 32 | 411 | 136 | 513 | 1.57e-55 | 192 |
Msa0282490 | AT3G09720.1 | 32.821 | 390 | 240 | 7 | 32 | 411 | 136 | 513 | 1.57e-55 | 192 |
Msa0282490 | AT1G77030.1 | 30.952 | 378 | 245 | 6 | 35 | 405 | 30 | 398 | 4.76e-55 | 195 |
Msa0282490 | AT1G20920.2 | 31.903 | 373 | 238 | 6 | 30 | 393 | 188 | 553 | 1.84e-54 | 193 |
Msa0282490 | AT4G33370.1 | 31.313 | 396 | 247 | 8 | 32 | 411 | 96 | 482 | 5.25e-53 | 185 |
Msa0282490 | AT1G20920.4 | 31.347 | 386 | 247 | 7 | 30 | 406 | 526 | 902 | 5.65e-53 | 191 |
Msa0282490 | AT1G20920.6 | 31.347 | 386 | 247 | 7 | 30 | 406 | 526 | 902 | 5.65e-53 | 191 |
Msa0282490 | AT1G20920.3 | 31.347 | 386 | 247 | 7 | 30 | 406 | 526 | 902 | 5.65e-53 | 191 |
Msa0282490 | AT1G20920.7 | 31.347 | 386 | 247 | 7 | 30 | 406 | 526 | 902 | 5.65e-53 | 191 |
Msa0282490 | AT1G20920.5 | 31.347 | 386 | 247 | 7 | 30 | 406 | 526 | 902 | 5.65e-53 | 191 |
Msa0282490 | AT1G20920.1 | 31.347 | 386 | 247 | 7 | 30 | 406 | 526 | 902 | 5.65e-53 | 191 |
Msa0282490 | AT5G51280.1 | 31.566 | 396 | 246 | 8 | 32 | 411 | 145 | 531 | 1.45e-51 | 182 |
Msa0282490 | AT5G14610.4 | 33.436 | 326 | 210 | 5 | 34 | 353 | 170 | 494 | 3.26e-51 | 179 |
Msa0282490 | AT5G63120.1 | 33.333 | 324 | 208 | 4 | 20 | 336 | 152 | 474 | 1.25e-50 | 177 |
Msa0282490 | AT1G16280.1 | 30.829 | 386 | 240 | 10 | 34 | 407 | 59 | 429 | 1.33e-50 | 177 |
Msa0282490 | AT5G63120.3 | 33.333 | 324 | 208 | 4 | 20 | 336 | 152 | 474 | 1.36e-50 | 177 |
Msa0282490 | AT5G63120.4 | 33.333 | 324 | 208 | 4 | 20 | 336 | 152 | 474 | 1.36e-50 | 177 |
Msa0282490 | AT5G63120.5 | 33.333 | 324 | 208 | 4 | 20 | 336 | 152 | 474 | 1.36e-50 | 177 |
Msa0282490 | AT3G02065.3 | 28.571 | 392 | 255 | 6 | 34 | 411 | 111 | 491 | 1.23e-49 | 176 |
Msa0282490 | AT3G02065.2 | 28.571 | 392 | 255 | 6 | 34 | 411 | 111 | 491 | 1.23e-49 | 176 |
Msa0282490 | AT3G06480.2 | 34.395 | 314 | 195 | 5 | 34 | 339 | 436 | 746 | 4.38e-49 | 178 |
Msa0282490 | AT1G31970.1 | 30.769 | 364 | 231 | 5 | 31 | 381 | 114 | 469 | 6.17e-49 | 174 |
Msa0282490 | AT1G28180.1 | 32.558 | 344 | 211 | 8 | 63 | 395 | 2 | 335 | 1.92e-48 | 169 |
Msa0282490 | AT4G16630.1 | 30.829 | 386 | 254 | 5 | 23 | 401 | 156 | 535 | 1.34e-46 | 171 |
Msa0282490 | AT1G12770.2 | 27.014 | 422 | 240 | 7 | 34 | 395 | 111 | 524 | 4.20e-46 | 167 |
Msa0282490 | AT1G12770.1 | 27.014 | 422 | 240 | 7 | 34 | 395 | 111 | 524 | 4.20e-46 | 167 |
Msa0282490 | AT3G02065.1 | 28.571 | 364 | 235 | 6 | 62 | 411 | 2 | 354 | 3.12e-45 | 160 |
Msa0282490 | AT3G09620.2 | 30.130 | 385 | 224 | 9 | 30 | 406 | 394 | 741 | 4.53e-44 | 164 |
Msa0282490 | AT3G09620.1 | 30.130 | 385 | 224 | 9 | 30 | 406 | 393 | 740 | 4.83e-44 | 164 |
Msa0282490 | AT5G63630.1 | 27.340 | 406 | 242 | 10 | 35 | 411 | 56 | 437 | 1.38e-43 | 159 |
Msa0282490 | AT1G71370.1 | 29.058 | 382 | 244 | 10 | 30 | 391 | 11 | 385 | 1.56e-43 | 160 |
Msa0282490 | AT3G18600.1 | 28.686 | 373 | 251 | 7 | 27 | 391 | 83 | 448 | 2.69e-42 | 157 |
Msa0282490 | AT5G63630.2 | 27.273 | 396 | 235 | 9 | 45 | 411 | 260 | 631 | 3.87e-42 | 158 |
Msa0282490 | AT5G08620.1 | 28.079 | 406 | 239 | 11 | 35 | 411 | 82 | 463 | 6.97e-42 | 155 |
Msa0282490 | AT5G05450.1 | 28.649 | 370 | 233 | 8 | 37 | 382 | 20 | 382 | 7.09e-42 | 156 |
Msa0282490 | AT5G08610.1 | 27.586 | 406 | 241 | 9 | 35 | 411 | 384 | 765 | 3.80e-41 | 155 |
Msa0282490 | AT5G65900.1 | 28.571 | 371 | 241 | 7 | 34 | 391 | 155 | 514 | 4.05e-40 | 151 |
Msa0282490 | AT5G54910.1 | 28.989 | 376 | 247 | 10 | 31 | 395 | 69 | 435 | 5.80e-39 | 149 |
Msa0282490 | AT5G62190.1 | 29.243 | 383 | 223 | 9 | 52 | 404 | 115 | 479 | 2.05e-38 | 147 |
Msa0282490 | AT2G07750.1 | 27.778 | 414 | 243 | 12 | 24 | 406 | 366 | 754 | 3.93e-38 | 147 |
Msa0282490 | AT1G63250.1 | 26.869 | 428 | 257 | 12 | 10 | 406 | 305 | 707 | 4.06e-38 | 147 |
Msa0282490 | AT4G09730.1 | 24.760 | 416 | 271 | 9 | 8 | 395 | 87 | 488 | 2.28e-34 | 135 |
Msa0282490 | AT4G34910.1 | 26.241 | 423 | 249 | 10 | 31 | 399 | 44 | 457 | 1.34e-33 | 133 |
Msa0282490 | AT2G40700.1 | 24.353 | 464 | 264 | 12 | 28 | 410 | 25 | 482 | 8.13e-32 | 127 |
Msa0282490 | AT5G11200.2 | 32.922 | 243 | 147 | 8 | 28 | 266 | 42 | 272 | 6.42e-31 | 124 |
Msa0282490 | AT5G11200.2 | 36.158 | 177 | 104 | 4 | 231 | 405 | 306 | 475 | 6.31e-28 | 115 |
Msa0282490 | AT3G06980.1 | 26.005 | 423 | 266 | 12 | 12 | 393 | 344 | 760 | 1.60e-28 | 118 |
Msa0282490 | AT1G71280.1 | 27.245 | 323 | 195 | 8 | 40 | 349 | 24 | 319 | 4.21e-28 | 115 |
Msa0282490 | AT1G71280.2 | 27.564 | 312 | 186 | 8 | 40 | 338 | 24 | 308 | 1.29e-27 | 112 |
Msa0282490 | AT5G19210.2 | 25.373 | 402 | 249 | 13 | 40 | 404 | 83 | 470 | 4.75e-27 | 112 |
Msa0282490 | AT4G15850.1 | 23.542 | 463 | 248 | 15 | 5 | 388 | 13 | 448 | 1.22e-21 | 97.4 |
Msa0282490 | AT3G16840.2 | 25.381 | 197 | 123 | 3 | 32 | 204 | 190 | 386 | 1.90e-14 | 75.9 |
Msa0282490 | AT3G16840.2 | 27.083 | 144 | 92 | 3 | 246 | 386 | 478 | 611 | 4.61e-11 | 65.5 |
Msa0282490 | AT3G16840.1 | 25.381 | 197 | 123 | 3 | 32 | 204 | 189 | 385 | 1.95e-14 | 75.9 |
Msa0282490 | AT3G16840.1 | 27.083 | 144 | 92 | 3 | 246 | 386 | 477 | 610 | 4.99e-11 | 65.1 |
Msa0282490 | AT4G37020.1 | 23.077 | 195 | 116 | 5 | 248 | 412 | 22 | 212 | 2.33e-11 | 63.5 |
Msa0282490 | AT1G27880.1 | 22.193 | 374 | 241 | 14 | 51 | 403 | 265 | 609 | 2.38e-11 | 66.2 |
Msa0282490 | AT1G27880.2 | 21.728 | 382 | 233 | 14 | 51 | 403 | 265 | 609 | 2.56e-11 | 66.2 |
Msa0282490 | AT1G28180.2 | 31.532 | 111 | 68 | 2 | 68 | 170 | 8 | 118 | 9.26e-11 | 59.7 |
Find 122 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTAGCTTATTCGACTTTCT+AGG | 0.243882 | 2_3:-18494787 | Msa0282490:five_prime_UTR |
TGTTGCTGATCTTATATAAA+AGG | 0.262979 | 2_3:-18490795 | Msa0282490:exon |
ATGTAGAGCTCTCGATTATT+TGG | 0.280901 | 2_3:+18491137 | None:intergenic |
AAGGGAAAGAGATGCCATTA+TGG | 0.307907 | 2_3:-18491809 | Msa0282490:CDS |
AATAAGCTACGCCTTACGTT+TGG | 0.311845 | 2_3:+18494799 | None:intergenic |
TATTGATAACAACCGATGTT+TGG | 0.322422 | 2_3:-18491759 | Msa0282490:CDS |
GACTTCGATGATTGCCTTGA+CGG | 0.331628 | 2_3:-18494460 | Msa0282490:CDS |
ATTGGTCGTTCTGGACGTTT+TGG | 0.333437 | 2_3:-18491107 | Msa0282490:CDS |
GAGAAAGTTATATTGGCAAT+TGG | 0.345232 | 2_3:-18493355 | Msa0282490:CDS |
CCTTACGTTTGGGAGCTAAA+AGG | 0.346064 | 2_3:+18494810 | None:intergenic |
ATATCTCCCACCGGATCTTC+AGG | 0.347012 | 2_3:-18493002 | Msa0282490:intron |
AGAAAGTTATATTGGCAATT+GGG | 0.352858 | 2_3:-18493354 | Msa0282490:CDS |
ATAAGCTACGCCTTACGTTT+GGG | 0.353669 | 2_3:+18494800 | None:intergenic |
GGCCATCAAGTTGCTAGTTC+TGG | 0.359331 | 2_3:-18493185 | Msa0282490:intron |
ACAGACTGAGAAAGTTATAT+TGG | 0.367040 | 2_3:-18493362 | Msa0282490:CDS |
TCATTGGCATCTCATCAATC+TGG | 0.367145 | 2_3:+18490819 | None:intergenic |
TACGCTACCTCATGAAATTC+TGG | 0.380878 | 2_3:-18492316 | Msa0282490:CDS |
GGCGACAGCTTCTGTGGTTC+CGG | 0.382833 | 2_3:-18494706 | Msa0282490:CDS |
ATTGATAACAACCGATGTTT+GGG | 0.383191 | 2_3:-18491758 | Msa0282490:CDS |
ACATCCCTTCCTTGAATAAT+CGG | 0.387301 | 2_3:+18494513 | None:intergenic |
ATGGCATCTCTTTCCCTTTG+AGG | 0.391683 | 2_3:+18491814 | None:intergenic |
CACGGAGTTCATGTCGTGTC+TGG | 0.393969 | 2_3:-18493259 | Msa0282490:CDS |
ATAAGATCAGCAACATTCAT+TGG | 0.404488 | 2_3:+18490803 | None:intergenic |
AGCACGGAATTCACCCATAA+TGG | 0.405284 | 2_3:+18491795 | None:intergenic |
TACCAGAACTAGCAACTTGA+TGG | 0.419216 | 2_3:+18493183 | None:intergenic |
TCCGATTGCTTTCACGCCTT+CGG | 0.420202 | 2_3:+18494632 | None:intergenic |
CGAGATGAAGGAAGAAGGTT+TGG | 0.423696 | 2_3:+18494737 | None:intergenic |
GATTGCCTTGACGGTTTGTC+AGG | 0.429119 | 2_3:-18494451 | Msa0282490:CDS |
AGGGAAAGAGATGCCATTAT+GGG | 0.441532 | 2_3:-18491808 | Msa0282490:CDS |
CATCGGTTGTTATCAATACT+CGG | 0.443307 | 2_3:+18491764 | None:intergenic |
GATCAATTTGTAAATTGAGT+TGG | 0.445422 | 2_3:-18490583 | Msa0282490:three_prime_UTR |
CGCCATCGCCGCCGAGATGA+AGG | 0.465798 | 2_3:+18494725 | None:intergenic |
GAGGTAGCGTAGCAGAAATC+AGG | 0.468804 | 2_3:+18492328 | None:intergenic |
GTTATTGCTCAGGCGCAATC+TGG | 0.470550 | 2_3:-18494492 | Msa0282490:CDS |
TTCCTTCATCTCGGCGGCGA+TGG | 0.471432 | 2_3:-18494727 | Msa0282490:exon |
CAAGCCCATGCTTGCATTGG+AGG | 0.471982 | 2_3:-18493316 | Msa0282490:CDS |
TCGTGGCCTTGATGTACAAC+AGG | 0.473001 | 2_3:-18491734 | Msa0282490:CDS |
AGAGGAGAACATTGCGCACC+AGG | 0.473245 | 2_3:-18493207 | Msa0282490:CDS |
GAATCGCCGACGAACGGTTA+CGG | 0.475337 | 2_3:-18494682 | Msa0282490:CDS |
AATCGGAAGCTTCGAAGAGA+TGG | 0.477193 | 2_3:-18494616 | Msa0282490:CDS |
TGTGAGGCCAGTTCTCTTGT+CGG | 0.478916 | 2_3:+18493382 | None:intergenic |
CTTCGTGGAATCTACCAATA+CGG | 0.479176 | 2_3:-18494576 | Msa0282490:CDS |
TGTGTCTCCGACAAGAGAAC+TGG | 0.480029 | 2_3:-18493389 | Msa0282490:CDS |
AAGGTTTCTCAAATCCGTAT+TGG | 0.482981 | 2_3:+18494562 | None:intergenic |
AGGAAGGGATGTTATTGCTC+AGG | 0.483228 | 2_3:-18494502 | Msa0282490:CDS |
ATTCATCGGATTGGTCGTTC+TGG | 0.484590 | 2_3:-18491116 | Msa0282490:CDS |
AGTATAAATAAATTAGCAAA+AGG | 0.488694 | 2_3:-18494833 | None:intergenic |
GCTCAGGCGCAATCTGGTAC+TGG | 0.490296 | 2_3:-18494486 | Msa0282490:CDS |
TCAATTCATCACGCTTTACA+AGG | 0.494715 | 2_3:+18492256 | None:intergenic |
ACCGTTCGTCGGCGATTCGC+CGG | 0.496560 | 2_3:+18494687 | None:intergenic |
ACCGAAGGCGTGAAAGCAAT+CGG | 0.496626 | 2_3:-18494633 | Msa0282490:CDS |
TCCCCTTGGAACAGGTGGAC+TGG | 0.499263 | 2_3:-18491894 | Msa0282490:intron |
ATCGGAAGCTTCGAAGAGAT+GGG | 0.501930 | 2_3:-18494615 | Msa0282490:CDS |
ATAAAAGACGATTTGCTTCG+TGG | 0.502129 | 2_3:-18494591 | Msa0282490:CDS |
TTTCCCTCCAATGCAAGCAT+GGG | 0.504031 | 2_3:+18493312 | None:intergenic |
CATGTCGTGTCTGGAACTCC+TGG | 0.508662 | 2_3:-18493250 | Msa0282490:CDS |
TAGGAATTAGTGTTTGATTG+TGG | 0.508701 | 2_3:-18490730 | Msa0282490:three_prime_UTR |
ATACAAGCCCATGCTTGCAT+TGG | 0.509573 | 2_3:-18493319 | Msa0282490:CDS |
GAAAGTTATATTGGCAATTG+GGG | 0.511942 | 2_3:-18493353 | Msa0282490:CDS |
GTAAAGAGAACCTGAAGATC+CGG | 0.512664 | 2_3:+18492992 | None:intergenic |
GTAGCTTATTCGACTTTCTA+GGG | 0.513252 | 2_3:-18494786 | Msa0282490:five_prime_UTR |
GCTGTGGCGCCGATTATTCA+AGG | 0.516832 | 2_3:-18494522 | Msa0282490:CDS |
TTGAGGCATGTCACCGTGCA+TGG | 0.517494 | 2_3:+18491831 | None:intergenic |
ATCGAGAGCTCTACATTCAT+CGG | 0.520344 | 2_3:-18491130 | Msa0282490:CDS |
ACAACCGATGTTTGGGCTCG+TGG | 0.522556 | 2_3:-18491751 | Msa0282490:CDS |
AACTAGCAACTTGATGGCCC+TGG | 0.522591 | 2_3:+18493189 | None:intergenic |
CGCTTTACAAGGATCCTCAC+TGG | 0.522851 | 2_3:+18492267 | None:intergenic |
ATCATGTCACAGACTCGGCC+AGG | 0.526550 | 2_3:+18493232 | None:intergenic |
TTGCGGTTGAAAGGGAGGAA+TGG | 0.531108 | 2_3:-18492125 | Msa0282490:CDS |
CAAACCTTCTTCCTTCATCT+CGG | 0.532638 | 2_3:-18494736 | Msa0282490:five_prime_UTR |
TGCACGGTGACATGCCTCAA+AGG | 0.534214 | 2_3:-18491828 | Msa0282490:CDS |
GAGCTCTACATTCATCGGAT+TGG | 0.537280 | 2_3:-18491125 | Msa0282490:CDS |
CATTGGCATCTCATCAATCT+GGG | 0.539260 | 2_3:+18490820 | None:intergenic |
CTGATGAAATGTTGAGCAGA+GGG | 0.540674 | 2_3:-18493054 | Msa0282490:CDS |
TCCATTGCTTACTTTCGATG+TGG | 0.541344 | 2_3:-18490551 | Msa0282490:three_prime_UTR |
GGTTACGGCGAACGAGGACA+TGG | 0.543356 | 2_3:-18494667 | Msa0282490:CDS |
GCGTTTGTCAAATTTGTGGT+AGG | 0.543554 | 2_3:-18490749 | Msa0282490:three_prime_UTR |
TGCGATTCAACAGCGTGCTG+TGG | 0.544984 | 2_3:-18494538 | Msa0282490:CDS |
GCACGGTGACATGCCTCAAA+GGG | 0.551418 | 2_3:-18491827 | Msa0282490:CDS |
AACTTGCCTGTTGTACATCA+AGG | 0.552831 | 2_3:+18491728 | None:intergenic |
ATCGGTTGTTATCAATACTC+GGG | 0.555470 | 2_3:+18491765 | None:intergenic |
TTCACTGTTTCATCCATGCA+CGG | 0.556873 | 2_3:-18491844 | Msa0282490:CDS |
TGGCGCCGATTATTCAAGGA+AGG | 0.572845 | 2_3:-18494518 | Msa0282490:CDS |
AGAGCTCTCGATTATTTGGA+AGG | 0.575139 | 2_3:+18491141 | None:intergenic |
GCGTGATGAATTGACATTGG+AGG | 0.575652 | 2_3:-18492247 | Msa0282490:intron |
GAGTGCGTTTGTCAAATTTG+TGG | 0.580446 | 2_3:-18490753 | Msa0282490:three_prime_UTR |
GGCGATGGCGACAGCTTCTG+TGG | 0.581450 | 2_3:-18494712 | Msa0282490:exon |
CGTTCGCCGTAACCGTTCGT+CGG | 0.582245 | 2_3:+18494676 | None:intergenic |
AAGCCCATGCTTGCATTGGA+GGG | 0.587223 | 2_3:-18493315 | Msa0282490:CDS |
GAGGAGAACATTGCGCACCA+GGG | 0.595037 | 2_3:-18493206 | Msa0282490:CDS |
TCCGGCGAATCGCCGACGAA+CGG | 0.596292 | 2_3:-18494688 | Msa0282490:CDS |
GAGTCTGTGACATGATAAAG+AGG | 0.598721 | 2_3:-18493225 | Msa0282490:CDS |
GCCGCCGAGATGAAGGAAGA+AGG | 0.599724 | 2_3:+18494732 | None:intergenic |
TCCACATCGAAAGTAAGCAA+TGG | 0.606722 | 2_3:+18490550 | None:intergenic |
ATTATGGGTGAATTCCGTGC+TGG | 0.607873 | 2_3:-18491793 | Msa0282490:CDS |
GACATTAGAAAACTTGAGCA+CGG | 0.609708 | 2_3:-18493277 | Msa0282490:CDS |
GCACGCTGTTGAATCGCAGA+AGG | 0.610346 | 2_3:+18494543 | None:intergenic |
GAATATAACAGCTTGAGTAA+TGG | 0.612678 | 2_3:+18492065 | None:intergenic |
AAAGCGTGATGAATTGACAT+TGG | 0.623480 | 2_3:-18492250 | Msa0282490:CDS |
AAGAGAACCTGAAGATCCGG+TGG | 0.623806 | 2_3:+18492995 | None:intergenic |
TCTTTATCATGTCACAGACT+CGG | 0.625391 | 2_3:+18493227 | None:intergenic |
AGAAGAAACTCACTCTCTGA+CGG | 0.631263 | 2_3:+18494416 | None:intergenic |
TTATATTCTGCAACACCAAG+CGG | 0.634758 | 2_3:-18492050 | Msa0282490:CDS |
TGCATTGGAGGGAAAAGTGT+GGG | 0.639623 | 2_3:-18493304 | Msa0282490:CDS |
ATTCTGCAACACCAAGCGGA+AGG | 0.643180 | 2_3:-18492046 | Msa0282490:intron |
AACAACCTGACAAACCGTCA+AGG | 0.644356 | 2_3:+18494446 | None:intergenic |
ACGAACGGTTACGGCGAACG+AGG | 0.645748 | 2_3:-18494673 | Msa0282490:CDS |
GGCGCCGATTATTCAAGGAA+GGG | 0.657629 | 2_3:-18494517 | Msa0282490:CDS |
AGGACATGTATTCTGCTGAG+TGG | 0.663921 | 2_3:-18490775 | Msa0282490:three_prime_UTR |
GTCATCTCCAGAATTTCATG+AGG | 0.665661 | 2_3:+18492309 | None:intergenic |
TCGGAAGCTTCGAAGAGATG+GGG | 0.670150 | 2_3:-18494614 | Msa0282490:CDS |
AGAAACTCACTCTCTGACGG+AGG | 0.672890 | 2_3:+18494419 | None:intergenic |
ACCTTCTTCCTTCATCTCGG+CGG | 0.675394 | 2_3:-18494733 | Msa0282490:five_prime_UTR |
TGTGTACAGATATCTCCCAC+CGG | 0.677582 | 2_3:-18493011 | Msa0282490:CDS |
AGAGAACCTGAAGATCCGGT+GGG | 0.679640 | 2_3:+18492996 | None:intergenic |
AAGGCCACGAGCCCAAACAT+CGG | 0.689261 | 2_3:+18491747 | None:intergenic |
TATAACTTTCTCAGTCTGTG+AGG | 0.699081 | 2_3:+18493366 | None:intergenic |
ATACTCGGGTTGTTCCAGCA+CGG | 0.705926 | 2_3:+18491779 | None:intergenic |
TCTGATGAAATGTTGAGCAG+AGG | 0.713686 | 2_3:-18493055 | Msa0282490:CDS |
TTGCATTGGAGGGAAAAGTG+TGG | 0.730153 | 2_3:-18493305 | Msa0282490:CDS |
AGTTTATGACAGATCCAGTG+AGG | 0.735827 | 2_3:-18492281 | Msa0282490:CDS |
ATGGATTTCGAAACTACCGA+AGG | 0.736816 | 2_3:-18494648 | Msa0282490:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAGTTCTTTTAATTTATAAA+TGG | - | chr2_3:18491683-18491702 | Msa0282490:intron | 10.0% |
!!! | TTATTAATGTTTTCTTTATT+TGG | - | chr2_3:18492699-18492718 | Msa0282490:intron | 10.0% |
!!! | TTGTTTTATGTTAATTTGTT+TGG | - | chr2_3:18490993-18491012 | Msa0282490:intron | 15.0% |
!!! | ATATTTTTCTTTTCAAATAC+AGG | - | chr2_3:18492166-18492185 | Msa0282490:intron | 15.0% |
!!! | ACAAAAATAGTATTGAATAT+TGG | - | chr2_3:18492430-18492449 | Msa0282490:intron | 15.0% |
!! | AATTCAGATTCTTAAATATT+TGG | - | chr2_3:18493599-18493618 | Msa0282490:intron | 15.0% |
!!! | TTAGTTAATTTGTTTGGATT+TGG | - | chr2_3:18490883-18490902 | Msa0282490:CDS | 20.0% |
!!! | TTCTTGATTAGGTTTTTTTT+AGG | - | chr2_3:18490940-18490959 | Msa0282490:intron | 20.0% |
!!! | TCTTGATTAGGTTTTTTTTA+GGG | - | chr2_3:18490941-18490960 | Msa0282490:intron | 20.0% |
!!! | AATTTGTTTGGATAAACAAT+TGG | - | chr2_3:18491005-18491024 | Msa0282490:intron | 20.0% |
!! | TATAAATAGAGAGTAATTTG+AGG | - | chr2_3:18491038-18491057 | Msa0282490:intron | 20.0% |
!!! | TATCGTTTGTTATGAAAAAA+GGG | + | chr2_3:18491192-18491211 | None:intergenic | 20.0% |
!!! | TTATCGTTTGTTATGAAAAA+AGG | + | chr2_3:18491193-18491212 | None:intergenic | 20.0% |
!! | TTATGAAAATAAGCTGAAAA+CGG | - | chr2_3:18491258-18491277 | Msa0282490:intron | 20.0% |
!!! | AATTTTGTTATTTGTTGACA+GGG | - | chr2_3:18491824-18491843 | Msa0282490:CDS | 20.0% |
!! | TATATGCTTAAAACAAACTA+AGG | - | chr2_3:18492341-18492360 | Msa0282490:intron | 20.0% |
!!! | ACAAAATGTGCTATTAAATA+AGG | - | chr2_3:18492481-18492500 | Msa0282490:intron | 20.0% |
!! | CTATTAAATAAGGATATAAG+AGG | - | chr2_3:18492491-18492510 | Msa0282490:intron | 20.0% |
!! | ACTAAATCCAATTATCAAAT+GGG | + | chr2_3:18492528-18492547 | None:intergenic | 20.0% |
!!! | TATTTTTTCGTAATATAAGC+TGG | - | chr2_3:18492602-18492621 | Msa0282490:intron | 20.0% |
!! | ATAAAATGAGGTAAAATTTC+AGG | + | chr2_3:18492751-18492770 | None:intergenic | 20.0% |
!! | TTATTTCAAAACTTGATGTT+TGG | + | chr2_3:18493926-18493945 | None:intergenic | 20.0% |
!! | TCAATTAAAACTCATGTTAA+TGG | - | chr2_3:18493946-18493965 | Msa0282490:intron | 20.0% |
!! | ATTTATTTCCATGTCTTATA+TGG | - | chr2_3:18494257-18494276 | Msa0282490:intron | 20.0% |
!!! | TTATTTTAGATTATGAGAAG+TGG | - | chr2_3:18494811-18494830 | Msa0282490:five_prime_UTR | 20.0% |
!!! | GTTGTGTTAGTTAATTTGTT+TGG | - | chr2_3:18490877-18490896 | Msa0282490:CDS | 25.0% |
!!! | TGAGATTGATTTTCTTGATT+AGG | - | chr2_3:18490929-18490948 | Msa0282490:intron | 25.0% |
!!! | AGGTTTTTTTTAGGGTAATT+AGG | - | chr2_3:18490949-18490968 | Msa0282490:intron | 25.0% |
!!! | GGTTTTTTTTAGGGTAATTA+GGG | - | chr2_3:18490950-18490969 | Msa0282490:intron | 25.0% |
!!! | TTTTTGTGATATGGATTATG+TGG | - | chr2_3:18491118-18491137 | Msa0282490:CDS | 25.0% |
! | ACATTAGAGAAAGTTTAATG+AGG | - | chr2_3:18491158-18491177 | Msa0282490:CDS | 25.0% |
! | CATTAGAGAAAGTTTAATGA+GGG | - | chr2_3:18491159-18491178 | Msa0282490:CDS | 25.0% |
!! | ATAATCTGTTTTCAGCTTAT+AGG | + | chr2_3:18491242-18491261 | None:intergenic | 25.0% |
!!! | AAGACATTCTTGATTTGTTA+TGG | - | chr2_3:18491448-18491467 | Msa0282490:intron | 25.0% |
!!! | AGACATTCTTGATTTGTTAT+GGG | - | chr2_3:18491449-18491468 | Msa0282490:intron | 25.0% |
! | TAAATTGAAGTGAATGTTGT+AGG | - | chr2_3:18491572-18491591 | Msa0282490:intron | 25.0% |
!! | TATATACTACTGTTGCTATT+CGG | - | chr2_3:18491657-18491676 | Msa0282490:intron | 25.0% |
!!! | ATGTTTTTTGCTTTTTGTTC+CGG | - | chr2_3:18491713-18491732 | Msa0282490:intron | 25.0% |
!!! | CAATTTTGTTATTTGTTGAC+AGG | - | chr2_3:18491823-18491842 | Msa0282490:CDS | 25.0% |
! | AGAAAGTTATATTGGCAATT+GGG | - | chr2_3:18491895-18491914 | Msa0282490:intron | 25.0% |
!!! | ACTATTTTTGTTCATTGTCA+CGG | + | chr2_3:18492421-18492440 | None:intergenic | 25.0% |
! | CACTAAATCCAATTATCAAA+TGG | + | chr2_3:18492529-18492548 | None:intergenic | 25.0% |
! | TCAAGATCACAAAAATGAAA+TGG | + | chr2_3:18492637-18492656 | None:intergenic | 25.0% |
!! | GGTAAAATTTCAGGTAATTT+GGG | + | chr2_3:18492742-18492761 | None:intergenic | 25.0% |
!! | AGGTAAAATTTCAGGTAATT+TGG | + | chr2_3:18492743-18492762 | None:intergenic | 25.0% |
! | TTATGCTCGATTTAAATTTG+TGG | - | chr2_3:18492827-18492846 | Msa0282490:intron | 25.0% |
!! | ATTCAGAGACTACATAATTT+TGG | + | chr2_3:18492875-18492894 | None:intergenic | 25.0% |
!!! | TCATTTTTTTAATACCGTGT+AGG | - | chr2_3:18492894-18492913 | Msa0282490:intron | 25.0% |
!!! | CATTAAGCAATTTTTTGTTG+CGG | - | chr2_3:18493107-18493126 | Msa0282490:intron | 25.0% |
! | AAGGTAAAAGAAAACTATCA+AGG | - | chr2_3:18493222-18493241 | Msa0282490:CDS | 25.0% |
! | AAGTTAATATATATTCCCCT+TGG | - | chr2_3:18493341-18493360 | Msa0282490:CDS | 25.0% |
! | AATAATGATAAAATGCACAC+TGG | + | chr2_3:18493553-18493572 | None:intergenic | 25.0% |
!!! | CTGAATTCATCATATTTTAG+AGG | + | chr2_3:18493586-18493605 | None:intergenic | 25.0% |
!!! | TGCAAGTTTTATGTAAATCT+TGG | + | chr2_3:18493890-18493909 | None:intergenic | 25.0% |
!! | TTTTAATACTTCCACTGTTA+GGG | + | chr2_3:18494024-18494043 | None:intergenic | 25.0% |
!!! | ATTTTAATACTTCCACTGTT+AGG | + | chr2_3:18494025-18494044 | None:intergenic | 25.0% |
!!! | GTGGAAGTATTAAAATTAAC+CGG | - | chr2_3:18494029-18494048 | Msa0282490:intron | 25.0% |
! | CGATATACATTACTTATAGT+CGG | - | chr2_3:18494317-18494336 | Msa0282490:intron | 25.0% |
! | GATATACATTACTTATAGTC+GGG | - | chr2_3:18494318-18494337 | Msa0282490:intron | 25.0% |
! | TGTTGCTGATCTTATATAAA+AGG | - | chr2_3:18494454-18494473 | Msa0282490:CDS | 25.0% |
! | GATCAATTTGTAAATTGAGT+TGG | - | chr2_3:18494666-18494685 | Msa0282490:CDS | 25.0% |
!! | TGAGGTTGAATTTGTTGATT+AGG | - | chr2_3:18491056-18491075 | Msa0282490:intron | 30.0% |
!! | GAGGTTGAATTTGTTGATTA+GGG | - | chr2_3:18491057-18491076 | Msa0282490:intron | 30.0% |
!! | ATTTGTTGATTAGGGTTTTC+AGG | - | chr2_3:18491065-18491084 | Msa0282490:intron | 30.0% |
!! | TTTGTTGATTAGGGTTTTCA+GGG | - | chr2_3:18491066-18491085 | Msa0282490:intron | 30.0% |
!!! | TAGGGTTTTTGAGTTAGTAT+TGG | - | chr2_3:18491093-18491112 | Msa0282490:intron | 30.0% |
!!! | GTATTGGTCTTTTTGTGATA+TGG | - | chr2_3:18491109-18491128 | Msa0282490:CDS | 30.0% |
! | ACTTATTTGAGGTTATCTAC+TGG | + | chr2_3:18491345-18491364 | None:intergenic | 30.0% |
! | TGTTTGGATTGACTTATTTG+AGG | + | chr2_3:18491356-18491375 | None:intergenic | 30.0% |
TCAAATAAGTCAATCCAAAC+AGG | - | chr2_3:18491355-18491374 | Msa0282490:intron | 30.0% | |
!! | GCATTTGGTTTGTTAATGAA+TGG | - | chr2_3:18491486-18491505 | Msa0282490:intron | 30.0% |
CAGATGATTAAAAACATCTC+CGG | + | chr2_3:18491735-18491754 | None:intergenic | 30.0% | |
ACAGACTGAGAAAGTTATAT+TGG | - | chr2_3:18491887-18491906 | Msa0282490:intron | 30.0% | |
GAGAAAGTTATATTGGCAAT+TGG | - | chr2_3:18491894-18491913 | Msa0282490:intron | 30.0% | |
GAAAGTTATATTGGCAATTG+GGG | - | chr2_3:18491896-18491915 | Msa0282490:intron | 30.0% | |
AAACACAATGACAAAGATGA+GGG | + | chr2_3:18492290-18492309 | None:intergenic | 30.0% | |
AAAACACAATGACAAAGATG+AGG | + | chr2_3:18492291-18492310 | None:intergenic | 30.0% | |
TTAAAACAAACTAAGGTGAC+AGG | - | chr2_3:18492348-18492367 | Msa0282490:intron | 30.0% | |
TAAAACAAACTAAGGTGACA+GGG | - | chr2_3:18492349-18492368 | Msa0282490:intron | 30.0% | |
!!! | AGGGTTAGTTAGTTTTTTGT+AGG | - | chr2_3:18492368-18492387 | Msa0282490:intron | 30.0% |
! | ATAGCACATTTTGTCTGAAT+TGG | + | chr2_3:18492475-18492494 | None:intergenic | 30.0% |
! | TAGTGTTCCCATTTGATAAT+TGG | - | chr2_3:18492518-18492537 | Msa0282490:intron | 30.0% |
GAAAAAATAAGCAGCTACAT+TGG | + | chr2_3:18492591-18492610 | None:intergenic | 30.0% | |
AGAATCTTATCACTTCACTT+AGG | + | chr2_3:18492668-18492687 | None:intergenic | 30.0% | |
CACACTTGAGTTATAAAATG+AGG | + | chr2_3:18492763-18492782 | None:intergenic | 30.0% | |
! | GTAAAAAATCAGAAAGCACA+GGG | + | chr2_3:18493048-18493067 | None:intergenic | 30.0% |
! | AGTAAAAAATCAGAAAGCAC+AGG | + | chr2_3:18493049-18493068 | None:intergenic | 30.0% |
!!! | TGTGCTTTCTGATTTTTTAC+TGG | - | chr2_3:18493048-18493067 | Msa0282490:CDS | 30.0% |
!!! | AATTTTTTGTTGCGGTTGAA+AGG | - | chr2_3:18493115-18493134 | Msa0282490:intron | 30.0% |
!!! | ATTTTTTGTTGCGGTTGAAA+GGG | - | chr2_3:18493116-18493135 | Msa0282490:intron | 30.0% |
GAATATAACAGCTTGAGTAA+TGG | + | chr2_3:18493187-18493206 | None:intergenic | 30.0% | |
! | TATTGATAACAACCGATGTT+TGG | - | chr2_3:18493490-18493509 | Msa0282490:intron | 30.0% |
! | ATTGATAACAACCGATGTTT+GGG | - | chr2_3:18493491-18493510 | Msa0282490:intron | 30.0% |
TATTTGGTAAAGATACTGCA+TGG | - | chr2_3:18493615-18493634 | Msa0282490:intron | 30.0% | |
! | TAAAAACGTGCTTTTGCATT+AGG | - | chr2_3:18493850-18493869 | Msa0282490:intron | 30.0% |
! | TATCTGTAACTGTTTTACAC+TGG | - | chr2_3:18494215-18494234 | Msa0282490:intron | 30.0% |
ATAAGATCAGCAACATTCAT+TGG | + | chr2_3:18494449-18494468 | None:intergenic | 30.0% | |
TAGGAATTAGTGTTTGATTG+TGG | - | chr2_3:18494519-18494538 | Msa0282490:CDS | 30.0% | |
!!! | CTTCTGAAACTTTTGACATT+TGG | - | chr2_3:18494567-18494586 | Msa0282490:CDS | 30.0% |
GTAGCTTATTCGACTTTCTA+GGG | - | chr2_3:18490463-18490482 | Msa0282490:three_prime_UTR | 35.0% | |
! | ATAAAAGACGATTTGCTTCG+TGG | - | chr2_3:18490658-18490677 | Msa0282490:three_prime_UTR | 35.0% |
AAGGTTTCTCAAATCCGTAT+TGG | + | chr2_3:18490690-18490709 | None:intergenic | 35.0% | |
ACATCCCTTCCTTGAATAAT+CGG | + | chr2_3:18490739-18490758 | None:intergenic | 35.0% | |
! | TTAGGGTAATTAGGGTTTTG+AGG | - | chr2_3:18490958-18490977 | Msa0282490:intron | 35.0% |
!!! | TTAGGGTTTTGAGGTTTGAT+TGG | - | chr2_3:18490967-18490986 | Msa0282490:intron | 35.0% |
!! | TTAGGGTTTTCAGGGTAATT+AGG | - | chr2_3:18491074-18491093 | Msa0282490:intron | 35.0% |
!! | TAGGGTTTTCAGGGTAATTA+GGG | - | chr2_3:18491075-18491094 | Msa0282490:intron | 35.0% |
AGAAAGTTTAATGAGGGACT+TGG | - | chr2_3:18491165-18491184 | Msa0282490:CDS | 35.0% | |
GAAAGTTTAATGAGGGACTT+GGG | - | chr2_3:18491166-18491185 | Msa0282490:CDS | 35.0% | |
AAGCATTTGTGAGACAGTTT+GGG | + | chr2_3:18491319-18491338 | None:intergenic | 35.0% | |
TAAGCATTTGTGAGACAGTT+TGG | + | chr2_3:18491320-18491339 | None:intergenic | 35.0% | |
ATGAGCCAAATCCAAATACA+AGG | + | chr2_3:18491381-18491400 | None:intergenic | 35.0% | |
!! | CGGAGATGTTTTTAATCATC+TGG | - | chr2_3:18491733-18491752 | Msa0282490:CDS | 35.0% |
TTCATAACCTTAACGATGTG+TGG | - | chr2_3:18491760-18491779 | Msa0282490:CDS | 35.0% | |
TATAACTTTCTCAGTCTGTG+AGG | + | chr2_3:18491886-18491905 | None:intergenic | 35.0% | |
GACATTAGAAAACTTGAGCA+CGG | - | chr2_3:18491972-18491991 | Msa0282490:intron | 35.0% | |
TCTTTATCATGTCACAGACT+CGG | + | chr2_3:18492025-18492044 | None:intergenic | 35.0% | |
!! | CTTTGTCATTGTGTTTTGAG+TGG | - | chr2_3:18492294-18492313 | Msa0282490:CDS | 35.0% |
GAAGACTTCACAATGTCTTA+AGG | - | chr2_3:18492390-18492409 | Msa0282490:intron | 35.0% | |
TTTAGTGACCTGACATCATA+TGG | - | chr2_3:18492542-18492561 | Msa0282490:intron | 35.0% | |
AAATAAGCAGCTACATTGGT+TGG | + | chr2_3:18492587-18492606 | None:intergenic | 35.0% | |
ACAAACATCACTTCAGTAAC+CGG | + | chr2_3:18492808-18492827 | None:intergenic | 35.0% | |
TCAATTCATCACGCTTTACA+AGG | + | chr2_3:18492996-18493015 | None:intergenic | 35.0% | |
AAAGCGTGATGAATTGACAT+TGG | - | chr2_3:18492999-18493018 | Msa0282490:intron | 35.0% | |
TTGCTTAATGCCCTGTAATA+AGG | + | chr2_3:18493097-18493116 | None:intergenic | 35.0% | |
TTATATTCTGCAACACCAAG+CGG | - | chr2_3:18493199-18493218 | Msa0282490:CDS | 35.0% | |
AATCTACCATACTGATCCTA+CGG | + | chr2_3:18493250-18493269 | None:intergenic | 35.0% | |
ATATATATTCCCCTTGGAAC+AGG | - | chr2_3:18493347-18493366 | Msa0282490:CDS | 35.0% | |
ATCGGTTGTTATCAATACTC+GGG | + | chr2_3:18493487-18493506 | None:intergenic | 35.0% | |
! | CATCGGTTGTTATCAATACT+CGG | + | chr2_3:18493488-18493507 | None:intergenic | 35.0% |
!! | TCTGTTTCTATGTGAGTGTT+TGG | - | chr2_3:18493699-18493718 | Msa0282490:intron | 35.0% |
AGTGTTTGGATTACTGAAGA+AGG | - | chr2_3:18493713-18493732 | Msa0282490:intron | 35.0% | |
GTGTTTGGATTACTGAAGAA+GGG | - | chr2_3:18493714-18493733 | Msa0282490:intron | 35.0% | |
AATTGCATGATCAGTATCAC+CGG | + | chr2_3:18494051-18494070 | None:intergenic | 35.0% | |
ATGCAATTGCTTCTGTTATC+AGG | - | chr2_3:18494063-18494082 | Msa0282490:intron | 35.0% | |
ATGTAGAGCTCTCGATTATT+TGG | + | chr2_3:18494115-18494134 | None:intergenic | 35.0% | |
TGTCAGTACCATATAAGACA+TGG | + | chr2_3:18494268-18494287 | None:intergenic | 35.0% | |
ATGTATATCGAACAAAGAGC+AGG | + | chr2_3:18494307-18494326 | None:intergenic | 35.0% | |
AGAAAAACACGTTATCTCTG+CGG | + | chr2_3:18494623-18494642 | None:intergenic | 35.0% | |
! | CGTGTTTTTCTTTGCTGAAA+TGG | - | chr2_3:18494632-18494651 | Msa0282490:CDS | 35.0% |
!!! | TGATATGTGATGTTTTGACG+AGG | - | chr2_3:18494744-18494763 | Msa0282490:five_prime_UTR | 35.0% |
ATAAGCTACGCCTTACGTTT+GGG | + | chr2_3:18490452-18490471 | None:intergenic | 40.0% | |
AATAAGCTACGCCTTACGTT+TGG | + | chr2_3:18490453-18490472 | None:intergenic | 40.0% | |
CGTAGCTTATTCGACTTTCT+AGG | - | chr2_3:18490462-18490481 | Msa0282490:three_prime_UTR | 40.0% | |
CAAACCTTCTTCCTTCATCT+CGG | - | chr2_3:18490513-18490532 | Msa0282490:three_prime_UTR | 40.0% | |
ATGGATTTCGAAACTACCGA+AGG | - | chr2_3:18490601-18490620 | Msa0282490:three_prime_UTR | 40.0% | |
CTTCGTGGAATCTACCAATA+CGG | - | chr2_3:18490673-18490692 | Msa0282490:three_prime_UTR | 40.0% | |
AGAAGAAACTCACTCTCTGA+CGG | + | chr2_3:18490836-18490855 | None:intergenic | 40.0% | |
! | ATCCAAACAGGCCTTGTATT+TGG | - | chr2_3:18491367-18491386 | Msa0282490:intron | 40.0% |
ATCCAAATACAAGGCCTGTT+TGG | + | chr2_3:18491372-18491391 | None:intergenic | 40.0% | |
! | ACAGGCCTTGTATTTGGATT+TGG | - | chr2_3:18491373-18491392 | Msa0282490:intron | 40.0% |
CTGCTTGCATTACAGATACT+CGG | - | chr2_3:18491525-18491544 | Msa0282490:intron | 40.0% | |
!! | TTAACGATGTGTGGTTTGCT+CGG | - | chr2_3:18491769-18491788 | Msa0282490:CDS | 40.0% |
GAGTCTGTGACATGATAAAG+AGG | - | chr2_3:18492024-18492043 | Msa0282490:intron | 40.0% | |
TACCAGAACTAGCAACTTGA+TGG | + | chr2_3:18492069-18492088 | None:intergenic | 40.0% | |
AGACAATCCTTGACACATGA+CGG | + | chr2_3:18492143-18492162 | None:intergenic | 40.0% | |
TCTGATGAAATGTTGAGCAG+AGG | - | chr2_3:18492194-18492213 | Msa0282490:intron | 40.0% | |
CTGATGAAATGTTGAGCAGA+GGG | - | chr2_3:18492195-18492214 | Msa0282490:intron | 40.0% | |
GTAAAGAGAACCTGAAGATC+CGG | + | chr2_3:18492260-18492279 | None:intergenic | 40.0% | |
ACTCAAGTGTGTGCATCTTT+AGG | - | chr2_3:18492772-18492791 | Msa0282490:intron | 40.0% | |
CTCAAGTGTGTGCATCTTTA+GGG | - | chr2_3:18492773-18492792 | Msa0282490:intron | 40.0% | |
CAAACATCACTTCAGTAACC+GGG | + | chr2_3:18492807-18492826 | None:intergenic | 40.0% | |
AGAAATCAGGCAAACCTACA+CGG | + | chr2_3:18492911-18492930 | None:intergenic | 40.0% | |
TACGCTACCTCATGAAATTC+TGG | - | chr2_3:18492933-18492952 | Msa0282490:intron | 40.0% | |
GTCATCTCCAGAATTTCATG+AGG | + | chr2_3:18492943-18492962 | None:intergenic | 40.0% | |
AGTTTATGACAGATCCAGTG+AGG | - | chr2_3:18492968-18492987 | Msa0282490:intron | 40.0% | |
CTTAATGCCCTGTAATAAGG+AGG | + | chr2_3:18493094-18493113 | None:intergenic | 40.0% | |
! | GTTTTCTTTTACCTTCCGCT+TGG | + | chr2_3:18493217-18493236 | None:intergenic | 40.0% |
GAAAACTATCAAGGATCCGT+AGG | - | chr2_3:18493231-18493250 | Msa0282490:CDS | 40.0% | |
TTCACTGTTTCATCCATGCA+CGG | - | chr2_3:18493405-18493424 | Msa0282490:CDS | 40.0% | |
AAGGGAAAGAGATGCCATTA+TGG | - | chr2_3:18493440-18493459 | Msa0282490:intron | 40.0% | |
AGGGAAAGAGATGCCATTAT+GGG | - | chr2_3:18493441-18493460 | Msa0282490:intron | 40.0% | |
AACTTGCCTGTTGTACATCA+AGG | + | chr2_3:18493524-18493543 | None:intergenic | 40.0% | |
CAACATGGCTCAAGAGATAT+TGG | + | chr2_3:18493657-18493676 | None:intergenic | 40.0% | |
CCTAAGCAACTGAAACAACA+TGG | + | chr2_3:18493672-18493691 | None:intergenic | 40.0% | |
!! | CCATGTTGTTTCAGTTGCTT+AGG | - | chr2_3:18493669-18493688 | Msa0282490:intron | 40.0% |
TTGTCAAAATCTAGTCCCAG+CGG | - | chr2_3:18493820-18493839 | Msa0282490:intron | 40.0% | |
AGAGCTCTCGATTATTTGGA+AGG | + | chr2_3:18494111-18494130 | None:intergenic | 40.0% | |
ATCGAGAGCTCTACATTCAT+CGG | - | chr2_3:18494119-18494138 | Msa0282490:intron | 40.0% | |
! | CTGTAACTGTTTTACACTGG+AGG | - | chr2_3:18494218-18494237 | Msa0282490:intron | 40.0% |
ACTTATAGTCGGGTCAATCA+TGG | - | chr2_3:18494328-18494347 | Msa0282490:intron | 40.0% | |
CATTGGCATCTCATCAATCT+GGG | + | chr2_3:18494432-18494451 | None:intergenic | 40.0% | |
TCATTGGCATCTCATCAATC+TGG | + | chr2_3:18494433-18494452 | None:intergenic | 40.0% | |
GAGTGCGTTTGTCAAATTTG+TGG | - | chr2_3:18494496-18494515 | Msa0282490:CDS | 40.0% | |
GCGTTTGTCAAATTTGTGGT+AGG | - | chr2_3:18494500-18494519 | Msa0282490:CDS | 40.0% | |
TCCATTGCTTACTTTCGATG+TGG | - | chr2_3:18494698-18494717 | Msa0282490:CDS | 40.0% | |
TCCACATCGAAAGTAAGCAA+TGG | + | chr2_3:18494702-18494721 | None:intergenic | 40.0% | |
CCTTACGTTTGGGAGCTAAA+AGG | + | chr2_3:18490442-18490461 | None:intergenic | 45.0% | |
!!! | CCTTTTAGCTCCCAAACGTA+AGG | - | chr2_3:18490439-18490458 | Msa0282490:three_prime_UTR | 45.0% |
CGAGATGAAGGAAGAAGGTT+TGG | + | chr2_3:18490515-18490534 | None:intergenic | 45.0% | |
AATCGGAAGCTTCGAAGAGA+TGG | - | chr2_3:18490633-18490652 | Msa0282490:three_prime_UTR | 45.0% | |
ATCGGAAGCTTCGAAGAGAT+GGG | - | chr2_3:18490634-18490653 | Msa0282490:three_prime_UTR | 45.0% | |
AGGAAGGGATGTTATTGCTC+AGG | - | chr2_3:18490747-18490766 | Msa0282490:three_prime_UTR | 45.0% | |
GACTTCGATGATTGCCTTGA+CGG | - | chr2_3:18490789-18490808 | Msa0282490:exon | 45.0% | |
AACAACCTGACAAACCGTCA+AGG | + | chr2_3:18490806-18490825 | None:intergenic | 45.0% | |
AGTGAGTGTAGAGTAGAGTG+AGG | - | chr2_3:18491405-18491424 | Msa0282490:intron | 45.0% | |
GTTATGGGTGCATGTGATAC+TGG | - | chr2_3:18491464-18491483 | Msa0282490:intron | 45.0% | |
GTGCATGTGATACTGGCATT+TGG | - | chr2_3:18491471-18491490 | Msa0282490:intron | 45.0% | |
GAGCAAACCACACATCGTTA+AGG | + | chr2_3:18491770-18491789 | None:intergenic | 45.0% | |
ATACAAGCCCATGCTTGCAT+TGG | - | chr2_3:18491930-18491949 | Msa0282490:intron | 45.0% | |
TTTCCCTCCAATGCAAGCAT+GGG | + | chr2_3:18491940-18491959 | None:intergenic | 45.0% | |
! | TTTTCCCTCCAATGCAAGCA+TGG | + | chr2_3:18491941-18491960 | None:intergenic | 45.0% |
TTGCATTGGAGGGAAAAGTG+TGG | - | chr2_3:18491944-18491963 | Msa0282490:intron | 45.0% | |
! | TGCATTGGAGGGAAAAGTGT+GGG | - | chr2_3:18491945-18491964 | Msa0282490:intron | 45.0% |
TTCTTTGCCGTCATGTGTCA+AGG | - | chr2_3:18492133-18492152 | Msa0282490:CDS | 45.0% | |
TGTGTACAGATATCTCCCAC+CGG | - | chr2_3:18492238-18492257 | Msa0282490:intron | 45.0% | |
!! | TGACAAAGATGAGGGCATCA+AGG | + | chr2_3:18492282-18492301 | None:intergenic | 45.0% |
ACGTGACTCCATATGATGTC+AGG | + | chr2_3:18492553-18492572 | None:intergenic | 45.0% | |
!! | ATCTTTAGGGTCCTTGATCC+CGG | - | chr2_3:18492786-18492805 | Msa0282490:intron | 45.0% |
GCGTGATGAATTGACATTGG+AGG | - | chr2_3:18493002-18493021 | Msa0282490:intron | 45.0% | |
TAACCCTGCCTCCTTATTAC+AGG | - | chr2_3:18493083-18493102 | Msa0282490:intron | 45.0% | |
AACCCTGCCTCCTTATTACA+GGG | - | chr2_3:18493084-18493103 | Msa0282490:intron | 45.0% | |
! | TTTTGTTGCGGTTGAAAGGG+AGG | - | chr2_3:18493119-18493138 | Msa0282490:intron | 45.0% |
AAGGATCCGTAGGATCAGTA+TGG | - | chr2_3:18493241-18493260 | Msa0282490:CDS | 45.0% | |
TATATTCCCCTTGGAACAGG+TGG | - | chr2_3:18493350-18493369 | Msa0282490:CDS | 45.0% | |
ATGGCATCTCTTTCCCTTTG+AGG | + | chr2_3:18493438-18493457 | None:intergenic | 45.0% | |
AGCACGGAATTCACCCATAA+TGG | + | chr2_3:18493457-18493476 | None:intergenic | 45.0% | |
ATTATGGGTGAATTCCGTGC+TGG | - | chr2_3:18493456-18493475 | Msa0282490:intron | 45.0% | |
! | CGTTTTTACCACATTCCGCT+GGG | + | chr2_3:18493838-18493857 | None:intergenic | 45.0% |
! | ACGTTTTTACCACATTCCGC+TGG | + | chr2_3:18493839-18493858 | None:intergenic | 45.0% |
TGACATTCTCACCCTAACAG+TGG | - | chr2_3:18494010-18494029 | Msa0282490:intron | 45.0% | |
GAGCTCTACATTCATCGGAT+TGG | - | chr2_3:18494124-18494143 | Msa0282490:intron | 45.0% | |
!! | ATTCATCGGATTGGTCGTTC+TGG | - | chr2_3:18494133-18494152 | Msa0282490:intron | 45.0% |
!! | ATTGGTCGTTCTGGACGTTT+TGG | - | chr2_3:18494142-18494161 | Msa0282490:intron | 45.0% |
!! | TTCTGGACGTTTTGGACGAA+AGG | - | chr2_3:18494150-18494169 | Msa0282490:intron | 45.0% |
!! | GGTACTGACATGCTCTGATT+TGG | - | chr2_3:18494278-18494297 | Msa0282490:intron | 45.0% |
!! | GGGTCAATCATGGTTTTGCA+GGG | - | chr2_3:18494338-18494357 | Msa0282490:intron | 45.0% |
AGGACATGTATTCTGCTGAG+TGG | - | chr2_3:18494474-18494493 | Msa0282490:CDS | 45.0% | |
ACCTTCTTCCTTCATCTCGG+CGG | - | chr2_3:18490516-18490535 | Msa0282490:three_prime_UTR | 50.0% | |
! | ACCGAAGGCGTGAAAGCAAT+CGG | - | chr2_3:18490616-18490635 | Msa0282490:three_prime_UTR | 50.0% |
TCCGATTGCTTTCACGCCTT+CGG | + | chr2_3:18490620-18490639 | None:intergenic | 50.0% | |
TCGGAAGCTTCGAAGAGATG+GGG | - | chr2_3:18490635-18490654 | Msa0282490:three_prime_UTR | 50.0% | |
!! | TGGCGCCGATTATTCAAGGA+AGG | - | chr2_3:18490731-18490750 | Msa0282490:three_prime_UTR | 50.0% |
!! | GGCGCCGATTATTCAAGGAA+GGG | - | chr2_3:18490732-18490751 | Msa0282490:three_prime_UTR | 50.0% |
GTTATTGCTCAGGCGCAATC+TGG | - | chr2_3:18490757-18490776 | Msa0282490:three_prime_UTR | 50.0% | |
GATTGCCTTGACGGTTTGTC+AGG | - | chr2_3:18490798-18490817 | Msa0282490:exon | 50.0% | |
AGAAACTCACTCTCTGACGG+AGG | + | chr2_3:18490833-18490852 | None:intergenic | 50.0% | |
TGTGTCTCCGACAAGAGAAC+TGG | - | chr2_3:18491860-18491879 | Msa0282490:CDS | 50.0% | |
TGTGAGGCCAGTTCTCTTGT+CGG | + | chr2_3:18491870-18491889 | None:intergenic | 50.0% | |
AAGCCCATGCTTGCATTGGA+GGG | - | chr2_3:18491934-18491953 | Msa0282490:intron | 50.0% | |
! | AACTAGCAACTTGATGGCCC+TGG | + | chr2_3:18492063-18492082 | None:intergenic | 50.0% |
! | GGCCATCAAGTTGCTAGTTC+TGG | - | chr2_3:18492064-18492083 | Msa0282490:CDS | 50.0% |
ATATCTCCCACCGGATCTTC+AGG | - | chr2_3:18492247-18492266 | Msa0282490:intron | 50.0% | |
AGAGAACCTGAAGATCCGGT+GGG | + | chr2_3:18492256-18492275 | None:intergenic | 50.0% | |
AAGAGAACCTGAAGATCCGG+TGG | + | chr2_3:18492257-18492276 | None:intergenic | 50.0% | |
CACTTCAGTAACCGGGATCA+AGG | + | chr2_3:18492800-18492819 | None:intergenic | 50.0% | |
GAGGTAGCGTAGCAGAAATC+AGG | + | chr2_3:18492924-18492943 | None:intergenic | 50.0% | |
CGCTTTACAAGGATCCTCAC+TGG | + | chr2_3:18492985-18493004 | None:intergenic | 50.0% | |
TGCCCTGTAATAAGGAGGCA+GGG | + | chr2_3:18493089-18493108 | None:intergenic | 50.0% | |
ATGCCCTGTAATAAGGAGGC+AGG | + | chr2_3:18493090-18493109 | None:intergenic | 50.0% | |
TTGCGGTTGAAAGGGAGGAA+TGG | - | chr2_3:18493124-18493143 | Msa0282490:intron | 50.0% | |
ATTCTGCAACACCAAGCGGA+AGG | - | chr2_3:18493203-18493222 | Msa0282490:CDS | 50.0% | |
AACCAGTCCACCTGTTCCAA+GGG | + | chr2_3:18493360-18493379 | None:intergenic | 50.0% | |
TAACCAGTCCACCTGTTCCA+AGG | + | chr2_3:18493361-18493380 | None:intergenic | 50.0% | |
! | ATACTCGGGTTGTTCCAGCA+CGG | + | chr2_3:18493473-18493492 | None:intergenic | 50.0% |
! | TCGTGGCCTTGATGTACAAC+AGG | - | chr2_3:18493515-18493534 | Msa0282490:intron | 50.0% |
AATCTAGTCCCAGCGGAATG+TGG | - | chr2_3:18493827-18493846 | Msa0282490:intron | 50.0% | |
!! | CGGGTCAATCATGGTTTTGC+AGG | - | chr2_3:18494337-18494356 | Msa0282490:intron | 50.0% |
GAATCGCCGACGAACGGTTA+CGG | - | chr2_3:18490567-18490586 | Msa0282490:three_prime_UTR | 55.0% | |
GCACGCTGTTGAATCGCAGA+AGG | + | chr2_3:18490709-18490728 | None:intergenic | 55.0% | |
TGCGATTCAACAGCGTGCTG+TGG | - | chr2_3:18490711-18490730 | Msa0282490:three_prime_UTR | 55.0% | |
!! | GCTGTGGCGCCGATTATTCA+AGG | - | chr2_3:18490727-18490746 | Msa0282490:three_prime_UTR | 55.0% |
CAAGCCCATGCTTGCATTGG+AGG | - | chr2_3:18491933-18491952 | Msa0282490:intron | 55.0% | |
CACGGAGTTCATGTCGTGTC+TGG | - | chr2_3:18491990-18492009 | Msa0282490:intron | 55.0% | |
! | CATGTCGTGTCTGGAACTCC+TGG | - | chr2_3:18491999-18492018 | Msa0282490:intron | 55.0% |
ATCATGTCACAGACTCGGCC+AGG | + | chr2_3:18492020-18492039 | None:intergenic | 55.0% | |
AGAGGAGAACATTGCGCACC+AGG | - | chr2_3:18492042-18492061 | Msa0282490:intron | 55.0% | |
GAGGAGAACATTGCGCACCA+GGG | - | chr2_3:18492043-18492062 | Msa0282490:intron | 55.0% | |
ACCAGTCCACCTGTTCCAAG+GGG | + | chr2_3:18493359-18493378 | None:intergenic | 55.0% | |
TTGAGGCATGTCACCGTGCA+TGG | + | chr2_3:18493421-18493440 | None:intergenic | 55.0% | |
TGCACGGTGACATGCCTCAA+AGG | - | chr2_3:18493421-18493440 | Msa0282490:intron | 55.0% | |
GCACGGTGACATGCCTCAAA+GGG | - | chr2_3:18493422-18493441 | Msa0282490:intron | 55.0% | |
ACAACCGATGTTTGGGCTCG+TGG | - | chr2_3:18493498-18493517 | Msa0282490:intron | 55.0% | |
AAGGCCACGAGCCCAAACAT+CGG | + | chr2_3:18493505-18493524 | None:intergenic | 55.0% | |
GCCGCCGAGATGAAGGAAGA+AGG | + | chr2_3:18490520-18490539 | None:intergenic | 60.0% | |
TTCCTTCATCTCGGCGGCGA+TGG | - | chr2_3:18490522-18490541 | Msa0282490:three_prime_UTR | 60.0% | |
GGCGACAGCTTCTGTGGTTC+CGG | - | chr2_3:18490543-18490562 | Msa0282490:three_prime_UTR | 60.0% | |
CGTTCGCCGTAACCGTTCGT+CGG | + | chr2_3:18490576-18490595 | None:intergenic | 60.0% | |
ACGAACGGTTACGGCGAACG+AGG | - | chr2_3:18490576-18490595 | Msa0282490:three_prime_UTR | 60.0% | |
GGTTACGGCGAACGAGGACA+TGG | - | chr2_3:18490582-18490601 | Msa0282490:three_prime_UTR | 60.0% | |
GCTCAGGCGCAATCTGGTAC+TGG | - | chr2_3:18490763-18490782 | Msa0282490:three_prime_UTR | 60.0% | |
TCCCCTTGGAACAGGTGGAC+TGG | - | chr2_3:18493355-18493374 | Msa0282490:CDS | 60.0% | |
GGCGATGGCGACAGCTTCTG+TGG | - | chr2_3:18490537-18490556 | Msa0282490:three_prime_UTR | 65.0% | |
TCCGGCGAATCGCCGACGAA+CGG | - | chr2_3:18490561-18490580 | Msa0282490:three_prime_UTR | 65.0% | |
ACCGTTCGTCGGCGATTCGC+CGG | + | chr2_3:18490565-18490584 | None:intergenic | 65.0% | |
CGCCATCGCCGCCGAGATGA+AGG | + | chr2_3:18490527-18490546 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 18490431 | 18494840 | 18490431 | ID=Msa0282490;Name=Msa0282490 |
chr2_3 | mRNA | 18490431 | 18494840 | 18490431 | ID=Msa0282490-mRNA-1;Parent=Msa0282490;Name=Msa0282490-mRNA-1;_AED=0.11;_eAED=0.11;_QI=110|0.85|0.87|1|0.85|0.87|8|368|412 |
chr2_3 | exon | 18490431 | 18490912 | 18490431 | ID=Msa0282490-mRNA-1:exon:7620;Parent=Msa0282490-mRNA-1 |
chr2_3 | exon | 18491100 | 18491186 | 18491100 | ID=Msa0282490-mRNA-1:exon:7619;Parent=Msa0282490-mRNA-1 |
chr2_3 | exon | 18491717 | 18491902 | 18491717 | ID=Msa0282490-mRNA-1:exon:7618;Parent=Msa0282490-mRNA-1 |
chr2_3 | exon | 18492047 | 18492166 | 18492047 | ID=Msa0282490-mRNA-1:exon:7617;Parent=Msa0282490-mRNA-1 |
chr2_3 | exon | 18492248 | 18492355 | 18492248 | ID=Msa0282490-mRNA-1:exon:7616;Parent=Msa0282490-mRNA-1 |
chr2_3 | exon | 18493003 | 18493083 | 18493003 | ID=Msa0282490-mRNA-1:exon:7615;Parent=Msa0282490-mRNA-1 |
chr2_3 | exon | 18493186 | 18493426 | 18493186 | ID=Msa0282490-mRNA-1:exon:7614;Parent=Msa0282490-mRNA-1 |
chr2_3 | exon | 18494429 | 18494840 | 18494429 | ID=Msa0282490-mRNA-1:exon:7613;Parent=Msa0282490-mRNA-1 |
chr2_3 | five_prime_UTR | 18494731 | 18494840 | 18494731 | ID=Msa0282490-mRNA-1:five_prime_utr;Parent=Msa0282490-mRNA-1 |
chr2_3 | CDS | 18494429 | 18494730 | 18494429 | ID=Msa0282490-mRNA-1:cds;Parent=Msa0282490-mRNA-1 |
chr2_3 | CDS | 18493186 | 18493426 | 18493186 | ID=Msa0282490-mRNA-1:cds;Parent=Msa0282490-mRNA-1 |
chr2_3 | CDS | 18493003 | 18493083 | 18493003 | ID=Msa0282490-mRNA-1:cds;Parent=Msa0282490-mRNA-1 |
chr2_3 | CDS | 18492248 | 18492355 | 18492248 | ID=Msa0282490-mRNA-1:cds;Parent=Msa0282490-mRNA-1 |
chr2_3 | CDS | 18492047 | 18492166 | 18492047 | ID=Msa0282490-mRNA-1:cds;Parent=Msa0282490-mRNA-1 |
chr2_3 | CDS | 18491717 | 18491902 | 18491717 | ID=Msa0282490-mRNA-1:cds;Parent=Msa0282490-mRNA-1 |
chr2_3 | CDS | 18491100 | 18491186 | 18491100 | ID=Msa0282490-mRNA-1:cds;Parent=Msa0282490-mRNA-1 |
chr2_3 | CDS | 18490799 | 18490912 | 18490799 | ID=Msa0282490-mRNA-1:cds;Parent=Msa0282490-mRNA-1 |
chr2_3 | three_prime_UTR | 18490431 | 18490798 | 18490431 | ID=Msa0282490-mRNA-1:three_prime_utr;Parent=Msa0282490-mRNA-1 |
Gene Sequence |
Protein sequence |