Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0282670 | KEH17687.1 | 73.077 | 52 | 14 | 0 | 107 | 158 | 9 | 60 | 2.98e-11 | 73.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0282670 | A0A072TJR7 | 73.077 | 52 | 14 | 0 | 107 | 158 | 9 | 60 | 1.42e-11 | 73.9 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0201520 | Msa0282670 | 0.827037 | 1.951666e-54 | -8.615850e-47 |
| Msa0244140 | Msa0282670 | 0.802298 | 5.996225e-49 | -8.615850e-47 |
| Msa0244190 | Msa0282670 | 0.810042 | 1.402956e-50 | -8.615850e-47 |
| Msa0282670 | Msa0530650 | 0.803880 | 2.822115e-49 | -8.615850e-47 |
| Msa0282670 | Msa0587190 | 0.804102 | 2.538151e-49 | -8.615850e-47 |
| Msa0282670 | Msa0626990 | 0.800145 | 1.653541e-48 | -8.615850e-47 |
| Msa0282670 | Msa0627350 | 0.803585 | 3.249452e-49 | -8.615850e-47 |
| Msa0282670 | Msa0679550 | 0.809575 | 1.768518e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 67 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGTGTGGGTTGGGAATA+AGG | 0.174980 | 2_3:-19079952 | None:intergenic |
| GTCCTCACTCGCATGCTTAC+CGG | 0.290359 | 2_3:+19083783 | Msa0282670:CDS |
| AAAGAAAACAACGAACAATA+TGG | 0.320362 | 2_3:+19082425 | Msa0282670:CDS |
| GCCACCTCATCACAACTTAA+CGG | 0.363774 | 2_3:+19079973 | Msa0282670:CDS |
| GTGTTGATTCTACTATGAAA+TGG | 0.381479 | 2_3:+19084986 | Msa0282670:CDS |
| ATGCTTACCGGGAAACTTCC+CGG | 0.398566 | 2_3:+19083795 | Msa0282670:CDS |
| TGAGGTGGCAAGTGTGGGTT+GGG | 0.399655 | 2_3:-19079959 | None:intergenic |
| TGTTGATTCTACTATGAAAT+GGG | 0.403303 | 2_3:+19084987 | Msa0282670:CDS |
| GTGTTGATTCTACTAAGAAA+TGG | 0.406612 | 2_3:+19081575 | Msa0282670:CDS |
| ATCCGGAGGCTGTGTAGGTA+TGG | 0.413551 | 2_3:-19083962 | None:intergenic |
| AAAAGACTCGTGTTGGTTTG+TGG | 0.430549 | 2_3:-19083749 | None:intergenic |
| CCTCTCATTCCGATGTGATT+CGG | 0.433183 | 2_3:+19083986 | Msa0282670:CDS |
| TGACCTACCGGGAAGTTTCC+CGG | 0.433832 | 2_3:-19083802 | None:intergenic |
| CGGATAGTGCCCGTTCCAAC+TGG | 0.436083 | 2_3:+19084038 | Msa0282670:CDS |
| AAACAACGAACAATATGGAT+TGG | 0.457233 | 2_3:+19082430 | Msa0282670:CDS |
| TCCTCACTCGCATGCTTACC+GGG | 0.458715 | 2_3:+19083784 | Msa0282670:CDS |
| AAAGACTCGTGTTGGTTTGT+GGG | 0.458965 | 2_3:-19083748 | None:intergenic |
| TGTTGGTTTGTGGGGTTAGT+CGG | 0.461361 | 2_3:-19083739 | None:intergenic |
| CCGAATCACATCGGAATGAG+AGG | 0.461543 | 2_3:-19083986 | None:intergenic |
| TACTATTTACCATGAGCAAC+GGG | 0.463919 | 2_3:-19083599 | None:intergenic |
| TTAATGTGGGGTCATCCTTA+CGG | 0.474980 | 2_3:+19084018 | Msa0282670:CDS |
| AGGTTGCCGCCAGTTGGAAC+GGG | 0.482871 | 2_3:-19084047 | None:intergenic |
| TCGGCTCCTCTTATTAATGT+GGG | 0.486024 | 2_3:+19084005 | Msa0282670:CDS |
| GGCAACCTTTCGTATCCAAC+TGG | 0.488648 | 2_3:+19084062 | Msa0282670:CDS |
| TTCGGCTCCTCTTATTAATG+TGG | 0.491525 | 2_3:+19084004 | Msa0282670:CDS |
| TGTTGATTCTACTAAGAAAT+GGG | 0.492832 | 2_3:+19081576 | Msa0282670:CDS |
| TTGTGATGAGGTGGCAAGTG+TGG | 0.494224 | 2_3:-19079965 | None:intergenic |
| ATGAGGTGGCAAGTGTGGGT+TGG | 0.494754 | 2_3:-19079960 | None:intergenic |
| TACGAAAGGTTGCCGCCAGT+TGG | 0.500121 | 2_3:-19084053 | None:intergenic |
| AACAACGAACAATATGGATT+GGG | 0.505604 | 2_3:+19082431 | Msa0282670:CDS |
| TGAAGAAGGAAAGGAACGAC+AGG | 0.506971 | 2_3:+19079876 | Msa0282670:CDS |
| AAGGTTGCCGCCAGTTGGAA+CGG | 0.512793 | 2_3:-19084048 | None:intergenic |
| GATGACCCCACATTAATAAG+AGG | 0.513388 | 2_3:-19084011 | None:intergenic |
| GGAGCTTTGCCCGTTGCTCA+TGG | 0.513913 | 2_3:+19083590 | Msa0282670:CDS |
| TCCGGAGGCTGTGTAGGTAT+GGG | 0.514967 | 2_3:-19083961 | None:intergenic |
| TCCCATACCTACACAGCCTC+CGG | 0.524792 | 2_3:+19083960 | Msa0282670:CDS |
| TGGGAAGAATGAAGAAGGAA+AGG | 0.525960 | 2_3:+19079867 | None:intergenic |
| TGGGCTGTAGCAGAATTTGT+AGG | 0.533762 | 2_3:+19081595 | Msa0282670:CDS |
| ACCTTTCGTATCCAACTGGC+GGG | 0.537792 | 2_3:+19084066 | Msa0282670:CDS |
| ACATCGGAATGAGAGGGATC+CGG | 0.538560 | 2_3:-19083979 | None:intergenic |
| GCTTTCGATATCCCGCCAGT+TGG | 0.540877 | 2_3:-19084077 | None:intergenic |
| CTACTATTTACCATGAGCAA+CGG | 0.550641 | 2_3:-19083600 | None:intergenic |
| CATGCTGAAAAGACTCGTGT+TGG | 0.553044 | 2_3:-19083756 | None:intergenic |
| AGCAACGGGCAAAGCTCCGA+CGG | 0.562519 | 2_3:-19083585 | None:intergenic |
| TGTGATGAGGTGGCAAGTGT+GGG | 0.576484 | 2_3:-19079964 | None:intergenic |
| ACCGTTAAGTTGTGATGAGG+TGG | 0.581087 | 2_3:-19079974 | None:intergenic |
| AACGGGCAAAGCTCCGACGG+AGG | 0.583488 | 2_3:-19083582 | None:intergenic |
| CGGCTCCTCTTATTAATGTG+GGG | 0.590894 | 2_3:+19084006 | Msa0282670:CDS |
| GAGGGATCCGGAGGCTGTGT+AGG | 0.591242 | 2_3:-19083967 | None:intergenic |
| AACGAACAATATGGATTGGG+TGG | 0.597691 | 2_3:+19082434 | Msa0282670:CDS |
| TCCCGGTAAGCATGCGAGTG+AGG | 0.598261 | 2_3:-19083785 | None:intergenic |
| AAGACTCGTGTTGGTTTGTG+GGG | 0.607170 | 2_3:-19083747 | None:intergenic |
| GGATATCGAAAGCCACGTCG+TGG | 0.608094 | 2_3:+19084087 | Msa0282670:CDS |
| GACTATTTAAGCTTGGAACA+AGG | 0.609932 | 2_3:+19083528 | Msa0282670:intron |
| AAAACCGTTAAGTTGTGATG+AGG | 0.609983 | 2_3:-19079977 | None:intergenic |
| AACCTTTCGTATCCAACTGG+CGG | 0.611911 | 2_3:+19084065 | Msa0282670:CDS |
| TGGAACGGGCACTATCCGTA+AGG | 0.628192 | 2_3:-19084033 | None:intergenic |
| GATATCGAAAGCCACGTCGT+GGG | 0.629384 | 2_3:+19084088 | Msa0282670:CDS |
| CGAATCACATCGGAATGAGA+GGG | 0.629883 | 2_3:-19083985 | None:intergenic |
| TCCCGCCAGTTGGATACGAA+AGG | 0.632564 | 2_3:-19084067 | None:intergenic |
| TGGGGAGTAACAGAATCTGT+AGG | 0.639252 | 2_3:+19085006 | Msa0282670:CDS |
| GTTGATTCTACTATGAAATG+GGG | 0.643497 | 2_3:+19084988 | Msa0282670:CDS |
| ATAGTGCCCGTTCCAACTGG+CGG | 0.657824 | 2_3:+19084041 | Msa0282670:CDS |
| TAAGAGGAGCCGAATCACAT+CGG | 0.660204 | 2_3:-19083995 | None:intergenic |
| TCGGAATGAGAGGGATCCGG+AGG | 0.667016 | 2_3:-19083976 | None:intergenic |
| ATGCTGTAACACCCACGACG+TGG | 0.702719 | 2_3:-19084099 | None:intergenic |
| TGGTGATGAAGAAAACGTGA+CGG | 0.747213 | 2_3:+19082454 | Msa0282670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTATAAATATATTATGTTT+TGG | - | chr2_3:19080326-19080345 | None:intergenic | 10.0% |
| !!! | TTTTAAAGATATTAAGTTTT+TGG | - | chr2_3:19080396-19080415 | None:intergenic | 10.0% |
| !!! | ATTTTCTTATTTTATATGTA+AGG | - | chr2_3:19080617-19080636 | None:intergenic | 10.0% |
| !! | TACATATAAAATAAGAAAAT+TGG | + | chr2_3:19080617-19080636 | Msa0282670:intron | 10.0% |
| !! | TAAATCTATTTAAGTAATAT+TGG | - | chr2_3:19081936-19081955 | None:intergenic | 10.0% |
| !! | TGAAGATTAAATAATATATA+TGG | + | chr2_3:19082387-19082406 | Msa0282670:intron | 10.0% |
| !!! | TTTTATAGAAATGATATTTA+TGG | - | chr2_3:19083383-19083402 | None:intergenic | 10.0% |
| !!! | CTTAAAAATATATTATGTTT+TGG | - | chr2_3:19084231-19084250 | None:intergenic | 10.0% |
| !!! | TTTTAAAGATATTAACTTTT+TGG | - | chr2_3:19084273-19084292 | None:intergenic | 10.0% |
| !!! | ATAAAAGTATAAATATATGA+AGG | + | chr2_3:19084292-19084311 | Msa0282670:intron | 10.0% |
| !! | TATAAAATAATACTGAAAAT+TGG | + | chr2_3:19084529-19084548 | Msa0282670:intron | 10.0% |
| !!! | TCTTCAAAAAAAAAAGTTTT+TGG | - | chr2_3:19080369-19080388 | None:intergenic | 15.0% |
| !!! | ATAAAAGTATAGATATATGA+AGG | + | chr2_3:19080415-19080434 | Msa0282670:intron | 15.0% |
| !!! | TTTATGTATTTAATTGGTTT+AGG | - | chr2_3:19080757-19080776 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTACTAAGTCA+AGG | - | chr2_3:19080989-19081008 | None:intergenic | 15.0% |
| !!! | AATTATAGTTTTCAAAGTTA+GGG | - | chr2_3:19081063-19081082 | None:intergenic | 15.0% |
| !!! | AAATTATAGTTTTCAAAGTT+AGG | - | chr2_3:19081064-19081083 | None:intergenic | 15.0% |
| !!! | AACTTTGAAAACTATAATTT+TGG | + | chr2_3:19081064-19081083 | Msa0282670:intron | 15.0% |
| !! | TTTAATATGTAACACATTTA+TGG | + | chr2_3:19081347-19081366 | Msa0282670:intron | 15.0% |
| !!! | ATATGTTTTTATTCTTGAAA+TGG | + | chr2_3:19081680-19081699 | Msa0282670:intron | 15.0% |
| !! | TACTAAACGTTAAAAAAAAA+AGG | - | chr2_3:19082655-19082674 | None:intergenic | 15.0% |
| !! | AAACAATTGATATATTTACA+AGG | - | chr2_3:19082836-19082855 | None:intergenic | 15.0% |
| !!! | ATTTTCTTCAATTAAAGTAA+CGG | + | chr2_3:19083079-19083098 | Msa0282670:intron | 15.0% |
| !! | ATATGAACTTATAAAGTATA+AGG | + | chr2_3:19083242-19083261 | Msa0282670:intron | 15.0% |
| !! | TATGAACTTATAAAGTATAA+GGG | + | chr2_3:19083243-19083262 | Msa0282670:intron | 15.0% |
| !!! | TACCAATTTTTTTTATGATA+TGG | + | chr2_3:19083346-19083365 | Msa0282670:intron | 15.0% |
| !! | AAAATTTACTCATAAACTAT+TGG | - | chr2_3:19084451-19084470 | None:intergenic | 15.0% |
| !!! | TCAGTATTATTTTATATGTA+AGG | - | chr2_3:19084525-19084544 | None:intergenic | 15.0% |
| !! | TTTAATATGTACTACATTTA+TGG | + | chr2_3:19084762-19084781 | Msa0282670:intron | 15.0% |
| !!! | GGTTTTTAATTTAAAACAGA+CGG | + | chr2_3:19079994-19080013 | Msa0282670:intron | 20.0% |
| !! | TTTGTAAGGATAATTAGTTA+GGG | + | chr2_3:19080058-19080077 | Msa0282670:intron | 20.0% |
| !!! | ATTGAGGGTTAATTATTTTT+TGG | - | chr2_3:19080134-19080153 | None:intergenic | 20.0% |
| !!! | AAGTTTTACTCATAAACTAT+TGG | - | chr2_3:19080575-19080594 | None:intergenic | 20.0% |
| !! | ATAAATTGTCTCTTGTAAAT+AGG | + | chr2_3:19080797-19080816 | Msa0282670:intron | 20.0% |
| !!! | ATTATAGTTTTCAAAGTTAG+GGG | - | chr2_3:19081062-19081081 | None:intergenic | 20.0% |
| !!! | AAGTATGTAAACTACAATTT+TGG | - | chr2_3:19081258-19081277 | None:intergenic | 20.0% |
| !! | AAATTGTAGTTTACATACTT+AGG | + | chr2_3:19081258-19081277 | Msa0282670:intron | 20.0% |
| !! | AATTGTAGTTTACATACTTA+GGG | + | chr2_3:19081259-19081278 | Msa0282670:intron | 20.0% |
| !!! | ATATTAAAACGCGTTTTTTT+TGG | - | chr2_3:19081335-19081354 | None:intergenic | 20.0% |
| !!! | AAACATATTTAAAGCTTAGT+AGG | - | chr2_3:19081668-19081687 | None:intergenic | 20.0% |
| !! | CTTTATTAAAACATTGCTAT+TGG | + | chr2_3:19081788-19081807 | Msa0282670:intron | 20.0% |
| !! | TAGTGAAACGTTAAAAAATA+AGG | + | chr2_3:19081821-19081840 | Msa0282670:intron | 20.0% |
| !! | AGTGAAACGTTAAAAAATAA+GGG | + | chr2_3:19081822-19081841 | Msa0282670:intron | 20.0% |
| !!! | CTGTAAAGTGTTTTTTAAAA+CGG | - | chr2_3:19082584-19082603 | None:intergenic | 20.0% |
| !! | AAACGTTAAAAAAAAAAGGA+AGG | - | chr2_3:19082651-19082670 | None:intergenic | 20.0% |
| !!! | TGTTTATTTTAAGTTCTGTT+TGG | + | chr2_3:19082851-19082870 | Msa0282670:intron | 20.0% |
| !!! | TAGTTGATAAATTAGCTTAT+AGG | + | chr2_3:19082891-19082910 | Msa0282670:intron | 20.0% |
| !!! | ATCATTTTTTCTTCCAATTT+TGG | - | chr2_3:19083107-19083126 | None:intergenic | 20.0% |
| !! | TACACATATTGAAATATAGT+GGG | - | chr2_3:19083422-19083441 | None:intergenic | 20.0% |
| !! | ATACACATATTGAAATATAG+TGG | - | chr2_3:19083423-19083442 | None:intergenic | 20.0% |
| !! | TTATTAGTCCATAAATTCAA+TGG | - | chr2_3:19084788-19084807 | None:intergenic | 20.0% |
| !!! | TTATGGACTAATAATTTCTT+AGG | + | chr2_3:19084794-19084813 | Msa0282670:intron | 20.0% |
| !! | TTTAATTTAAAACAGACGGA+AGG | + | chr2_3:19079998-19080017 | Msa0282670:intron | 25.0% |
| !! | TTAATTTAAAACAGACGGAA+GGG | + | chr2_3:19079999-19080018 | Msa0282670:intron | 25.0% |
| ! | AACTAATTATCCTTACAAAC+TGG | - | chr2_3:19080057-19080076 | None:intergenic | 25.0% |
| ! | GTTTGTAAGGATAATTAGTT+AGG | + | chr2_3:19080057-19080076 | Msa0282670:intron | 25.0% |
| ! | TTGTAAGGATAATTAGTTAG+GGG | + | chr2_3:19080059-19080078 | Msa0282670:intron | 25.0% |
| !! | CTAATTATGTGGTTTCATTT+TGG | - | chr2_3:19080086-19080105 | None:intergenic | 25.0% |
| ! | TGAAACCACATAATTAGTTA+AGG | + | chr2_3:19080089-19080108 | Msa0282670:intron | 25.0% |
| ! | GAAACCACATAATTAGTTAA+GGG | + | chr2_3:19080090-19080109 | Msa0282670:intron | 25.0% |
| ! | ATATTATATACTACTTCCTC+CGG | + | chr2_3:19080667-19080686 | Msa0282670:intron | 25.0% |
| ! | GTCAACTTTCTCTTATAAAT+AGG | - | chr2_3:19080694-19080713 | None:intergenic | 25.0% |
| ! | TTCATGCTGATAAAAAGATT+AGG | + | chr2_3:19080844-19080863 | Msa0282670:intron | 25.0% |
| !! | AAAATCCAAATCTTTTCTGA+AGG | - | chr2_3:19080898-19080917 | None:intergenic | 25.0% |
| !! | TTCAGAAAAGATTTGGATTT+TGG | + | chr2_3:19080897-19080916 | Msa0282670:intron | 25.0% |
| !!! | GCAACTTTTTAAAAGATAAG+GGG | - | chr2_3:19081030-19081049 | None:intergenic | 25.0% |
| !!! | CGCAACTTTTTAAAAGATAA+GGG | - | chr2_3:19081031-19081050 | None:intergenic | 25.0% |
| !!! | TCGCAACTTTTTAAAAGATA+AGG | - | chr2_3:19081032-19081051 | None:intergenic | 25.0% |
| !!! | CTTTTAAAAAGTTGCGATTT+TGG | + | chr2_3:19081035-19081054 | Msa0282670:intron | 25.0% |
| !! | TTATAGTTTTCAAAGTTAGG+GGG | - | chr2_3:19081061-19081080 | None:intergenic | 25.0% |
| !! | TTTTCAAAATGTTGCGATTA+TGG | - | chr2_3:19081163-19081182 | None:intergenic | 25.0% |
| !!! | GCAACATTTTGAAAAGATAA+GGG | + | chr2_3:19081168-19081187 | Msa0282670:intron | 25.0% |
| !!! | CAACATTTTGAAAAGATAAG+GGG | + | chr2_3:19081169-19081188 | Msa0282670:intron | 25.0% |
| ! | ATTGTAGTTTACATACTTAG+GGG | + | chr2_3:19081260-19081279 | Msa0282670:intron | 25.0% |
| ! | TTATTAGTCCATCAATTCAA+TGG | - | chr2_3:19081373-19081392 | None:intergenic | 25.0% |
| !!! | TGATGGACTAATAATTTCTT+TGG | + | chr2_3:19081379-19081398 | Msa0282670:intron | 25.0% |
| !!! | TGTTGATTCTACTAAGAAAT+GGG | + | chr2_3:19081576-19081595 | Msa0282670:CDS | 25.0% |
| ! | AAAAAGTGGTGTAATTGTAT+GGG | - | chr2_3:19081723-19081742 | None:intergenic | 25.0% |
| !! | TCCTTACAGTTTTTATTGTT+TGG | + | chr2_3:19081751-19081770 | Msa0282670:intron | 25.0% |
| ! | ACCAAACAATAAAAACTGTA+AGG | - | chr2_3:19081755-19081774 | None:intergenic | 25.0% |
| !!! | CAATGTTTTAATAAAGTGCA+GGG | - | chr2_3:19081784-19081803 | None:intergenic | 25.0% |
| ! | AAACGTTAAAAAATAAGGGA+AGG | + | chr2_3:19081826-19081845 | Msa0282670:intron | 25.0% |
| ! | AAAAAATAAGGGAAGGTTAA+CGG | + | chr2_3:19081833-19081852 | Msa0282670:intron | 25.0% |
| !! | ATTGGAGTTTTCAATTGAAT+AGG | + | chr2_3:19082207-19082226 | Msa0282670:intron | 25.0% |
| ! | AAAGAAAACAACGAACAATA+TGG | + | chr2_3:19082425-19082444 | Msa0282670:CDS | 25.0% |
| ! | AAAAAAAAAAGGAAGGCTAA+CGG | - | chr2_3:19082644-19082663 | None:intergenic | 25.0% |
| !! | TTTTAACGTTTAGTAACAGT+AGG | + | chr2_3:19082660-19082679 | Msa0282670:intron | 25.0% |
| ! | TTTAACGTTTAGTAACAGTA+GGG | + | chr2_3:19082661-19082680 | Msa0282670:intron | 25.0% |
| ! | CTTTATGAAAACATTGCTAT+TGG | - | chr2_3:19082688-19082707 | None:intergenic | 25.0% |
| ! | CACTTAAAGAAATTTCAAGA+AGG | - | chr2_3:19082796-19082815 | None:intergenic | 25.0% |
| ! | TTCAAGTAGCTTAAATCTAA+TGG | - | chr2_3:19083133-19083152 | None:intergenic | 25.0% |
| !!! | ATGACTAAAAAGTACTTGTT+TGG | - | chr2_3:19083224-19083243 | None:intergenic | 25.0% |
| !!! | GAAATTCGAAGGAAATTTTT+TGG | - | chr2_3:19083311-19083330 | None:intergenic | 25.0% |
| ! | GGCCATATCATAAAAAAAAT+TGG | - | chr2_3:19083351-19083370 | None:intergenic | 25.0% |
| ! | AGTAGAAAAAAATAAGATCG+TGG | + | chr2_3:19083660-19083679 | Msa0282670:intron | 25.0% |
| ! | GTTTCATGCTAAAGAAAATT+AGG | + | chr2_3:19084594-19084613 | Msa0282670:intron | 25.0% |
| ! | ATTTATGGCCATTGAATTTA+TGG | + | chr2_3:19084777-19084796 | Msa0282670:intron | 25.0% |
| ! | CTGTAGAGTTTATTATAGTT+GGG | - | chr2_3:19084858-19084877 | None:intergenic | 25.0% |
| !!! | TGTTGATTCTACTATGAAAT+GGG | + | chr2_3:19084987-19085006 | Msa0282670:CDS | 25.0% |
| TAGTCCCTTAACTAATTATG+TGG | - | chr2_3:19080097-19080116 | None:intergenic | 30.0% | |
| CATCAAAGATAGATGATTGA+GGG | - | chr2_3:19080149-19080168 | None:intergenic | 30.0% | |
| CTTTCTCTTATAAATAGGAC+CGG | - | chr2_3:19080689-19080708 | None:intergenic | 30.0% | |
| !!! | TTTTTTACTAAGTCAAGGCT+CGG | - | chr2_3:19080984-19081003 | None:intergenic | 30.0% |
| AAAAAGCTAAAGTGCAACTT+TGG | + | chr2_3:19081004-19081023 | Msa0282670:intron | 30.0% | |
| !! | CGCAACATTTTGAAAAGATA+AGG | + | chr2_3:19081167-19081186 | Msa0282670:intron | 30.0% |
| AGACATATTTCCCTTAAGTT+AGG | + | chr2_3:19081197-19081216 | Msa0282670:intron | 30.0% | |
| GACATATTTCCCTTAAGTTA+GGG | + | chr2_3:19081198-19081217 | Msa0282670:intron | 30.0% | |
| ACATATTTCCCTTAAGTTAG+GGG | + | chr2_3:19081199-19081218 | Msa0282670:intron | 30.0% | |
| TTGTAGTTTACATACTTAGG+GGG | + | chr2_3:19081261-19081280 | Msa0282670:intron | 30.0% | |
| !! | ATCGCAACTTTTTGAAAGAT+AGG | + | chr2_3:19081289-19081308 | Msa0282670:intron | 30.0% |
| !! | TCGCAACTTTTTGAAAGATA+GGG | + | chr2_3:19081290-19081309 | Msa0282670:intron | 30.0% |
| ATTTATGGCCATTGAATTGA+TGG | + | chr2_3:19081362-19081381 | Msa0282670:intron | 30.0% | |
| TAGAGTTTATAGTTGGGATT+AGG | - | chr2_3:19081468-19081487 | None:intergenic | 30.0% | |
| !! | ATCAGACAATTTTGATACAC+AGG | + | chr2_3:19081534-19081553 | Msa0282670:intron | 30.0% |
| !! | GTGTTGATTCTACTAAGAAA+TGG | + | chr2_3:19081575-19081594 | Msa0282670:CDS | 30.0% |
| ! | GTAGGAGTATATACATGAAA+AGG | - | chr2_3:19081650-19081669 | None:intergenic | 30.0% |
| CAAAAAGTGGTGTAATTGTA+TGG | - | chr2_3:19081724-19081743 | None:intergenic | 30.0% | |
| !! | CATACAATTACACCACTTTT+TGG | + | chr2_3:19081722-19081741 | Msa0282670:intron | 30.0% |
| !!! | ATTACACCACTTTTTGGTTT+TGG | + | chr2_3:19081728-19081747 | Msa0282670:intron | 30.0% |
| !!! | GCAATGTTTTAATAAAGTGC+AGG | - | chr2_3:19081785-19081804 | None:intergenic | 30.0% |
| TTAACGTTTCACTAACAGTA+GGG | - | chr2_3:19081815-19081834 | None:intergenic | 30.0% | |
| TTTAACGTTTCACTAACAGT+AGG | - | chr2_3:19081816-19081835 | None:intergenic | 30.0% | |
| AATTTAAAGACAATCGCACA+AGG | - | chr2_3:19082039-19082058 | None:intergenic | 30.0% | |
| CTAATTTAGAGGTTTCAATC+AGG | - | chr2_3:19082073-19082092 | None:intergenic | 30.0% | |
| GAATGCTTGAACTAATTTAG+AGG | - | chr2_3:19082084-19082103 | None:intergenic | 30.0% | |
| TTAGTATGCTTTCATCGTAT+GGG | - | chr2_3:19082176-19082195 | None:intergenic | 30.0% | |
| TTTAGTATGCTTTCATCGTA+TGG | - | chr2_3:19082177-19082196 | None:intergenic | 30.0% | |
| ! | ATACGATGAAAGCATACTAA+AGG | + | chr2_3:19082176-19082195 | Msa0282670:intron | 30.0% |
| ! | TACGATGAAAGCATACTAAA+GGG | + | chr2_3:19082177-19082196 | Msa0282670:intron | 30.0% |
| ! | GAGTTTTCAATTGAATAGGT+TGG | + | chr2_3:19082211-19082230 | Msa0282670:intron | 30.0% |
| !! | TTCTAAAATTGCAGAATCCA+TGG | + | chr2_3:19082358-19082377 | Msa0282670:intron | 30.0% |
| TTTAATCTTCATCATCACCA+TGG | - | chr2_3:19082378-19082397 | None:intergenic | 30.0% | |
| AAACAACGAACAATATGGAT+TGG | + | chr2_3:19082430-19082449 | Msa0282670:CDS | 30.0% | |
| AACAACGAACAATATGGATT+GGG | + | chr2_3:19082431-19082450 | Msa0282670:CDS | 30.0% | |
| ! | CAATGTTTTCATAAAGTGCA+GGG | + | chr2_3:19082692-19082711 | Msa0282670:intron | 30.0% |
| !! | CAGTTTTTATCGTTTGGTTT+CGG | - | chr2_3:19082719-19082738 | None:intergenic | 30.0% |
| !!! | ATTACACCACTTTTTGGTTA+TGG | - | chr2_3:19082748-19082767 | None:intergenic | 30.0% |
| TTGATTGAGTTTGCAGTATT+TGG | + | chr2_3:19082988-19083007 | Msa0282670:intron | 30.0% | |
| TAAAGTAACGGTTCCAAAAT+TGG | + | chr2_3:19083091-19083110 | Msa0282670:intron | 30.0% | |
| AAAATGTGAGAGAAATTCGA+AGG | - | chr2_3:19083322-19083341 | None:intergenic | 30.0% | |
| ! | CATATTGAAATATAGTGGGA+TGG | - | chr2_3:19083418-19083437 | None:intergenic | 30.0% |
| CCTAAAAGAGTTCAACTTTA+CGG | - | chr2_3:19083490-19083509 | None:intergenic | 30.0% | |
| ! | CGTAAAGTTGAACTCTTTTA+GGG | + | chr2_3:19083488-19083507 | Msa0282670:intron | 30.0% |
| ATGAAAGAGAAATAGAGAGA+TGG | + | chr2_3:19080197-19080216 | Msa0282670:intron | 30.0% | |
| !!! | ACTTGGAGTAGTTTTATGAT+GGG | - | chr2_3:19083828-19083847 | None:intergenic | 30.0% |
| ! | AACAAGATGCATCTTCTTTT+CGG | - | chr2_3:19083890-19083909 | None:intergenic | 30.0% |
| AAGATGCATCTTGTTGATAT+GGG | + | chr2_3:19083895-19083914 | Msa0282670:intron | 30.0% | |
| ! | GTTGGCTTATAAGAATTGTT+AGG | - | chr2_3:19083926-19083945 | None:intergenic | 30.0% |
| ! | TTTTACTAAGTCAAGGTTCT+AGG | - | chr2_3:19084734-19084753 | None:intergenic | 30.0% |
| GCTGTAGAGTTTATTATAGT+TGG | - | chr2_3:19084859-19084878 | None:intergenic | 30.0% | |
| ! | TTGTCTGATGATGTGTAAAA+AGG | - | chr2_3:19084922-19084941 | None:intergenic | 30.0% |
| !! | ATCAGACAATTTTGATACAC+AGG | + | chr2_3:19081534-19081553 | Msa0282670:intron | 30.0% |
| !! | GTGTTGATTCTACTATGAAA+TGG | + | chr2_3:19084986-19085005 | Msa0282670:CDS | 30.0% |
| ! | GTTGATTCTACTATGAAATG+GGG | + | chr2_3:19084988-19085007 | Msa0282670:CDS | 30.0% |
| ! | AAAACCGTTAAGTTGTGATG+AGG | - | chr2_3:19079980-19079999 | None:intergenic | 35.0% |
| CCATCAAAGATAGATGATTG+AGG | - | chr2_3:19080150-19080169 | None:intergenic | 35.0% | |
| CCTCAATCATCTATCTTTGA+TGG | + | chr2_3:19080147-19080166 | Msa0282670:intron | 35.0% | |
| GAAAGAGAAATAGAGAGAGA+TGG | + | chr2_3:19080199-19080218 | Msa0282670:intron | 35.0% | |
| ! | AGATGCATTCTTCTTGTTTG+TGG | + | chr2_3:19080288-19080307 | Msa0282670:intron | 35.0% |
| ! | TCTTGTTTGTGGTTTCTTGT+TGG | + | chr2_3:19080299-19080318 | Msa0282670:intron | 35.0% |
| TTGTCTCTTGTAAATAGGAC+TGG | + | chr2_3:19080802-19080821 | Msa0282670:intron | 35.0% | |
| ACCTTCCTTCAGAAAAGATT+TGG | + | chr2_3:19080890-19080909 | Msa0282670:intron | 35.0% | |
| !! | TCCAAATCTTTTCTGAAGGA+AGG | - | chr2_3:19080894-19080913 | None:intergenic | 35.0% |
| ! | TCAGCAGTTTTCAAAGTTAG+GGG | - | chr2_3:19081091-19081110 | None:intergenic | 35.0% |
| ! | CTCAGCAGTTTTCAAAGTTA+GGG | - | chr2_3:19081092-19081111 | None:intergenic | 35.0% |
| ! | TCTCAGCAGTTTTCAAAGTT+AGG | - | chr2_3:19081093-19081112 | None:intergenic | 35.0% |
| ! | AACTTTGAAAACTGCTGAGA+AGG | + | chr2_3:19081093-19081112 | Msa0282670:intron | 35.0% |
| !!! | TTCAAAATGGCCCCTTTTTT+TGG | - | chr2_3:19081129-19081148 | None:intergenic | 35.0% |
| !! | GGGCCATTTTGAAAAGATAA+GGG | + | chr2_3:19081136-19081155 | Msa0282670:intron | 35.0% |
| !! | GGCCATTTTGAAAAGATAAG+GGG | + | chr2_3:19081137-19081156 | Msa0282670:intron | 35.0% |
| CATATTTCCCTTAAGTTAGG+GGG | + | chr2_3:19081200-19081219 | Msa0282670:intron | 35.0% | |
| ! | CTTTTAACCCCCTAACTTAA+GGG | - | chr2_3:19081210-19081229 | None:intergenic | 35.0% |
| ! | TCTTTTAACCCCCTAACTTA+AGG | - | chr2_3:19081211-19081230 | None:intergenic | 35.0% |
| AGAGCATATTTCCCTAAACA+TGG | + | chr2_3:19081228-19081247 | Msa0282670:intron | 35.0% | |
| GAGCATATTTCCCTAAACAT+GGG | + | chr2_3:19081229-19081248 | Msa0282670:intron | 35.0% | |
| AGCATATTTCCCTAAACATG+GGG | + | chr2_3:19081230-19081249 | Msa0282670:intron | 35.0% | |
| !! | CGCAACTTTTTGAAAGATAG+GGG | + | chr2_3:19081291-19081310 | Msa0282670:intron | 35.0% |
| !! | GCAACTTTTTGAAAGATAGG+GGG | + | chr2_3:19081292-19081311 | Msa0282670:intron | 35.0% |
| !! | TTTTGGCTAAAGTGCAACTT+TGG | - | chr2_3:19081318-19081337 | None:intergenic | 35.0% |
| GCTTCGTAGAGTTTATAGTT+GGG | - | chr2_3:19081474-19081493 | None:intergenic | 35.0% | |
| AGCTTCGTAGAGTTTATAGT+TGG | - | chr2_3:19081475-19081494 | None:intergenic | 35.0% | |
| ! | ATCAAAATTGTCTGATGACG+TGG | - | chr2_3:19081530-19081549 | None:intergenic | 35.0% |
| TAAGGACCAAAACCAAAAAG+TGG | - | chr2_3:19081737-19081756 | None:intergenic | 35.0% | |
| CCACATGGTGTATAATCATA+GGG | + | chr2_3:19081860-19081879 | Msa0282670:intron | 35.0% | |
| AATCACGTTCAACGAGAATA+TGG | - | chr2_3:19081977-19081996 | None:intergenic | 35.0% | |
| ! | ACGATGAAAGCATACTAAAG+GGG | + | chr2_3:19082178-19082197 | Msa0282670:intron | 35.0% |
| !! | CAATTGAATAGGTTGGTTCA+TGG | + | chr2_3:19082218-19082237 | Msa0282670:intron | 35.0% |
| TGGATTGTTGAGATTGTGAA+AGG | + | chr2_3:19082254-19082273 | Msa0282670:intron | 35.0% | |
| TCACGAATTTCTGCTGAAAT+CGG | - | chr2_3:19082293-19082312 | None:intergenic | 35.0% | |
| TTTCAGCAGAAATTCGTGAT+TGG | + | chr2_3:19082294-19082313 | Msa0282670:intron | 35.0% | |
| AGATGACGAAGGAGATAAAA+TGG | + | chr2_3:19082485-19082504 | Msa0282670:intron | 35.0% | |
| ! | GCAATGTTTTCATAAAGTGC+AGG | + | chr2_3:19082691-19082710 | Msa0282670:intron | 35.0% |
| AACCAAACGATAAAAACTGC+AGG | + | chr2_3:19082720-19082739 | Msa0282670:intron | 35.0% | |
| ACCAAACGATAAAAACTGCA+GGG | + | chr2_3:19082721-19082740 | Msa0282670:intron | 35.0% | |
| ! | AAGCTAGCTTACACTTATAG+CGG | + | chr2_3:19082955-19082974 | Msa0282670:intron | 35.0% |
| TGATATTTATGGTCTCATCG+AGG | - | chr2_3:19083372-19083391 | None:intergenic | 35.0% | |
| ! | GTCAATGAAGTTGACTTAGT+TGG | + | chr2_3:19083448-19083467 | Msa0282670:intron | 35.0% |
| ! | CCGTAAAGTTGAACTCTTTT+AGG | + | chr2_3:19083487-19083506 | Msa0282670:intron | 35.0% |
| !! | AAAGTTGAACTCTTTTAGGG+AGG | + | chr2_3:19083491-19083510 | Msa0282670:intron | 35.0% |
| !! | AAGTTGAACTCTTTTAGGGA+GGG | + | chr2_3:19083492-19083511 | Msa0282670:intron | 35.0% |
| GACTATTTAAGCTTGGAACA+AGG | + | chr2_3:19083528-19083547 | Msa0282670:intron | 35.0% | |
| TACTATTTACCATGAGCAAC+GGG | - | chr2_3:19083602-19083621 | None:intergenic | 35.0% | |
| CTACTATTTACCATGAGCAA+CGG | - | chr2_3:19083603-19083622 | None:intergenic | 35.0% | |
| TAATCCTCATCTCTCTTTGA+TGG | + | chr2_3:19083633-19083652 | Msa0282670:intron | 35.0% | |
| !!! | GACTTGGAGTAGTTTTATGA+TGG | - | chr2_3:19083829-19083848 | None:intergenic | 35.0% |
| GAAGATGCATCTTGTTGATA+TGG | + | chr2_3:19083894-19083913 | Msa0282670:intron | 35.0% | |
| ! | AACTTGCCTTGTCATTTCAA+TGG | + | chr2_3:19084498-19084517 | Msa0282670:intron | 35.0% |
| TAAGGTCCATTGAAATGACA+AGG | - | chr2_3:19084507-19084526 | None:intergenic | 35.0% | |
| ACCTTCCTTCAGAAAAGATT+TGG | + | chr2_3:19080890-19080909 | Msa0282670:intron | 35.0% | |
| !! | TCCAAATCTTTTCTGAAGGA+AGG | - | chr2_3:19080894-19080913 | None:intergenic | 35.0% |
| CAACAAAGTTGAGATGATGA+AGG | + | chr2_3:19080934-19080953 | Msa0282670:intron | 35.0% | |
| !!! | CGCGTTTTTTTACTAAGTCA+AGG | - | chr2_3:19084741-19084760 | None:intergenic | 35.0% |
| ! | CTTTAAGCTTTGTACAGGAA+AGG | - | chr2_3:19084881-19084900 | None:intergenic | 35.0% |
| TCCTGTACAAAGCTTAAAGA+AGG | + | chr2_3:19084882-19084901 | Msa0282670:intron | 35.0% | |
| ! | TCCTTCTTTAAGCTTTGTAC+AGG | - | chr2_3:19084886-19084905 | None:intergenic | 35.0% |
| ! | CTGATGATGTGTAAAAAGGA+AGG | - | chr2_3:19084918-19084937 | None:intergenic | 35.0% |
| AACTTGCCTCGTCATTTCAA+TGG | + | chr2_3:19080590-19080609 | Msa0282670:intron | 40.0% | |
| TAAGGTCCATTGAAATGACG+AGG | - | chr2_3:19080599-19080618 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr2_3:19080686-19080705 | None:intergenic | 40.0% | |
| TCTCTTGTAAATAGGACTGG+AGG | + | chr2_3:19080805-19080824 | Msa0282670:intron | 40.0% | |
| CTCTTGTAAATAGGACTGGA+GGG | + | chr2_3:19080806-19080825 | Msa0282670:intron | 40.0% | |
| ! | CAGCAGTTTTCAAAGTTAGG+GGG | - | chr2_3:19081090-19081109 | None:intergenic | 40.0% |
| !! | GGGGCCATTTTGAAAAGATA+AGG | + | chr2_3:19081135-19081154 | Msa0282670:intron | 40.0% |
| ! | GGCCCCTTATCTTTTCAAAA+TGG | - | chr2_3:19081142-19081161 | None:intergenic | 40.0% |
| GCATATTTCCCTAAACATGG+GGG | + | chr2_3:19081231-19081250 | Msa0282670:intron | 40.0% | |
| !! | ATTTTGGTCCCCCATGTTTA+GGG | - | chr2_3:19081242-19081261 | None:intergenic | 40.0% |
| !! | AATTTTGGTCCCCCATGTTT+AGG | - | chr2_3:19081243-19081262 | None:intergenic | 40.0% |
| ! | ATTGTCTGATGACGTGGAAA+AGG | - | chr2_3:19081524-19081543 | None:intergenic | 40.0% |
| GCCACATGGTGTATAATCAT+AGG | + | chr2_3:19081859-19081878 | Msa0282670:intron | 40.0% | |
| CCCTATGATTATACACCATG+TGG | - | chr2_3:19081863-19081882 | None:intergenic | 40.0% | |
| ! | TTGCAGGCTGATTGATTTAC+TGG | + | chr2_3:19081996-19082015 | Msa0282670:intron | 40.0% |
| TTAAAGACAATCGCACAAGG+AGG | - | chr2_3:19082036-19082055 | None:intergenic | 40.0% | |
| GCGAGTTTCGATTAAGCTAT+CGG | - | chr2_3:19082139-19082158 | None:intergenic | 40.0% | |
| ! | TGAAAGCATACTAAAGGGGA+CGG | + | chr2_3:19082182-19082201 | Msa0282670:intron | 40.0% |
| !! | TTGAATAGGTTGGTTCATGG+TGG | + | chr2_3:19082221-19082240 | Msa0282670:intron | 40.0% |
| TTCATGGTGGCAATTTCAAC+TGG | + | chr2_3:19082234-19082253 | Msa0282670:intron | 40.0% | |
| CACGAATTTCTGCTGAAATC+GGG | - | chr2_3:19082292-19082311 | None:intergenic | 40.0% | |
| !! | AACGAACAATATGGATTGGG+TGG | + | chr2_3:19082434-19082453 | Msa0282670:CDS | 40.0% |
| ! | TGGTGATGAAGAAAACGTGA+CGG | + | chr2_3:19082454-19082473 | Msa0282670:CDS | 40.0% |
| CGGTGATTTAAAGATGACGA+AGG | + | chr2_3:19082474-19082493 | Msa0282670:intron | 40.0% | |
| TGACGAAGGAGATAAAATGG+TGG | + | chr2_3:19082488-19082507 | Msa0282670:intron | 40.0% | |
| ! | AGGAGATAAAATGGTGGTGA+TGG | + | chr2_3:19082494-19082513 | Msa0282670:intron | 40.0% |
| ! | TCCCTGCAGTTTTTATCGTT+TGG | - | chr2_3:19082725-19082744 | None:intergenic | 40.0% |
| !! | GCTGCAATTACACCACTTTT+TGG | - | chr2_3:19082754-19082773 | None:intergenic | 40.0% |
| !!! | TTTTTTGGACACCAAGAGTC+TGG | - | chr2_3:19083296-19083315 | None:intergenic | 40.0% |
| !! | AGTTGAACTCTTTTAGGGAG+GGG | + | chr2_3:19083493-19083512 | Msa0282670:intron | 40.0% |
| !! | GTGCGTTGACTATTTAAGCT+TGG | + | chr2_3:19083521-19083540 | Msa0282670:intron | 40.0% |
| TCATCCATCAAAGAGAGATG+AGG | - | chr2_3:19083640-19083659 | None:intergenic | 40.0% | |
| !! | TAACATCCCAGACTGCTTTT+AGG | + | chr2_3:19083712-19083731 | Msa0282670:intron | 40.0% |
| !! | AAAGACTCGTGTTGGTTTGT+GGG | - | chr2_3:19083751-19083770 | None:intergenic | 40.0% |
| !! | AAAAGACTCGTGTTGGTTTG+TGG | - | chr2_3:19083752-19083771 | None:intergenic | 40.0% |
| !!! | TTTTATGATGGGTGACCTAC+CGG | - | chr2_3:19083817-19083836 | None:intergenic | 40.0% |
| GCTTAACTGTGGAGTTCTTA+TGG | + | chr2_3:19083855-19083874 | Msa0282670:intron | 40.0% | |
| TTCGGCTCCTCTTATTAATG+TGG | + | chr2_3:19084004-19084023 | Msa0282670:CDS | 40.0% | |
| TCGGCTCCTCTTATTAATGT+GGG | + | chr2_3:19084005-19084024 | Msa0282670:CDS | 40.0% | |
| GATGACCCCACATTAATAAG+AGG | - | chr2_3:19084014-19084033 | None:intergenic | 40.0% | |
| TTAATGTGGGGTCATCCTTA+CGG | + | chr2_3:19084018-19084037 | Msa0282670:CDS | 40.0% | |
| ! | GCATTCTTCTTGTGACTTGT+TGG | + | chr2_3:19084204-19084223 | Msa0282670:intron | 40.0% |
| ! | GCAGTCCAAATCTTTTCTGA+AGG | - | chr2_3:19084655-19084674 | None:intergenic | 40.0% |
| TGAAGAAGGAAAGGAACGAC+AGG | + | chr2_3:19079876-19079895 | Msa0282670:CDS | 45.0% | |
| GCCACCTCATCACAACTTAA+CGG | + | chr2_3:19079973-19079992 | Msa0282670:CDS | 45.0% | |
| ! | ACCGTTAAGTTGTGATGAGG+TGG | - | chr2_3:19079977-19079996 | None:intergenic | 45.0% |
| GAAGGGACTTAACTGATGGA+CGG | + | chr2_3:19080016-19080035 | Msa0282670:intron | 45.0% | |
| GCGACACGTGTCCAAAAAAA+GGG | + | chr2_3:19081115-19081134 | Msa0282670:intron | 45.0% | |
| CGACACGTGTCCAAAAAAAG+GGG | + | chr2_3:19081116-19081135 | Msa0282670:intron | 45.0% | |
| ! | TCTGATGACGTGGAAAAGGA+AGG | - | chr2_3:19081520-19081539 | None:intergenic | 45.0% |
| TGGGCTGTAGCAGAATTTGT+AGG | + | chr2_3:19081595-19081614 | Msa0282670:CDS | 45.0% | |
| TGTATAATCATAGGGCCACG+TGG | + | chr2_3:19081868-19081887 | Msa0282670:intron | 45.0% | |
| ! | AACACTTTTACAGTGCCACG+TGG | - | chr2_3:19081886-19081905 | None:intergenic | 45.0% |
| ! | TCTCGTTGAACGTGATTTGC+AGG | + | chr2_3:19081980-19081999 | Msa0282670:intron | 45.0% |
| ! | AGAGGGAGTTTGGAACAGAA+AGG | - | chr2_3:19082106-19082125 | None:intergenic | 45.0% |
| ATTAAGCTATCGGCGACTGA+CGG | - | chr2_3:19082129-19082148 | None:intergenic | 45.0% | |
| TTTCATCGTATGGGTGGTTG+AGG | - | chr2_3:19082167-19082186 | None:intergenic | 45.0% | |
| GTATGCTTTCATCGTATGGG+TGG | - | chr2_3:19082173-19082192 | None:intergenic | 45.0% | |
| ATACTAAAGGGGACGGAGAT+TGG | + | chr2_3:19082189-19082208 | Msa0282670:intron | 45.0% | |
| AAACACTTTACAGTGCCACG+TGG | + | chr2_3:19082591-19082610 | Msa0282670:intron | 45.0% | |
| CCACGTGGCGTACAATTATT+GGG | - | chr2_3:19082617-19082636 | None:intergenic | 45.0% | |
| CAGGGACCATAACCAAAAAG+TGG | + | chr2_3:19082739-19082758 | Msa0282670:intron | 45.0% | |
| GCGAATGAGCTTAGAGTGAT+TGG | + | chr2_3:19082927-19082946 | Msa0282670:intron | 45.0% | |
| TGTCTTAGCAACCAGACTCT+TGG | + | chr2_3:19083282-19083301 | Msa0282670:intron | 45.0% | |
| GGCAATCCTAAAAGCAGTCT+GGG | - | chr2_3:19083721-19083740 | None:intergenic | 45.0% | |
| !! | TGTTGGTTTGTGGGGTTAGT+CGG | - | chr2_3:19083742-19083761 | None:intergenic | 45.0% |
| !! | AAGACTCGTGTTGGTTTGTG+GGG | - | chr2_3:19083750-19083769 | None:intergenic | 45.0% |
| CATGCTGAAAAGACTCGTGT+TGG | - | chr2_3:19083759-19083778 | None:intergenic | 45.0% | |
| !! | TTTATGATGGGTGACCTACC+GGG | - | chr2_3:19083816-19083835 | None:intergenic | 45.0% |
| ACAGTTAAGCGTGCTTGACT+TGG | - | chr2_3:19083845-19083864 | None:intergenic | 45.0% | |
| AAGTCAAGCACGCTTAACTG+TGG | + | chr2_3:19083844-19083863 | Msa0282670:intron | 45.0% | |
| GTATGGGACTACATGGTTGA+AGG | - | chr2_3:19083948-19083967 | None:intergenic | 45.0% | |
| TGTGTAGGTATGGGACTACA+TGG | - | chr2_3:19083955-19083974 | None:intergenic | 45.0% | |
| CGAATCACATCGGAATGAGA+GGG | - | chr2_3:19083988-19084007 | None:intergenic | 45.0% | |
| CCTCTCATTCCGATGTGATT+CGG | + | chr2_3:19083986-19084005 | Msa0282670:CDS | 45.0% | |
| TAAGAGGAGCCGAATCACAT+CGG | - | chr2_3:19083998-19084017 | None:intergenic | 45.0% | |
| CGGCTCCTCTTATTAATGTG+GGG | + | chr2_3:19084006-19084025 | Msa0282670:CDS | 45.0% | |
| AACCTTTCGTATCCAACTGG+CGG | + | chr2_3:19084065-19084084 | Msa0282670:CDS | 45.0% | |
| TGGGGAGTAACAGAATCTGT+AGG | + | chr2_3:19085006-19085025 | Msa0282670:CDS | 45.0% | |
| !! | AAATAATTTATGTATTTAAT+TGG | - | chr2_3:19080763-19080782 | None:intergenic | 5.0% |
| !!! | GTAAATTTTTTTTTTTTTTT+AGG | + | chr2_3:19084462-19084481 | Msa0282670:intron | 5.0% |
| !! | GCAAGTGTGGGTTGGGAATA+AGG | - | chr2_3:19079955-19079974 | None:intergenic | 50.0% |
| TGTGATGAGGTGGCAAGTGT+GGG | - | chr2_3:19079967-19079986 | None:intergenic | 50.0% | |
| TTGTGATGAGGTGGCAAGTG+TGG | - | chr2_3:19079968-19079987 | None:intergenic | 50.0% | |
| GACGGAAGGGACTTAACTGA+TGG | + | chr2_3:19080012-19080031 | Msa0282670:intron | 50.0% | |
| ! | TGATGGACGGAACAGACTTG+CGG | + | chr2_3:19080029-19080048 | Msa0282670:intron | 50.0% |
| ACTTGCGGGACCAGTTTGTA+AGG | + | chr2_3:19080044-19080063 | Msa0282670:intron | 50.0% | |
| GGCGACACGTGTCCAAAAAA+AGG | + | chr2_3:19081114-19081133 | Msa0282670:intron | 50.0% | |
| ! | AAGGTTAACGGAGTGCCACA+TGG | + | chr2_3:19081845-19081864 | Msa0282670:intron | 50.0% |
| CGTACAATTATTGGGCCACG+TGG | - | chr2_3:19082609-19082628 | None:intergenic | 50.0% | |
| CCCAATAATTGTACGCCACG+TGG | + | chr2_3:19082614-19082633 | Msa0282670:intron | 50.0% | |
| GCCACGTGGCGTACAATTAT+TGG | - | chr2_3:19082618-19082637 | None:intergenic | 50.0% | |
| ! | GATTTTGCTCGATCCTCCGT+CGG | + | chr2_3:19083569-19083588 | Msa0282670:CDS | 50.0% |
| CGGCAATCCTAAAAGCAGTC+TGG | - | chr2_3:19083722-19083741 | None:intergenic | 50.0% | |
| ATGCTTACCGGGAAACTTCC+CGG | + | chr2_3:19083795-19083814 | Msa0282670:CDS | 50.0% | |
| GGGACTACATGGTTGAAGGT+TGG | - | chr2_3:19083944-19083963 | None:intergenic | 50.0% | |
| ACATCGGAATGAGAGGGATC+CGG | - | chr2_3:19083982-19084001 | None:intergenic | 50.0% | |
| CCGAATCACATCGGAATGAG+AGG | - | chr2_3:19083989-19084008 | None:intergenic | 50.0% | |
| GGCAACCTTTCGTATCCAAC+TGG | + | chr2_3:19084062-19084081 | Msa0282670:CDS | 50.0% | |
| ACCTTTCGTATCCAACTGGC+GGG | + | chr2_3:19084066-19084085 | Msa0282670:CDS | 50.0% | |
| GATATCGAAAGCCACGTCGT+GGG | + | chr2_3:19084088-19084107 | Msa0282670:CDS | 50.0% | |
| TGAGGTGGCAAGTGTGGGTT+GGG | - | chr2_3:19079962-19079981 | None:intergenic | 55.0% | |
| ATGAGGTGGCAAGTGTGGGT+TGG | - | chr2_3:19079963-19079982 | None:intergenic | 55.0% | |
| GATGGACGGAACAGACTTGC+GGG | + | chr2_3:19080030-19080049 | Msa0282670:intron | 55.0% | |
| GTCCTCACTCGCATGCTTAC+CGG | + | chr2_3:19083783-19083802 | Msa0282670:CDS | 55.0% | |
| TCCTCACTCGCATGCTTACC+GGG | + | chr2_3:19083784-19083803 | Msa0282670:CDS | 55.0% | |
| TTACCGGGAAACTTCCCGGT+AGG | + | chr2_3:19083799-19083818 | Msa0282670:intron | 55.0% | |
| TGACCTACCGGGAAGTTTCC+CGG | - | chr2_3:19083805-19083824 | None:intergenic | 55.0% | |
| TCCCATACCTACACAGCCTC+CGG | + | chr2_3:19083960-19083979 | Msa0282670:CDS | 55.0% | |
| TCCGGAGGCTGTGTAGGTAT+GGG | - | chr2_3:19083964-19083983 | None:intergenic | 55.0% | |
| ATCCGGAGGCTGTGTAGGTA+TGG | - | chr2_3:19083965-19083984 | None:intergenic | 55.0% | |
| TGGAACGGGCACTATCCGTA+AGG | - | chr2_3:19084036-19084055 | None:intergenic | 55.0% | |
| ATAGTGCCCGTTCCAACTGG+CGG | + | chr2_3:19084041-19084060 | Msa0282670:CDS | 55.0% | |
| AAGGTTGCCGCCAGTTGGAA+CGG | - | chr2_3:19084051-19084070 | None:intergenic | 55.0% | |
| TACGAAAGGTTGCCGCCAGT+TGG | - | chr2_3:19084056-19084075 | None:intergenic | 55.0% | |
| TCCCGCCAGTTGGATACGAA+AGG | - | chr2_3:19084070-19084089 | None:intergenic | 55.0% | |
| GCTTTCGATATCCCGCCAGT+TGG | - | chr2_3:19084080-19084099 | None:intergenic | 55.0% | |
| GGATATCGAAAGCCACGTCG+TGG | + | chr2_3:19084087-19084106 | Msa0282670:CDS | 55.0% | |
| ATGCTGTAACACCCACGACG+TGG | - | chr2_3:19084102-19084121 | None:intergenic | 55.0% | |
| CGACTGACGGAGAGGGAGTT+TGG | - | chr2_3:19082116-19082135 | None:intergenic | 60.0% | |
| CTATCGGCGACTGACGGAGA+GGG | - | chr2_3:19082123-19082142 | None:intergenic | 60.0% | |
| ! | AAGGCTAACGGAGTGCCACG+TGG | - | chr2_3:19082632-19082651 | None:intergenic | 60.0% |
| AGCAACGGGCAAAGCTCCGA+CGG | - | chr2_3:19083588-19083607 | None:intergenic | 60.0% | |
| GGAGCTTTGCCCGTTGCTCA+TGG | + | chr2_3:19083590-19083609 | Msa0282670:CDS | 60.0% | |
| TCCCGGTAAGCATGCGAGTG+AGG | - | chr2_3:19083788-19083807 | None:intergenic | 60.0% | |
| TCGGAATGAGAGGGATCCGG+AGG | - | chr2_3:19083979-19083998 | None:intergenic | 60.0% | |
| CGGATAGTGCCCGTTCCAAC+TGG | + | chr2_3:19084038-19084057 | Msa0282670:CDS | 60.0% | |
| AGGTTGCCGCCAGTTGGAAC+GGG | - | chr2_3:19084050-19084069 | None:intergenic | 60.0% | |
| GCTATCGGCGACTGACGGAG+AGG | - | chr2_3:19082124-19082143 | None:intergenic | 65.0% | |
| AACGGGCAAAGCTCCGACGG+AGG | - | chr2_3:19083585-19083604 | None:intergenic | 65.0% | |
| GAGGGATCCGGAGGCTGTGT+AGG | - | chr2_3:19083970-19083989 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 19079875 | 19085041 | 19079875 | ID=Msa0282670;Name=Msa0282670 |
| chr2_3 | mRNA | 19079875 | 19085041 | 19079875 | ID=Msa0282670-mRNA-1;Parent=Msa0282670;Name=Msa0282670-mRNA-1;_AED=0.93;_eAED=0.94;_QI=0|0|0|0.14|1|1|7|0|212 |
| chr2_3 | exon | 19079875 | 19079994 | 19079875 | ID=Msa0282670-mRNA-1:exon:7709;Parent=Msa0282670-mRNA-1 |
| chr2_3 | exon | 19081556 | 19081626 | 19081556 | ID=Msa0282670-mRNA-1:exon:7710;Parent=Msa0282670-mRNA-1 |
| chr2_3 | exon | 19082421 | 19082475 | 19082421 | ID=Msa0282670-mRNA-1:exon:7711;Parent=Msa0282670-mRNA-1 |
| chr2_3 | exon | 19083539 | 19083611 | 19083539 | ID=Msa0282670-mRNA-1:exon:7712;Parent=Msa0282670-mRNA-1 |
| chr2_3 | exon | 19083734 | 19083816 | 19083734 | ID=Msa0282670-mRNA-1:exon:7713;Parent=Msa0282670-mRNA-1 |
| chr2_3 | exon | 19083960 | 19084109 | 19083960 | ID=Msa0282670-mRNA-1:exon:7714;Parent=Msa0282670-mRNA-1 |
| chr2_3 | exon | 19084955 | 19085041 | 19084955 | ID=Msa0282670-mRNA-1:exon:7715;Parent=Msa0282670-mRNA-1 |
| chr2_3 | CDS | 19079875 | 19079994 | 19079875 | ID=Msa0282670-mRNA-1:cds;Parent=Msa0282670-mRNA-1 |
| chr2_3 | CDS | 19081556 | 19081626 | 19081556 | ID=Msa0282670-mRNA-1:cds;Parent=Msa0282670-mRNA-1 |
| chr2_3 | CDS | 19082421 | 19082475 | 19082421 | ID=Msa0282670-mRNA-1:cds;Parent=Msa0282670-mRNA-1 |
| chr2_3 | CDS | 19083539 | 19083611 | 19083539 | ID=Msa0282670-mRNA-1:cds;Parent=Msa0282670-mRNA-1 |
| chr2_3 | CDS | 19083734 | 19083816 | 19083734 | ID=Msa0282670-mRNA-1:cds;Parent=Msa0282670-mRNA-1 |
| chr2_3 | CDS | 19083960 | 19084109 | 19083960 | ID=Msa0282670-mRNA-1:cds;Parent=Msa0282670-mRNA-1 |
| chr2_3 | CDS | 19084955 | 19085041 | 19084955 | ID=Msa0282670-mRNA-1:cds;Parent=Msa0282670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
