Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0285270 | XP_013463606.1 | 96.558 | 523 | 18 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1057 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0285270 | sp|Q9LMA1|FMO1_ARATH | 62.157 | 510 | 191 | 2 | 12 | 520 | 11 | 519 | 0.0 | 699 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0285270 | A0A072V7M8 | 96.558 | 523 | 18 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1057 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0203740 | Msa0285270 | 0.814320 | 1.635663e-51 | -8.615850e-47 |
| Msa0285270 | Msa0324120 | 0.831590 | 1.531167e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0285270 | MtrunA17_Chr2g0301471 | 96.558 | 523 | 18 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1057 |
| Msa0285270 | MtrunA17_Chr2g0301661 | 94.073 | 523 | 31 | 0 | 1 | 523 | 1 | 523 | 0.0 | 983 |
| Msa0285270 | MtrunA17_Chr4g0070101 | 66.857 | 525 | 168 | 4 | 1 | 523 | 3 | 523 | 0.0 | 703 |
| Msa0285270 | MtrunA17_Chr4g0070111 | 73.759 | 282 | 74 | 0 | 242 | 523 | 1 | 282 | 6.69e-164 | 466 |
| Msa0285270 | MtrunA17_Chr2g0305211 | 40.232 | 517 | 299 | 7 | 10 | 519 | 1 | 514 | 1.90e-141 | 417 |
| Msa0285270 | MtrunA17_Chr2g0305231 | 40.232 | 517 | 299 | 7 | 10 | 519 | 1 | 514 | 1.90e-141 | 417 |
| Msa0285270 | MtrunA17_Chr2g0304721 | 42.248 | 516 | 287 | 8 | 10 | 519 | 1 | 511 | 4.25e-141 | 417 |
| Msa0285270 | MtrunA17_Chr2g0286701 | 82.479 | 234 | 41 | 0 | 1 | 234 | 1 | 234 | 8.13e-141 | 408 |
| Msa0285270 | MtrunA17_Chr2g0304651 | 39.615 | 520 | 298 | 8 | 10 | 520 | 1 | 513 | 1.06e-135 | 403 |
| Msa0285270 | MtrunA17_Chr4g0070121 | 62.857 | 210 | 75 | 2 | 27 | 234 | 29 | 237 | 2.69e-84 | 261 |
| Msa0285270 | MtrunA17_Chr2g0286671 | 91.346 | 104 | 9 | 0 | 420 | 523 | 1 | 104 | 2.10e-64 | 204 |
| Msa0285270 | MtrunA17_Chr2g0286681 | 72.566 | 113 | 30 | 1 | 284 | 395 | 5 | 117 | 1.88e-53 | 176 |
| Msa0285270 | MtrunA17_Chr2g0286691 | 70.588 | 68 | 20 | 0 | 233 | 300 | 10 | 77 | 7.18e-29 | 109 |
| Msa0285270 | MtrunA17_Chr1g0169111 | 26.842 | 380 | 218 | 16 | 6 | 381 | 94 | 417 | 2.92e-18 | 87.8 |
| Msa0285270 | MtrunA17_Chr7g0262591 | 26.757 | 370 | 204 | 14 | 16 | 381 | 26 | 332 | 3.83e-17 | 83.6 |
| Msa0285270 | MtrunA17_Chr1g0182991 | 25.135 | 370 | 214 | 15 | 16 | 381 | 27 | 337 | 7.06e-17 | 82.8 |
| Msa0285270 | MtrunA17_Chr1g0148801 | 25.135 | 370 | 211 | 15 | 16 | 381 | 18 | 325 | 4.77e-16 | 80.1 |
| Msa0285270 | MtrunA17_Chr3g0091441 | 29.752 | 242 | 121 | 9 | 14 | 229 | 13 | 231 | 5.57e-16 | 80.5 |
| Msa0285270 | MtrunA17_Chr2g0301651 | 90.909 | 33 | 3 | 0 | 420 | 452 | 1 | 33 | 8.03e-14 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0285270 | AT1G19250.1 | 62.157 | 510 | 191 | 2 | 12 | 520 | 11 | 519 | 0.0 | 699 |
| Msa0285270 | AT5G45180.1 | 56.495 | 485 | 171 | 4 | 12 | 496 | 11 | 455 | 0.0 | 577 |
| Msa0285270 | AT2G33230.1 | 27.660 | 376 | 201 | 18 | 16 | 381 | 34 | 348 | 4.35e-17 | 84.0 |
| Msa0285270 | AT1G04610.1 | 26.415 | 371 | 212 | 16 | 16 | 381 | 39 | 353 | 2.62e-16 | 81.6 |
| Msa0285270 | AT4G28720.1 | 26.804 | 388 | 210 | 17 | 5 | 381 | 16 | 340 | 3.33e-16 | 81.3 |
| Msa0285270 | AT1G21430.1 | 24.665 | 373 | 207 | 14 | 16 | 381 | 11 | 316 | 2.28e-13 | 72.4 |
| Msa0285270 | AT5G07800.1 | 26.515 | 264 | 138 | 8 | 13 | 246 | 15 | 252 | 3.75e-13 | 72.0 |
| Msa0285270 | AT4G13260.2 | 24.815 | 270 | 163 | 9 | 16 | 283 | 30 | 261 | 3.76e-13 | 70.9 |
| Msa0285270 | AT1G12200.2 | 27.132 | 258 | 133 | 8 | 1 | 230 | 1 | 231 | 4.65e-13 | 71.2 |
| Msa0285270 | AT4G13260.1 | 24.138 | 377 | 224 | 13 | 9 | 381 | 23 | 341 | 5.07e-13 | 71.2 |
| Msa0285270 | AT1G62620.2 | 24.314 | 255 | 135 | 9 | 8 | 233 | 7 | 232 | 5.62e-13 | 71.2 |
| Msa0285270 | AT1G12200.1 | 27.132 | 258 | 133 | 8 | 1 | 230 | 1 | 231 | 6.60e-13 | 71.2 |
| Msa0285270 | AT1G62620.1 | 24.603 | 252 | 132 | 9 | 8 | 230 | 7 | 229 | 7.44e-13 | 71.2 |
| Msa0285270 | AT4G32540.1 | 25.526 | 380 | 211 | 19 | 9 | 381 | 16 | 330 | 7.95e-13 | 70.9 |
| Msa0285270 | AT5G43890.1 | 23.592 | 373 | 219 | 13 | 16 | 381 | 27 | 340 | 1.00e-12 | 70.5 |
| Msa0285270 | AT1G63370.2 | 24.206 | 252 | 133 | 9 | 8 | 230 | 7 | 229 | 1.20e-12 | 69.7 |
| Msa0285270 | AT1G04180.1 | 24.595 | 370 | 216 | 14 | 16 | 381 | 27 | 337 | 1.35e-12 | 70.1 |
| Msa0285270 | AT1G63370.1 | 24.206 | 252 | 133 | 9 | 8 | 230 | 7 | 229 | 1.43e-12 | 70.1 |
| Msa0285270 | AT1G62560.2 | 24.000 | 250 | 131 | 9 | 9 | 230 | 8 | 226 | 2.28e-12 | 69.3 |
| Msa0285270 | AT1G62560.1 | 24.000 | 250 | 131 | 9 | 9 | 230 | 8 | 226 | 3.30e-12 | 68.9 |
| Msa0285270 | AT5G11320.1 | 25.272 | 368 | 211 | 15 | 16 | 381 | 19 | 324 | 3.39e-12 | 68.9 |
| Msa0285270 | AT5G11320.2 | 25.272 | 368 | 211 | 15 | 16 | 381 | 19 | 324 | 3.84e-12 | 68.2 |
| Msa0285270 | AT4G32540.2 | 26.562 | 256 | 144 | 11 | 9 | 262 | 16 | 229 | 4.02e-12 | 68.6 |
| Msa0285270 | AT1G65860.1 | 26.295 | 251 | 123 | 10 | 9 | 230 | 8 | 225 | 9.35e-12 | 67.8 |
| Msa0285270 | AT5G61290.1 | 27.984 | 243 | 127 | 9 | 14 | 231 | 16 | 235 | 1.19e-11 | 67.4 |
| Msa0285270 | AT1G12140.1 | 30.986 | 213 | 107 | 9 | 21 | 227 | 45 | 223 | 8.40e-11 | 64.7 |
| Msa0285270 | AT1G12140.3 | 30.986 | 213 | 107 | 9 | 21 | 227 | 45 | 223 | 8.40e-11 | 64.7 |
Find 130 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGGCTTCCATGTCCTTAA+TGG | 0.169695 | 2_3:-24901272 | None:intergenic |
| TAATCTTTACTTTCTCTTTC+AGG | 0.185583 | 2_3:-24895560 | None:intergenic |
| CTTCACAAATTTCATCATTA+TGG | 0.191455 | 2_3:-24901348 | None:intergenic |
| CCAATTCTTGACACCATAAT+TGG | 0.204297 | 2_3:-24895365 | None:intergenic |
| CCCTTCTCACGCTGAGATAT+TGG | 0.217082 | 2_3:+24895583 | Msa0285270:CDS |
| TCTCTGGTGTTATAGCTATT+TGG | 0.224222 | 2_3:-24897730 | None:intergenic |
| GAGGAAGAAGAACTTGATTA+AGG | 0.284399 | 2_3:+24901390 | Msa0285270:CDS |
| CCGATTCAATTGGTGGTGTT+TGG | 0.289209 | 2_3:+24895465 | Msa0285270:CDS |
| TGATGAAATTTGTGAAGATT+TGG | 0.290590 | 2_3:+24901354 | Msa0285270:CDS |
| GAGCATCAAAGTGGTGGTTT+TGG | 0.290725 | 2_3:+24897795 | Msa0285270:CDS |
| TAAAGACAACCCACCAATTA+TGG | 0.292860 | 2_3:+24895352 | Msa0285270:CDS |
| ATTGGACACTTCCACATTAT+AGG | 0.303294 | 2_3:+24896908 | Msa0285270:CDS |
| AAACTTCCATTAGAGAAGTA+TGG | 0.311043 | 2_3:+24897665 | Msa0285270:CDS |
| TCTTCCTGAAAAGGGTGTTC+TGG | 0.317237 | 2_3:-24897695 | None:intergenic |
| ATTGTGCATGGTTGCCCTTC+AGG | 0.320608 | 2_3:-24896868 | None:intergenic |
| TTCAACCCATACTTCTCTAA+TGG | 0.327648 | 2_3:-24897671 | None:intergenic |
| AGGAACTGCATCACAACTTT+TGG | 0.340506 | 2_3:+24901319 | Msa0285270:CDS |
| TATTCCAACAAGCTAGAAAA+AGG | 0.349311 | 2_3:-24897923 | None:intergenic |
| GAGATAATAGGAGGCATAAA+AGG | 0.351598 | 2_3:-24897017 | None:intergenic |
| GGGAAAGAAGGTTGTGGTTG+TGG | 0.353865 | 2_3:+24896424 | Msa0285270:CDS |
| ATACGTTCCATGTGGCTTGC+TGG | 0.361433 | 2_3:+24901196 | Msa0285270:CDS |
| AATGCTCTCACAAACCATTA+AGG | 0.368860 | 2_3:+24901258 | Msa0285270:CDS |
| GATGAAATTTGTGAAGATTT+GGG | 0.369050 | 2_3:+24901355 | Msa0285270:CDS |
| AAGATTTGGGTTGGCATACT+TGG | 0.370246 | 2_3:+24901368 | Msa0285270:CDS |
| AGCTCCCACACTGGACGTTC+AGG | 0.370290 | 2_3:-24895746 | None:intergenic |
| TAATGAATCAGACGCCATTC+AGG | 0.375341 | 2_3:+24895781 | Msa0285270:CDS |
| AGCTACTAGTGACCTTGTTA+AGG | 0.378740 | 2_3:+24896403 | Msa0285270:CDS |
| TTTGGAGACATTGTTCCTAT+AGG | 0.379655 | 2_3:+24895483 | Msa0285270:CDS |
| GGTTGAAATCAAGTTTGTTC+GGG | 0.381102 | 2_3:+24895670 | Msa0285270:CDS |
| TATATACCATTGGAGATAAT+AGG | 0.382661 | 2_3:-24897029 | None:intergenic |
| CCAATTATGGTGTCAAGAAT+TGG | 0.392328 | 2_3:+24895365 | Msa0285270:CDS |
| TAACCCACAAAGGCCATGTT+TGG | 0.399285 | 2_3:-24901139 | None:intergenic |
| GATGTTGTTCTTCTTGCAAC+TGG | 0.404238 | 2_3:+24897860 | Msa0285270:CDS |
| TGGTTGAAATCAAGTTTGTT+CGG | 0.406466 | 2_3:+24895669 | Msa0285270:CDS |
| GATTCCAAACATGGCCTTTG+TGG | 0.406988 | 2_3:+24901135 | Msa0285270:CDS |
| GGAAAGAAGGTTGTGGTTGT+GGG | 0.417388 | 2_3:+24896425 | Msa0285270:CDS |
| GATGCAAAATCTTCCTGAAA+AGG | 0.421541 | 2_3:-24897704 | None:intergenic |
| GTGGTTTGCACTGGAAAATA+TGG | 0.430049 | 2_3:+24896281 | Msa0285270:CDS |
| CTTCTTGCAACTGGTTATGA+TGG | 0.433437 | 2_3:+24897869 | Msa0285270:CDS |
| AAACTTGATTTCAACCACTT+TGG | 0.433707 | 2_3:-24895663 | None:intergenic |
| TTTGAAGCCACCGATTCAAT+TGG | 0.440440 | 2_3:+24895455 | Msa0285270:CDS |
| CTTGAACAAATCAAAATAAA+CGG | 0.441646 | 2_3:-24895624 | None:intergenic |
| GTAAACCCTGGTTTGGTGTA+TGG | 0.444256 | 2_3:-24896987 | None:intergenic |
| CAAGGGACCTGAGGTGTTCA+AGG | 0.445930 | 2_3:+24896337 | Msa0285270:CDS |
| CATGGAAATGTTGGCATCAA+TGG | 0.446961 | 2_3:-24896311 | None:intergenic |
| GTGTCAAGAATTGGTATCAT+AGG | 0.455100 | 2_3:+24895374 | Msa0285270:CDS |
| TTATAGTCAGCAGCAGTGTA+AGG | 0.462752 | 2_3:-24901424 | None:intergenic |
| AAGGCCATGTTTGGAATCAA+TGG | 0.465986 | 2_3:-24901130 | None:intergenic |
| TACTTTCTCTTTCAGGCCAA+GGG | 0.470849 | 2_3:-24895553 | None:intergenic |
| GCTACTAGTGACCTTGTTAA+GGG | 0.472706 | 2_3:+24896404 | Msa0285270:CDS |
| CACTTCCACATTATAGGATG+TGG | 0.475745 | 2_3:+24896914 | Msa0285270:CDS |
| ATTCCAAACATGGCCTTTGT+GGG | 0.477703 | 2_3:+24901136 | Msa0285270:CDS |
| GGTTGTCTTTAGTCAGCATA+GGG | 0.478049 | 2_3:-24895340 | None:intergenic |
| ACCTGAGGTGTTCAAGGGTA+AGG | 0.478572 | 2_3:+24896343 | Msa0285270:CDS |
| TGACCTTGTTAAGGGAAAGA+AGG | 0.483185 | 2_3:+24896412 | Msa0285270:CDS |
| ATGAATTTAGTGATTTCCCT+TGG | 0.484807 | 2_3:+24895537 | Msa0285270:CDS |
| ATGCAAAATCTTCCTGAAAA+GGG | 0.485125 | 2_3:-24897703 | None:intergenic |
| GAAGCCACCGATTCAATTGG+TGG | 0.485598 | 2_3:+24895458 | Msa0285270:CDS |
| AACCATGCACAATGATCATA+AGG | 0.486955 | 2_3:+24896878 | Msa0285270:CDS |
| TTTAGCCATGGAGTGTGTAC+AGG | 0.489929 | 2_3:+24896469 | Msa0285270:CDS |
| AGAATTGGTATCATAGGTGC+TGG | 0.492588 | 2_3:+24895380 | Msa0285270:CDS |
| GGGTTGTCTTTAGTCAGCAT+AGG | 0.496524 | 2_3:-24895341 | None:intergenic |
| CCTTCACCATACACCAAACC+AGG | 0.500334 | 2_3:+24896981 | Msa0285270:CDS |
| TTCTTGCAACTGGTTATGAT+GGG | 0.506089 | 2_3:+24897870 | Msa0285270:CDS |
| AACTTCCATTAGAGAAGTAT+GGG | 0.506741 | 2_3:+24897666 | Msa0285270:CDS |
| TCCAATATCTCAGCGTGAGA+AGG | 0.509638 | 2_3:-24895584 | None:intergenic |
| CCAAACACCACCAATTGAAT+CGG | 0.513062 | 2_3:-24895465 | None:intergenic |
| ATGCCTCCTATTATCTCCAA+TGG | 0.513080 | 2_3:+24897023 | Msa0285270:CDS |
| AGCTTGTTGGAATACCCTAC+TGG | 0.513346 | 2_3:+24897932 | Msa0285270:CDS |
| AAGTTTGTTCGGGACAAAGA+AGG | 0.514045 | 2_3:+24895680 | Msa0285270:CDS |
| ACCTCAGGTCCCTTGTTGCA+TGG | 0.517460 | 2_3:-24896329 | None:intergenic |
| TTGAAGCTTAGTACACCTAT+AGG | 0.522294 | 2_3:-24895498 | None:intergenic |
| ACCTTACCCTTGAACACCTC+AGG | 0.522344 | 2_3:-24896344 | None:intergenic |
| CCAATATCTCAGCGTGAGAA+GGG | 0.523494 | 2_3:-24895583 | None:intergenic |
| TTACTTTCTCTTTCAGGCCA+AGG | 0.523575 | 2_3:-24895554 | None:intergenic |
| CTGGTATCATGCCATTGTAC+AGG | 0.525824 | 2_3:+24897951 | Msa0285270:CDS |
| TGATCATAAGGAGTTTGCAT+TGG | 0.525875 | 2_3:+24896890 | Msa0285270:CDS |
| ATTCTTGACACCATAATTGG+TGG | 0.526017 | 2_3:-24895362 | None:intergenic |
| CAACCTTCTTTCCCTTAACA+AGG | 0.529813 | 2_3:-24896415 | None:intergenic |
| CCCTTGTTGCATGGAAATGT+TGG | 0.530793 | 2_3:-24896320 | None:intergenic |
| AAGCCACATGGAACGTATCT+CGG | 0.538091 | 2_3:-24901191 | None:intergenic |
| ATTTGGGTTGGCATACTTGG+AGG | 0.538869 | 2_3:+24901371 | Msa0285270:CDS |
| AAATTTGTGAAGATTTGGGT+TGG | 0.542822 | 2_3:+24901359 | Msa0285270:CDS |
| CACTGCTGCTGACTATAAGA+AGG | 0.548587 | 2_3:+24901429 | Msa0285270:CDS |
| GTTTGCCTGTACACACTCCA+TGG | 0.550549 | 2_3:-24896474 | None:intergenic |
| ACTTGTTATGAAGGACCTGA+AGG | 0.551898 | 2_3:+24896853 | Msa0285270:intron |
| GAGTTTGTAGTGGTTTGCAC+TGG | 0.552544 | 2_3:+24896272 | Msa0285270:CDS |
| TTCTTGACACCATAATTGGT+GGG | 0.552760 | 2_3:-24895361 | None:intergenic |
| CACACTGGACGTTCAGGCAA+AGG | 0.553627 | 2_3:-24895740 | None:intergenic |
| ATCAGCTATTGATTTAGCCA+TGG | 0.562783 | 2_3:+24896457 | Msa0285270:CDS |
| TCATCCATTGATTCCAAACA+TGG | 0.563445 | 2_3:+24901126 | Msa0285270:CDS |
| AAAGGATTTCCATGGTCACT+AGG | 0.564382 | 2_3:-24895722 | None:intergenic |
| CTAAGCTTCAATCACAAACA+TGG | 0.565933 | 2_3:+24895510 | Msa0285270:CDS |
| TGAACAGAAAGCTCCCACAC+TGG | 0.566652 | 2_3:-24895755 | None:intergenic |
| ATTTGTGTTTACCTGTACAA+TGG | 0.566886 | 2_3:-24897962 | None:intergenic |
| TCCATGCAACAAGGGACCTG+AGG | 0.570241 | 2_3:+24896328 | Msa0285270:CDS |
| TGTTAAGGGAAAGAAGGTTG+TGG | 0.573393 | 2_3:+24896418 | Msa0285270:CDS |
| GTACTACTTTGAGTTTGTAG+TGG | 0.573658 | 2_3:+24896262 | Msa0285270:CDS |
| GATTTCCATGGTCACTAGGT+AGG | 0.575392 | 2_3:-24895718 | None:intergenic |
| TGGAAGTTTCCACAGTAAGT+AGG | 0.579702 | 2_3:-24897651 | None:intergenic |
| CTCACAAACCATTAAGGACA+TGG | 0.585097 | 2_3:+24901264 | Msa0285270:CDS |
| CTTGTTATGAAGGACCTGAA+GGG | 0.589620 | 2_3:+24896854 | Msa0285270:intron |
| ACTTCCACATTATAGGATGT+GGG | 0.591116 | 2_3:+24896915 | Msa0285270:CDS |
| ATCATAGGTGCTGGAGTGAG+TGG | 0.592554 | 2_3:+24895389 | Msa0285270:CDS |
| GTTCAGGCAAAGGATTTCCA+TGG | 0.599336 | 2_3:-24895730 | None:intergenic |
| GCCAACATTTCCATGCAACA+AGG | 0.599576 | 2_3:+24896319 | Msa0285270:CDS |
| AAAGTGAATAAAGACCTGAA+TGG | 0.607315 | 2_3:-24895795 | None:intergenic |
| TTTGCCTGAACGTCCAGTGT+GGG | 0.608494 | 2_3:+24895742 | Msa0285270:CDS |
| TACAATGGCATGATACCAGT+AGG | 0.611697 | 2_3:-24897947 | None:intergenic |
| TGTTAAGTTCAACACCAAAG+TGG | 0.611740 | 2_3:+24895649 | Msa0285270:CDS |
| AACACCACCAATTGAATCGG+TGG | 0.615968 | 2_3:-24895462 | None:intergenic |
| ATACCATTGGAGATAATAGG+AGG | 0.618461 | 2_3:-24897026 | None:intergenic |
| AAGGGACCTGAGGTGTTCAA+GGG | 0.619139 | 2_3:+24896338 | Msa0285270:CDS |
| CTCCTTATGATCATTGTGCA+TGG | 0.626136 | 2_3:-24896880 | None:intergenic |
| TCAAGAGAGCATCAAAGTGG+TGG | 0.626330 | 2_3:+24897789 | Msa0285270:CDS |
| TCATAGAGTCCTACTTACTG+TGG | 0.632816 | 2_3:+24897642 | Msa0285270:CDS |
| ACTCCCCACATCCTATAATG+TGG | 0.633850 | 2_3:-24896919 | None:intergenic |
| CTTTGCCTGAACGTCCAGTG+TGG | 0.641620 | 2_3:+24895741 | Msa0285270:CDS |
| TAATAGACCAGCAAGCCACA+TGG | 0.644884 | 2_3:-24901203 | None:intergenic |
| GAAGAAGAACTTGATTAAGG+AGG | 0.645161 | 2_3:+24901393 | Msa0285270:CDS |
| CTTCCACATTATAGGATGTG+GGG | 0.652290 | 2_3:+24896916 | Msa0285270:CDS |
| CCTGGTTTGGTGTATGGTGA+AGG | 0.657784 | 2_3:-24896981 | None:intergenic |
| ACAATGGCATGATACCAGTA+GGG | 0.660299 | 2_3:-24897946 | None:intergenic |
| GGACGCCTACCTAGTGACCA+TGG | 0.665773 | 2_3:+24895713 | Msa0285270:CDS |
| CTTCACCATACACCAAACCA+GGG | 0.675353 | 2_3:+24896982 | Msa0285270:CDS |
| ACTCTCAACATAACCCACAA+AGG | 0.682237 | 2_3:-24901149 | None:intergenic |
| TCTTCAAGAGAGCATCAAAG+TGG | 0.688034 | 2_3:+24897786 | Msa0285270:CDS |
| GAGTGTGTACAGGCAAACCA+AGG | 0.694042 | 2_3:+24896479 | Msa0285270:CDS |
| CCAACATTTCCATGCAACAA+GGG | 0.700966 | 2_3:+24896320 | Msa0285270:CDS |
| CATCCGAGATACGTTCCATG+TGG | 0.741395 | 2_3:+24901188 | Msa0285270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATAATAAATT+TGG | + | chr2_3:24899315-24899334 | Msa0285270:intron | 0.0% |
| !! | TATATATATATAATAAATTT+GGG | + | chr2_3:24899316-24899335 | Msa0285270:intron | 0.0% |
| !! | AAAAAAAAATCTTATTATAG+GGG | + | chr2_3:24896101-24896120 | Msa0285270:intron | 10.0% |
| !!! | AGAAAAAAATTACTTTTTTA+AGG | + | chr2_3:24897110-24897129 | Msa0285270:intron | 10.0% |
| !!! | AAAAAAAAGTCATTTAATTT+TGG | - | chr2_3:24898144-24898163 | None:intergenic | 10.0% |
| !!! | TAGTTTTTAGTATTTTTAAT+GGG | - | chr2_3:24898563-24898582 | None:intergenic | 10.0% |
| !!! | ATAGTTTTTAGTATTTTTAA+TGG | - | chr2_3:24898564-24898583 | None:intergenic | 10.0% |
| !!! | ATTTTTTTAAAAAGTGATTA+GGG | - | chr2_3:24899538-24899557 | None:intergenic | 10.0% |
| !!! | AAATAATACATTTTGAAATA+AGG | + | chr2_3:24899561-24899580 | Msa0285270:intron | 10.0% |
| !!! | AATAATACATTTTGAAATAA+GGG | + | chr2_3:24899562-24899581 | Msa0285270:intron | 10.0% |
| !!! | AATTAAACAAACTTAATTTT+AGG | - | chr2_3:24899962-24899981 | None:intergenic | 10.0% |
| !! | TTTAAAAATTTAAGAGTTTA+AGG | - | chr2_3:24899987-24900006 | None:intergenic | 10.0% |
| !! | ATAACTATTAAAATTATGTA+AGG | + | chr2_3:24900306-24900325 | Msa0285270:intron | 10.0% |
| !!! | ATATTTTATTAAATAGCATT+TGG | - | chr2_3:24901483-24901502 | None:intergenic | 10.0% |
| !!! | AAGTTGATAGTAAAATAATT+AGG | - | chr2_3:24896231-24896250 | None:intergenic | 15.0% |
| !! | ATTATACTACTTCTAAATTT+AGG | + | chr2_3:24898354-24898373 | Msa0285270:intron | 15.0% |
| !!! | TGATTTAATATATGTTTTTG+TGG | + | chr2_3:24898635-24898654 | Msa0285270:intron | 15.0% |
| !! | AAATGTAATATACTCATATA+CGG | + | chr2_3:24899340-24899359 | Msa0285270:intron | 15.0% |
| !!! | TTTTTTTAAAAAGTGATTAG+GGG | - | chr2_3:24899537-24899556 | None:intergenic | 15.0% |
| !!! | CATTTTTTTAAAAAGTGATT+AGG | - | chr2_3:24899539-24899558 | None:intergenic | 15.0% |
| !!! | AATTTTATAGACTATAATAG+TGG | - | chr2_3:24899797-24899816 | None:intergenic | 15.0% |
| !!! | ATATCTAACCTTTTATTTTT+GGG | - | chr2_3:24899841-24899860 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTTAGTA+AGG | - | chr2_3:24899899-24899918 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr2_3:24900652-24900671 | Msa0285270:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr2_3:24900653-24900672 | Msa0285270:intron | 15.0% |
| !! | GAAATTAAAAAAATGAAACT+TGG | - | chr2_3:24901051-24901070 | None:intergenic | 15.0% |
| !! | CTTGAACAAATCAAAATAAA+CGG | - | chr2_3:24895627-24895646 | None:intergenic | 20.0% |
| !! | AAACAAGCATATTAAACAAT+TGG | + | chr2_3:24895983-24896002 | Msa0285270:intron | 20.0% |
| !! | CAACATGTAAACTAAATTAA+AGG | - | chr2_3:24896177-24896196 | None:intergenic | 20.0% |
| !!! | GTCTAAATATTTTAACATAG+TGG | - | chr2_3:24896594-24896613 | None:intergenic | 20.0% |
| !! | AAATATTTAGACAAATACCT+CGG | + | chr2_3:24896602-24896621 | Msa0285270:intron | 20.0% |
| !!! | TTAACTATATTTTAATACCG+AGG | - | chr2_3:24896622-24896641 | None:intergenic | 20.0% |
| !! | ATTTCACAATGAAAGTAATT+GGG | - | chr2_3:24896802-24896821 | None:intergenic | 20.0% |
| !! | TATTTCACAATGAAAGTAAT+TGG | - | chr2_3:24896803-24896822 | None:intergenic | 20.0% |
| !! | CATATATACATATATACCAT+TGG | - | chr2_3:24897042-24897061 | None:intergenic | 20.0% |
| !! | TGATGTACAAATATAGTATT+CGG | + | chr2_3:24897185-24897204 | Msa0285270:intron | 20.0% |
| !! | TTAATTATTGTCTTTATGCT+TGG | + | chr2_3:24897459-24897478 | Msa0285270:intron | 20.0% |
| !! | TTTAGATTGAGTATATTGAT+TGG | - | chr2_3:24898018-24898037 | None:intergenic | 20.0% |
| !! | TAGTTTATGTAATTATGAGT+TGG | - | chr2_3:24898317-24898336 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCATGCTTTTTTA+CGG | - | chr2_3:24898458-24898477 | None:intergenic | 20.0% |
| !!! | TTAATATTATTTTGCATGCA+TGG | + | chr2_3:24898583-24898602 | Msa0285270:intron | 20.0% |
| !!! | GTTTTTTATGGTATTTATCA+TGG | + | chr2_3:24898608-24898627 | Msa0285270:intron | 20.0% |
| !! | ACAACTGTAAAATTTATAGA+TGG | + | chr2_3:24899152-24899171 | Msa0285270:intron | 20.0% |
| !! | AATGTAATATACTCATATAC+GGG | + | chr2_3:24899341-24899360 | Msa0285270:intron | 20.0% |
| !!! | CATATCTAACCTTTTATTTT+TGG | - | chr2_3:24899842-24899861 | None:intergenic | 20.0% |
| !!! | TAAAAGGTTAGATATGTTTT+TGG | + | chr2_3:24899846-24899865 | Msa0285270:intron | 20.0% |
| !!! | TAGAAGTTCTCAATTTTATA+GGG | - | chr2_3:24899873-24899892 | None:intergenic | 20.0% |
| !!! | TTAGAAGTTCTCAATTTTAT+AGG | - | chr2_3:24899874-24899893 | None:intergenic | 20.0% |
| !!! | AAACAAACTTAATTTTAGGA+GGG | - | chr2_3:24899958-24899977 | None:intergenic | 20.0% |
| !!! | TAAACAAACTTAATTTTAGG+AGG | - | chr2_3:24899959-24899978 | None:intergenic | 20.0% |
| !!! | CACATTTAGAACAATATAAA+AGG | + | chr2_3:24900021-24900040 | Msa0285270:intron | 20.0% |
| !! | TAAACAAGTTTGAATTTAGA+AGG | + | chr2_3:24900245-24900264 | Msa0285270:intron | 20.0% |
| !!! | TTTGATAAATATGTTTCTGA+TGG | - | chr2_3:24900361-24900380 | None:intergenic | 20.0% |
| !!! | TCATTTTCAGATGAAAATAT+AGG | + | chr2_3:24900402-24900421 | Msa0285270:intron | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+AGG | + | chr2_3:24900589-24900608 | Msa0285270:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr2_3:24900612-24900631 | Msa0285270:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr2_3:24900685-24900704 | Msa0285270:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr2_3:24900686-24900705 | Msa0285270:intron | 20.0% |
| !!! | AAAAGAGCAATTTTGTATAA+AGG | - | chr2_3:24900781-24900800 | None:intergenic | 20.0% |
| ! | TAATCTTTACTTTCTCTTTC+AGG | - | chr2_3:24895563-24895582 | None:intergenic | 25.0% |
| !! | ATGTTTCTATAAGAGAAACA+AGG | - | chr2_3:24896037-24896056 | None:intergenic | 25.0% |
| ! | ATAGAAACATAATACATGCA+AGG | + | chr2_3:24896047-24896066 | Msa0285270:intron | 25.0% |
| ! | TAGAAACATAATACATGCAA+GGG | + | chr2_3:24896048-24896067 | Msa0285270:intron | 25.0% |
| !!! | TTGCTTTAAACTTGTTATGA+AGG | + | chr2_3:24896844-24896863 | Msa0285270:intron | 25.0% |
| ! | TATATACCATTGGAGATAAT+AGG | - | chr2_3:24897032-24897051 | None:intergenic | 25.0% |
| !! | TTTTATTAACCGTAGTAGTT+TGG | - | chr2_3:24897411-24897430 | None:intergenic | 25.0% |
| !!! | TAATTGATGACTTTTAACAG+AGG | + | chr2_3:24897603-24897622 | Msa0285270:intron | 25.0% |
| !! | TATATGCCTATAACTTGTAT+GGG | - | chr2_3:24898222-24898241 | None:intergenic | 25.0% |
| !! | TTATATGCCTATAACTTGTA+TGG | - | chr2_3:24898223-24898242 | None:intergenic | 25.0% |
| !! | AAAAAGTGATCCTATCTTTT+TGG | + | chr2_3:24898471-24898490 | Msa0285270:intron | 25.0% |
| !! | AAAAGTGATCCTATCTTTTT+GGG | + | chr2_3:24898472-24898491 | Msa0285270:intron | 25.0% |
| !!! | CTTTTGTATGGATATTTTTG+TGG | + | chr2_3:24898673-24898692 | Msa0285270:intron | 25.0% |
| ! | ATGTCTTCATAAACTTAGTT+GGG | - | chr2_3:24898761-24898780 | None:intergenic | 25.0% |
| ! | CTTAAAATAAAGCCTTTGAT+AGG | - | chr2_3:24898960-24898979 | None:intergenic | 25.0% |
| !!! | TGAAATTTGTTACACAAACT+AGG | - | chr2_3:24899035-24899054 | None:intergenic | 25.0% |
| ! | AATCATGTCTGATAACAATA+AGG | + | chr2_3:24899191-24899210 | Msa0285270:intron | 25.0% |
| !!! | TTGATTTGTGTGAATTGTTA+AGG | - | chr2_3:24899270-24899289 | None:intergenic | 25.0% |
| ! | CCTATTAATTTAATTAAGCC+GGG | - | chr2_3:24899407-24899426 | None:intergenic | 25.0% |
| ! | GCCTATTAATTTAATTAAGC+CGG | - | chr2_3:24899408-24899427 | None:intergenic | 25.0% |
| !!! | ATACATTTTGAAATAAGGGT+TGG | + | chr2_3:24899566-24899585 | Msa0285270:intron | 25.0% |
| !!! | TACATTTTGAAATAAGGGTT+GGG | + | chr2_3:24899567-24899586 | Msa0285270:intron | 25.0% |
| ! | AATCTTGACCCAAAAATAAA+AGG | + | chr2_3:24899830-24899849 | Msa0285270:intron | 25.0% |
| ! | AACAATCATTCTAAACATGA+TGG | - | chr2_3:24900472-24900491 | None:intergenic | 25.0% |
| ! | TGTATAAATAAAGAGGAAAG+TGG | + | chr2_3:24900596-24900615 | Msa0285270:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr2_3:24900611-24900630 | Msa0285270:intron | 25.0% |
| !!! | GGACACTTTTTTTAGAAAAT+GGG | + | chr2_3:24900721-24900740 | Msa0285270:intron | 25.0% |
| ! | TGATTTGATTAGTAGATGTT+AGG | + | chr2_3:24900800-24900819 | Msa0285270:intron | 25.0% |
| !!! | TCAAATTATCTGTTGACTTT+GGG | - | chr2_3:24900952-24900971 | None:intergenic | 25.0% |
| !!! | AAACCTTGTAGATTTTTTCA+TGG | - | chr2_3:24901293-24901312 | None:intergenic | 25.0% |
| !!! | AATCTACAAGGTTTTATACA+AGG | + | chr2_3:24901299-24901318 | Msa0285270:CDS | 25.0% |
| ! | CTTCACAAATTTCATCATTA+TGG | - | chr2_3:24901351-24901370 | None:intergenic | 25.0% |
| ! | TGATGAAATTTGTGAAGATT+TGG | + | chr2_3:24901354-24901373 | Msa0285270:CDS | 25.0% |
| ! | GATGAAATTTGTGAAGATTT+GGG | + | chr2_3:24901355-24901374 | Msa0285270:CDS | 25.0% |
| !!! | GGAAGATTGAGTTTTTTATT+TGG | + | chr2_3:24901450-24901469 | Msa0285270:exon | 25.0% |
| GGGTTGTAGTAGAAAAAAAT+TGG | - | chr2_3:24895323-24895342 | None:intergenic | 30.0% | |
| ATGAATTTAGTGATTTCCCT+TGG | + | chr2_3:24895537-24895556 | Msa0285270:CDS | 30.0% | |
| AAACTTGATTTCAACCACTT+TGG | - | chr2_3:24895666-24895685 | None:intergenic | 30.0% | |
| ! | TGGTTGAAATCAAGTTTGTT+CGG | + | chr2_3:24895669-24895688 | Msa0285270:CDS | 30.0% |
| !!! | GACAAAGAAGGTTTTGATTT+TGG | + | chr2_3:24895692-24895711 | Msa0285270:CDS | 30.0% |
| AAAGTGAATAAAGACCTGAA+TGG | - | chr2_3:24895798-24895817 | None:intergenic | 30.0% | |
| TTCTATAAGAGAAACAAGGA+AGG | - | chr2_3:24896033-24896052 | None:intergenic | 30.0% | |
| ATACATGCAAGGGTAAAAAT+TGG | + | chr2_3:24896058-24896077 | Msa0285270:intron | 30.0% | |
| CATAGTGAAAATTGTTACCT+TGG | - | chr2_3:24896499-24896518 | None:intergenic | 30.0% | |
| ATGTGTTTAATGTGTACACA+AGG | + | chr2_3:24896538-24896557 | Msa0285270:intron | 30.0% | |
| TAATTGGGCAGATGTTAATT+TGG | - | chr2_3:24896787-24896806 | None:intergenic | 30.0% | |
| GAGTCAATTCATTTGAAAGA+CGG | + | chr2_3:24897264-24897283 | Msa0285270:intron | 30.0% | |
| AGTTGTAAAATGAGCTCAAA+AGG | + | chr2_3:24897341-24897360 | Msa0285270:intron | 30.0% | |
| AAACTTCCATTAGAGAAGTA+TGG | + | chr2_3:24897665-24897684 | Msa0285270:CDS | 30.0% | |
| ! | AACTTCCATTAGAGAAGTAT+GGG | + | chr2_3:24897666-24897685 | Msa0285270:CDS | 30.0% |
| ATGCAAAATCTTCCTGAAAA+GGG | - | chr2_3:24897706-24897725 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAATGAGGCTGATA+AGG | + | chr2_3:24897754-24897773 | Msa0285270:CDS | 30.0% |
| !! | TTTTTCAATGAGGCTGATAA+GGG | + | chr2_3:24897755-24897774 | Msa0285270:CDS | 30.0% |
| TATTCCAACAAGCTAGAAAA+AGG | - | chr2_3:24897926-24897945 | None:intergenic | 30.0% | |
| ATTTGTGTTTACCTGTACAA+TGG | - | chr2_3:24897965-24897984 | None:intergenic | 30.0% | |
| ! | GATTGAGTATATTGATTGGA+GGG | - | chr2_3:24898014-24898033 | None:intergenic | 30.0% |
| ! | AGATTGAGTATATTGATTGG+AGG | - | chr2_3:24898015-24898034 | None:intergenic | 30.0% |
| ! | CACTAATGATCATTTTACGA+TGG | + | chr2_3:24898195-24898214 | Msa0285270:intron | 30.0% |
| ATTAGATAGAGCTGTCAAAA+TGG | + | chr2_3:24898381-24898400 | Msa0285270:intron | 30.0% | |
| TTAGATAGAGCTGTCAAAAT+GGG | + | chr2_3:24898382-24898401 | Msa0285270:intron | 30.0% | |
| !! | TCATACTCTCTACTTTTGTA+TGG | + | chr2_3:24898661-24898680 | Msa0285270:intron | 30.0% |
| CATGTCTTCATAAACTTAGT+TGG | - | chr2_3:24898762-24898781 | None:intergenic | 30.0% | |
| !! | TTGTTCTTAGCATCACTTTT+AGG | + | chr2_3:24898848-24898867 | Msa0285270:intron | 30.0% |
| !! | TGTTCTTAGCATCACTTTTA+GGG | + | chr2_3:24898849-24898868 | Msa0285270:intron | 30.0% |
| TAAAGCCTTTGATAGGTATA+AGG | - | chr2_3:24898953-24898972 | None:intergenic | 30.0% | |
| AGTACATTGCACAAATTGAA+AGG | - | chr2_3:24899085-24899104 | None:intergenic | 30.0% | |
| CCCGGCTTAATTAAATTAAT+AGG | + | chr2_3:24899404-24899423 | Msa0285270:intron | 30.0% | |
| ACTCATTTATTAAACGAGCT+AGG | + | chr2_3:24899449-24899468 | Msa0285270:intron | 30.0% | |
| TTTAAAAAGTGATTAGGGGT+GGG | - | chr2_3:24899533-24899552 | None:intergenic | 30.0% | |
| !! | TTTTAAAAAGTGATTAGGGG+TGG | - | chr2_3:24899534-24899553 | None:intergenic | 30.0% |
| ! | TTGATAGCCCATAAATAAAG+TGG | + | chr2_3:24899639-24899658 | Msa0285270:intron | 30.0% |
| TGATAGCCCATAAATAAAGT+GGG | + | chr2_3:24899640-24899659 | Msa0285270:intron | 30.0% | |
| !! | TCACATATAAATGGGTTGAA+GGG | - | chr2_3:24899673-24899692 | None:intergenic | 30.0% |
| !! | ATCACATATAAATGGGTTGA+AGG | - | chr2_3:24899674-24899693 | None:intergenic | 30.0% |
| GTGGAACATCACATATAAAT+GGG | - | chr2_3:24899681-24899700 | None:intergenic | 30.0% | |
| ATTTATATGTGATGTTCCAC+CGG | + | chr2_3:24899681-24899700 | Msa0285270:intron | 30.0% | |
| CTAAAACTAGAGTTGTCAAA+TGG | - | chr2_3:24899733-24899752 | None:intergenic | 30.0% | |
| TGTGTCAATTGTTAATTGAG+TGG | - | chr2_3:24900498-24900517 | None:intergenic | 30.0% | |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr2_3:24900699-24900718 | Msa0285270:intron | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr2_3:24900700-24900719 | Msa0285270:intron | 30.0% |
| !!! | GGGACACTTTTTTTAGAAAA+TGG | + | chr2_3:24900720-24900739 | Msa0285270:intron | 30.0% |
| !! | CAAATTATCTGTTGACTTTG+GGG | - | chr2_3:24900951-24900970 | None:intergenic | 30.0% |
| !! | GTCAAATTATCTGTTGACTT+TGG | - | chr2_3:24900953-24900972 | None:intergenic | 30.0% |
| AGCTATGATTTATTTGTGAC+AGG | + | chr2_3:24901095-24901114 | Msa0285270:intron | 30.0% | |
| GCTATGATTTATTTGTGACA+GGG | + | chr2_3:24901096-24901115 | Msa0285270:intron | 30.0% | |
| CTATGATTTATTTGTGACAG+GGG | + | chr2_3:24901097-24901116 | Msa0285270:intron | 30.0% | |
| AAGCCATGAAAAAATCTACA+AGG | + | chr2_3:24901287-24901306 | Msa0285270:CDS | 30.0% | |
| AAATTTGTGAAGATTTGGGT+TGG | + | chr2_3:24901359-24901378 | Msa0285270:CDS | 30.0% | |
| TAAAGACAACCCACCAATTA+TGG | + | chr2_3:24895352-24895371 | Msa0285270:CDS | 35.0% | |
| TTCTTGACACCATAATTGGT+GGG | - | chr2_3:24895364-24895383 | None:intergenic | 35.0% | |
| ATTCTTGACACCATAATTGG+TGG | - | chr2_3:24895365-24895384 | None:intergenic | 35.0% | |
| CCAATTCTTGACACCATAAT+TGG | - | chr2_3:24895368-24895387 | None:intergenic | 35.0% | |
| ! | CCAATTATGGTGTCAAGAAT+TGG | + | chr2_3:24895365-24895384 | Msa0285270:CDS | 35.0% |
| GTGTCAAGAATTGGTATCAT+AGG | + | chr2_3:24895374-24895393 | Msa0285270:CDS | 35.0% | |
| !! | GTGTGATAGTTGTTTTGCTA+CGG | - | chr2_3:24895420-24895439 | None:intergenic | 35.0% |
| TTTGGAGACATTGTTCCTAT+AGG | + | chr2_3:24895483-24895502 | Msa0285270:CDS | 35.0% | |
| TTGAAGCTTAGTACACCTAT+AGG | - | chr2_3:24895501-24895520 | None:intergenic | 35.0% | |
| CTAAGCTTCAATCACAAACA+TGG | + | chr2_3:24895510-24895529 | Msa0285270:CDS | 35.0% | |
| TGTTAAGTTCAACACCAAAG+TGG | + | chr2_3:24895649-24895668 | Msa0285270:CDS | 35.0% | |
| ! | GGTTGAAATCAAGTTTGTTC+GGG | + | chr2_3:24895670-24895689 | Msa0285270:CDS | 35.0% |
| GGGGAATATTATGCAAGAAA+TGG | + | chr2_3:24896120-24896139 | Msa0285270:intron | 35.0% | |
| TTAAAGGCTATGCTGTTGTT+AGG | - | chr2_3:24896161-24896180 | None:intergenic | 35.0% | |
| ! | GTACTACTTTGAGTTTGTAG+TGG | + | chr2_3:24896262-24896281 | Msa0285270:CDS | 35.0% |
| !! | ATCAGCTATTGATTTAGCCA+TGG | + | chr2_3:24896457-24896476 | Msa0285270:CDS | 35.0% |
| AACCATGCACAATGATCATA+AGG | + | chr2_3:24896878-24896897 | Msa0285270:CDS | 35.0% | |
| TGATCATAAGGAGTTTGCAT+TGG | + | chr2_3:24896890-24896909 | Msa0285270:CDS | 35.0% | |
| ATTGGACACTTCCACATTAT+AGG | + | chr2_3:24896908-24896927 | Msa0285270:CDS | 35.0% | |
| ACTTCCACATTATAGGATGT+GGG | + | chr2_3:24896915-24896934 | Msa0285270:CDS | 35.0% | |
| GTTGCGTAGAACATGAAAAA+TGG | - | chr2_3:24896946-24896965 | None:intergenic | 35.0% | |
| !! | CTTTTAAGTAAACCCTGGTT+TGG | - | chr2_3:24896997-24897016 | None:intergenic | 35.0% |
| !! | AAAGGCTTTTAAGTAAACCC+TGG | - | chr2_3:24897002-24897021 | None:intergenic | 35.0% |
| ! | GAGATAATAGGAGGCATAAA+AGG | - | chr2_3:24897020-24897039 | None:intergenic | 35.0% |
| ATACCATTGGAGATAATAGG+AGG | - | chr2_3:24897029-24897048 | None:intergenic | 35.0% | |
| ATTTGAAAGACGGTTCAAAC+AGG | + | chr2_3:24897274-24897293 | Msa0285270:intron | 35.0% | |
| TTCAACCCATACTTCTCTAA+TGG | - | chr2_3:24897674-24897693 | None:intergenic | 35.0% | |
| GATGCAAAATCTTCCTGAAA+AGG | - | chr2_3:24897707-24897726 | None:intergenic | 35.0% | |
| !! | TCTCTGGTGTTATAGCTATT+TGG | - | chr2_3:24897733-24897752 | None:intergenic | 35.0% |
| !!! | ACCAGAGAGTTTTTTCAATG+AGG | + | chr2_3:24897745-24897764 | Msa0285270:CDS | 35.0% |
| TTCTTGCAACTGGTTATGAT+GGG | + | chr2_3:24897870-24897889 | Msa0285270:CDS | 35.0% | |
| ! | GTTTTGCTGAGTATGTTGAA+TGG | - | chr2_3:24898293-24898312 | None:intergenic | 35.0% |
| !!! | TTTCATGCTTTTTTACGGTC+CGG | - | chr2_3:24898453-24898472 | None:intergenic | 35.0% |
| !! | ACCAGGCCTATATTTTTCAA+GGG | + | chr2_3:24898502-24898521 | Msa0285270:intron | 35.0% |
| !!! | GCCTATATTTTTCAAGGGTT+GGG | + | chr2_3:24898507-24898526 | Msa0285270:intron | 35.0% |
| ACCCAACCCTTGAAAAATAT+AGG | - | chr2_3:24898511-24898530 | None:intergenic | 35.0% | |
| !!! | ATATTTTTCAAGGGTTGGGT+CGG | + | chr2_3:24898511-24898530 | Msa0285270:intron | 35.0% |
| !!! | GCATGCATGGATGTTTTTTA+TGG | + | chr2_3:24898596-24898615 | Msa0285270:intron | 35.0% |
| !! | GTTCTTAGCATCACTTTTAG+GGG | + | chr2_3:24898850-24898869 | Msa0285270:intron | 35.0% |
| AGGCCTAGTTGAAAAAACTA+AGG | + | chr2_3:24898915-24898934 | Msa0285270:intron | 35.0% | |
| !!! | AGGCCTTAGTTTTTTCAACT+AGG | - | chr2_3:24898921-24898940 | None:intergenic | 35.0% |
| !!! | CAAAGGCTTTATTTTAAGCC+TGG | + | chr2_3:24898962-24898981 | Msa0285270:intron | 35.0% |
| !! | GTCAAGTCAGGCTTTTAAAA+AGG | - | chr2_3:24898993-24899012 | None:intergenic | 35.0% |
| ! | GATATGTCTAAGGTCAAGTA+TGG | - | chr2_3:24899238-24899257 | None:intergenic | 35.0% |
| ! | GTTTGCTACTGATATGTCTA+AGG | - | chr2_3:24899248-24899267 | None:intergenic | 35.0% |
| !!! | CTTTTTTATAAGCCTAAGCC+CGG | + | chr2_3:24899386-24899405 | Msa0285270:intron | 35.0% |
| AATTTAATTAAGCCGGGCTT+AGG | - | chr2_3:24899401-24899420 | None:intergenic | 35.0% | |
| TTGTATAGCCCACTACTAAT+TGG | + | chr2_3:24899603-24899622 | Msa0285270:intron | 35.0% | |
| TGTATAGCCCACTACTAATT+GGG | + | chr2_3:24899604-24899623 | Msa0285270:intron | 35.0% | |
| !! | ACATATAAATGGGTTGAAGG+GGG | - | chr2_3:24899671-24899690 | None:intergenic | 35.0% |
| !! | CACATATAAATGGGTTGAAG+GGG | - | chr2_3:24899672-24899691 | None:intergenic | 35.0% |
| GGTGGAACATCACATATAAA+TGG | - | chr2_3:24899682-24899701 | None:intergenic | 35.0% | |
| TTTATATGTGATGTTCCACC+GGG | + | chr2_3:24899682-24899701 | Msa0285270:intron | 35.0% | |
| TAGAAGGAACTAGAACTAAG+TGG | + | chr2_3:24900261-24900280 | Msa0285270:intron | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | - | chr2_3:24900552-24900571 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | - | chr2_3:24900553-24900572 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | chr2_3:24900566-24900585 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr2_3:24900734-24900753 | Msa0285270:intron | 35.0% | |
| TGACTATTCACTCTCAACTA+TGG | - | chr2_3:24901075-24901094 | None:intergenic | 35.0% | |
| !! | TCATCCATTGATTCCAAACA+TGG | + | chr2_3:24901126-24901145 | Msa0285270:CDS | 35.0% |
| AATGCTCTCACAAACCATTA+AGG | + | chr2_3:24901258-24901277 | Msa0285270:CDS | 35.0% | |
| GAGGAAGAAGAACTTGATTA+AGG | + | chr2_3:24901390-24901409 | Msa0285270:CDS | 35.0% | |
| GAAGAAGAACTTGATTAAGG+AGG | + | chr2_3:24901393-24901412 | Msa0285270:CDS | 35.0% | |
| GGTTGTCTTTAGTCAGCATA+GGG | - | chr2_3:24895343-24895362 | None:intergenic | 40.0% | |
| AGAATTGGTATCATAGGTGC+TGG | + | chr2_3:24895380-24895399 | Msa0285270:CDS | 40.0% | |
| CGGTGGCTTCAAAAACAATA+GGG | - | chr2_3:24895448-24895467 | None:intergenic | 40.0% | |
| TCGGTGGCTTCAAAAACAAT+AGG | - | chr2_3:24895449-24895468 | None:intergenic | 40.0% | |
| !! | TTTGAAGCCACCGATTCAAT+TGG | + | chr2_3:24895455-24895474 | Msa0285270:CDS | 40.0% |
| CCAAACACCACCAATTGAAT+CGG | - | chr2_3:24895468-24895487 | None:intergenic | 40.0% | |
| TACTTTCTCTTTCAGGCCAA+GGG | - | chr2_3:24895556-24895575 | None:intergenic | 40.0% | |
| TTACTTTCTCTTTCAGGCCA+AGG | - | chr2_3:24895557-24895576 | None:intergenic | 40.0% | |
| ! | AAGTTTGTTCGGGACAAAGA+AGG | + | chr2_3:24895680-24895699 | Msa0285270:CDS | 40.0% |
| AAAGGATTTCCATGGTCACT+AGG | - | chr2_3:24895725-24895744 | None:intergenic | 40.0% | |
| TAATGAATCAGACGCCATTC+AGG | + | chr2_3:24895781-24895800 | Msa0285270:CDS | 40.0% | |
| ! | GTGGTTTGCACTGGAAAATA+TGG | + | chr2_3:24896281-24896300 | Msa0285270:CDS | 40.0% |
| CATGGAAATGTTGGCATCAA+TGG | - | chr2_3:24896314-24896333 | None:intergenic | 40.0% | |
| CCAACATTTCCATGCAACAA+GGG | + | chr2_3:24896320-24896339 | Msa0285270:CDS | 40.0% | |
| AGCTACTAGTGACCTTGTTA+AGG | + | chr2_3:24896403-24896422 | Msa0285270:CDS | 40.0% | |
| GCTACTAGTGACCTTGTTAA+GGG | + | chr2_3:24896404-24896423 | Msa0285270:CDS | 40.0% | |
| TGACCTTGTTAAGGGAAAGA+AGG | + | chr2_3:24896412-24896431 | Msa0285270:CDS | 40.0% | |
| CAACCTTCTTTCCCTTAACA+AGG | - | chr2_3:24896418-24896437 | None:intergenic | 40.0% | |
| TGTTAAGGGAAAGAAGGTTG+TGG | + | chr2_3:24896418-24896437 | Msa0285270:CDS | 40.0% | |
| !! | ACTTGTTATGAAGGACCTGA+AGG | + | chr2_3:24896853-24896872 | Msa0285270:intron | 40.0% |
| ! | CTTGTTATGAAGGACCTGAA+GGG | + | chr2_3:24896854-24896873 | Msa0285270:intron | 40.0% |
| CTCCTTATGATCATTGTGCA+TGG | - | chr2_3:24896883-24896902 | None:intergenic | 40.0% | |
| CACTTCCACATTATAGGATG+TGG | + | chr2_3:24896914-24896933 | Msa0285270:CDS | 40.0% | |
| CTTCCACATTATAGGATGTG+GGG | + | chr2_3:24896916-24896935 | Msa0285270:CDS | 40.0% | |
| ATGCCTCCTATTATCTCCAA+TGG | + | chr2_3:24897023-24897042 | Msa0285270:CDS | 40.0% | |
| TGATACTTTGAGCCGTCTAA+TGG | + | chr2_3:24897375-24897394 | Msa0285270:intron | 40.0% | |
| GATACTTTGAGCCGTCTAAT+GGG | + | chr2_3:24897376-24897395 | Msa0285270:intron | 40.0% | |
| ATCCGTGATCCAAACTACTA+CGG | + | chr2_3:24897399-24897418 | Msa0285270:intron | 40.0% | |
| AACCGTAGTAGTTTGGATCA+CGG | - | chr2_3:24897404-24897423 | None:intergenic | 40.0% | |
| TCATAGAGTCCTACTTACTG+TGG | + | chr2_3:24897642-24897661 | Msa0285270:CDS | 40.0% | |
| TGGAAGTTTCCACAGTAAGT+AGG | - | chr2_3:24897654-24897673 | None:intergenic | 40.0% | |
| GCCTCATTGAAAAAACTCTC+TGG | - | chr2_3:24897749-24897768 | None:intergenic | 40.0% | |
| !! | TCTTCAAGAGAGCATCAAAG+TGG | + | chr2_3:24897786-24897805 | Msa0285270:CDS | 40.0% |
| !!! | TCAAAGTGGTGGTTTTGGAA+TGG | + | chr2_3:24897800-24897819 | Msa0285270:CDS | 40.0% |
| GATGTTGTTCTTCTTGCAAC+TGG | + | chr2_3:24897860-24897879 | Msa0285270:CDS | 40.0% | |
| CTTCTTGCAACTGGTTATGA+TGG | + | chr2_3:24897869-24897888 | Msa0285270:CDS | 40.0% | |
| ! | AGAAAAAGGCTCTGGCAAAA+TGG | - | chr2_3:24897912-24897931 | None:intergenic | 40.0% |
| AACAAGCTAGAAAAAGGCTC+TGG | - | chr2_3:24897920-24897939 | None:intergenic | 40.0% | |
| !!! | AGAGCCTTTTTCTAGCTTGT+TGG | + | chr2_3:24897919-24897938 | Msa0285270:CDS | 40.0% |
| ACAATGGCATGATACCAGTA+GGG | - | chr2_3:24897949-24897968 | None:intergenic | 40.0% | |
| TACAATGGCATGATACCAGT+AGG | - | chr2_3:24897950-24897969 | None:intergenic | 40.0% | |
| GATGGACCCATACAAGTTAT+AGG | + | chr2_3:24898213-24898232 | Msa0285270:intron | 40.0% | |
| TGCTGAGTATGTTGAATGGA+GGG | - | chr2_3:24898289-24898308 | None:intergenic | 40.0% | |
| TTGCTGAGTATGTTGAATGG+AGG | - | chr2_3:24898290-24898309 | None:intergenic | 40.0% | |
| !! | GTACTAAAATAGTGGGTCGA+GGG | - | chr2_3:24898427-24898446 | None:intergenic | 40.0% |
| !! | TGTACTAAAATAGTGGGTCG+AGG | - | chr2_3:24898428-24898447 | None:intergenic | 40.0% |
| CCGGACTGTACTAAAATAGT+GGG | - | chr2_3:24898434-24898453 | None:intergenic | 40.0% | |
| !!! | CCCACTATTTTAGTACAGTC+CGG | + | chr2_3:24898431-24898450 | Msa0285270:intron | 40.0% |
| TCCGGACTGTACTAAAATAG+TGG | - | chr2_3:24898435-24898454 | None:intergenic | 40.0% | |
| !!! | TGATCCTATCTTTTTGGGTC+AGG | + | chr2_3:24898477-24898496 | Msa0285270:intron | 40.0% |
| CTTGAAAAATATAGGCCTGG+TGG | - | chr2_3:24898503-24898522 | None:intergenic | 40.0% | |
| ! | CACCAGGCCTATATTTTTCA+AGG | + | chr2_3:24898501-24898520 | Msa0285270:intron | 40.0% |
| ACCCTTGAAAAATATAGGCC+TGG | - | chr2_3:24898506-24898525 | None:intergenic | 40.0% | |
| !!! | GGCCTATATTTTTCAAGGGT+TGG | + | chr2_3:24898506-24898525 | Msa0285270:intron | 40.0% |
| !!! | TATTTTTCAAGGGTTGGGTC+GGG | + | chr2_3:24898512-24898531 | Msa0285270:intron | 40.0% |
| !! | TTAGCATCACTTTTAGGGGT+GGG | + | chr2_3:24898854-24898873 | Msa0285270:intron | 40.0% |
| TAGCCTATTTATGCAAAGCC+CGG | - | chr2_3:24898896-24898915 | None:intergenic | 40.0% | |
| AAAAACTAAGGCCTAAGCCT+TGG | + | chr2_3:24898927-24898946 | Msa0285270:intron | 40.0% | |
| CTTTGATAGGTATAAGGCCA+AGG | - | chr2_3:24898947-24898966 | None:intergenic | 40.0% | |
| !! | CTTGGCCTTATACCTATCAA+AGG | + | chr2_3:24898945-24898964 | Msa0285270:intron | 40.0% |
| ! | AGGCTTTTAGACAGGCTAAT+AGG | - | chr2_3:24899015-24899034 | None:intergenic | 40.0% |
| ! | CACAAACTAGGCTTTTAGAC+AGG | - | chr2_3:24899023-24899042 | None:intergenic | 40.0% |
| AAAAGCCTATCAAGCCTATC+AGG | - | chr2_3:24899371-24899390 | None:intergenic | 40.0% | |
| !!! | TTTTGAAATAAGGGTTGGGC+CGG | + | chr2_3:24899571-24899590 | Msa0285270:intron | 40.0% |
| !! | CATATAAATGGGTTGAAGGG+GGG | - | chr2_3:24899670-24899689 | None:intergenic | 40.0% |
| ACTAGAGTTGTCAAATGGAC+CGG | - | chr2_3:24899728-24899747 | None:intergenic | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | + | chr2_3:24900550-24900569 | Msa0285270:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr2_3:24900735-24900754 | Msa0285270:intron | 40.0% | |
| ! | TTGGGGTTTGATAGCTCAAT+TGG | - | chr2_3:24900934-24900953 | None:intergenic | 40.0% |
| ! | AAGGCCATGTTTGGAATCAA+TGG | - | chr2_3:24901133-24901152 | None:intergenic | 40.0% |
| ATTCCAAACATGGCCTTTGT+GGG | + | chr2_3:24901136-24901155 | Msa0285270:CDS | 40.0% | |
| ACTCTCAACATAACCCACAA+AGG | - | chr2_3:24901152-24901171 | None:intergenic | 40.0% | |
| CTCACAAACCATTAAGGACA+TGG | + | chr2_3:24901264-24901283 | Msa0285270:CDS | 40.0% | |
| ! | AGGAACTGCATCACAACTTT+TGG | + | chr2_3:24901319-24901338 | Msa0285270:CDS | 40.0% |
| !! | AAGATTTGGGTTGGCATACT+TGG | + | chr2_3:24901368-24901387 | Msa0285270:CDS | 40.0% |
| TTATAGTCAGCAGCAGTGTA+AGG | - | chr2_3:24901427-24901446 | None:intergenic | 40.0% | |
| GGGTTGTCTTTAGTCAGCAT+AGG | - | chr2_3:24895344-24895363 | None:intergenic | 45.0% | |
| AACACCACCAATTGAATCGG+TGG | - | chr2_3:24895465-24895484 | None:intergenic | 45.0% | |
| !! | CCGATTCAATTGGTGGTGTT+TGG | + | chr2_3:24895465-24895484 | Msa0285270:CDS | 45.0% |
| CCAATATCTCAGCGTGAGAA+GGG | - | chr2_3:24895586-24895605 | None:intergenic | 45.0% | |
| TCCAATATCTCAGCGTGAGA+AGG | - | chr2_3:24895587-24895606 | None:intergenic | 45.0% | |
| GATTTCCATGGTCACTAGGT+AGG | - | chr2_3:24895721-24895740 | None:intergenic | 45.0% | |
| GTTCAGGCAAAGGATTTCCA+TGG | - | chr2_3:24895733-24895752 | None:intergenic | 45.0% | |
| ! | GGCATTGTTTGTCCCTTTTC+AGG | + | chr2_3:24896004-24896023 | Msa0285270:intron | 45.0% |
| CAAGGAAGGACACCTGAAAA+GGG | - | chr2_3:24896019-24896038 | None:intergenic | 45.0% | |
| ACAAGGAAGGACACCTGAAA+AGG | - | chr2_3:24896020-24896039 | None:intergenic | 45.0% | |
| ! | GAGTTTGTAGTGGTTTGCAC+TGG | + | chr2_3:24896272-24896291 | Msa0285270:CDS | 45.0% |
| GCCAACATTTCCATGCAACA+AGG | + | chr2_3:24896319-24896338 | Msa0285270:CDS | 45.0% | |
| CCCTTGTTGCATGGAAATGT+TGG | - | chr2_3:24896323-24896342 | None:intergenic | 45.0% | |
| GGAAAGAAGGTTGTGGTTGT+GGG | + | chr2_3:24896425-24896444 | Msa0285270:CDS | 45.0% | |
| TTTAGCCATGGAGTGTGTAC+AGG | + | chr2_3:24896469-24896488 | Msa0285270:CDS | 45.0% | |
| ACTCCCCACATCCTATAATG+TGG | - | chr2_3:24896922-24896941 | None:intergenic | 45.0% | |
| CTTCACCATACACCAAACCA+GGG | + | chr2_3:24896982-24897001 | Msa0285270:CDS | 45.0% | |
| !! | GTAAACCCTGGTTTGGTGTA+TGG | - | chr2_3:24896990-24897009 | None:intergenic | 45.0% |
| GATGAACCTAGTTCGATCGT+AGG | + | chr2_3:24897242-24897261 | Msa0285270:intron | 45.0% | |
| TTGACTCCTACGATCGAACT+AGG | - | chr2_3:24897251-24897270 | None:intergenic | 45.0% | |
| ! | GAAACCAGAACACCCTTTTC+AGG | + | chr2_3:24897691-24897710 | Msa0285270:CDS | 45.0% |
| !! | TCTTCCTGAAAAGGGTGTTC+TGG | - | chr2_3:24897698-24897717 | None:intergenic | 45.0% |
| !! | TCAAGAGAGCATCAAAGTGG+TGG | + | chr2_3:24897789-24897808 | Msa0285270:CDS | 45.0% |
| ! | GAGCATCAAAGTGGTGGTTT+TGG | + | chr2_3:24897795-24897814 | Msa0285270:CDS | 45.0% |
| !!! | AAGTGGTGGTTTTGGAATGG+AGG | + | chr2_3:24897803-24897822 | Msa0285270:CDS | 45.0% |
| !! | AGCTTGTTGGAATACCCTAC+TGG | + | chr2_3:24897932-24897951 | Msa0285270:CDS | 45.0% |
| CTGGTATCATGCCATTGTAC+AGG | + | chr2_3:24897951-24897970 | Msa0285270:CDS | 45.0% | |
| GCTGAGTATGTTGAATGGAG+GGG | - | chr2_3:24898288-24898307 | None:intergenic | 45.0% | |
| ATAGAGCTGTCAAAATGGGC+CGG | + | chr2_3:24898386-24898405 | Msa0285270:intron | 45.0% | |
| !! | CTTAGCATCACTTTTAGGGG+TGG | + | chr2_3:24898853-24898872 | Msa0285270:intron | 45.0% |
| TATTTATGCAAAGCCCGGCT+CGG | - | chr2_3:24898891-24898910 | None:intergenic | 45.0% | |
| GGGCTTTGCATAAATAGGCT+AGG | + | chr2_3:24898895-24898914 | Msa0285270:intron | 45.0% | |
| TAGGTATAAGGCCAAGGCTT+AGG | - | chr2_3:24898941-24898960 | None:intergenic | 45.0% | |
| !!! | GCTTTATTTTAAGCCTGGCC+TGG | + | chr2_3:24898967-24898986 | Msa0285270:intron | 45.0% |
| !! | GTCAGGCTTTTAAAAAGGCC+AGG | - | chr2_3:24898988-24899007 | None:intergenic | 45.0% |
| ACAGGCTAATAGGTCAAGTC+AGG | - | chr2_3:24899005-24899024 | None:intergenic | 45.0% | |
| AAGTGATTAGGGGTGGGAAT+AGG | - | chr2_3:24899527-24899546 | None:intergenic | 45.0% | |
| AGCCAAGCCCAATTAGTAGT+GGG | - | chr2_3:24899614-24899633 | None:intergenic | 45.0% | |
| AAGCCAAGCCCAATTAGTAG+TGG | - | chr2_3:24899615-24899634 | None:intergenic | 45.0% | |
| ! | GGTCGGCCCACTTTATTTAT+GGG | - | chr2_3:24899649-24899668 | None:intergenic | 45.0% |
| ATTACATACTACCTCCGTCC+CGG | + | chr2_3:24900531-24900550 | Msa0285270:intron | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | - | chr2_3:24900548-24900567 | None:intergenic | 45.0% | |
| GATTCCAAACATGGCCTTTG+TGG | + | chr2_3:24901135-24901154 | Msa0285270:CDS | 45.0% | |
| TAACCCACAAAGGCCATGTT+TGG | - | chr2_3:24901142-24901161 | None:intergenic | 45.0% | |
| AAGCCACATGGAACGTATCT+CGG | - | chr2_3:24901194-24901213 | None:intergenic | 45.0% | |
| TAATAGACCAGCAAGCCACA+TGG | - | chr2_3:24901206-24901225 | None:intergenic | 45.0% | |
| !!! | GAGAGCATTTTCTCAGCACT+TGG | - | chr2_3:24901247-24901266 | None:intergenic | 45.0% |
| CATGGCTTCCATGTCCTTAA+TGG | - | chr2_3:24901275-24901294 | None:intergenic | 45.0% | |
| !! | ATTTGGGTTGGCATACTTGG+AGG | + | chr2_3:24901371-24901390 | Msa0285270:CDS | 45.0% |
| ! | CACTGCTGCTGACTATAAGA+AGG | + | chr2_3:24901429-24901448 | Msa0285270:CDS | 45.0% |
| !!! | ATTTTTTTTAACAATATTAT+AGG | - | chr2_3:24895851-24895870 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAATCTTATTAT+AGG | + | chr2_3:24896099-24896118 | Msa0285270:intron | 5.0% |
| !! | AAAAAAAAAATCTTATTATA+GGG | + | chr2_3:24896100-24896119 | Msa0285270:intron | 5.0% |
| !! | TAAATGATAAAATAATATTT+AGG | + | chr2_3:24900993-24901012 | Msa0285270:intron | 5.0% |
| !! | ATCATAGGTGCTGGAGTGAG+TGG | + | chr2_3:24895389-24895408 | Msa0285270:CDS | 50.0% |
| !! | GAAGCCACCGATTCAATTGG+TGG | + | chr2_3:24895458-24895477 | Msa0285270:CDS | 50.0% |
| CCCTTCTCACGCTGAGATAT+TGG | + | chr2_3:24895583-24895602 | Msa0285270:CDS | 50.0% | |
| TTTGCCTGAACGTCCAGTGT+GGG | + | chr2_3:24895742-24895761 | Msa0285270:CDS | 50.0% | |
| TGAACAGAAAGCTCCCACAC+TGG | - | chr2_3:24895758-24895777 | None:intergenic | 50.0% | |
| ! | AAGGGACCTGAGGTGTTCAA+GGG | + | chr2_3:24896338-24896357 | Msa0285270:CDS | 50.0% |
| ! | ACCTGAGGTGTTCAAGGGTA+AGG | + | chr2_3:24896343-24896362 | Msa0285270:CDS | 50.0% |
| ACCTTACCCTTGAACACCTC+AGG | - | chr2_3:24896347-24896366 | None:intergenic | 50.0% | |
| GGGAAAGAAGGTTGTGGTTG+TGG | + | chr2_3:24896424-24896443 | Msa0285270:CDS | 50.0% | |
| GTTTGCCTGTACACACTCCA+TGG | - | chr2_3:24896477-24896496 | None:intergenic | 50.0% | |
| GAGTGTGTACAGGCAAACCA+AGG | + | chr2_3:24896479-24896498 | Msa0285270:CDS | 50.0% | |
| ATTGTGCATGGTTGCCCTTC+AGG | - | chr2_3:24896871-24896890 | None:intergenic | 50.0% | |
| !! | CCTGGTTTGGTGTATGGTGA+AGG | - | chr2_3:24896984-24897003 | None:intergenic | 50.0% |
| CCTTCACCATACACCAAACC+AGG | + | chr2_3:24896981-24897000 | Msa0285270:CDS | 50.0% | |
| GGATCACGGATCCCATTAGA+CGG | - | chr2_3:24897390-24897409 | None:intergenic | 50.0% | |
| GTATGTTGAATGGAGGGGCA+TGG | - | chr2_3:24898283-24898302 | None:intergenic | 50.0% | |
| !! | AAAATAGTGGGTCGAGGGTC+CGG | - | chr2_3:24898422-24898441 | None:intergenic | 50.0% |
| GTGGCCTGACCCAAAAAGAT+AGG | - | chr2_3:24898484-24898503 | None:intergenic | 50.0% | |
| !! | TTTTAGGGGTGGGAATGAGC+CGG | + | chr2_3:24898864-24898883 | Msa0285270:intron | 50.0% |
| GAGCCGGGCTTTGCATAAAT+AGG | + | chr2_3:24898890-24898909 | Msa0285270:intron | 50.0% | |
| !! | GCTTTTAAAAAGGCCAGGCC+AGG | - | chr2_3:24898983-24899002 | None:intergenic | 50.0% |
| ! | CATATACGGGCTGACCTGAT+AGG | + | chr2_3:24899354-24899373 | Msa0285270:intron | 50.0% |
| GCTGACCTGATAGGCTTGAT+AGG | + | chr2_3:24899363-24899382 | Msa0285270:intron | 50.0% | |
| ! | CTTTTAGTAGGCCGAGCCAT+AGG | + | chr2_3:24899482-24899501 | Msa0285270:intron | 50.0% |
| !! | TAGTGGGCTATACAACGCGA+CGG | - | chr2_3:24899598-24899617 | None:intergenic | 50.0% |
| AGCCCACTACTAATTGGGCT+TGG | + | chr2_3:24899609-24899628 | Msa0285270:intron | 50.0% | |
| ! | GGGTCGGCCCACTTTATTTA+TGG | - | chr2_3:24899650-24899669 | None:intergenic | 50.0% |
| !! | TAAATGGGTTGAAGGGGGGT+CGG | - | chr2_3:24899666-24899685 | None:intergenic | 50.0% |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr2_3:24900739-24900758 | Msa0285270:intron | 50.0% | |
| CATCCGAGATACGTTCCATG+TGG | + | chr2_3:24901188-24901207 | Msa0285270:CDS | 50.0% | |
| ! | ATACGTTCCATGTGGCTTGC+TGG | + | chr2_3:24901196-24901215 | Msa0285270:CDS | 50.0% |
| CACACTGGACGTTCAGGCAA+AGG | - | chr2_3:24895743-24895762 | None:intergenic | 55.0% | |
| CTTTGCCTGAACGTCCAGTG+TGG | + | chr2_3:24895741-24895760 | Msa0285270:CDS | 55.0% | |
| TCCATGCAACAAGGGACCTG+AGG | + | chr2_3:24896328-24896347 | Msa0285270:CDS | 55.0% | |
| ACCTCAGGTCCCTTGTTGCA+TGG | - | chr2_3:24896332-24896351 | None:intergenic | 55.0% | |
| ! | CAAGGGACCTGAGGTGTTCA+AGG | + | chr2_3:24896337-24896356 | Msa0285270:CDS | 55.0% |
| ! | TGAATGGAGGGGCATGGAAG+TGG | - | chr2_3:24898277-24898296 | None:intergenic | 55.0% |
| TCAAAATGGGCCGGACCGAT+CGG | + | chr2_3:24898395-24898414 | Msa0285270:intron | 55.0% | |
| !!! | TCTTTTTGGGTCAGGCCACC+AGG | + | chr2_3:24898485-24898504 | Msa0285270:intron | 55.0% |
| TTTAGGGGTGGGAATGAGCC+GGG | + | chr2_3:24898865-24898884 | Msa0285270:intron | 55.0% | |
| TTAAACGAGCTAGGCCGAGC+CGG | + | chr2_3:24899458-24899477 | Msa0285270:intron | 55.0% | |
| ATTAGGGGTGGGAATAGGCC+AGG | - | chr2_3:24899522-24899541 | None:intergenic | 55.0% | |
| !! | AGTGGGCTATACAACGCGAC+GGG | - | chr2_3:24899597-24899616 | None:intergenic | 55.0% |
| ATGTGATGTTCCACCGGGTC+AGG | + | chr2_3:24899687-24899706 | Msa0285270:intron | 55.0% | |
| TGTGATGTTCCACCGGGTCA+GGG | + | chr2_3:24899688-24899707 | Msa0285270:intron | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | - | chr2_3:24900545-24900564 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr2_3:24900743-24900762 | Msa0285270:intron | 55.0% | |
| ATCTTGTACTCCCTCCGTCC+CGG | - | chr2_3:24900756-24900775 | None:intergenic | 55.0% | |
| GGACGCCTACCTAGTGACCA+TGG | + | chr2_3:24895713-24895732 | Msa0285270:CDS | 60.0% | |
| AGCTCCCACACTGGACGTTC+AGG | - | chr2_3:24895749-24895768 | None:intergenic | 60.0% | |
| CAAAATGGGCCGGACCGATC+GGG | + | chr2_3:24898396-24898415 | Msa0285270:intron | 60.0% | |
| TAAACGAGCTAGGCCGAGCC+GGG | + | chr2_3:24899459-24899478 | Msa0285270:intron | 60.0% | |
| GGCCTACTAAAAGCCCGGCT+CGG | - | chr2_3:24899475-24899494 | None:intergenic | 60.0% | |
| GGCTCGGCCTACTAAAAGCC+CGG | - | chr2_3:24899480-24899499 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr2_3:24900742-24900761 | Msa0285270:intron | 60.0% | |
| TTGGGTCGGGCCAGCCAGTT+AGG | + | chr2_3:24898525-24898544 | Msa0285270:intron | 65.0% | |
| GGGCCAGCCAGTTAGGCTTG+CGG | + | chr2_3:24898532-24898551 | Msa0285270:intron | 65.0% | |
| GGCCAGCCAGTTAGGCTTGC+GGG | + | chr2_3:24898533-24898552 | Msa0285270:intron | 65.0% | |
| AGCCCGCAAGCCTAACTGGC+TGG | - | chr2_3:24898538-24898557 | None:intergenic | 65.0% | |
| GGCAAGCCCGCAAGCCTAAC+TGG | - | chr2_3:24898542-24898561 | None:intergenic | 65.0% | |
| ! | GGCCGAGCCGGGCTTTTAGT+AGG | + | chr2_3:24899470-24899489 | Msa0285270:intron | 65.0% |
| GGCTATACAACGCGACGGGC+CGG | - | chr2_3:24899593-24899612 | None:intergenic | 65.0% | |
| GATGTTCCACCGGGTCAGGG+CGG | + | chr2_3:24899691-24899710 | Msa0285270:intron | 65.0% | |
| ATGTTCCACCGGGTCAGGGC+GGG | + | chr2_3:24899692-24899711 | Msa0285270:intron | 65.0% | |
| !! | ATGCAAAGCCCGGCTCGGCC+CGG | - | chr2_3:24898886-24898905 | None:intergenic | 70.0% |
| GCCGAGCCATAGGCCCCTGA+CGG | + | chr2_3:24899492-24899511 | Msa0285270:intron | 70.0% | |
| CCCGTCAGGGGCCTATGGCT+CGG | - | chr2_3:24899496-24899515 | None:intergenic | 70.0% | |
| CCGAGCCATAGGCCCCTGAC+GGG | + | chr2_3:24899493-24899512 | Msa0285270:intron | 70.0% | |
| AGCCATAGGCCCCTGACGGG+CGG | + | chr2_3:24899496-24899515 | Msa0285270:intron | 70.0% | |
| ATAGGCCAGGCCGCCCGTCA+GGG | - | chr2_3:24899509-24899528 | None:intergenic | 70.0% | |
| AATAGGCCAGGCCGCCCGTC+AGG | - | chr2_3:24899510-24899529 | None:intergenic | 70.0% | |
| CGACCTAACCCGCCCTGACC+CGG | - | chr2_3:24899703-24899722 | None:intergenic | 70.0% | |
| !! | CGGGTCAGGGCGGGTTAGGT+CGG | + | chr2_3:24899701-24899720 | Msa0285270:intron | 70.0% |
| !! | GGGTCAGGGCGGGTTAGGTC+GGG | + | chr2_3:24899702-24899721 | Msa0285270:intron | 70.0% |
| ATGGGCCGGACCGATCGGGC+CGG | + | chr2_3:24898400-24898419 | Msa0285270:intron | 75.0% | |
| AGGGTCCGGCCCGATCGGTC+CGG | - | chr2_3:24898408-24898427 | None:intergenic | 75.0% | |
| GGTCGAGGGTCCGGCCCGAT+CGG | - | chr2_3:24898413-24898432 | None:intergenic | 75.0% | |
| GGGAATGAGCCGGGCCGAGC+CGG | + | chr2_3:24898874-24898893 | Msa0285270:intron | 75.0% | |
| GGAATGAGCCGGGCCGAGCC+GGG | + | chr2_3:24898875-24898894 | Msa0285270:intron | 75.0% | |
| TAGGCCAGGCCGCCCGTCAG+GGG | - | chr2_3:24899508-24899527 | None:intergenic | 75.0% | |
| CCTAACCCGCCCTGACCCGG+TGG | - | chr2_3:24899700-24899719 | None:intergenic | 75.0% | |
| ! | CCACCGGGTCAGGGCGGGTT+AGG | + | chr2_3:24899697-24899716 | Msa0285270:intron | 75.0% |
| !! | CAGGGCGGGTTAGGTCGGGC+CGG | + | chr2_3:24899706-24899725 | Msa0285270:intron | 75.0% |
| ! | GGCCGCCCGTCAGGGGCCTA+TGG | - | chr2_3:24899501-24899520 | None:intergenic | 80.0% |
| !! | TAGGCCCCTGACGGGCGGCC+TGG | + | chr2_3:24899501-24899520 | Msa0285270:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 24895311 | 24901524 | 24895311 | ID=Msa0285270;Name=Msa0285270 |
| chr2_3 | mRNA | 24895311 | 24901524 | 24895311 | ID=Msa0285270-mRNA-1;Parent=Msa0285270;Name=Msa0285270-mRNA-1;_AED=0.05;_eAED=0.05;_QI=33|1|1|1|1|1|5|65|523 |
| chr2_3 | exon | 24895311 | 24895802 | 24895311 | ID=Msa0285270-mRNA-1:exon:9311;Parent=Msa0285270-mRNA-1 |
| chr2_3 | exon | 24896260 | 24896500 | 24896260 | ID=Msa0285270-mRNA-1:exon:9312;Parent=Msa0285270-mRNA-1 |
| chr2_3 | exon | 24896866 | 24897044 | 24896866 | ID=Msa0285270-mRNA-1:exon:9313;Parent=Msa0285270-mRNA-1 |
| chr2_3 | exon | 24897623 | 24897972 | 24897623 | ID=Msa0285270-mRNA-1:exon:9314;Parent=Msa0285270-mRNA-1 |
| chr2_3 | exon | 24901117 | 24901524 | 24901117 | ID=Msa0285270-mRNA-1:exon:9315;Parent=Msa0285270-mRNA-1 |
| chr2_3 | five_prime_UTR | 24895311 | 24895343 | 24895311 | ID=Msa0285270-mRNA-1:five_prime_utr;Parent=Msa0285270-mRNA-1 |
| chr2_3 | CDS | 24895344 | 24895802 | 24895344 | ID=Msa0285270-mRNA-1:cds;Parent=Msa0285270-mRNA-1 |
| chr2_3 | CDS | 24896260 | 24896500 | 24896260 | ID=Msa0285270-mRNA-1:cds;Parent=Msa0285270-mRNA-1 |
| chr2_3 | CDS | 24896866 | 24897044 | 24896866 | ID=Msa0285270-mRNA-1:cds;Parent=Msa0285270-mRNA-1 |
| chr2_3 | CDS | 24897623 | 24897972 | 24897623 | ID=Msa0285270-mRNA-1:cds;Parent=Msa0285270-mRNA-1 |
| chr2_3 | CDS | 24901117 | 24901459 | 24901117 | ID=Msa0285270-mRNA-1:cds;Parent=Msa0285270-mRNA-1 |
| chr2_3 | three_prime_UTR | 24901460 | 24901524 | 24901460 | ID=Msa0285270-mRNA-1:three_prime_utr;Parent=Msa0285270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
