Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324120 | XP_013463606.1 | 96.558 | 523 | 18 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1058 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324120 | sp|Q9LMA1|FMO1_ARATH | 62.157 | 510 | 191 | 2 | 12 | 520 | 11 | 519 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0203740 | Msa0324120 | 0.853781 | 1.904865e-61 | -8.615850e-47 |
| Msa0246930 | Msa0324120 | 0.824886 | 6.331376e-54 | -8.615850e-47 |
| Msa0285270 | Msa0324120 | 0.831590 | 1.531167e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324120 | MtrunA17_Chr2g0301471 | 96.558 | 523 | 18 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1058 |
| Msa0324120 | MtrunA17_Chr2g0301661 | 93.881 | 523 | 32 | 0 | 1 | 523 | 1 | 523 | 0.0 | 981 |
| Msa0324120 | MtrunA17_Chr4g0070101 | 66.857 | 525 | 168 | 4 | 1 | 523 | 3 | 523 | 0.0 | 702 |
| Msa0324120 | MtrunA17_Chr4g0070111 | 73.759 | 282 | 74 | 0 | 242 | 523 | 1 | 282 | 6.55e-164 | 466 |
| Msa0324120 | MtrunA17_Chr2g0304721 | 42.248 | 516 | 287 | 8 | 10 | 519 | 1 | 511 | 4.30e-141 | 416 |
| Msa0324120 | MtrunA17_Chr2g0286701 | 82.479 | 234 | 41 | 0 | 1 | 234 | 1 | 234 | 1.48e-140 | 407 |
| Msa0324120 | MtrunA17_Chr2g0305211 | 39.845 | 517 | 301 | 7 | 10 | 519 | 1 | 514 | 2.28e-140 | 415 |
| Msa0324120 | MtrunA17_Chr2g0305231 | 39.845 | 517 | 301 | 7 | 10 | 519 | 1 | 514 | 2.28e-140 | 415 |
| Msa0324120 | MtrunA17_Chr2g0304651 | 39.423 | 520 | 299 | 8 | 10 | 520 | 1 | 513 | 1.04e-134 | 400 |
| Msa0324120 | MtrunA17_Chr4g0070121 | 62.857 | 210 | 75 | 2 | 27 | 234 | 29 | 237 | 4.56e-84 | 260 |
| Msa0324120 | MtrunA17_Chr2g0286671 | 90.385 | 104 | 10 | 0 | 420 | 523 | 1 | 104 | 7.46e-64 | 203 |
| Msa0324120 | MtrunA17_Chr2g0286681 | 72.566 | 113 | 30 | 1 | 284 | 395 | 5 | 117 | 2.13e-53 | 176 |
| Msa0324120 | MtrunA17_Chr2g0286691 | 70.588 | 68 | 20 | 0 | 233 | 300 | 10 | 77 | 7.55e-29 | 109 |
| Msa0324120 | MtrunA17_Chr1g0169111 | 26.178 | 382 | 218 | 16 | 6 | 381 | 94 | 417 | 5.46e-18 | 87.0 |
| Msa0324120 | MtrunA17_Chr7g0262591 | 26.757 | 370 | 204 | 14 | 16 | 381 | 26 | 332 | 3.41e-17 | 84.0 |
| Msa0324120 | MtrunA17_Chr1g0182991 | 25.135 | 370 | 214 | 15 | 16 | 381 | 27 | 337 | 6.45e-17 | 83.2 |
| Msa0324120 | MtrunA17_Chr3g0091441 | 29.752 | 242 | 121 | 8 | 14 | 229 | 13 | 231 | 2.95e-16 | 81.3 |
| Msa0324120 | MtrunA17_Chr1g0148801 | 25.135 | 370 | 211 | 15 | 16 | 381 | 18 | 325 | 4.77e-16 | 80.1 |
| Msa0324120 | MtrunA17_Chr2g0301651 | 90.909 | 33 | 3 | 0 | 420 | 452 | 1 | 33 | 7.07e-14 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324120 | AT1G19250.1 | 62.157 | 510 | 191 | 2 | 12 | 520 | 11 | 519 | 0.0 | 700 |
| Msa0324120 | AT5G45180.1 | 56.495 | 485 | 171 | 4 | 12 | 496 | 11 | 455 | 0.0 | 577 |
| Msa0324120 | AT2G33230.1 | 27.660 | 376 | 201 | 18 | 16 | 381 | 34 | 348 | 4.42e-17 | 84.0 |
| Msa0324120 | AT4G28720.1 | 26.804 | 388 | 210 | 17 | 5 | 381 | 16 | 340 | 3.64e-16 | 81.3 |
| Msa0324120 | AT1G04610.1 | 26.685 | 371 | 211 | 16 | 16 | 381 | 39 | 353 | 3.72e-16 | 81.3 |
| Msa0324120 | AT1G21430.1 | 24.665 | 373 | 207 | 14 | 16 | 381 | 11 | 316 | 2.16e-13 | 72.4 |
| Msa0324120 | AT4G13260.2 | 24.815 | 270 | 163 | 9 | 16 | 283 | 30 | 261 | 3.56e-13 | 70.9 |
| Msa0324120 | AT5G07800.1 | 26.515 | 264 | 138 | 8 | 13 | 246 | 15 | 252 | 3.72e-13 | 72.0 |
| Msa0324120 | AT4G13260.1 | 22.606 | 376 | 231 | 13 | 9 | 381 | 23 | 341 | 4.32e-13 | 71.6 |
| Msa0324120 | AT1G12200.2 | 27.132 | 258 | 133 | 8 | 1 | 230 | 1 | 231 | 5.09e-13 | 71.2 |
| Msa0324120 | AT1G62620.2 | 24.314 | 255 | 135 | 9 | 8 | 233 | 7 | 232 | 6.67e-13 | 70.9 |
| Msa0324120 | AT1G12200.1 | 27.132 | 258 | 133 | 8 | 1 | 230 | 1 | 231 | 7.02e-13 | 71.2 |
| Msa0324120 | AT4G32540.1 | 25.263 | 380 | 212 | 18 | 9 | 381 | 16 | 330 | 7.27e-13 | 70.9 |
| Msa0324120 | AT1G62620.1 | 24.603 | 252 | 132 | 9 | 8 | 230 | 7 | 229 | 7.71e-13 | 70.9 |
| Msa0324120 | AT5G43890.1 | 23.592 | 373 | 219 | 13 | 16 | 381 | 27 | 340 | 9.39e-13 | 70.5 |
| Msa0324120 | AT1G63370.2 | 24.206 | 252 | 133 | 9 | 8 | 230 | 7 | 229 | 1.22e-12 | 69.7 |
| Msa0324120 | AT1G04180.1 | 24.595 | 370 | 216 | 14 | 16 | 381 | 27 | 337 | 1.37e-12 | 70.1 |
| Msa0324120 | AT1G63370.1 | 24.206 | 252 | 133 | 9 | 8 | 230 | 7 | 229 | 1.55e-12 | 70.1 |
| Msa0324120 | AT5G11320.1 | 25.272 | 368 | 211 | 15 | 16 | 381 | 19 | 324 | 3.07e-12 | 68.9 |
| Msa0324120 | AT4G32540.2 | 26.562 | 256 | 144 | 11 | 9 | 262 | 16 | 229 | 3.61e-12 | 68.9 |
| Msa0324120 | AT1G62560.2 | 24.000 | 250 | 131 | 9 | 9 | 230 | 8 | 226 | 3.66e-12 | 68.6 |
| Msa0324120 | AT5G11320.2 | 25.272 | 368 | 211 | 15 | 16 | 381 | 19 | 324 | 4.31e-12 | 68.2 |
| Msa0324120 | AT1G62560.1 | 24.000 | 250 | 131 | 9 | 9 | 230 | 8 | 226 | 5.36e-12 | 68.6 |
| Msa0324120 | AT1G65860.1 | 25.600 | 250 | 126 | 9 | 9 | 230 | 8 | 225 | 1.02e-11 | 67.4 |
| Msa0324120 | AT5G61290.1 | 27.984 | 243 | 127 | 9 | 14 | 231 | 16 | 235 | 1.50e-11 | 67.0 |
| Msa0324120 | AT1G12140.1 | 30.986 | 213 | 107 | 9 | 21 | 227 | 45 | 223 | 9.75e-11 | 64.3 |
| Msa0324120 | AT1G12140.3 | 30.986 | 213 | 107 | 9 | 21 | 227 | 45 | 223 | 9.75e-11 | 64.3 |
Find 131 sgRNAs with CRISPR-Local
Find 464 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTCTCACGCTGAGATTT+TGG | 0.138863 | 2_4:+29379284 | Msa0324120:CDS |
| CATGGCTTCCATGTCCTTAA+TGG | 0.169695 | 2_4:-29385604 | None:intergenic |
| CTTCACAAATTTCATCATTA+TGG | 0.191455 | 2_4:-29385680 | None:intergenic |
| CCAATTCTTGACACCATAAT+TGG | 0.204297 | 2_4:-29379066 | None:intergenic |
| TAATCTTTACTTTCTCTTTC+GGG | 0.206063 | 2_4:-29379261 | None:intergenic |
| TCTCTGGTGTTATAGCTATT+TGG | 0.224222 | 2_4:-29381428 | None:intergenic |
| ATAATCTTTACTTTCTCTTT+CGG | 0.250232 | 2_4:-29379262 | None:intergenic |
| GAGGAAGAAGAACTTGATTA+AGG | 0.284399 | 2_4:+29385722 | Msa0324120:CDS |
| TGATGAAATTTGTGAAGATT+TGG | 0.290590 | 2_4:+29385686 | Msa0324120:CDS |
| GAGCATCAAAGTGGTGGTTT+TGG | 0.290725 | 2_4:+29381493 | Msa0324120:CDS |
| TAAAGACAACCCACCAATTA+TGG | 0.292860 | 2_4:+29379053 | Msa0324120:CDS |
| ATTGGACACTTCCACATTAT+AGG | 0.303294 | 2_4:+29380606 | Msa0324120:CDS |
| AAACTTCCATTAGAGAAGTA+TGG | 0.311043 | 2_4:+29381363 | Msa0324120:CDS |
| CTGATTCAATTGGTGGTGTT+TGG | 0.316589 | 2_4:+29379166 | Msa0324120:CDS |
| TCTTCCTGAAAAGGGTGTTC+TGG | 0.317237 | 2_4:-29381393 | None:intergenic |
| ATTGTGCATGGTTGCCCTTC+AGG | 0.320608 | 2_4:-29380566 | None:intergenic |
| TTCAACCCATACTTCTCTAA+TGG | 0.327648 | 2_4:-29381369 | None:intergenic |
| AGGAACTGCATCACAACTTT+TGG | 0.340506 | 2_4:+29385651 | Msa0324120:CDS |
| AGCTCCCATACCGGACGTTC+AGG | 0.347698 | 2_4:-29379447 | None:intergenic |
| TATTCCAACAAGCTAGAAAA+AGG | 0.349311 | 2_4:-29381621 | None:intergenic |
| GAGATAATAGGAGGCATAAA+AGG | 0.351598 | 2_4:-29380715 | None:intergenic |
| GGGAAAGAAGGTTGTGGTTG+TGG | 0.353865 | 2_4:+29380122 | Msa0324120:CDS |
| ATACGTTCCATGTGGCTTGC+TGG | 0.361433 | 2_4:+29385528 | Msa0324120:CDS |
| AATGCTCTCACAAACCATTA+AGG | 0.368860 | 2_4:+29385590 | Msa0324120:CDS |
| GATGAAATTTGTGAAGATTT+GGG | 0.369050 | 2_4:+29385687 | Msa0324120:CDS |
| AAGATTTGGGTTGGCATACT+TGG | 0.370246 | 2_4:+29385700 | Msa0324120:CDS |
| TAATGAATCAGACGCCATTC+AGG | 0.375341 | 2_4:+29379482 | Msa0324120:CDS |
| AGCTACTAGTGACCTTGTTA+AGG | 0.378740 | 2_4:+29380101 | Msa0324120:CDS |
| TTTGGAGACATTGTTCCTAT+AGG | 0.379655 | 2_4:+29379184 | Msa0324120:CDS |
| GGTTGAAATCAAGTTTGTTC+GGG | 0.381102 | 2_4:+29379371 | Msa0324120:CDS |
| TATATACCATTGGAGATAAT+AGG | 0.388000 | 2_4:-29380727 | None:intergenic |
| CCAATTATGGTGTCAAGAAT+TGG | 0.392328 | 2_4:+29379066 | Msa0324120:CDS |
| TAACCCACAAAGGCCATGTT+TGG | 0.399285 | 2_4:-29385471 | None:intergenic |
| GATGTTGTTCTTCTTGCAAC+TGG | 0.404238 | 2_4:+29381558 | Msa0324120:CDS |
| TGGTTGAAATCAAGTTTGTT+CGG | 0.406466 | 2_4:+29379370 | Msa0324120:CDS |
| GATTCCAAACATGGCCTTTG+TGG | 0.406988 | 2_4:+29385467 | Msa0324120:CDS |
| GGAAAGAAGGTTGTGGTTGT+GGG | 0.417388 | 2_4:+29380123 | Msa0324120:CDS |
| GATGCAAAATCTTCCTGAAA+AGG | 0.421541 | 2_4:-29381402 | None:intergenic |
| GTGGTTTGCACTGGAAAATA+TGG | 0.430049 | 2_4:+29379979 | Msa0324120:CDS |
| CTTCTTGCAACTGGTTATGA+TGG | 0.433437 | 2_4:+29381567 | Msa0324120:CDS |
| AAACTTGATTTCAACCACTT+TGG | 0.433707 | 2_4:-29379364 | None:intergenic |
| CTTGAACAAATCAAAATAAA+CGG | 0.441646 | 2_4:-29379325 | None:intergenic |
| GTAAACCCTGGTTTGGTGTA+TGG | 0.444256 | 2_4:-29380685 | None:intergenic |
| CAAGGGACCTGAGGTGTTCA+AGG | 0.445930 | 2_4:+29380035 | Msa0324120:CDS |
| CATGGAAATGTTGGCATCAA+TGG | 0.446961 | 2_4:-29380009 | None:intergenic |
| AGCTTGTTGGAATACCCTAC+TGG | 0.447714 | 2_4:+29381630 | Msa0324120:CDS |
| GTGTCAAGAATTGGTATCAT+AGG | 0.455100 | 2_4:+29379075 | Msa0324120:CDS |
| AAATCCTTTGCCTGAACGTC+CGG | 0.456957 | 2_4:+29379437 | Msa0324120:CDS |
| AAGGCCATGTTTGGAATCAA+TGG | 0.465986 | 2_4:-29385462 | None:intergenic |
| CTTTGCCTGAACGTCCGGTA+TGG | 0.469197 | 2_4:+29379442 | Msa0324120:CDS |
| TTATAATCAGCAGCAGTGTA+AGG | 0.469640 | 2_4:-29385756 | None:intergenic |
| GCTACTAGTGACCTTGTTAA+GGG | 0.472706 | 2_4:+29380102 | Msa0324120:CDS |
| CACTTCCACATTATAGGATG+TGG | 0.475745 | 2_4:+29380612 | Msa0324120:CDS |
| ATTCCAAACATGGCCTTTGT+GGG | 0.477703 | 2_4:+29385468 | Msa0324120:CDS |
| GGTTGTCTTTAGTCAGCATA+GGG | 0.478049 | 2_4:-29379041 | None:intergenic |
| ACCTGAGGTGTTCAAGGGTA+AGG | 0.478572 | 2_4:+29380041 | Msa0324120:CDS |
| TACTTTCTCTTTCGGGCCAA+GGG | 0.481416 | 2_4:-29379254 | None:intergenic |
| TGACCTTGTTAAGGGAAAGA+AGG | 0.483185 | 2_4:+29380110 | Msa0324120:CDS |
| ATGCAAAATCTTCCTGAAAA+GGG | 0.485125 | 2_4:-29381401 | None:intergenic |
| AACCATGCACAATGATCATA+AGG | 0.486955 | 2_4:+29380576 | Msa0324120:CDS |
| TTTAGCCATGGAGTGTGTAC+AGG | 0.489929 | 2_4:+29380167 | Msa0324120:CDS |
| AGAATTGGTATCATAGGTGC+TGG | 0.492588 | 2_4:+29379081 | Msa0324120:CDS |
| TTTGAAGCCACTGATTCAAT+TGG | 0.492788 | 2_4:+29379156 | Msa0324120:CDS |
| TTTGCCTGAACGTCCGGTAT+GGG | 0.493505 | 2_4:+29379443 | Msa0324120:CDS |
| GGGTTGTCTTTAGTCAGCAT+AGG | 0.496524 | 2_4:-29379042 | None:intergenic |
| CCTTCACCATACACCAAACC+AGG | 0.500334 | 2_4:+29380679 | Msa0324120:CDS |
| TTCTTGCAACTGGTTATGAT+GGG | 0.506089 | 2_4:+29381568 | Msa0324120:CDS |
| AACTTCCATTAGAGAAGTAT+GGG | 0.506741 | 2_4:+29381364 | Msa0324120:CDS |
| TTACTTTCTCTTTCGGGCCA+AGG | 0.509344 | 2_4:-29379255 | None:intergenic |
| GAGTTTGTAGTGGTTTGCAC+TGG | 0.512700 | 2_4:+29379970 | Msa0324120:CDS |
| ATGCCTCCTATTATCTCCAA+TGG | 0.513080 | 2_4:+29380721 | Msa0324120:CDS |
| AAGTTTGTTCGGGACAAAGA+AGG | 0.514045 | 2_4:+29379381 | Msa0324120:CDS |
| ACCTCAGGTCCCTTGTTGCA+TGG | 0.517460 | 2_4:-29380027 | None:intergenic |
| CACTGCTGCTGATTATAAGA+AGG | 0.519374 | 2_4:+29385761 | Msa0324120:CDS |
| ACGAGTTTAGTGATTTCCCT+TGG | 0.521869 | 2_4:+29379238 | Msa0324120:CDS |
| TTGAAGCTTAGTACACCTAT+AGG | 0.522294 | 2_4:-29379199 | None:intergenic |
| ACCTTACCCTTGAACACCTC+AGG | 0.522344 | 2_4:-29380042 | None:intergenic |
| TGATCATAAGGAGTTTGCAT+TGG | 0.525875 | 2_4:+29380588 | Msa0324120:CDS |
| ATTCTTGACACCATAATTGG+TGG | 0.526017 | 2_4:-29379063 | None:intergenic |
| CAACCTTCTTTCCCTTAACA+AGG | 0.529813 | 2_4:-29380113 | None:intergenic |
| GAAGCCACTGATTCAATTGG+TGG | 0.530458 | 2_4:+29379159 | Msa0324120:CDS |
| CCCTTGTTGCATGGAAATGT+TGG | 0.530793 | 2_4:-29380018 | None:intergenic |
| TCCAAAATCTCAGCGTGAGA+AGG | 0.537293 | 2_4:-29379285 | None:intergenic |
| AAGCCACATGGAACGTATCT+CGG | 0.538091 | 2_4:-29385523 | None:intergenic |
| ATTTGGGTTGGCATACTTGG+AGG | 0.538869 | 2_4:+29385703 | Msa0324120:CDS |
| CTGGGATCATGCCATTGTAC+AGG | 0.541643 | 2_4:+29381649 | Msa0324120:CDS |
| AAATTTGTGAAGATTTGGGT+TGG | 0.542822 | 2_4:+29385691 | Msa0324120:CDS |
| AAAGGATTTCCATGGTCACC+AGG | 0.547280 | 2_4:-29379423 | None:intergenic |
| GTTTGCCTGTACACACTCCA+TGG | 0.550549 | 2_4:-29380172 | None:intergenic |
| ACTTGTTATGAAGGACCTGA+AGG | 0.551898 | 2_4:+29380551 | Msa0324120:intron |
| TTCTTGACACCATAATTGGT+GGG | 0.552760 | 2_4:-29379062 | None:intergenic |
| ATCAGCTATTGATTTAGCCA+TGG | 0.562783 | 2_4:+29380155 | Msa0324120:CDS |
| TCATCCATTGATTCCAAACA+TGG | 0.563445 | 2_4:+29385458 | Msa0324120:CDS |
| CTAAGCTTCAATCACAAACA+TGG | 0.565933 | 2_4:+29379211 | Msa0324120:CDS |
| ATTTGTGTTTACCTGTACAA+TGG | 0.566886 | 2_4:-29381660 | None:intergenic |
| TCCATGCAACAAGGGACCTG+AGG | 0.570241 | 2_4:+29380026 | Msa0324120:CDS |
| TGTTAAGGGAAAGAAGGTTG+TGG | 0.573393 | 2_4:+29380116 | Msa0324120:CDS |
| CATACCGGACGTTCAGGCAA+AGG | 0.579127 | 2_4:-29379441 | None:intergenic |
| TGGAAGTTTCCACAGTAAGT+AGG | 0.579702 | 2_4:-29381349 | None:intergenic |
| CTCACAAACCATTAAGGACA+TGG | 0.585097 | 2_4:+29385596 | Msa0324120:CDS |
| CTTGTTATGAAGGACCTGAA+GGG | 0.589620 | 2_4:+29380552 | Msa0324120:intron |
| ACTTCCACATTATAGGATGT+GGG | 0.591116 | 2_4:+29380613 | Msa0324120:CDS |
| GTACTACTTCGAGTTTGTAG+TGG | 0.591776 | 2_4:+29379960 | Msa0324120:CDS |
| ATCATAGGTGCTGGAGTGAG+TGG | 0.592554 | 2_4:+29379090 | Msa0324120:CDS |
| GTTCAGGCAAAGGATTTCCA+TGG | 0.599336 | 2_4:-29379431 | None:intergenic |
| GCCAACATTTCCATGCAACA+AGG | 0.599576 | 2_4:+29380017 | Msa0324120:CDS |
| TACAATGGCATGATCCCAGT+AGG | 0.602553 | 2_4:-29381645 | None:intergenic |
| GATTTCCATGGTCACCAGGT+AGG | 0.604968 | 2_4:-29379419 | None:intergenic |
| AAAGTGAATAAAGACCTGAA+TGG | 0.607315 | 2_4:-29379496 | None:intergenic |
| GGACGCCTACCTGGTGACCA+TGG | 0.607894 | 2_4:+29379414 | Msa0324120:CDS |
| TGAACAGAAAGCTCCCATAC+CGG | 0.607947 | 2_4:-29379456 | None:intergenic |
| TGTTAAGTTCAACACCAAAG+TGG | 0.611740 | 2_4:+29379350 | Msa0324120:CDS |
| AACACCACCAATTGAATCAG+TGG | 0.613507 | 2_4:-29379163 | None:intergenic |
| ATACCATTGGAGATAATAGG+AGG | 0.618461 | 2_4:-29380724 | None:intergenic |
| AAGGGACCTGAGGTGTTCAA+GGG | 0.619139 | 2_4:+29380036 | Msa0324120:CDS |
| CTCCTTATGATCATTGTGCA+TGG | 0.626136 | 2_4:-29380578 | None:intergenic |
| TCAAGAGAGCATCAAAGTGG+TGG | 0.626330 | 2_4:+29381487 | Msa0324120:CDS |
| TCATAGAGTCCTACTTACTG+TGG | 0.632816 | 2_4:+29381340 | Msa0324120:CDS |
| ACTCCCCACATCCTATAATG+TGG | 0.633850 | 2_4:-29380617 | None:intergenic |
| GCTTGTTGGAATACCCTACT+GGG | 0.641165 | 2_4:+29381631 | Msa0324120:CDS |
| TAATAGACCAGCAAGCCACA+TGG | 0.644884 | 2_4:-29385535 | None:intergenic |
| GAAGAAGAACTTGATTAAGG+AGG | 0.645161 | 2_4:+29385725 | Msa0324120:CDS |
| CTTCCACATTATAGGATGTG+GGG | 0.652290 | 2_4:+29380614 | Msa0324120:CDS |
| CCTGGTTTGGTGTATGGTGA+AGG | 0.657784 | 2_4:-29380679 | None:intergenic |
| ACAATGGCATGATCCCAGTA+GGG | 0.663912 | 2_4:-29381644 | None:intergenic |
| CTTCACCATACACCAAACCA+GGG | 0.675353 | 2_4:+29380680 | Msa0324120:CDS |
| ACTCTCAACATAACCCACAA+AGG | 0.682237 | 2_4:-29385481 | None:intergenic |
| TCTTCAAGAGAGCATCAAAG+TGG | 0.688034 | 2_4:+29381484 | Msa0324120:CDS |
| GAGTGTGTACAGGCAAACCA+AGG | 0.694042 | 2_4:+29380177 | Msa0324120:CDS |
| CCAACATTTCCATGCAACAA+GGG | 0.700966 | 2_4:+29380018 | Msa0324120:CDS |
| CATCCGAGATACGTTCCATG+TGG | 0.741395 | 2_4:+29385520 | Msa0324120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTATATTTTTTTT+TGG | - | chr2_4:29384947-29384966 | None:intergenic | 0.0% |
| !! | AAAAATAAAATCTTATATAG+GGG | + | chr2_4:29379800-29379819 | Msa0324120:intron | 10.0% |
| !!! | AGAAAAAAATTACTTTTTTA+AGG | + | chr2_4:29380808-29380827 | Msa0324120:intron | 10.0% |
| !!! | AAAAAAAAGTCATTTAATTT+TGG | - | chr2_4:29381842-29381861 | None:intergenic | 10.0% |
| !!! | TAGTTTTTAGTATTTTTAAT+GGG | - | chr2_4:29382261-29382280 | None:intergenic | 10.0% |
| !!! | ATAGTTTTTAGTATTTTTAA+TGG | - | chr2_4:29382262-29382281 | None:intergenic | 10.0% |
| !! | TACTAAAAACTATTAATATT+AGG | + | chr2_4:29382269-29382288 | Msa0324120:intron | 10.0% |
| !! | AAAATTAGAGAAAAAAATTA+GGG | - | chr2_4:29382613-29382632 | None:intergenic | 10.0% |
| !! | AAAAATTAGAGAAAAAAATT+AGG | - | chr2_4:29382614-29382633 | None:intergenic | 10.0% |
| !!! | ATTTGTTTCTTAATAAAAAA+TGG | - | chr2_4:29382767-29382786 | None:intergenic | 10.0% |
| !!! | TTTTATTAAGAAACAAATTA+AGG | + | chr2_4:29382769-29382788 | Msa0324120:intron | 10.0% |
| !!! | AAAAATTGAGATTTTTTAAA+GGG | + | chr2_4:29383030-29383049 | Msa0324120:intron | 10.0% |
| !!! | ATTTTTTTAAAAAGTGATTA+GGG | - | chr2_4:29384115-29384134 | None:intergenic | 10.0% |
| !!! | AAATAATACATTTTGAAATA+AGG | + | chr2_4:29384138-29384157 | Msa0324120:intron | 10.0% |
| !!! | AATAATACATTTTGAAATAA+GGG | + | chr2_4:29384139-29384158 | Msa0324120:intron | 10.0% |
| !!! | AATTAAACAAACTTAATTTT+AGG | - | chr2_4:29384538-29384557 | None:intergenic | 10.0% |
| !! | TTTAAAAATTTAAGAGTTTA+AGG | - | chr2_4:29384563-29384582 | None:intergenic | 10.0% |
| !! | ATAACTATTAAAATTATGTA+AGG | + | chr2_4:29384882-29384901 | Msa0324120:intron | 10.0% |
| !!! | AAGTTGATAGTAAAATAATT+AGG | - | chr2_4:29379929-29379948 | None:intergenic | 15.0% |
| !!! | TTTTTTAAAAGGGTTAAAAT+TGG | - | chr2_4:29382352-29382371 | None:intergenic | 15.0% |
| !!! | ACATGAATTGTTAATTTTTT+GGG | - | chr2_4:29382641-29382660 | None:intergenic | 15.0% |
| !!! | TACATGAATTGTTAATTTTT+TGG | - | chr2_4:29382642-29382661 | None:intergenic | 15.0% |
| !!! | GAAAAATTGAGATTTTTTAA+AGG | + | chr2_4:29383029-29383048 | Msa0324120:intron | 15.0% |
| !!! | ATTTTTTAAAGGGTTAAAAT+TGG | + | chr2_4:29383040-29383059 | Msa0324120:intron | 15.0% |
| !!! | TTTATGGTATTTATCTTTTA+TGG | + | chr2_4:29383151-29383170 | Msa0324120:intron | 15.0% |
| !!! | TGATTTAATATATGTTTTTG+TGG | + | chr2_4:29383178-29383197 | Msa0324120:intron | 15.0% |
| !! | ATCAAAAAGAATTACTAATA+TGG | - | chr2_4:29383840-29383859 | None:intergenic | 15.0% |
| !! | AAATGTAATATACTCATATA+CGG | + | chr2_4:29383917-29383936 | Msa0324120:intron | 15.0% |
| !!! | TTTTTTTAAAAAGTGATTAG+GGG | - | chr2_4:29384114-29384133 | None:intergenic | 15.0% |
| !!! | CATTTTTTTAAAAAGTGATT+AGG | - | chr2_4:29384116-29384135 | None:intergenic | 15.0% |
| !!! | AATTTTATAGACTATAATAG+TGG | - | chr2_4:29384373-29384392 | None:intergenic | 15.0% |
| !!! | ATATCTAACCTTTTATTTTT+GGG | - | chr2_4:29384417-29384436 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTTAGTA+AGG | - | chr2_4:29384475-29384494 | None:intergenic | 15.0% |
| !! | GAAATTAAAAAAATGAAACT+TGG | - | chr2_4:29385383-29385402 | None:intergenic | 15.0% |
| !! | GAAAAAAATTGGACTTTATT+AGG | - | chr2_4:29379013-29379032 | None:intergenic | 20.0% |
| !! | ATAATCTTTACTTTCTCTTT+CGG | - | chr2_4:29379265-29379284 | None:intergenic | 20.0% |
| !! | CTTGAACAAATCAAAATAAA+CGG | - | chr2_4:29379328-29379347 | None:intergenic | 20.0% |
| !! | AAACAAGCATATTAAACAAT+TGG | + | chr2_4:29379684-29379703 | Msa0324120:intron | 20.0% |
| !! | CAACATGTAAACTAAATTAA+AGG | - | chr2_4:29379876-29379895 | None:intergenic | 20.0% |
| !!! | GTCTAAATATTTTAACATAG+TGG | - | chr2_4:29380292-29380311 | None:intergenic | 20.0% |
| !! | AAATATTTAGACAAATACCT+CGG | + | chr2_4:29380300-29380319 | Msa0324120:intron | 20.0% |
| !!! | TTAACTATATTTTAATACCG+AGG | - | chr2_4:29380320-29380339 | None:intergenic | 20.0% |
| !! | ATTTCACAATGAAAGTAATT+GGG | - | chr2_4:29380500-29380519 | None:intergenic | 20.0% |
| !! | TATTTCACAATGAAAGTAAT+TGG | - | chr2_4:29380501-29380520 | None:intergenic | 20.0% |
| !! | TGATGTACAAATATAGTATT+CGG | + | chr2_4:29380883-29380902 | Msa0324120:intron | 20.0% |
| !! | TTAATTATTGTCTTTATGCT+TGG | + | chr2_4:29381155-29381174 | Msa0324120:intron | 20.0% |
| !! | TTTAGATTGAGTATATTGAT+TGG | - | chr2_4:29381716-29381735 | None:intergenic | 20.0% |
| !! | ATTATACTCCTTCTAAATTT+AGG | + | chr2_4:29382052-29382071 | Msa0324120:intron | 20.0% |
| !! | TAATACATCCTAAATTTAGA+AGG | - | chr2_4:29382063-29382082 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCATGCTTTTTTA+CGG | - | chr2_4:29382156-29382175 | None:intergenic | 20.0% |
| !! | AAGAATTCAATTCAATTGAT+TGG | - | chr2_4:29382707-29382726 | None:intergenic | 20.0% |
| !! | AATAAAAAATGGTAATCTCA+AGG | - | chr2_4:29382756-29382775 | None:intergenic | 20.0% |
| !! | TTCAAATAAGTTGTAAAGTA+CGG | + | chr2_4:29382842-29382861 | Msa0324120:intron | 20.0% |
| !! | ATCACATTAAGAACAAAATT+TGG | - | chr2_4:29382919-29382938 | None:intergenic | 20.0% |
| !! | ATGCATGCAAAATAATATTA+AGG | - | chr2_4:29383123-29383142 | None:intergenic | 20.0% |
| !!! | TTAATATTATTTTGCATGCA+TGG | + | chr2_4:29383122-29383141 | Msa0324120:intron | 20.0% |
| !! | ACAACTGTAAAATTTATAGA+TGG | + | chr2_4:29383695-29383714 | Msa0324120:intron | 20.0% |
| !! | AATGTAATATACTCATATAC+GGG | + | chr2_4:29383918-29383937 | Msa0324120:intron | 20.0% |
| !!! | CATATCTAACCTTTTATTTT+TGG | - | chr2_4:29384418-29384437 | None:intergenic | 20.0% |
| !!! | TAAAAGGTTAGATATGTTTT+TGG | + | chr2_4:29384422-29384441 | Msa0324120:intron | 20.0% |
| !!! | TAGAAGTTCTCAATTTTATA+GGG | - | chr2_4:29384449-29384468 | None:intergenic | 20.0% |
| !!! | TTAGAAGTTCTCAATTTTAT+AGG | - | chr2_4:29384450-29384469 | None:intergenic | 20.0% |
| !!! | AAACAAACTTAATTTTAGGA+GGG | - | chr2_4:29384534-29384553 | None:intergenic | 20.0% |
| !!! | TAAACAAACTTAATTTTAGG+AGG | - | chr2_4:29384535-29384554 | None:intergenic | 20.0% |
| !!! | CACATTTAGAACAATATAAA+AGG | + | chr2_4:29384597-29384616 | Msa0324120:intron | 20.0% |
| !! | TAAACAAGTTTGAATTTAGA+AGG | + | chr2_4:29384821-29384840 | Msa0324120:intron | 20.0% |
| !!! | TCATTTTCAGATGAAAATAT+AGG | + | chr2_4:29384968-29384987 | Msa0324120:intron | 20.0% |
| !!! | AAAAGAGCAATTTTGTATAA+AGG | - | chr2_4:29385116-29385135 | None:intergenic | 20.0% |
| !!! | TCAAATTATCTGTTGATTTT+GGG | - | chr2_4:29385284-29385303 | None:intergenic | 20.0% |
| ! | TAATCTTTACTTTCTCTTTC+GGG | - | chr2_4:29379264-29379283 | None:intergenic | 25.0% |
| !! | ATGTTTCTATAAGAGAAACA+AGG | - | chr2_4:29379738-29379757 | None:intergenic | 25.0% |
| ! | ATAGAAACATAATACATGCA+AGG | + | chr2_4:29379748-29379767 | Msa0324120:intron | 25.0% |
| ! | TAGAAACATAATACATGCAA+GGG | + | chr2_4:29379749-29379768 | Msa0324120:intron | 25.0% |
| !!! | TTGCTTTAAACTTGTTATGA+AGG | + | chr2_4:29380542-29380561 | Msa0324120:intron | 25.0% |
| ! | TATATACCATTGGAGATAAT+AGG | - | chr2_4:29380730-29380749 | None:intergenic | 25.0% |
| ! | CATATATGCATATATACCAT+TGG | - | chr2_4:29380740-29380759 | None:intergenic | 25.0% |
| !! | TTTTATTAACCGTAGTAGTT+TGG | - | chr2_4:29381109-29381128 | None:intergenic | 25.0% |
| !!! | TAATTGATGACTTTTAACAG+AGG | + | chr2_4:29381301-29381320 | Msa0324120:intron | 25.0% |
| !! | TATATGCCTATAACTTGTAT+GGG | - | chr2_4:29381920-29381939 | None:intergenic | 25.0% |
| !! | TTATATGCCTATAACTTGTA+TGG | - | chr2_4:29381921-29381940 | None:intergenic | 25.0% |
| !! | AAAAAGTGATCCTATCTTTT+TGG | + | chr2_4:29382169-29382188 | Msa0324120:intron | 25.0% |
| !! | AAAAGTGATCCTATCTTTTT+GGG | + | chr2_4:29382170-29382189 | Msa0324120:intron | 25.0% |
| !!! | GTATTTTCAATAGTTTGTAG+GGG | - | chr2_4:29382330-29382349 | None:intergenic | 25.0% |
| !!! | GGTATTTTCAATAGTTTGTA+GGG | - | chr2_4:29382331-29382350 | None:intergenic | 25.0% |
| !!! | TGGTATTTTCAATAGTTTGT+AGG | - | chr2_4:29382332-29382351 | None:intergenic | 25.0% |
| !!! | GTGGGTATGATTTTTTAAAA+GGG | - | chr2_4:29382362-29382381 | None:intergenic | 25.0% |
| !!! | AGTGGGTATGATTTTTTAAA+AGG | - | chr2_4:29382363-29382382 | None:intergenic | 25.0% |
| !!! | CTTTGTTGTTGTTTGAATAA+GGG | - | chr2_4:29382508-29382527 | None:intergenic | 25.0% |
| !!! | ACTTTGTTGTTGTTTGAATA+AGG | - | chr2_4:29382509-29382528 | None:intergenic | 25.0% |
| ! | TATTGATGTTATGAAGAGAT+TGG | - | chr2_4:29382555-29382574 | None:intergenic | 25.0% |
| ! | TTCATGTAAAATACTAGTGA+TGG | + | chr2_4:29382654-29382673 | Msa0324120:intron | 25.0% |
| ! | AGAGAGATAAAGAAAAATTG+TGG | + | chr2_4:29382813-29382832 | Msa0324120:intron | 25.0% |
| ! | AGTGATAAAGAAAAACTACA+CGG | + | chr2_4:29382961-29382980 | Msa0324120:intron | 25.0% |
| !!! | TGGTATTTTCAATGATTTGT+TGG | + | chr2_4:29383060-29383079 | Msa0324120:intron | 25.0% |
| !!! | GGTATTTTCAATGATTTGTT+GGG | + | chr2_4:29383061-29383080 | Msa0324120:intron | 25.0% |
| !!! | GTATTTTCAATGATTTGTTG+GGG | + | chr2_4:29383062-29383081 | Msa0324120:intron | 25.0% |
| !!! | CTTTTGTATGGATATTTTTG+TGG | + | chr2_4:29383216-29383235 | Msa0324120:intron | 25.0% |
| ! | ATGTCTTCATAAACTTAGTT+GGG | - | chr2_4:29383304-29383323 | None:intergenic | 25.0% |
| !!! | TTGTTTTTAGCATCACTTTT+AGG | + | chr2_4:29383391-29383410 | Msa0324120:intron | 25.0% |
| !!! | TGTTTTTAGCATCACTTTTA+GGG | + | chr2_4:29383392-29383411 | Msa0324120:intron | 25.0% |
| ! | CTTAAAATAAAGCCTTTGAT+AGG | - | chr2_4:29383503-29383522 | None:intergenic | 25.0% |
| !!! | TGAAATTTGTTACACAAACT+AGG | - | chr2_4:29383578-29383597 | None:intergenic | 25.0% |
| ! | AATCATGTCTGATAACAATA+AGG | + | chr2_4:29383734-29383753 | Msa0324120:intron | 25.0% |
| ! | CCTATTAATTTAATTAAGCC+GGG | - | chr2_4:29383984-29384003 | None:intergenic | 25.0% |
| ! | GCCTATTAATTTAATTAAGC+CGG | - | chr2_4:29383985-29384004 | None:intergenic | 25.0% |
| !!! | ATACATTTTGAAATAAGGGT+TGG | + | chr2_4:29384143-29384162 | Msa0324120:intron | 25.0% |
| !!! | TACATTTTGAAATAAGGGTT+GGG | + | chr2_4:29384144-29384163 | Msa0324120:intron | 25.0% |
| ! | AATCTTGACCCAAAAATAAA+AGG | + | chr2_4:29384406-29384425 | Msa0324120:intron | 25.0% |
| ! | AACAATCATTCTAAACATGA+TGG | - | chr2_4:29385038-29385057 | None:intergenic | 25.0% |
| ! | TGATTTGATTAGTAGATGTT+AGG | + | chr2_4:29385135-29385154 | Msa0324120:intron | 25.0% |
| !!! | CAAATTATCTGTTGATTTTG+GGG | - | chr2_4:29385283-29385302 | None:intergenic | 25.0% |
| !!! | GTCAAATTATCTGTTGATTT+TGG | - | chr2_4:29385285-29385304 | None:intergenic | 25.0% |
| !!! | AAACCTTGTAGATTTTTTCA+TGG | - | chr2_4:29385625-29385644 | None:intergenic | 25.0% |
| !!! | AATCTACAAGGTTTTATACA+AGG | + | chr2_4:29385631-29385650 | Msa0324120:CDS | 25.0% |
| ! | CTTCACAAATTTCATCATTA+TGG | - | chr2_4:29385683-29385702 | None:intergenic | 25.0% |
| ! | TGATGAAATTTGTGAAGATT+TGG | + | chr2_4:29385686-29385705 | Msa0324120:CDS | 25.0% |
| ! | GATGAAATTTGTGAAGATTT+GGG | + | chr2_4:29385687-29385706 | Msa0324120:CDS | 25.0% |
| !!! | GGAAGATTGAGTTTTTTATT+TGG | + | chr2_4:29385782-29385801 | Msa0324120:exon | 25.0% |
| GGGTTGTAGTAGAAAAAAAT+TGG | - | chr2_4:29379024-29379043 | None:intergenic | 30.0% | |
| AAACTTGATTTCAACCACTT+TGG | - | chr2_4:29379367-29379386 | None:intergenic | 30.0% | |
| ! | TGGTTGAAATCAAGTTTGTT+CGG | + | chr2_4:29379370-29379389 | Msa0324120:CDS | 30.0% |
| !!! | GACAAAGAAGGTTTTGATTT+TGG | + | chr2_4:29379393-29379412 | Msa0324120:CDS | 30.0% |
| AAAGTGAATAAAGACCTGAA+TGG | - | chr2_4:29379499-29379518 | None:intergenic | 30.0% | |
| TTCTATAAGAGAAACAAGGA+AGG | - | chr2_4:29379734-29379753 | None:intergenic | 30.0% | |
| ATACATGCAAGGGTAAAAAT+TGG | + | chr2_4:29379759-29379778 | Msa0324120:intron | 30.0% | |
| CATAGTGAAAATTGTTACCT+TGG | - | chr2_4:29380197-29380216 | None:intergenic | 30.0% | |
| ATGTGTTTAATGTGTACACA+AGG | + | chr2_4:29380236-29380255 | Msa0324120:intron | 30.0% | |
| TAATTGGGCAGATGTTAATT+TGG | - | chr2_4:29380485-29380504 | None:intergenic | 30.0% | |
| ATTTGAAAGACAGTTCAAAC+AGG | + | chr2_4:29380972-29380991 | Msa0324120:intron | 30.0% | |
| AGTTGTAAAATGAGCTCAAA+AGG | + | chr2_4:29381039-29381058 | Msa0324120:intron | 30.0% | |
| AAACTTCCATTAGAGAAGTA+TGG | + | chr2_4:29381363-29381382 | Msa0324120:CDS | 30.0% | |
| ! | AACTTCCATTAGAGAAGTAT+GGG | + | chr2_4:29381364-29381383 | Msa0324120:CDS | 30.0% |
| ATGCAAAATCTTCCTGAAAA+GGG | - | chr2_4:29381404-29381423 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAATGAGGCTGATA+AGG | + | chr2_4:29381452-29381471 | Msa0324120:CDS | 30.0% |
| !! | TTTTTCAATGAGGCTGATAA+GGG | + | chr2_4:29381453-29381472 | Msa0324120:CDS | 30.0% |
| TATTCCAACAAGCTAGAAAA+AGG | - | chr2_4:29381624-29381643 | None:intergenic | 30.0% | |
| ATTTGTGTTTACCTGTACAA+TGG | - | chr2_4:29381663-29381682 | None:intergenic | 30.0% | |
| ! | GATTGAGTATATTGATTGGA+GGG | - | chr2_4:29381712-29381731 | None:intergenic | 30.0% |
| ! | AGATTGAGTATATTGATTGG+AGG | - | chr2_4:29381713-29381732 | None:intergenic | 30.0% |
| ! | CACTAATGATCATTTTACGA+TGG | + | chr2_4:29381893-29381912 | Msa0324120:intron | 30.0% |
| ATTAGATAGAGCTGTCAAAA+TGG | + | chr2_4:29382079-29382098 | Msa0324120:intron | 30.0% | |
| TTAGATAGAGCTGTCAAAAT+GGG | + | chr2_4:29382080-29382099 | Msa0324120:intron | 30.0% | |
| ! | TTAGTTTGGATTTAGGAGTA+AGG | - | chr2_4:29382442-29382461 | None:intergenic | 30.0% |
| ! | GCAGAAATTAGTTTGGATTT+AGG | - | chr2_4:29382449-29382468 | None:intergenic | 30.0% |
| !!! | GGGATTGCTTTTTCTTAATA+TGG | - | chr2_4:29382593-29382612 | None:intergenic | 30.0% |
| AGTGTTCAAAAAGCTTCAAT+TGG | - | chr2_4:29382871-29382890 | None:intergenic | 30.0% | |
| ! | GTGTAGTTTTTCTTTATCAC+TGG | - | chr2_4:29382962-29382981 | None:intergenic | 30.0% |
| ! | TGGGGTAAAAGTATAATTGT+CGG | + | chr2_4:29383080-29383099 | Msa0324120:intron | 30.0% |
| !! | TCATACTCTCTACTTTTGTA+TGG | + | chr2_4:29383204-29383223 | Msa0324120:intron | 30.0% |
| CATGTCTTCATAAACTTAGT+TGG | - | chr2_4:29383305-29383324 | None:intergenic | 30.0% | |
| !!! | GTTTTTAGCATCACTTTTAG+GGG | + | chr2_4:29383393-29383412 | Msa0324120:intron | 30.0% |
| TAAAGCCTTTGATAGGTATA+AGG | - | chr2_4:29383496-29383515 | None:intergenic | 30.0% | |
| AGTACATTGCACAAATTGAA+AGG | - | chr2_4:29383628-29383647 | None:intergenic | 30.0% | |
| TAATAACCATACTTGACCTT+AGG | + | chr2_4:29383772-29383791 | Msa0324120:intron | 30.0% | |
| !! | TTGATTTGTGTGAACTGTTA+AGG | - | chr2_4:29383813-29383832 | None:intergenic | 30.0% |
| CCCGGCTTAATTAAATTAAT+AGG | + | chr2_4:29383981-29384000 | Msa0324120:intron | 30.0% | |
| ACTCATTTATTAAACGAGCT+AGG | + | chr2_4:29384026-29384045 | Msa0324120:intron | 30.0% | |
| TTTAAAAAGTGATTAGGGGT+GGG | - | chr2_4:29384110-29384129 | None:intergenic | 30.0% | |
| !! | TTTTAAAAAGTGATTAGGGG+TGG | - | chr2_4:29384111-29384130 | None:intergenic | 30.0% |
| ! | TTGATAGCCCATAAATAAAG+TGG | + | chr2_4:29384216-29384235 | Msa0324120:intron | 30.0% |
| TGATAGCCCATAAATAAAGT+GGG | + | chr2_4:29384217-29384236 | Msa0324120:intron | 30.0% | |
| !! | TCACATATAAATGGGTTGAA+GGG | - | chr2_4:29384249-29384268 | None:intergenic | 30.0% |
| !! | ATCACATATAAATGGGTTGA+AGG | - | chr2_4:29384250-29384269 | None:intergenic | 30.0% |
| GTGGAACATCACATATAAAT+GGG | - | chr2_4:29384257-29384276 | None:intergenic | 30.0% | |
| ATTTATATGTGATGTTCCAC+CGG | + | chr2_4:29384257-29384276 | Msa0324120:intron | 30.0% | |
| CTAAAACTAGAGTTGTCAAA+TGG | - | chr2_4:29384309-29384328 | None:intergenic | 30.0% | |
| TGTGTCAATTGTTAATTGAG+TGG | - | chr2_4:29385064-29385083 | None:intergenic | 30.0% | |
| AGCTATGATTTATTTGTCAC+AGG | + | chr2_4:29385427-29385446 | Msa0324120:intron | 30.0% | |
| GCTATGATTTATTTGTCACA+GGG | + | chr2_4:29385428-29385447 | Msa0324120:intron | 30.0% | |
| CTATGATTTATTTGTCACAG+GGG | + | chr2_4:29385429-29385448 | Msa0324120:intron | 30.0% | |
| AAGCCATGAAAAAATCTACA+AGG | + | chr2_4:29385619-29385638 | Msa0324120:CDS | 30.0% | |
| AAATTTGTGAAGATTTGGGT+TGG | + | chr2_4:29385691-29385710 | Msa0324120:CDS | 30.0% | |
| TAAAGACAACCCACCAATTA+TGG | + | chr2_4:29379053-29379072 | Msa0324120:CDS | 35.0% | |
| TTCTTGACACCATAATTGGT+GGG | - | chr2_4:29379065-29379084 | None:intergenic | 35.0% | |
| ATTCTTGACACCATAATTGG+TGG | - | chr2_4:29379066-29379085 | None:intergenic | 35.0% | |
| CCAATTCTTGACACCATAAT+TGG | - | chr2_4:29379069-29379088 | None:intergenic | 35.0% | |
| ! | CCAATTATGGTGTCAAGAAT+TGG | + | chr2_4:29379066-29379085 | Msa0324120:CDS | 35.0% |
| GTGTCAAGAATTGGTATCAT+AGG | + | chr2_4:29379075-29379094 | Msa0324120:CDS | 35.0% | |
| !! | GTGTGATAGTTGTTTTGCTA+CGG | - | chr2_4:29379121-29379140 | None:intergenic | 35.0% |
| CAGTGGCTTCAAAAACAATA+GGG | - | chr2_4:29379149-29379168 | None:intergenic | 35.0% | |
| TCAGTGGCTTCAAAAACAAT+AGG | - | chr2_4:29379150-29379169 | None:intergenic | 35.0% | |
| !! | TTTGAAGCCACTGATTCAAT+TGG | + | chr2_4:29379156-29379175 | Msa0324120:CDS | 35.0% |
| TTTGGAGACATTGTTCCTAT+AGG | + | chr2_4:29379184-29379203 | Msa0324120:CDS | 35.0% | |
| TTGAAGCTTAGTACACCTAT+AGG | - | chr2_4:29379202-29379221 | None:intergenic | 35.0% | |
| CTAAGCTTCAATCACAAACA+TGG | + | chr2_4:29379211-29379230 | Msa0324120:CDS | 35.0% | |
| TGTTAAGTTCAACACCAAAG+TGG | + | chr2_4:29379350-29379369 | Msa0324120:CDS | 35.0% | |
| ! | GGTTGAAATCAAGTTTGTTC+GGG | + | chr2_4:29379371-29379390 | Msa0324120:CDS | 35.0% |
| GGGGAATATTATGCAAGAAA+TGG | + | chr2_4:29379819-29379838 | Msa0324120:intron | 35.0% | |
| TTAAAGGCTATGCTGTTGTT+AGG | - | chr2_4:29379860-29379879 | None:intergenic | 35.0% | |
| !! | ATCAGCTATTGATTTAGCCA+TGG | + | chr2_4:29380155-29380174 | Msa0324120:CDS | 35.0% |
| AACCATGCACAATGATCATA+AGG | + | chr2_4:29380576-29380595 | Msa0324120:CDS | 35.0% | |
| TGATCATAAGGAGTTTGCAT+TGG | + | chr2_4:29380588-29380607 | Msa0324120:CDS | 35.0% | |
| ATTGGACACTTCCACATTAT+AGG | + | chr2_4:29380606-29380625 | Msa0324120:CDS | 35.0% | |
| ACTTCCACATTATAGGATGT+GGG | + | chr2_4:29380613-29380632 | Msa0324120:CDS | 35.0% | |
| GTTGCGTAGAACATGAAAAA+TGG | - | chr2_4:29380644-29380663 | None:intergenic | 35.0% | |
| !! | CTTTTAAGTAAACCCTGGTT+TGG | - | chr2_4:29380695-29380714 | None:intergenic | 35.0% |
| !! | AAAGGCTTTTAAGTAAACCC+TGG | - | chr2_4:29380700-29380719 | None:intergenic | 35.0% |
| ! | GAGATAATAGGAGGCATAAA+AGG | - | chr2_4:29380718-29380737 | None:intergenic | 35.0% |
| ATACCATTGGAGATAATAGG+AGG | - | chr2_4:29380727-29380746 | None:intergenic | 35.0% | |
| TTCAACCCATACTTCTCTAA+TGG | - | chr2_4:29381372-29381391 | None:intergenic | 35.0% | |
| GATGCAAAATCTTCCTGAAA+AGG | - | chr2_4:29381405-29381424 | None:intergenic | 35.0% | |
| !! | TCTCTGGTGTTATAGCTATT+TGG | - | chr2_4:29381431-29381450 | None:intergenic | 35.0% |
| !!! | ACCAGAGAGTTTTTTCAATG+AGG | + | chr2_4:29381443-29381462 | Msa0324120:CDS | 35.0% |
| TTCTTGCAACTGGTTATGAT+GGG | + | chr2_4:29381568-29381587 | Msa0324120:CDS | 35.0% | |
| ! | GTTTTGCTGAGTATGTTGAA+TGG | - | chr2_4:29381991-29382010 | None:intergenic | 35.0% |
| CTGGACTGTACTAAAATAGT+GGG | - | chr2_4:29382132-29382151 | None:intergenic | 35.0% | |
| TCTGGACTGTACTAAAATAG+TGG | - | chr2_4:29382133-29382152 | None:intergenic | 35.0% | |
| !!! | TTTCATGCTTTTTTACGGTC+TGG | - | chr2_4:29382151-29382170 | None:intergenic | 35.0% |
| !! | ACCAGGCCTATATTTTTCAA+GGG | + | chr2_4:29382200-29382219 | Msa0324120:intron | 35.0% |
| !!! | GCCTATATTTTTCAAGGGTT+GGG | + | chr2_4:29382205-29382224 | Msa0324120:intron | 35.0% |
| ACCCAACCCTTGAAAAATAT+AGG | - | chr2_4:29382209-29382228 | None:intergenic | 35.0% | |
| !!! | ATATTTTTCAAGGGTTGGGT+CGG | + | chr2_4:29382209-29382228 | Msa0324120:intron | 35.0% |
| AGTATAATTGTTGGGGTATG+GGG | - | chr2_4:29382303-29382322 | None:intergenic | 35.0% | |
| GAGTATAATTGTTGGGGTAT+GGG | - | chr2_4:29382304-29382323 | None:intergenic | 35.0% | |
| ! | TTTCAATAGTTTGTAGGGGT+AGG | - | chr2_4:29382326-29382345 | None:intergenic | 35.0% |
| ! | GAAAAACGTTTCTGGAAAAG+TGG | - | chr2_4:29382398-29382417 | None:intergenic | 35.0% |
| TACGCTAGCAGAAATTAGTT+TGG | - | chr2_4:29382456-29382475 | None:intergenic | 35.0% | |
| TGTTATGAAGAGATTGGATG+AGG | - | chr2_4:29382549-29382568 | None:intergenic | 35.0% | |
| AATCTCAAGGATAAGAGACT+AGG | - | chr2_4:29382743-29382762 | None:intergenic | 35.0% | |
| TCCAGTGTGTAAGTAAATTC+TGG | + | chr2_4:29383007-29383026 | Msa0324120:intron | 35.0% | |
| TCCAGAATTTACTTACACAC+TGG | - | chr2_4:29383011-29383030 | None:intergenic | 35.0% | |
| ! | GGGGTAAAAGTATAATTGTC+GGG | + | chr2_4:29383081-29383100 | Msa0324120:intron | 35.0% |
| ! | GGGTAAAAGTATAATTGTCG+GGG | + | chr2_4:29383082-29383101 | Msa0324120:intron | 35.0% |
| !!! | GCATGCATGGATGTTTTTTA+TGG | + | chr2_4:29383135-29383154 | Msa0324120:intron | 35.0% |
| AGGCCTAGTTGAAAAAACTA+AGG | + | chr2_4:29383458-29383477 | Msa0324120:intron | 35.0% | |
| !!! | AGGCCTTAGTTTTTTCAACT+AGG | - | chr2_4:29383464-29383483 | None:intergenic | 35.0% |
| !!! | CAAAGGCTTTATTTTAAGCC+TGG | + | chr2_4:29383505-29383524 | Msa0324120:intron | 35.0% |
| ! | AGGCTTTTAGACAGACTAAT+AGG | - | chr2_4:29383558-29383577 | None:intergenic | 35.0% |
| !!! | CTTTTTTATAAGCCTAAGCC+CGG | + | chr2_4:29383963-29383982 | Msa0324120:intron | 35.0% |
| AATTTAATTAAGCCGGGCTT+AGG | - | chr2_4:29383978-29383997 | None:intergenic | 35.0% | |
| !! | ACATATAAATGGGTTGAAGG+GGG | - | chr2_4:29384247-29384266 | None:intergenic | 35.0% |
| !! | CACATATAAATGGGTTGAAG+GGG | - | chr2_4:29384248-29384267 | None:intergenic | 35.0% |
| GGTGGAACATCACATATAAA+TGG | - | chr2_4:29384258-29384277 | None:intergenic | 35.0% | |
| TTTATATGTGATGTTCCACC+GGG | + | chr2_4:29384258-29384277 | Msa0324120:intron | 35.0% | |
| ACTAGAGTTGTCAAATGGAT+CGG | - | chr2_4:29384304-29384323 | None:intergenic | 35.0% | |
| TAGAAGGAACTAGAACTAAG+TGG | + | chr2_4:29384837-29384856 | Msa0324120:intron | 35.0% | |
| TGACTATTCACTCTCAACTA+TGG | - | chr2_4:29385407-29385426 | None:intergenic | 35.0% | |
| !! | TCATCCATTGATTCCAAACA+TGG | + | chr2_4:29385458-29385477 | Msa0324120:CDS | 35.0% |
| AATGCTCTCACAAACCATTA+AGG | + | chr2_4:29385590-29385609 | Msa0324120:CDS | 35.0% | |
| GAGGAAGAAGAACTTGATTA+AGG | + | chr2_4:29385722-29385741 | Msa0324120:CDS | 35.0% | |
| GAAGAAGAACTTGATTAAGG+AGG | + | chr2_4:29385725-29385744 | Msa0324120:CDS | 35.0% | |
| TTATAATCAGCAGCAGTGTA+AGG | - | chr2_4:29385759-29385778 | None:intergenic | 35.0% | |
| GGTTGTCTTTAGTCAGCATA+GGG | - | chr2_4:29379044-29379063 | None:intergenic | 40.0% | |
| AGAATTGGTATCATAGGTGC+TGG | + | chr2_4:29379081-29379100 | Msa0324120:CDS | 40.0% | |
| AACACCACCAATTGAATCAG+TGG | - | chr2_4:29379166-29379185 | None:intergenic | 40.0% | |
| !! | CTGATTCAATTGGTGGTGTT+TGG | + | chr2_4:29379166-29379185 | Msa0324120:CDS | 40.0% |
| ACGAGTTTAGTGATTTCCCT+TGG | + | chr2_4:29379238-29379257 | Msa0324120:CDS | 40.0% | |
| ! | AAGTTTGTTCGGGACAAAGA+AGG | + | chr2_4:29379381-29379400 | Msa0324120:CDS | 40.0% |
| TAATGAATCAGACGCCATTC+AGG | + | chr2_4:29379482-29379501 | Msa0324120:CDS | 40.0% | |
| ! | GTACTACTTCGAGTTTGTAG+TGG | + | chr2_4:29379960-29379979 | Msa0324120:CDS | 40.0% |
| ! | GTGGTTTGCACTGGAAAATA+TGG | + | chr2_4:29379979-29379998 | Msa0324120:CDS | 40.0% |
| CATGGAAATGTTGGCATCAA+TGG | - | chr2_4:29380012-29380031 | None:intergenic | 40.0% | |
| CCAACATTTCCATGCAACAA+GGG | + | chr2_4:29380018-29380037 | Msa0324120:CDS | 40.0% | |
| AGCTACTAGTGACCTTGTTA+AGG | + | chr2_4:29380101-29380120 | Msa0324120:CDS | 40.0% | |
| GCTACTAGTGACCTTGTTAA+GGG | + | chr2_4:29380102-29380121 | Msa0324120:CDS | 40.0% | |
| TGACCTTGTTAAGGGAAAGA+AGG | + | chr2_4:29380110-29380129 | Msa0324120:CDS | 40.0% | |
| CAACCTTCTTTCCCTTAACA+AGG | - | chr2_4:29380116-29380135 | None:intergenic | 40.0% | |
| TGTTAAGGGAAAGAAGGTTG+TGG | + | chr2_4:29380116-29380135 | Msa0324120:CDS | 40.0% | |
| !! | ACTTGTTATGAAGGACCTGA+AGG | + | chr2_4:29380551-29380570 | Msa0324120:intron | 40.0% |
| ! | CTTGTTATGAAGGACCTGAA+GGG | + | chr2_4:29380552-29380571 | Msa0324120:intron | 40.0% |
| CTCCTTATGATCATTGTGCA+TGG | - | chr2_4:29380581-29380600 | None:intergenic | 40.0% | |
| CACTTCCACATTATAGGATG+TGG | + | chr2_4:29380612-29380631 | Msa0324120:CDS | 40.0% | |
| CTTCCACATTATAGGATGTG+GGG | + | chr2_4:29380614-29380633 | Msa0324120:CDS | 40.0% | |
| ATGCCTCCTATTATCTCCAA+TGG | + | chr2_4:29380721-29380740 | Msa0324120:CDS | 40.0% | |
| TGATACTTTGAGCCGTCTAA+TGG | + | chr2_4:29381073-29381092 | Msa0324120:intron | 40.0% | |
| GATACTTTGAGCCGTCTAAT+GGG | + | chr2_4:29381074-29381093 | Msa0324120:intron | 40.0% | |
| ATCCGTGATCCAAACTACTA+CGG | + | chr2_4:29381097-29381116 | Msa0324120:intron | 40.0% | |
| AACCGTAGTAGTTTGGATCA+CGG | - | chr2_4:29381102-29381121 | None:intergenic | 40.0% | |
| TCATAGAGTCCTACTTACTG+TGG | + | chr2_4:29381340-29381359 | Msa0324120:CDS | 40.0% | |
| TGGAAGTTTCCACAGTAAGT+AGG | - | chr2_4:29381352-29381371 | None:intergenic | 40.0% | |
| GCCTCATTGAAAAAACTCTC+TGG | - | chr2_4:29381447-29381466 | None:intergenic | 40.0% | |
| !! | TCTTCAAGAGAGCATCAAAG+TGG | + | chr2_4:29381484-29381503 | Msa0324120:CDS | 40.0% |
| !!! | TCAAAGTGGTGGTTTTGGAA+TGG | + | chr2_4:29381498-29381517 | Msa0324120:CDS | 40.0% |
| GATGTTGTTCTTCTTGCAAC+TGG | + | chr2_4:29381558-29381577 | Msa0324120:CDS | 40.0% | |
| CTTCTTGCAACTGGTTATGA+TGG | + | chr2_4:29381567-29381586 | Msa0324120:CDS | 40.0% | |
| ! | AGAAAAAGGCTCTGGCAAAA+TGG | - | chr2_4:29381610-29381629 | None:intergenic | 40.0% |
| AACAAGCTAGAAAAAGGCTC+TGG | - | chr2_4:29381618-29381637 | None:intergenic | 40.0% | |
| !!! | AGAGCCTTTTTCTAGCTTGT+TGG | + | chr2_4:29381617-29381636 | Msa0324120:CDS | 40.0% |
| GATGGACCCATACAAGTTAT+AGG | + | chr2_4:29381911-29381930 | Msa0324120:intron | 40.0% | |
| TGCTGAGTATGTTGAATGGA+GGG | - | chr2_4:29381987-29382006 | None:intergenic | 40.0% | |
| TTGCTGAGTATGTTGAATGG+AGG | - | chr2_4:29381988-29382007 | None:intergenic | 40.0% | |
| !! | GTACTAAAATAGTGGGTCGA+GGG | - | chr2_4:29382125-29382144 | None:intergenic | 40.0% |
| !! | TGTACTAAAATAGTGGGTCG+AGG | - | chr2_4:29382126-29382145 | None:intergenic | 40.0% |
| !!! | TGATCCTATCTTTTTGGGTC+AGG | + | chr2_4:29382175-29382194 | Msa0324120:intron | 40.0% |
| CTTGAAAAATATAGGCCTGG+TGG | - | chr2_4:29382201-29382220 | None:intergenic | 40.0% | |
| ! | CACCAGGCCTATATTTTTCA+AGG | + | chr2_4:29382199-29382218 | Msa0324120:intron | 40.0% |
| ACCCTTGAAAAATATAGGCC+TGG | - | chr2_4:29382204-29382223 | None:intergenic | 40.0% | |
| !!! | GGCCTATATTTTTCAAGGGT+TGG | + | chr2_4:29382204-29382223 | Msa0324120:intron | 40.0% |
| !!! | TATTTTTCAAGGGTTGGGTC+GGG | + | chr2_4:29382210-29382229 | Msa0324120:intron | 40.0% |
| GGAGTATAATTGTTGGGGTA+TGG | - | chr2_4:29382305-29382324 | None:intergenic | 40.0% | |
| ! | GGGTAGGAGTATAATTGTTG+GGG | - | chr2_4:29382310-29382329 | None:intergenic | 40.0% |
| ! | GGGGTAGGAGTATAATTGTT+GGG | - | chr2_4:29382311-29382330 | None:intergenic | 40.0% |
| ! | AGGGGTAGGAGTATAATTGT+TGG | - | chr2_4:29382312-29382331 | None:intergenic | 40.0% |
| ! | TTTCTGGAAAAGTGGAGTGA+GGG | - | chr2_4:29382390-29382409 | None:intergenic | 40.0% |
| GAGGAAGAGAAAAACGTTTC+TGG | - | chr2_4:29382406-29382425 | None:intergenic | 40.0% | |
| GTAAGGATAGCAAGAAGATG+AGG | - | chr2_4:29382425-29382444 | None:intergenic | 40.0% | |
| TAAGGACGATCATCAATAGC+TGG | + | chr2_4:29382787-29382806 | Msa0324120:intron | 40.0% | |
| AGTATAATTGTCGGGGTATG+AGG | + | chr2_4:29383089-29383108 | Msa0324120:intron | 40.0% | |
| !! | TTTAGCATCACTTTTAGGGG+TGG | + | chr2_4:29383396-29383415 | Msa0324120:intron | 40.0% |
| !! | TTAGCATCACTTTTAGGGGT+GGG | + | chr2_4:29383397-29383416 | Msa0324120:intron | 40.0% |
| TAGCCTATTTATGCAAAGCC+CGG | - | chr2_4:29383439-29383458 | None:intergenic | 40.0% | |
| AAAAACTAAGGCCTAAGCCT+TGG | + | chr2_4:29383470-29383489 | Msa0324120:intron | 40.0% | |
| CTTTGATAGGTATAAGGCCA+AGG | - | chr2_4:29383490-29383509 | None:intergenic | 40.0% | |
| !! | CTTGGCCTTATACCTATCAA+AGG | + | chr2_4:29383488-29383507 | Msa0324120:intron | 40.0% |
| GATATGCCTAAGGTCAAGTA+TGG | - | chr2_4:29383781-29383800 | None:intergenic | 40.0% | |
| ! | GTTTGCTACTGATATGCCTA+AGG | - | chr2_4:29383791-29383810 | None:intergenic | 40.0% |
| AAAAGCCTATCAAGCCTATC+AGG | - | chr2_4:29383948-29383967 | None:intergenic | 40.0% | |
| !!! | TTTTGAAATAAGGGTTGGGC+CGG | + | chr2_4:29384148-29384167 | Msa0324120:intron | 40.0% |
| TTGTGTAGCCCACTACTAAT+TGG | + | chr2_4:29384180-29384199 | Msa0324120:intron | 40.0% | |
| TGTGTAGCCCACTACTAATT+GGG | + | chr2_4:29384181-29384200 | Msa0324120:intron | 40.0% | |
| ! | TTGGGGTTTGATAGCTCAAT+TGG | - | chr2_4:29385266-29385285 | None:intergenic | 40.0% |
| ! | AAGGCCATGTTTGGAATCAA+TGG | - | chr2_4:29385465-29385484 | None:intergenic | 40.0% |
| ATTCCAAACATGGCCTTTGT+GGG | + | chr2_4:29385468-29385487 | Msa0324120:CDS | 40.0% | |
| ACTCTCAACATAACCCACAA+AGG | - | chr2_4:29385484-29385503 | None:intergenic | 40.0% | |
| !!! | GAGAGCATTTTCTCAGCATT+TGG | - | chr2_4:29385579-29385598 | None:intergenic | 40.0% |
| CTCACAAACCATTAAGGACA+TGG | + | chr2_4:29385596-29385615 | Msa0324120:CDS | 40.0% | |
| ! | AGGAACTGCATCACAACTTT+TGG | + | chr2_4:29385651-29385670 | Msa0324120:CDS | 40.0% |
| !! | AAGATTTGGGTTGGCATACT+TGG | + | chr2_4:29385700-29385719 | Msa0324120:CDS | 40.0% |
| ! | CACTGCTGCTGATTATAAGA+AGG | + | chr2_4:29385761-29385780 | Msa0324120:CDS | 40.0% |
| GGGTTGTCTTTAGTCAGCAT+AGG | - | chr2_4:29379045-29379064 | None:intergenic | 45.0% | |
| !! | GAAGCCACTGATTCAATTGG+TGG | + | chr2_4:29379159-29379178 | Msa0324120:CDS | 45.0% |
| TACTTTCTCTTTCGGGCCAA+GGG | - | chr2_4:29379257-29379276 | None:intergenic | 45.0% | |
| TTACTTTCTCTTTCGGGCCA+AGG | - | chr2_4:29379258-29379277 | None:intergenic | 45.0% | |
| ! | TCCTTCTCACGCTGAGATTT+TGG | + | chr2_4:29379284-29379303 | Msa0324120:CDS | 45.0% |
| TCCAAAATCTCAGCGTGAGA+AGG | - | chr2_4:29379288-29379307 | None:intergenic | 45.0% | |
| !! | TTTGATTTTGGACGCCTACC+TGG | + | chr2_4:29379405-29379424 | Msa0324120:CDS | 45.0% |
| AAAGGATTTCCATGGTCACC+AGG | - | chr2_4:29379426-29379445 | None:intergenic | 45.0% | |
| GTTCAGGCAAAGGATTTCCA+TGG | - | chr2_4:29379434-29379453 | None:intergenic | 45.0% | |
| AAATCCTTTGCCTGAACGTC+CGG | + | chr2_4:29379437-29379456 | Msa0324120:CDS | 45.0% | |
| TGAACAGAAAGCTCCCATAC+CGG | - | chr2_4:29379459-29379478 | None:intergenic | 45.0% | |
| ! | GGCATTGTTTGTCCCTTTTC+AGG | + | chr2_4:29379705-29379724 | Msa0324120:intron | 45.0% |
| CAAGGAAGGACACCTGAAAA+GGG | - | chr2_4:29379720-29379739 | None:intergenic | 45.0% | |
| ACAAGGAAGGACACCTGAAA+AGG | - | chr2_4:29379721-29379740 | None:intergenic | 45.0% | |
| ! | GAGTTTGTAGTGGTTTGCAC+TGG | + | chr2_4:29379970-29379989 | Msa0324120:CDS | 45.0% |
| GCCAACATTTCCATGCAACA+AGG | + | chr2_4:29380017-29380036 | Msa0324120:CDS | 45.0% | |
| CCCTTGTTGCATGGAAATGT+TGG | - | chr2_4:29380021-29380040 | None:intergenic | 45.0% | |
| GGAAAGAAGGTTGTGGTTGT+GGG | + | chr2_4:29380123-29380142 | Msa0324120:CDS | 45.0% | |
| TTTAGCCATGGAGTGTGTAC+AGG | + | chr2_4:29380167-29380186 | Msa0324120:CDS | 45.0% | |
| ACTCCCCACATCCTATAATG+TGG | - | chr2_4:29380620-29380639 | None:intergenic | 45.0% | |
| CTTCACCATACACCAAACCA+GGG | + | chr2_4:29380680-29380699 | Msa0324120:CDS | 45.0% | |
| !! | GTAAACCCTGGTTTGGTGTA+TGG | - | chr2_4:29380688-29380707 | None:intergenic | 45.0% |
| GATGAACCTAGTTCGATCGT+AGG | + | chr2_4:29380940-29380959 | Msa0324120:intron | 45.0% | |
| TTGACTCCTACGATCGAACT+AGG | - | chr2_4:29380949-29380968 | None:intergenic | 45.0% | |
| ! | GAAACCAGAACACCCTTTTC+AGG | + | chr2_4:29381389-29381408 | Msa0324120:CDS | 45.0% |
| !! | TCTTCCTGAAAAGGGTGTTC+TGG | - | chr2_4:29381396-29381415 | None:intergenic | 45.0% |
| !! | TCAAGAGAGCATCAAAGTGG+TGG | + | chr2_4:29381487-29381506 | Msa0324120:CDS | 45.0% |
| ! | GAGCATCAAAGTGGTGGTTT+TGG | + | chr2_4:29381493-29381512 | Msa0324120:CDS | 45.0% |
| !!! | AAGTGGTGGTTTTGGAATGG+AGG | + | chr2_4:29381501-29381520 | Msa0324120:CDS | 45.0% |
| !! | AGCTTGTTGGAATACCCTAC+TGG | + | chr2_4:29381630-29381649 | Msa0324120:CDS | 45.0% |
| ! | GCTTGTTGGAATACCCTACT+GGG | + | chr2_4:29381631-29381650 | Msa0324120:CDS | 45.0% |
| ACAATGGCATGATCCCAGTA+GGG | - | chr2_4:29381647-29381666 | None:intergenic | 45.0% | |
| TACAATGGCATGATCCCAGT+AGG | - | chr2_4:29381648-29381667 | None:intergenic | 45.0% | |
| GCTGAGTATGTTGAATGGAG+GGG | - | chr2_4:29381986-29382005 | None:intergenic | 45.0% | |
| ATAGAGCTGTCAAAATGGGC+CGG | + | chr2_4:29382084-29382103 | Msa0324120:intron | 45.0% | |
| ! | TTCTGGAAAAGTGGAGTGAG+GGG | - | chr2_4:29382389-29382408 | None:intergenic | 45.0% |
| ! | GTTTCTGGAAAAGTGGAGTG+AGG | - | chr2_4:29382391-29382410 | None:intergenic | 45.0% |
| !! | CAGTCCTTGATTTGTTGCCA+CGG | + | chr2_4:29382677-29382696 | Msa0324120:intron | 45.0% |
| !! | AGTCCTTGATTTGTTGCCAC+GGG | + | chr2_4:29382678-29382697 | Msa0324120:intron | 45.0% |
| !! | TTCAATTGATTGGTCTCCCG+TGG | - | chr2_4:29382697-29382716 | None:intergenic | 45.0% |
| TATTTATGCAAAGCCCGGCT+CGG | - | chr2_4:29383434-29383453 | None:intergenic | 45.0% | |
| GGGCTTTGCATAAATAGGCT+AGG | + | chr2_4:29383438-29383457 | Msa0324120:intron | 45.0% | |
| TAGGTATAAGGCCAAGGCTT+AGG | - | chr2_4:29383484-29383503 | None:intergenic | 45.0% | |
| !!! | GCTTTATTTTAAGCCTGGCC+TGG | + | chr2_4:29383510-29383529 | Msa0324120:intron | 45.0% |
| !! | GCCTTTTTAAAAGCCTGGCT+TGG | + | chr2_4:29383532-29383551 | Msa0324120:intron | 45.0% |
| !! | GCCAAGCCAGGCTTTTAAAA+AGG | - | chr2_4:29383536-29383555 | None:intergenic | 45.0% |
| AGCCAAGCCCAATTAGTAGT+GGG | - | chr2_4:29384191-29384210 | None:intergenic | 45.0% | |
| AAGCCAAGCCCAATTAGTAG+TGG | - | chr2_4:29384192-29384211 | None:intergenic | 45.0% | |
| ! | GGTCGGCCCACTTTATTTAT+GGG | - | chr2_4:29384226-29384245 | None:intergenic | 45.0% |
| !! | ATAAATGGGTTGAAGGGGGT+CGG | - | chr2_4:29384243-29384262 | None:intergenic | 45.0% |
| GATTCCAAACATGGCCTTTG+TGG | + | chr2_4:29385467-29385486 | Msa0324120:CDS | 45.0% | |
| TAACCCACAAAGGCCATGTT+TGG | - | chr2_4:29385474-29385493 | None:intergenic | 45.0% | |
| AAGCCACATGGAACGTATCT+CGG | - | chr2_4:29385526-29385545 | None:intergenic | 45.0% | |
| TAATAGACCAGCAAGCCACA+TGG | - | chr2_4:29385538-29385557 | None:intergenic | 45.0% | |
| CATGGCTTCCATGTCCTTAA+TGG | - | chr2_4:29385607-29385626 | None:intergenic | 45.0% | |
| !! | ATTTGGGTTGGCATACTTGG+AGG | + | chr2_4:29385703-29385722 | Msa0324120:CDS | 45.0% |
| !!! | ATTTTTTTTAACAATATTAT+AGG | - | chr2_4:29379552-29379571 | None:intergenic | 5.0% |
| !! | AAAAAAATAAAATCTTATAT+AGG | + | chr2_4:29379798-29379817 | Msa0324120:intron | 5.0% |
| !! | AAAAAATAAAATCTTATATA+GGG | + | chr2_4:29379799-29379818 | Msa0324120:intron | 5.0% |
| !! | ATATATATATATAATAAGTT+TGG | + | chr2_4:29383892-29383911 | Msa0324120:intron | 5.0% |
| !! | TAAATGATAAAATAATATTT+AGG | + | chr2_4:29385325-29385344 | Msa0324120:intron | 5.0% |
| !! | ATCATAGGTGCTGGAGTGAG+TGG | + | chr2_4:29379090-29379109 | Msa0324120:CDS | 50.0% |
| GATTTCCATGGTCACCAGGT+AGG | - | chr2_4:29379422-29379441 | None:intergenic | 50.0% | |
| TTTGCCTGAACGTCCGGTAT+GGG | + | chr2_4:29379443-29379462 | Msa0324120:CDS | 50.0% | |
| ! | AAGGGACCTGAGGTGTTCAA+GGG | + | chr2_4:29380036-29380055 | Msa0324120:CDS | 50.0% |
| ! | ACCTGAGGTGTTCAAGGGTA+AGG | + | chr2_4:29380041-29380060 | Msa0324120:CDS | 50.0% |
| ACCTTACCCTTGAACACCTC+AGG | - | chr2_4:29380045-29380064 | None:intergenic | 50.0% | |
| GGGAAAGAAGGTTGTGGTTG+TGG | + | chr2_4:29380122-29380141 | Msa0324120:CDS | 50.0% | |
| GTTTGCCTGTACACACTCCA+TGG | - | chr2_4:29380175-29380194 | None:intergenic | 50.0% | |
| GAGTGTGTACAGGCAAACCA+AGG | + | chr2_4:29380177-29380196 | Msa0324120:CDS | 50.0% | |
| ATTGTGCATGGTTGCCCTTC+AGG | - | chr2_4:29380569-29380588 | None:intergenic | 50.0% | |
| !! | CCTGGTTTGGTGTATGGTGA+AGG | - | chr2_4:29380682-29380701 | None:intergenic | 50.0% |
| CCTTCACCATACACCAAACC+AGG | + | chr2_4:29380679-29380698 | Msa0324120:CDS | 50.0% | |
| GGATCACGGATCCCATTAGA+CGG | - | chr2_4:29381088-29381107 | None:intergenic | 50.0% | |
| CTGGGATCATGCCATTGTAC+AGG | + | chr2_4:29381649-29381668 | Msa0324120:CDS | 50.0% | |
| GTATGTTGAATGGAGGGGCA+TGG | - | chr2_4:29381981-29382000 | None:intergenic | 50.0% | |
| !! | AAAATAGTGGGTCGAGGGTC+CGG | - | chr2_4:29382120-29382139 | None:intergenic | 50.0% |
| GTGGCCTGACCCAAAAAGAT+AGG | - | chr2_4:29382182-29382201 | None:intergenic | 50.0% | |
| TCTGGAAAAGTGGAGTGAGG+GGG | - | chr2_4:29382388-29382407 | None:intergenic | 50.0% | |
| TCTCCCGTGGCAACAAATCA+AGG | - | chr2_4:29382684-29382703 | None:intergenic | 50.0% | |
| !! | TTTTAGGGGTGGGAATGAGC+CGG | + | chr2_4:29383407-29383426 | Msa0324120:intron | 50.0% |
| GAGCCGGGCTTTGCATAAAT+AGG | + | chr2_4:29383433-29383452 | Msa0324120:intron | 50.0% | |
| !! | GCTTTTAAAAAGGCCAGGCC+AGG | - | chr2_4:29383526-29383545 | None:intergenic | 50.0% |
| !! | GCCTGGCCTTTTTAAAAGCC+TGG | + | chr2_4:29383527-29383546 | Msa0324120:intron | 50.0% |
| !! | GCCAGGCTTTTAAAAAGGCC+AGG | - | chr2_4:29383531-29383550 | None:intergenic | 50.0% |
| ACAGACTAATAGGCCAAGCC+AGG | - | chr2_4:29383548-29383567 | None:intergenic | 50.0% | |
| ! | CATATACGGGCTGACCTGAT+AGG | + | chr2_4:29383931-29383950 | Msa0324120:intron | 50.0% |
| GCTGACCTGATAGGCTTGAT+AGG | + | chr2_4:29383940-29383959 | Msa0324120:intron | 50.0% | |
| ! | CTTTTAGTAGGCCGAGCCAT+AGG | + | chr2_4:29384059-29384078 | Msa0324120:intron | 50.0% |
| ATTAGGGGTGGGAATATGCC+AGG | - | chr2_4:29384099-29384118 | None:intergenic | 50.0% | |
| AGCCCACTACTAATTGGGCT+TGG | + | chr2_4:29384186-29384205 | Msa0324120:intron | 50.0% | |
| ! | GGGTCGGCCCACTTTATTTA+TGG | - | chr2_4:29384227-29384246 | None:intergenic | 50.0% |
| CATCCGAGATACGTTCCATG+TGG | + | chr2_4:29385520-29385539 | Msa0324120:CDS | 50.0% | |
| ! | ATACGTTCCATGTGGCTTGC+TGG | + | chr2_4:29385528-29385547 | Msa0324120:CDS | 50.0% |
| CATACCGGACGTTCAGGCAA+AGG | - | chr2_4:29379444-29379463 | None:intergenic | 55.0% | |
| CTTTGCCTGAACGTCCGGTA+TGG | + | chr2_4:29379442-29379461 | Msa0324120:CDS | 55.0% | |
| TCCATGCAACAAGGGACCTG+AGG | + | chr2_4:29380026-29380045 | Msa0324120:CDS | 55.0% | |
| ACCTCAGGTCCCTTGTTGCA+TGG | - | chr2_4:29380030-29380049 | None:intergenic | 55.0% | |
| ! | CAAGGGACCTGAGGTGTTCA+AGG | + | chr2_4:29380035-29380054 | Msa0324120:CDS | 55.0% |
| ! | TGAATGGAGGGGCATGGAAG+TGG | - | chr2_4:29381975-29381994 | None:intergenic | 55.0% |
| TCAAAATGGGCCGGACCGAT+CGG | + | chr2_4:29382093-29382112 | Msa0324120:intron | 55.0% | |
| !!! | TCTTTTTGGGTCAGGCCACC+AGG | + | chr2_4:29382183-29382202 | Msa0324120:intron | 55.0% |
| TTTAGGGGTGGGAATGAGCC+GGG | + | chr2_4:29383408-29383427 | Msa0324120:intron | 55.0% | |
| TTAAACGAGCTAGGCCGAGC+CGG | + | chr2_4:29384035-29384054 | Msa0324120:intron | 55.0% | |
| !! | TAGTGGGCTACACAACGCGA+CGG | - | chr2_4:29384175-29384194 | None:intergenic | 55.0% |
| ATGTGATGTTCCACCGGGTC+AGG | + | chr2_4:29384263-29384282 | Msa0324120:intron | 55.0% | |
| TGTGATGTTCCACCGGGTCA+GGG | + | chr2_4:29384264-29384283 | Msa0324120:intron | 55.0% | |
| AGCTCCCATACCGGACGTTC+AGG | - | chr2_4:29379450-29379469 | None:intergenic | 60.0% | |
| CAAAATGGGCCGGACCGATC+GGG | + | chr2_4:29382094-29382113 | Msa0324120:intron | 60.0% | |
| AGTGGAGTGAGGGGGTGAGT+GGG | - | chr2_4:29382380-29382399 | None:intergenic | 60.0% | |
| AAGTGGAGTGAGGGGGTGAG+TGG | - | chr2_4:29382381-29382400 | None:intergenic | 60.0% | |
| TAAACGAGCTAGGCCGAGCC+GGG | + | chr2_4:29384036-29384055 | Msa0324120:intron | 60.0% | |
| GGCCTACTAAAAGCCCGGCT+CGG | - | chr2_4:29384052-29384071 | None:intergenic | 60.0% | |
| GGCTCGGCCTACTAAAAGCC+CGG | - | chr2_4:29384057-29384076 | None:intergenic | 60.0% | |
| !! | AGTGGGCTACACAACGCGAC+GGG | - | chr2_4:29384174-29384193 | None:intergenic | 60.0% |
| GGACGCCTACCTGGTGACCA+TGG | + | chr2_4:29379414-29379433 | Msa0324120:CDS | 65.0% | |
| TTGGGTCGGGCCAGCCAGTT+AGG | + | chr2_4:29382223-29382242 | Msa0324120:intron | 65.0% | |
| GGGCCAGCCAGTTAGGCTTG+CGG | + | chr2_4:29382230-29382249 | Msa0324120:intron | 65.0% | |
| GGCCAGCCAGTTAGGCTTGC+GGG | + | chr2_4:29382231-29382250 | Msa0324120:intron | 65.0% | |
| AGCCCGCAAGCCTAACTGGC+TGG | - | chr2_4:29382236-29382255 | None:intergenic | 65.0% | |
| GGCAAGCCCGCAAGCCTAAC+TGG | - | chr2_4:29382240-29382259 | None:intergenic | 65.0% | |
| ! | GGCCGAGCCGGGCTTTTAGT+AGG | + | chr2_4:29384047-29384066 | Msa0324120:intron | 65.0% |
| ATATGCCAGGCCGCCCGTCA+GGG | - | chr2_4:29384086-29384105 | None:intergenic | 65.0% | |
| AATATGCCAGGCCGCCCGTC+AGG | - | chr2_4:29384087-29384106 | None:intergenic | 65.0% | |
| GATGTTCCACCGGGTCAGGG+CGG | + | chr2_4:29384267-29384286 | Msa0324120:intron | 65.0% | |
| ATGTTCCACCGGGTCAGGGC+GGG | + | chr2_4:29384268-29384287 | Msa0324120:intron | 65.0% | |
| !! | ATGCAAAGCCCGGCTCGGCC+CGG | - | chr2_4:29383429-29383448 | None:intergenic | 70.0% |
| GCCGAGCCATAGGCCCCTGA+CGG | + | chr2_4:29384069-29384088 | Msa0324120:intron | 70.0% | |
| CCCGTCAGGGGCCTATGGCT+CGG | - | chr2_4:29384073-29384092 | None:intergenic | 70.0% | |
| CCGAGCCATAGGCCCCTGAC+GGG | + | chr2_4:29384070-29384089 | Msa0324120:intron | 70.0% | |
| AGCCATAGGCCCCTGACGGG+CGG | + | chr2_4:29384073-29384092 | Msa0324120:intron | 70.0% | |
| TATGCCAGGCCGCCCGTCAG+GGG | - | chr2_4:29384085-29384104 | None:intergenic | 70.0% | |
| GGCTACACAACGCGACGGGC+CGG | - | chr2_4:29384170-29384189 | None:intergenic | 70.0% | |
| CGACCTAACCCGCCCTGACC+CGG | - | chr2_4:29384279-29384298 | None:intergenic | 70.0% | |
| !! | CGGGTCAGGGCGGGTTAGGT+CGG | + | chr2_4:29384277-29384296 | Msa0324120:intron | 70.0% |
| !! | GGGTCAGGGCGGGTTAGGTC+GGG | + | chr2_4:29384278-29384297 | Msa0324120:intron | 70.0% |
| ATGGGCCGGACCGATCGGGC+CGG | + | chr2_4:29382098-29382117 | Msa0324120:intron | 75.0% | |
| AGGGTCCGGCCCGATCGGTC+CGG | - | chr2_4:29382106-29382125 | None:intergenic | 75.0% | |
| GGTCGAGGGTCCGGCCCGAT+CGG | - | chr2_4:29382111-29382130 | None:intergenic | 75.0% | |
| GGGAATGAGCCGGGCCGAGC+CGG | + | chr2_4:29383417-29383436 | Msa0324120:intron | 75.0% | |
| GGAATGAGCCGGGCCGAGCC+GGG | + | chr2_4:29383418-29383437 | Msa0324120:intron | 75.0% | |
| CCTAACCCGCCCTGACCCGG+TGG | - | chr2_4:29384276-29384295 | None:intergenic | 75.0% | |
| ! | CCACCGGGTCAGGGCGGGTT+AGG | + | chr2_4:29384273-29384292 | Msa0324120:intron | 75.0% |
| ! | GGCCGCCCGTCAGGGGCCTA+TGG | - | chr2_4:29384078-29384097 | None:intergenic | 80.0% |
| !! | TAGGCCCCTGACGGGCGGCC+TGG | + | chr2_4:29384078-29384097 | Msa0324120:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 29378995 | 29385827 | 29378995 | ID=Msa0324120;Name=Msa0324120 |
| chr2_4 | mRNA | 29378995 | 29385827 | 29378995 | ID=Msa0324120-mRNA-1;Parent=Msa0324120;Name=Msa0324120-mRNA-1;_AED=0.05;_eAED=0.05;_QI=50|1|1|1|1|1|5|36|523 |
| chr2_4 | exon | 29378995 | 29379503 | 29378995 | ID=Msa0324120-mRNA-1:exon:9946;Parent=Msa0324120-mRNA-1 |
| chr2_4 | exon | 29379958 | 29380198 | 29379958 | ID=Msa0324120-mRNA-1:exon:9947;Parent=Msa0324120-mRNA-1 |
| chr2_4 | exon | 29380564 | 29380742 | 29380564 | ID=Msa0324120-mRNA-1:exon:9948;Parent=Msa0324120-mRNA-1 |
| chr2_4 | exon | 29381321 | 29381670 | 29381321 | ID=Msa0324120-mRNA-1:exon:9949;Parent=Msa0324120-mRNA-1 |
| chr2_4 | exon | 29385449 | 29385827 | 29385449 | ID=Msa0324120-mRNA-1:exon:9950;Parent=Msa0324120-mRNA-1 |
| chr2_4 | five_prime_UTR | 29378995 | 29379044 | 29378995 | ID=Msa0324120-mRNA-1:five_prime_utr;Parent=Msa0324120-mRNA-1 |
| chr2_4 | CDS | 29379045 | 29379503 | 29379045 | ID=Msa0324120-mRNA-1:cds;Parent=Msa0324120-mRNA-1 |
| chr2_4 | CDS | 29379958 | 29380198 | 29379958 | ID=Msa0324120-mRNA-1:cds;Parent=Msa0324120-mRNA-1 |
| chr2_4 | CDS | 29380564 | 29380742 | 29380564 | ID=Msa0324120-mRNA-1:cds;Parent=Msa0324120-mRNA-1 |
| chr2_4 | CDS | 29381321 | 29381670 | 29381321 | ID=Msa0324120-mRNA-1:cds;Parent=Msa0324120-mRNA-1 |
| chr2_4 | CDS | 29385449 | 29385791 | 29385449 | ID=Msa0324120-mRNA-1:cds;Parent=Msa0324120-mRNA-1 |
| chr2_4 | three_prime_UTR | 29385792 | 29385827 | 29385792 | ID=Msa0324120-mRNA-1:three_prime_utr;Parent=Msa0324120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
