Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203740 | XP_013463606.1 | 96.558 | 523 | 18 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1059 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203740 | sp|Q9LMA1|FMO1_ARATH | 62.157 | 510 | 191 | 2 | 12 | 520 | 11 | 519 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203740 | A0A072V7M8 | 96.558 | 523 | 18 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1059 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0203740 | Msa0246930 | 0.919515 | 4.089665e-87 | -8.615850e-47 |
| Msa0203740 | Msa0285270 | 0.814320 | 1.635663e-51 | -8.615850e-47 |
| Msa0203740 | Msa0324120 | 0.853781 | 1.904865e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203740 | MtrunA17_Chr2g0301471 | 96.558 | 523 | 18 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1059 |
| Msa0203740 | MtrunA17_Chr2g0301661 | 93.881 | 523 | 32 | 0 | 1 | 523 | 1 | 523 | 0.0 | 982 |
| Msa0203740 | MtrunA17_Chr4g0070101 | 66.667 | 525 | 169 | 4 | 1 | 523 | 3 | 523 | 0.0 | 702 |
| Msa0203740 | MtrunA17_Chr4g0070111 | 73.404 | 282 | 75 | 0 | 242 | 523 | 1 | 282 | 1.14e-163 | 465 |
| Msa0203740 | MtrunA17_Chr2g0305211 | 39.845 | 517 | 301 | 7 | 10 | 519 | 1 | 514 | 9.78e-141 | 416 |
| Msa0203740 | MtrunA17_Chr2g0305231 | 39.845 | 517 | 301 | 7 | 10 | 519 | 1 | 514 | 9.78e-141 | 416 |
| Msa0203740 | MtrunA17_Chr2g0286701 | 82.479 | 234 | 41 | 0 | 1 | 234 | 1 | 234 | 1.34e-140 | 408 |
| Msa0203740 | MtrunA17_Chr2g0304721 | 41.860 | 516 | 289 | 8 | 10 | 519 | 1 | 511 | 4.01e-140 | 414 |
| Msa0203740 | MtrunA17_Chr2g0304651 | 39.231 | 520 | 300 | 8 | 10 | 520 | 1 | 513 | 8.03e-135 | 400 |
| Msa0203740 | MtrunA17_Chr4g0070121 | 62.857 | 210 | 75 | 2 | 27 | 234 | 29 | 237 | 4.19e-84 | 260 |
| Msa0203740 | MtrunA17_Chr2g0286671 | 91.346 | 104 | 9 | 0 | 420 | 523 | 1 | 104 | 2.01e-64 | 204 |
| Msa0203740 | MtrunA17_Chr2g0286681 | 71.681 | 113 | 31 | 1 | 284 | 395 | 5 | 117 | 3.39e-53 | 176 |
| Msa0203740 | MtrunA17_Chr2g0286691 | 70.588 | 68 | 20 | 0 | 233 | 300 | 10 | 77 | 7.55e-29 | 109 |
| Msa0203740 | MtrunA17_Chr1g0169111 | 25.916 | 382 | 219 | 16 | 6 | 381 | 94 | 417 | 7.88e-18 | 86.3 |
| Msa0203740 | MtrunA17_Chr7g0262591 | 26.486 | 370 | 205 | 14 | 16 | 381 | 26 | 332 | 5.71e-17 | 83.2 |
| Msa0203740 | MtrunA17_Chr1g0182991 | 24.865 | 370 | 215 | 15 | 16 | 381 | 27 | 337 | 9.76e-17 | 82.4 |
| Msa0203740 | MtrunA17_Chr3g0091441 | 29.752 | 242 | 121 | 8 | 14 | 229 | 13 | 231 | 2.56e-16 | 81.3 |
| Msa0203740 | MtrunA17_Chr1g0148801 | 24.865 | 370 | 212 | 15 | 16 | 381 | 18 | 325 | 7.57e-16 | 79.7 |
| Msa0203740 | MtrunA17_Chr2g0301651 | 90.909 | 33 | 3 | 0 | 420 | 452 | 1 | 33 | 7.00e-14 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0203740 | AT1G19250.1 | 62.157 | 510 | 191 | 2 | 12 | 520 | 11 | 519 | 0.0 | 700 |
| Msa0203740 | AT5G45180.1 | 56.495 | 485 | 171 | 4 | 12 | 496 | 11 | 455 | 0.0 | 578 |
| Msa0203740 | AT2G33230.1 | 27.394 | 376 | 202 | 18 | 16 | 381 | 34 | 348 | 6.52e-17 | 83.6 |
| Msa0203740 | AT1G04610.1 | 26.415 | 371 | 212 | 16 | 16 | 381 | 39 | 353 | 5.19e-16 | 80.9 |
| Msa0203740 | AT4G28720.1 | 26.546 | 388 | 211 | 17 | 5 | 381 | 16 | 340 | 5.31e-16 | 80.9 |
| Msa0203740 | AT4G13260.2 | 24.815 | 270 | 163 | 9 | 16 | 283 | 30 | 261 | 3.70e-13 | 70.9 |
| Msa0203740 | AT1G21430.1 | 24.397 | 373 | 208 | 14 | 16 | 381 | 11 | 316 | 3.94e-13 | 71.6 |
| Msa0203740 | AT5G07800.1 | 26.515 | 264 | 138 | 8 | 13 | 246 | 15 | 252 | 4.17e-13 | 72.0 |
| Msa0203740 | AT1G12200.2 | 27.132 | 258 | 133 | 8 | 1 | 230 | 1 | 231 | 4.69e-13 | 71.2 |
| Msa0203740 | AT4G13260.1 | 24.138 | 377 | 224 | 13 | 9 | 381 | 23 | 341 | 4.80e-13 | 71.6 |
| Msa0203740 | AT1G62620.2 | 24.314 | 255 | 135 | 9 | 8 | 233 | 7 | 232 | 6.09e-13 | 70.9 |
| Msa0203740 | AT1G12200.1 | 27.132 | 258 | 133 | 8 | 1 | 230 | 1 | 231 | 6.31e-13 | 71.2 |
| Msa0203740 | AT5G43890.1 | 23.861 | 373 | 218 | 13 | 16 | 381 | 27 | 340 | 7.13e-13 | 70.9 |
| Msa0203740 | AT1G62620.1 | 24.603 | 252 | 132 | 9 | 8 | 230 | 7 | 229 | 9.04e-13 | 70.9 |
| Msa0203740 | AT1G04180.1 | 24.865 | 370 | 215 | 14 | 16 | 381 | 27 | 337 | 1.02e-12 | 70.5 |
| Msa0203740 | AT1G63370.2 | 24.206 | 252 | 133 | 9 | 8 | 230 | 7 | 229 | 1.07e-12 | 69.7 |
| Msa0203740 | AT4G32540.1 | 25.000 | 380 | 213 | 18 | 9 | 381 | 16 | 330 | 1.19e-12 | 70.1 |
| Msa0203740 | AT1G63370.1 | 24.206 | 252 | 133 | 9 | 8 | 230 | 7 | 229 | 1.43e-12 | 70.1 |
| Msa0203740 | AT1G62560.2 | 24.000 | 250 | 131 | 9 | 9 | 230 | 8 | 226 | 3.28e-12 | 68.9 |
| Msa0203740 | AT4G32540.2 | 26.562 | 256 | 144 | 11 | 9 | 262 | 16 | 229 | 3.78e-12 | 68.6 |
| Msa0203740 | AT1G62560.1 | 24.000 | 250 | 131 | 9 | 9 | 230 | 8 | 226 | 5.08e-12 | 68.6 |
| Msa0203740 | AT5G11320.1 | 25.000 | 368 | 212 | 15 | 16 | 381 | 19 | 324 | 5.83e-12 | 68.2 |
| Msa0203740 | AT5G11320.2 | 25.000 | 368 | 212 | 15 | 16 | 381 | 19 | 324 | 6.77e-12 | 67.4 |
| Msa0203740 | AT1G65860.1 | 26.295 | 251 | 123 | 10 | 9 | 230 | 8 | 225 | 1.07e-11 | 67.4 |
| Msa0203740 | AT5G61290.1 | 27.984 | 243 | 127 | 9 | 14 | 231 | 16 | 235 | 1.74e-11 | 67.0 |
Find 129 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCTCACGCTGAGATTT+TGG | 0.091965 | 2_1:+28167021 | Msa0203740:CDS |
| CATTGCTTCCATGTCCTTAA+TGG | 0.136279 | 2_1:-28172495 | None:intergenic |
| TAATCTTTACTTTCTCTTTC+AGG | 0.185583 | 2_1:-28166998 | None:intergenic |
| CTTCACAAATTTCATCATTA+TGG | 0.191455 | 2_1:-28172571 | None:intergenic |
| CCAATTCTTGACACCATAAT+TGG | 0.204297 | 2_1:-28166803 | None:intergenic |
| GAGGAAGAAGAACTTGATTA+AGG | 0.284399 | 2_1:+28172613 | Msa0203740:CDS |
| TGATGAAATTTGTGAAGATT+TGG | 0.290590 | 2_1:+28172577 | Msa0203740:CDS |
| GAGCATCAAAGTGGTGGTTT+TGG | 0.290725 | 2_1:+28169233 | Msa0203740:CDS |
| TAAAGACAACCCACCAATTA+TGG | 0.292860 | 2_1:+28166790 | Msa0203740:CDS |
| ATTGGACACTTCCACATTAT+AGG | 0.303294 | 2_1:+28168344 | Msa0203740:CDS |
| AAACTTCCATTAGAGAAGTA+TGG | 0.311043 | 2_1:+28169103 | Msa0203740:CDS |
| CTGATTCAATTGGTGGTGTT+TGG | 0.316589 | 2_1:+28166903 | Msa0203740:CDS |
| TCTTCCTGAAAAGGGTGTTC+TGG | 0.317237 | 2_1:-28169133 | None:intergenic |
| ATTGTGCATGGTTGCCCTTC+AGG | 0.320608 | 2_1:-28168304 | None:intergenic |
| TTCAACCCATACTTCTCTAA+TGG | 0.327648 | 2_1:-28169109 | None:intergenic |
| AGGAACTGCATCACAACTTT+TGG | 0.340506 | 2_1:+28172542 | Msa0203740:CDS |
| AGCTCCCATACCGGACGTTC+AGG | 0.347698 | 2_1:-28167184 | None:intergenic |
| TATTCCAACAAGCTAGAAAA+AGG | 0.349311 | 2_1:-28169361 | None:intergenic |
| GAGATAATAGGAGGCATAAA+AGG | 0.351598 | 2_1:-28168453 | None:intergenic |
| GGGAAAGAAGGTTGTGGTTG+TGG | 0.353865 | 2_1:+28167860 | Msa0203740:CDS |
| ATACGTTCCATGTGGCTTGC+TGG | 0.361433 | 2_1:+28172419 | Msa0203740:CDS |
| AATGCTCTCACAAACCATTA+AGG | 0.368860 | 2_1:+28172481 | Msa0203740:CDS |
| GATGAAATTTGTGAAGATTT+GGG | 0.369050 | 2_1:+28172578 | Msa0203740:CDS |
| AAGATTTGGGTTGGCATACT+TGG | 0.370246 | 2_1:+28172591 | Msa0203740:CDS |
| TAATGAATCAGACGCCATTC+AGG | 0.375341 | 2_1:+28167219 | Msa0203740:CDS |
| AGCTACTAGTGACCTTGTTA+AGG | 0.378740 | 2_1:+28167839 | Msa0203740:CDS |
| TTTGGAGACATTGTTCCTAT+AGG | 0.379655 | 2_1:+28166921 | Msa0203740:CDS |
| GGTTGAAATCAAGTTTGTTC+GGG | 0.381102 | 2_1:+28167108 | Msa0203740:CDS |
| TATATACCATTGGAGATAAT+AGG | 0.382661 | 2_1:-28168465 | None:intergenic |
| GATGCAAAATCTTCCTGAAA+AGG | 0.389419 | 2_1:-28169142 | None:intergenic |
| CCAATTATGGTGTCAAGAAT+TGG | 0.392328 | 2_1:+28166803 | Msa0203740:CDS |
| TAACCCACAAAGGCCATGTT+TGG | 0.399285 | 2_1:-28172362 | None:intergenic |
| GATGTTGTTCTTCTTGCAAC+TGG | 0.404238 | 2_1:+28169298 | Msa0203740:CDS |
| TGGTTGAAATCAAGTTTGTT+CGG | 0.406466 | 2_1:+28167107 | Msa0203740:CDS |
| GATTCCAAACATGGCCTTTG+TGG | 0.406988 | 2_1:+28172358 | Msa0203740:CDS |
| GGAAAGAAGGTTGTGGTTGT+GGG | 0.417388 | 2_1:+28167861 | Msa0203740:CDS |
| GTGGTTTGCACTGGAAAATA+TGG | 0.430049 | 2_1:+28167717 | Msa0203740:CDS |
| CTTCTTGCAACTGGTTATGA+TGG | 0.433437 | 2_1:+28169307 | Msa0203740:CDS |
| AAACTTGATTTCAACCACTT+TGG | 0.433707 | 2_1:-28167101 | None:intergenic |
| CTTGAACAAATCAAAATAAA+CGG | 0.441646 | 2_1:-28167062 | None:intergenic |
| GTAAACCCTGGTTTGGTGTA+TGG | 0.444256 | 2_1:-28168423 | None:intergenic |
| CAAGGGACCTGAGGTGTTCA+AGG | 0.445930 | 2_1:+28167773 | Msa0203740:CDS |
| CATGGAAATGTTGGCATCAA+TGG | 0.446961 | 2_1:-28167747 | None:intergenic |
| GTGTCAAGAATTGGTATCAT+AGG | 0.455100 | 2_1:+28166812 | Msa0203740:CDS |
| AAATCCTTTGCCTGAACGTC+CGG | 0.456957 | 2_1:+28167174 | Msa0203740:CDS |
| TTATAGTCAGCAGCAGTGTA+AGG | 0.462752 | 2_1:-28172647 | None:intergenic |
| AAGGCCATGTTTGGAATCAA+TGG | 0.465986 | 2_1:-28172353 | None:intergenic |
| CTTTGCCTGAACGTCCGGTA+TGG | 0.469197 | 2_1:+28167179 | Msa0203740:CDS |
| TACTTTCTCTTTCAGGCCAA+GGG | 0.470849 | 2_1:-28166991 | None:intergenic |
| GCTACTAGTGACCTTGTTAA+GGG | 0.472706 | 2_1:+28167840 | Msa0203740:CDS |
| CACTTCCACATTATAGGATG+TGG | 0.475745 | 2_1:+28168350 | Msa0203740:CDS |
| ATTCCAAACATGGCCTTTGT+GGG | 0.477703 | 2_1:+28172359 | Msa0203740:CDS |
| GGTTGTCTTTAGTCAGCATA+GGG | 0.478049 | 2_1:-28166778 | None:intergenic |
| ACCTGAGGTGTTCAAGGGTA+AGG | 0.478572 | 2_1:+28167779 | Msa0203740:CDS |
| TGACCTTGTTAAGGGAAAGA+AGG | 0.483185 | 2_1:+28167848 | Msa0203740:CDS |
| ATGAATTTAGTGATTTCCCT+TGG | 0.484807 | 2_1:+28166975 | Msa0203740:CDS |
| ATGCAAAATCTTCCTGAAAA+GGG | 0.485125 | 2_1:-28169141 | None:intergenic |
| AACCATGCACAATGATCATA+AGG | 0.486955 | 2_1:+28168314 | Msa0203740:CDS |
| TTTAGCCATGGAGTGTGTAC+AGG | 0.489929 | 2_1:+28167905 | Msa0203740:CDS |
| AGAATTGGTATCATAGGTGC+TGG | 0.492588 | 2_1:+28166818 | Msa0203740:CDS |
| TTTGAAGCCACTGATTCAAT+TGG | 0.492788 | 2_1:+28166893 | Msa0203740:CDS |
| TTTGCCTGAACGTCCGGTAT+GGG | 0.493505 | 2_1:+28167180 | Msa0203740:CDS |
| GGGTTGTCTTTAGTCAGCAT+AGG | 0.496524 | 2_1:-28166779 | None:intergenic |
| CCTTCACCATACACCAAACC+AGG | 0.500334 | 2_1:+28168417 | Msa0203740:CDS |
| CCAAAATCTCAGCGTGAGAA+GGG | 0.502428 | 2_1:-28167021 | None:intergenic |
| TCCAAAATCTCAGCGTGAGA+AGG | 0.504059 | 2_1:-28167022 | None:intergenic |
| TTCTTGCAACTGGTTATGAT+GGG | 0.506089 | 2_1:+28169308 | Msa0203740:CDS |
| AACTTCCATTAGAGAAGTAT+GGG | 0.506741 | 2_1:+28169104 | Msa0203740:CDS |
| GAGTTTGTAGTGGTTTGCAC+TGG | 0.512700 | 2_1:+28167708 | Msa0203740:CDS |
| ATGCCTCCTATTATCTCCAA+TGG | 0.513080 | 2_1:+28168459 | Msa0203740:CDS |
| AGCTTGTTGGAATACCCTAC+TGG | 0.513346 | 2_1:+28169370 | Msa0203740:CDS |
| AAGTTTGTTCGGGACAAAGA+AGG | 0.514045 | 2_1:+28167118 | Msa0203740:CDS |
| ACCTCAGGTCCCTTGTTGCA+TGG | 0.517460 | 2_1:-28167765 | None:intergenic |
| TTGAAGCTTAGTACACCTAT+AGG | 0.522294 | 2_1:-28166936 | None:intergenic |
| ACCTTACCCTTGAACACCTC+AGG | 0.522344 | 2_1:-28167780 | None:intergenic |
| TTACTTTCTCTTTCAGGCCA+AGG | 0.523575 | 2_1:-28166992 | None:intergenic |
| CTGGTATCATGCCATTGTAC+AGG | 0.525824 | 2_1:+28169389 | Msa0203740:CDS |
| TGATCATAAGGAGTTTGCAT+TGG | 0.525875 | 2_1:+28168326 | Msa0203740:CDS |
| ATTCTTGACACCATAATTGG+TGG | 0.526017 | 2_1:-28166800 | None:intergenic |
| CAACCTTCTTTCCCTTAACA+AGG | 0.529813 | 2_1:-28167851 | None:intergenic |
| GAAGCCACTGATTCAATTGG+TGG | 0.530458 | 2_1:+28166896 | Msa0203740:CDS |
| CCCTTGTTGCATGGAAATGT+TGG | 0.530793 | 2_1:-28167756 | None:intergenic |
| AAGCCACATGGAACGTATCT+CGG | 0.538091 | 2_1:-28172414 | None:intergenic |
| ATTTGGGTTGGCATACTTGG+AGG | 0.538869 | 2_1:+28172594 | Msa0203740:CDS |
| AAATTTGTGAAGATTTGGGT+TGG | 0.542822 | 2_1:+28172582 | Msa0203740:CDS |
| AAAGGATTTCCATGGTCACC+AGG | 0.547280 | 2_1:-28167160 | None:intergenic |
| CACTGCTGCTGACTATAAGA+AGG | 0.548587 | 2_1:+28172652 | Msa0203740:CDS |
| GTTTGCCTGTACACACTCCA+TGG | 0.550549 | 2_1:-28167910 | None:intergenic |
| ACTTGTTATGAAGGACCTGA+AGG | 0.551898 | 2_1:+28168289 | Msa0203740:intron |
| TTCTTGACACCATAATTGGT+GGG | 0.552760 | 2_1:-28166799 | None:intergenic |
| ATCAGCTATTGATTTAGCCA+TGG | 0.562783 | 2_1:+28167893 | Msa0203740:CDS |
| TCATCCATTGATTCCAAACA+TGG | 0.563445 | 2_1:+28172349 | Msa0203740:CDS |
| CTAAGCTTCAATCACAAACA+TGG | 0.565933 | 2_1:+28166948 | Msa0203740:CDS |
| ATTTGTGTTTACCTGTACAA+TGG | 0.566886 | 2_1:-28169400 | None:intergenic |
| TCCATGCAACAAGGGACCTG+AGG | 0.570241 | 2_1:+28167764 | Msa0203740:CDS |
| TGTTAAGGGAAAGAAGGTTG+TGG | 0.573393 | 2_1:+28167854 | Msa0203740:CDS |
| CATACCGGACGTTCAGGCAA+AGG | 0.579127 | 2_1:-28167178 | None:intergenic |
| TGGAAGTTTCCACAGTAAGT+AGG | 0.579702 | 2_1:-28169089 | None:intergenic |
| CTCACAAACCATTAAGGACA+TGG | 0.585097 | 2_1:+28172487 | Msa0203740:CDS |
| CTTGTTATGAAGGACCTGAA+GGG | 0.589620 | 2_1:+28168290 | Msa0203740:intron |
| ACTTCCACATTATAGGATGT+GGG | 0.591116 | 2_1:+28168351 | Msa0203740:CDS |
| GTACTACTTCGAGTTTGTAG+TGG | 0.591776 | 2_1:+28167698 | Msa0203740:CDS |
| ATCATAGGTGCTGGAGTGAG+TGG | 0.592554 | 2_1:+28166827 | Msa0203740:CDS |
| GTTCAGGCAAAGGATTTCCA+TGG | 0.599336 | 2_1:-28167168 | None:intergenic |
| GCCAACATTTCCATGCAACA+AGG | 0.599576 | 2_1:+28167755 | Msa0203740:CDS |
| GATTTCCATGGTCACCAGGT+AGG | 0.604968 | 2_1:-28167156 | None:intergenic |
| AAAGTGAATAAAGACCTGAA+TGG | 0.607315 | 2_1:-28167233 | None:intergenic |
| GGACGCCTACCTGGTGACCA+TGG | 0.607894 | 2_1:+28167151 | Msa0203740:CDS |
| TGAACAGAAAGCTCCCATAC+CGG | 0.607947 | 2_1:-28167193 | None:intergenic |
| TACAATGGCATGATACCAGT+AGG | 0.611697 | 2_1:-28169385 | None:intergenic |
| TGTTAAGTTCAACACCAAAG+TGG | 0.611740 | 2_1:+28167087 | Msa0203740:CDS |
| AACACCACCAATTGAATCAG+TGG | 0.613507 | 2_1:-28166900 | None:intergenic |
| ATACCATTGGAGATAATAGG+AGG | 0.618461 | 2_1:-28168462 | None:intergenic |
| AAGGGACCTGAGGTGTTCAA+GGG | 0.619139 | 2_1:+28167774 | Msa0203740:CDS |
| CTCCTTATGATCATTGTGCA+TGG | 0.626136 | 2_1:-28168316 | None:intergenic |
| TCAAGAGAGCATCAAAGTGG+TGG | 0.626330 | 2_1:+28169227 | Msa0203740:CDS |
| TCATAGAGTCCTACTTACTG+TGG | 0.632816 | 2_1:+28169080 | Msa0203740:CDS |
| ACTCCCCACATCCTATAATG+TGG | 0.633850 | 2_1:-28168355 | None:intergenic |
| TAATAGACCAGCAAGCCACA+TGG | 0.644884 | 2_1:-28172426 | None:intergenic |
| GAAGAAGAACTTGATTAAGG+AGG | 0.645161 | 2_1:+28172616 | Msa0203740:CDS |
| CTTCCACATTATAGGATGTG+GGG | 0.652290 | 2_1:+28168352 | Msa0203740:CDS |
| CCTGGTTTGGTGTATGGTGA+AGG | 0.657784 | 2_1:-28168417 | None:intergenic |
| ACAATGGCATGATACCAGTA+GGG | 0.660299 | 2_1:-28169384 | None:intergenic |
| CTTCACCATACACCAAACCA+GGG | 0.675353 | 2_1:+28168418 | Msa0203740:CDS |
| ACTCTCAACATAACCCACAA+AGG | 0.682237 | 2_1:-28172372 | None:intergenic |
| TCTTCAAGAGAGCATCAAAG+TGG | 0.688034 | 2_1:+28169224 | Msa0203740:CDS |
| GAGTGTGTACAGGCAAACCA+AGG | 0.694042 | 2_1:+28167915 | Msa0203740:CDS |
| CCAACATTTCCATGCAACAA+GGG | 0.700966 | 2_1:+28167756 | Msa0203740:CDS |
| CATCCGAGATACGTTCCATG+TGG | 0.741395 | 2_1:+28172411 | Msa0203740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATAAAATAAATT+TGG | + | chr2_1:28170797-28170816 | Msa0203740:intron | 0.0% |
| !!! | TTTTTTTATATTTTTTTTTT+TGG | - | chr2_1:28171842-28171861 | None:intergenic | 0.0% |
| !! | AAAATAAAATCTTATTATAG+GGG | + | chr2_1:28167538-28167557 | Msa0203740:intron | 10.0% |
| !!! | AGAAAAAAATTACTTTTTTA+AGG | + | chr2_1:28168546-28168565 | Msa0203740:intron | 10.0% |
| !!! | AAAAAAAAGTCATTTAATTT+TGG | - | chr2_1:28169582-28169601 | None:intergenic | 10.0% |
| !!! | TAGTTTTTAGTATTTTTAAT+GGG | - | chr2_1:28170001-28170020 | None:intergenic | 10.0% |
| !!! | ATAGTTTTTAGTATTTTTAA+TGG | - | chr2_1:28170002-28170021 | None:intergenic | 10.0% |
| !!! | ATTTTTTTAAAAAGTGATTA+GGG | - | chr2_1:28171020-28171039 | None:intergenic | 10.0% |
| !!! | AAATAATACATTTTGAAATA+AGG | + | chr2_1:28171043-28171062 | Msa0203740:intron | 10.0% |
| !!! | AATAATACATTTTGAAATAA+GGG | + | chr2_1:28171044-28171063 | Msa0203740:intron | 10.0% |
| !!! | AATTAAACAAACTTAATTTT+AGG | - | chr2_1:28171424-28171443 | None:intergenic | 10.0% |
| !! | TTTAAAAATTTAAGAGTTTA+AGG | - | chr2_1:28171449-28171468 | None:intergenic | 10.0% |
| !! | ATAACTATTAAAATTATGTA+AGG | + | chr2_1:28171768-28171787 | Msa0203740:intron | 10.0% |
| !! | GAAAAAAATTGAACTTTATT+AGG | - | chr2_1:28166750-28166769 | None:intergenic | 15.0% |
| !! | AAATTAAATGAGATGAAAAT+TGG | + | chr2_1:28167305-28167324 | Msa0203740:intron | 15.0% |
| !!! | AAGTTGATAGTAAAATAATT+AGG | - | chr2_1:28167667-28167686 | None:intergenic | 15.0% |
| !!! | TCTATGATATTTATCTTTTA+TGG | + | chr2_1:28170050-28170069 | Msa0203740:intron | 15.0% |
| !!! | TGATTTAATATATGTTTTTG+TGG | + | chr2_1:28170077-28170096 | Msa0203740:intron | 15.0% |
| !! | ATCAAAAAGAATTACTAATA+TGG | - | chr2_1:28170739-28170758 | None:intergenic | 15.0% |
| !! | AAATGTAATATACTCATATA+CGG | + | chr2_1:28170822-28170841 | Msa0203740:intron | 15.0% |
| !!! | TTTTTTTAAAAAGTGATTAG+GGG | - | chr2_1:28171019-28171038 | None:intergenic | 15.0% |
| !!! | CATTTTTTTAAAAAGTGATT+AGG | - | chr2_1:28171021-28171040 | None:intergenic | 15.0% |
| !!! | AATTTTATAGACTATAATAG+TGG | - | chr2_1:28171259-28171278 | None:intergenic | 15.0% |
| !!! | ATATCTAACCTTTTATTTTT+GGG | - | chr2_1:28171303-28171322 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTTAGTA+AGG | - | chr2_1:28171361-28171380 | None:intergenic | 15.0% |
| !! | GAAATTAAAAAAATGAAACT+TGG | - | chr2_1:28172274-28172293 | None:intergenic | 15.0% |
| !!! | ACATTTTATTAAATAGCATT+TGG | - | chr2_1:28172706-28172725 | None:intergenic | 15.0% |
| !! | CTTGAACAAATCAAAATAAA+CGG | - | chr2_1:28167065-28167084 | None:intergenic | 20.0% |
| !! | AAACAAGCATATTAAACAAT+TGG | + | chr2_1:28167421-28167440 | Msa0203740:intron | 20.0% |
| !! | CAACATGTAAACTAAATTAA+AGG | - | chr2_1:28167614-28167633 | None:intergenic | 20.0% |
| !!! | GTCTAAATATTTTAACATAG+TGG | - | chr2_1:28168030-28168049 | None:intergenic | 20.0% |
| !! | AAATATTTAGACAAATACCT+CGG | + | chr2_1:28168038-28168057 | Msa0203740:intron | 20.0% |
| !!! | TTAACTATATTTTAATACCG+AGG | - | chr2_1:28168058-28168077 | None:intergenic | 20.0% |
| !! | ATTTCACAATGAAAGTAATT+GGG | - | chr2_1:28168238-28168257 | None:intergenic | 20.0% |
| !! | TATTTCACAATGAAAGTAAT+TGG | - | chr2_1:28168239-28168258 | None:intergenic | 20.0% |
| !! | CATATATACATATATACCAT+TGG | - | chr2_1:28168478-28168497 | None:intergenic | 20.0% |
| !! | TGATGTACAAATATAGTATT+CGG | + | chr2_1:28168621-28168640 | Msa0203740:intron | 20.0% |
| !! | TTAATTATTGTCTTTATGCT+TGG | + | chr2_1:28168898-28168917 | Msa0203740:intron | 20.0% |
| !! | TTTAGATTGAGTATATTGAT+TGG | - | chr2_1:28169456-28169475 | None:intergenic | 20.0% |
| !! | ATTATACTCCTTCTAAATTT+AGG | + | chr2_1:28169792-28169811 | Msa0203740:intron | 20.0% |
| !! | TAATACATCCTAAATTTAGA+AGG | - | chr2_1:28169803-28169822 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCATGCTTTTTTA+CGG | - | chr2_1:28169896-28169915 | None:intergenic | 20.0% |
| !!! | TTAATATTATTTTGCATGCA+TGG | + | chr2_1:28170021-28170040 | Msa0203740:intron | 20.0% |
| !! | ACAACTGTAAAATTTATAGA+TGG | + | chr2_1:28170594-28170613 | Msa0203740:intron | 20.0% |
| !! | AATGTAATATACTCATATAC+GGG | + | chr2_1:28170823-28170842 | Msa0203740:intron | 20.0% |
| !!! | CATATCTAACCTTTTATTTT+TGG | - | chr2_1:28171304-28171323 | None:intergenic | 20.0% |
| !!! | TAAAAGGTTAGATATGTTTT+TGG | + | chr2_1:28171308-28171327 | Msa0203740:intron | 20.0% |
| !!! | TAGAAGTTCTCAATTTTATA+GGG | - | chr2_1:28171335-28171354 | None:intergenic | 20.0% |
| !!! | TTAGAAGTTCTCAATTTTAT+AGG | - | chr2_1:28171336-28171355 | None:intergenic | 20.0% |
| !!! | AAACAAACTTAATTTTAGGA+GGG | - | chr2_1:28171420-28171439 | None:intergenic | 20.0% |
| !!! | TAAACAAACTTAATTTTAGG+AGG | - | chr2_1:28171421-28171440 | None:intergenic | 20.0% |
| !!! | CACATTTAGAACAATATAAA+AGG | + | chr2_1:28171483-28171502 | Msa0203740:intron | 20.0% |
| !! | TAAACAAGTTTGAATTTAGA+AGG | + | chr2_1:28171707-28171726 | Msa0203740:intron | 20.0% |
| !!! | TCATTTTCAGATGAAAATAT+AGG | + | chr2_1:28171865-28171884 | Msa0203740:intron | 20.0% |
| !!! | AAAAGAGCAATTTTGTATAA+AGG | - | chr2_1:28172013-28172032 | None:intergenic | 20.0% |
| !!! | TCAAATTATCTGTTGATTTT+GGG | - | chr2_1:28172180-28172199 | None:intergenic | 20.0% |
| ! | TAATCTTTACTTTCTCTTTC+AGG | - | chr2_1:28167001-28167020 | None:intergenic | 25.0% |
| !! | ATGTTTCTATAAGAGAAACA+AGG | - | chr2_1:28167475-28167494 | None:intergenic | 25.0% |
| ! | TAGAAACATAATACATGCAA+AGG | + | chr2_1:28167486-28167505 | Msa0203740:intron | 25.0% |
| ! | AGAAACATAATACATGCAAA+GGG | + | chr2_1:28167487-28167506 | Msa0203740:intron | 25.0% |
| !!! | TTGCTTTAAACTTGTTATGA+AGG | + | chr2_1:28168280-28168299 | Msa0203740:intron | 25.0% |
| ! | TATATACCATTGGAGATAAT+AGG | - | chr2_1:28168468-28168487 | None:intergenic | 25.0% |
| !! | TTTTATTAACCGTAGTAGTT+TGG | - | chr2_1:28168847-28168866 | None:intergenic | 25.0% |
| !!! | TAATTGATGACTTTTAACAG+AGG | + | chr2_1:28169041-28169060 | Msa0203740:intron | 25.0% |
| !! | AAAAAGTGATCCTATCTTTT+TGG | + | chr2_1:28169909-28169928 | Msa0203740:intron | 25.0% |
| !! | AAAAGTGATCCTATCTTTTT+GGG | + | chr2_1:28169910-28169929 | Msa0203740:intron | 25.0% |
| !!! | CTTTTGTATGGATATTTTTG+TGG | + | chr2_1:28170115-28170134 | Msa0203740:intron | 25.0% |
| ! | ATGTCTTCATAAACTTAGTT+GGG | - | chr2_1:28170203-28170222 | None:intergenic | 25.0% |
| ! | CTTAAAATAAAGCCTTTGAT+AGG | - | chr2_1:28170402-28170421 | None:intergenic | 25.0% |
| !!! | TGAAATTTGTTACACAAACT+AGG | - | chr2_1:28170477-28170496 | None:intergenic | 25.0% |
| ! | AATCATGTCTGATAACAATA+AGG | + | chr2_1:28170633-28170652 | Msa0203740:intron | 25.0% |
| !!! | TTGATTTGTGTGAATTGTTA+AGG | - | chr2_1:28170712-28170731 | None:intergenic | 25.0% |
| ! | CCTATTAATTTAATTAAGCC+GGG | - | chr2_1:28170889-28170908 | None:intergenic | 25.0% |
| ! | GCCTATTAATTTAATTAAGC+CGG | - | chr2_1:28170890-28170909 | None:intergenic | 25.0% |
| !!! | ATACATTTTGAAATAAGGGT+TGG | + | chr2_1:28171048-28171067 | Msa0203740:intron | 25.0% |
| !!! | TACATTTTGAAATAAGGGTT+GGG | + | chr2_1:28171049-28171068 | Msa0203740:intron | 25.0% |
| ! | AATTGGGCTTATAAATAAAG+TGG | + | chr2_1:28171102-28171121 | Msa0203740:intron | 25.0% |
| ! | ATTGGGCTTATAAATAAAGT+GGG | + | chr2_1:28171103-28171122 | Msa0203740:intron | 25.0% |
| ! | AATCTTGACCCAAAAATAAA+AGG | + | chr2_1:28171292-28171311 | Msa0203740:intron | 25.0% |
| !! | TTGGATAAATATGTTTCTGA+TGG | - | chr2_1:28171823-28171842 | None:intergenic | 25.0% |
| ! | AACAATCATTCTAAACATGA+TGG | - | chr2_1:28171935-28171954 | None:intergenic | 25.0% |
| ! | TGATTTGATTAGTAGATGTT+AGG | + | chr2_1:28172032-28172051 | Msa0203740:intron | 25.0% |
| !!! | CAAATTATCTGTTGATTTTG+GGG | - | chr2_1:28172179-28172198 | None:intergenic | 25.0% |
| !!! | GTCAAATTATCTGTTGATTT+TGG | - | chr2_1:28172181-28172200 | None:intergenic | 25.0% |
| ! | AAGCAATGAAAAAATCTACA+AGG | + | chr2_1:28172510-28172529 | Msa0203740:CDS | 25.0% |
| !!! | AATCTACAAGGTTTTATACA+AGG | + | chr2_1:28172522-28172541 | Msa0203740:CDS | 25.0% |
| ! | CTTCACAAATTTCATCATTA+TGG | - | chr2_1:28172574-28172593 | None:intergenic | 25.0% |
| ! | TGATGAAATTTGTGAAGATT+TGG | + | chr2_1:28172577-28172596 | Msa0203740:CDS | 25.0% |
| ! | GATGAAATTTGTGAAGATTT+GGG | + | chr2_1:28172578-28172597 | Msa0203740:CDS | 25.0% |
| !!! | GGAAGATTGAGTTTTTTATT+TGG | + | chr2_1:28172673-28172692 | Msa0203740:exon | 25.0% |
| ATGAATTTAGTGATTTCCCT+TGG | + | chr2_1:28166975-28166994 | Msa0203740:CDS | 30.0% | |
| AAACTTGATTTCAACCACTT+TGG | - | chr2_1:28167104-28167123 | None:intergenic | 30.0% | |
| ! | TGGTTGAAATCAAGTTTGTT+CGG | + | chr2_1:28167107-28167126 | Msa0203740:CDS | 30.0% |
| !!! | GACAAAGAAGGTTTTGATTT+TGG | + | chr2_1:28167130-28167149 | Msa0203740:CDS | 30.0% |
| AAAGTGAATAAAGACCTGAA+TGG | - | chr2_1:28167236-28167255 | None:intergenic | 30.0% | |
| TTCTATAAGAGAAACAAGGA+AGG | - | chr2_1:28167471-28167490 | None:intergenic | 30.0% | |
| TACATGCAAAGGGTAAAAAT+TGG | + | chr2_1:28167497-28167516 | Msa0203740:intron | 30.0% | |
| CATAGTGAAAATTGTTACCT+TGG | - | chr2_1:28167935-28167954 | None:intergenic | 30.0% | |
| ATGTGTTTAATGTGTACACA+AGG | + | chr2_1:28167974-28167993 | Msa0203740:intron | 30.0% | |
| TAATTGGGCAGATGTTAATT+TGG | - | chr2_1:28168223-28168242 | None:intergenic | 30.0% | |
| ATTTGAAAGACAGTTCAAAC+AGG | + | chr2_1:28168710-28168729 | Msa0203740:intron | 30.0% | |
| AGTTGTAAAATGAGCTCAAA+AGG | + | chr2_1:28168777-28168796 | Msa0203740:intron | 30.0% | |
| AAACTTCCATTAGAGAAGTA+TGG | + | chr2_1:28169103-28169122 | Msa0203740:CDS | 30.0% | |
| ! | AACTTCCATTAGAGAAGTAT+GGG | + | chr2_1:28169104-28169123 | Msa0203740:CDS | 30.0% |
| ATGCAAAATCTTCCTGAAAA+GGG | - | chr2_1:28169144-28169163 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAATGAGGCTGATA+AGG | + | chr2_1:28169192-28169211 | Msa0203740:CDS | 30.0% |
| !! | TTTTTCAATGAGGCTGATAA+GGG | + | chr2_1:28169193-28169212 | Msa0203740:CDS | 30.0% |
| TATTCCAACAAGCTAGAAAA+AGG | - | chr2_1:28169364-28169383 | None:intergenic | 30.0% | |
| ATTTGTGTTTACCTGTACAA+TGG | - | chr2_1:28169403-28169422 | None:intergenic | 30.0% | |
| ! | GATTGAGTATATTGATTGGA+GGG | - | chr2_1:28169452-28169471 | None:intergenic | 30.0% |
| ! | AGATTGAGTATATTGATTGG+AGG | - | chr2_1:28169453-28169472 | None:intergenic | 30.0% |
| ! | CACTAATGATCATTTTACGA+TGG | + | chr2_1:28169633-28169652 | Msa0203740:intron | 30.0% |
| ! | TATATGCCCATAACTTGTAT+GGG | - | chr2_1:28169660-28169679 | None:intergenic | 30.0% |
| ! | TTATATGCCCATAACTTGTA+TGG | - | chr2_1:28169661-28169680 | None:intergenic | 30.0% |
| !! | TCATACTCTCTACTTTTGTA+TGG | + | chr2_1:28170103-28170122 | Msa0203740:intron | 30.0% |
| CATGTCTTCATAAACTTAGT+TGG | - | chr2_1:28170204-28170223 | None:intergenic | 30.0% | |
| !! | TTGTTCTTAGCATCACTTTT+CGG | + | chr2_1:28170290-28170309 | Msa0203740:intron | 30.0% |
| TAAAGCCTTTGATAGGTATA+AGG | - | chr2_1:28170395-28170414 | None:intergenic | 30.0% | |
| !!! | CAAAGGCTTTATTTTAAGTC+TGG | + | chr2_1:28170404-28170423 | Msa0203740:intron | 30.0% |
| AGTACATTGCACAAATTGAA+AGG | - | chr2_1:28170527-28170546 | None:intergenic | 30.0% | |
| TAATAACCATACTTGACCTT+AGG | + | chr2_1:28170671-28170690 | Msa0203740:intron | 30.0% | |
| CCCGGCTTAATTAAATTAAT+AGG | + | chr2_1:28170886-28170905 | Msa0203740:intron | 30.0% | |
| ACTCATTTATTAAACGAGCT+AGG | + | chr2_1:28170931-28170950 | Msa0203740:intron | 30.0% | |
| TTTAAAAAGTGATTAGGGGT+GGG | - | chr2_1:28171015-28171034 | None:intergenic | 30.0% | |
| !! | TTTTAAAAAGTGATTAGGGG+TGG | - | chr2_1:28171016-28171035 | None:intergenic | 30.0% |
| TTATAAGCCCAATTAGTAGT+GGG | - | chr2_1:28171096-28171115 | None:intergenic | 30.0% | |
| TTTATAAGCCCAATTAGTAG+TGG | - | chr2_1:28171097-28171116 | None:intergenic | 30.0% | |
| !! | TCACATATAAATGGGTTGAA+GGG | - | chr2_1:28171135-28171154 | None:intergenic | 30.0% |
| !! | ATCACATATAAATGGGTTGA+AGG | - | chr2_1:28171136-28171155 | None:intergenic | 30.0% |
| GTGGAACATCACATATAAAT+GGG | - | chr2_1:28171143-28171162 | None:intergenic | 30.0% | |
| ATTTATATGTGATGTTCCAC+CGG | + | chr2_1:28171143-28171162 | Msa0203740:intron | 30.0% | |
| CTAAAACTAGAGTTGTCAAA+TGG | - | chr2_1:28171195-28171214 | None:intergenic | 30.0% | |
| TGTGTCAATTGTTAATTGAG+TGG | - | chr2_1:28171961-28171980 | None:intergenic | 30.0% | |
| AGCTATGATTTATTTGTGAC+AGG | + | chr2_1:28172318-28172337 | Msa0203740:intron | 30.0% | |
| GCTATGATTTATTTGTGACA+GGG | + | chr2_1:28172319-28172338 | Msa0203740:intron | 30.0% | |
| CTATGATTTATTTGTGACAG+GGG | + | chr2_1:28172320-28172339 | Msa0203740:intron | 30.0% | |
| AAATTTGTGAAGATTTGGGT+TGG | + | chr2_1:28172582-28172601 | Msa0203740:CDS | 30.0% | |
| TAAAGACAACCCACCAATTA+TGG | + | chr2_1:28166790-28166809 | Msa0203740:CDS | 35.0% | |
| TTCTTGACACCATAATTGGT+GGG | - | chr2_1:28166802-28166821 | None:intergenic | 35.0% | |
| ATTCTTGACACCATAATTGG+TGG | - | chr2_1:28166803-28166822 | None:intergenic | 35.0% | |
| CCAATTCTTGACACCATAAT+TGG | - | chr2_1:28166806-28166825 | None:intergenic | 35.0% | |
| ! | CCAATTATGGTGTCAAGAAT+TGG | + | chr2_1:28166803-28166822 | Msa0203740:CDS | 35.0% |
| GTGTCAAGAATTGGTATCAT+AGG | + | chr2_1:28166812-28166831 | Msa0203740:CDS | 35.0% | |
| !! | GTGTGATAGTTGTTTTGCTA+CGG | - | chr2_1:28166858-28166877 | None:intergenic | 35.0% |
| CAGTGGCTTCAAAAACAATA+GGG | - | chr2_1:28166886-28166905 | None:intergenic | 35.0% | |
| TCAGTGGCTTCAAAAACAAT+AGG | - | chr2_1:28166887-28166906 | None:intergenic | 35.0% | |
| !! | TTTGAAGCCACTGATTCAAT+TGG | + | chr2_1:28166893-28166912 | Msa0203740:CDS | 35.0% |
| TTTGGAGACATTGTTCCTAT+AGG | + | chr2_1:28166921-28166940 | Msa0203740:CDS | 35.0% | |
| TTGAAGCTTAGTACACCTAT+AGG | - | chr2_1:28166939-28166958 | None:intergenic | 35.0% | |
| CTAAGCTTCAATCACAAACA+TGG | + | chr2_1:28166948-28166967 | Msa0203740:CDS | 35.0% | |
| TGTTAAGTTCAACACCAAAG+TGG | + | chr2_1:28167087-28167106 | Msa0203740:CDS | 35.0% | |
| ! | GGTTGAAATCAAGTTTGTTC+GGG | + | chr2_1:28167108-28167127 | Msa0203740:CDS | 35.0% |
| GGGGAATATTATGCAAGAAA+TGG | + | chr2_1:28167557-28167576 | Msa0203740:intron | 35.0% | |
| TTAAAGGCTATGCTGTTGTT+AGG | - | chr2_1:28167598-28167617 | None:intergenic | 35.0% | |
| !! | ATCAGCTATTGATTTAGCCA+TGG | + | chr2_1:28167893-28167912 | Msa0203740:CDS | 35.0% |
| AACCATGCACAATGATCATA+AGG | + | chr2_1:28168314-28168333 | Msa0203740:CDS | 35.0% | |
| TGATCATAAGGAGTTTGCAT+TGG | + | chr2_1:28168326-28168345 | Msa0203740:CDS | 35.0% | |
| ATTGGACACTTCCACATTAT+AGG | + | chr2_1:28168344-28168363 | Msa0203740:CDS | 35.0% | |
| ACTTCCACATTATAGGATGT+GGG | + | chr2_1:28168351-28168370 | Msa0203740:CDS | 35.0% | |
| GTTGCGTAGAACATGAAAAA+TGG | - | chr2_1:28168382-28168401 | None:intergenic | 35.0% | |
| !! | CTTTTAAGTAAACCCTGGTT+TGG | - | chr2_1:28168433-28168452 | None:intergenic | 35.0% |
| !! | AAAGGCTTTTAAGTAAACCC+TGG | - | chr2_1:28168438-28168457 | None:intergenic | 35.0% |
| ! | GAGATAATAGGAGGCATAAA+AGG | - | chr2_1:28168456-28168475 | None:intergenic | 35.0% |
| ATACCATTGGAGATAATAGG+AGG | - | chr2_1:28168465-28168484 | None:intergenic | 35.0% | |
| ATCTGTGATCCAAACTACTA+CGG | + | chr2_1:28168835-28168854 | Msa0203740:intron | 35.0% | |
| TTCAACCCATACTTCTCTAA+TGG | - | chr2_1:28169112-28169131 | None:intergenic | 35.0% | |
| GATGCAAAATCTTCCTGAAA+AGG | - | chr2_1:28169145-28169164 | None:intergenic | 35.0% | |
| !!! | ACCAGAGAGTTTTTTCAATG+AGG | + | chr2_1:28169183-28169202 | Msa0203740:CDS | 35.0% |
| TTCTTGCAACTGGTTATGAT+GGG | + | chr2_1:28169308-28169327 | Msa0203740:CDS | 35.0% | |
| ! | GTTTTGCTGAGTATGTTGAA+TGG | - | chr2_1:28169731-28169750 | None:intergenic | 35.0% |
| !!! | TTTCATGCTTTTTTACGGTC+CGG | - | chr2_1:28169891-28169910 | None:intergenic | 35.0% |
| !! | ACCAGGCCTATATTTTTCAA+GGG | + | chr2_1:28169940-28169959 | Msa0203740:intron | 35.0% |
| !!! | GCCTATATTTTTCAAGGGTT+GGG | + | chr2_1:28169945-28169964 | Msa0203740:intron | 35.0% |
| ACCCAACCCTTGAAAAATAT+AGG | - | chr2_1:28169949-28169968 | None:intergenic | 35.0% | |
| !!! | ATATTTTTCAAGGGTTGGGT+CGG | + | chr2_1:28169949-28169968 | Msa0203740:intron | 35.0% |
| !! | TGTTCTTAGCATCACTTTTC+GGG | + | chr2_1:28170291-28170310 | Msa0203740:intron | 35.0% |
| AGGCCTAGTTGAAAAAACTA+AGG | + | chr2_1:28170357-28170376 | Msa0203740:intron | 35.0% | |
| !!! | AGGCCTTAGTTTTTTCAACT+AGG | - | chr2_1:28170363-28170382 | None:intergenic | 35.0% |
| !!! | CTTTTTTATAAGCCTAAGCC+CGG | + | chr2_1:28170868-28170887 | Msa0203740:intron | 35.0% |
| AATTTAATTAAGCCGGGCTT+AGG | - | chr2_1:28170883-28170902 | None:intergenic | 35.0% | |
| TTGTATAGCCCACTACTAAT+TGG | + | chr2_1:28171085-28171104 | Msa0203740:intron | 35.0% | |
| TGTATAGCCCACTACTAATT+GGG | + | chr2_1:28171086-28171105 | Msa0203740:intron | 35.0% | |
| !! | ACATATAAATGGGTTGAAGG+GGG | - | chr2_1:28171133-28171152 | None:intergenic | 35.0% |
| !! | CACATATAAATGGGTTGAAG+GGG | - | chr2_1:28171134-28171153 | None:intergenic | 35.0% |
| GGTGGAACATCACATATAAA+TGG | - | chr2_1:28171144-28171163 | None:intergenic | 35.0% | |
| TTTATATGTGATGTTCCACC+GGG | + | chr2_1:28171144-28171163 | Msa0203740:intron | 35.0% | |
| TGACTATTCACTCTCAACTA+TGG | - | chr2_1:28172298-28172317 | None:intergenic | 35.0% | |
| !! | TCATCCATTGATTCCAAACA+TGG | + | chr2_1:28172349-28172368 | Msa0203740:CDS | 35.0% |
| AATGCTCTCACAAACCATTA+AGG | + | chr2_1:28172481-28172500 | Msa0203740:CDS | 35.0% | |
| GAGGAAGAAGAACTTGATTA+AGG | + | chr2_1:28172613-28172632 | Msa0203740:CDS | 35.0% | |
| GAAGAAGAACTTGATTAAGG+AGG | + | chr2_1:28172616-28172635 | Msa0203740:CDS | 35.0% | |
| GGTTGTCTTTAGTCAGCATA+GGG | - | chr2_1:28166781-28166800 | None:intergenic | 40.0% | |
| AGAATTGGTATCATAGGTGC+TGG | + | chr2_1:28166818-28166837 | Msa0203740:CDS | 40.0% | |
| AACACCACCAATTGAATCAG+TGG | - | chr2_1:28166903-28166922 | None:intergenic | 40.0% | |
| !! | CTGATTCAATTGGTGGTGTT+TGG | + | chr2_1:28166903-28166922 | Msa0203740:CDS | 40.0% |
| TACTTTCTCTTTCAGGCCAA+GGG | - | chr2_1:28166994-28167013 | None:intergenic | 40.0% | |
| TTACTTTCTCTTTCAGGCCA+AGG | - | chr2_1:28166995-28167014 | None:intergenic | 40.0% | |
| ! | AAGTTTGTTCGGGACAAAGA+AGG | + | chr2_1:28167118-28167137 | Msa0203740:CDS | 40.0% |
| TAATGAATCAGACGCCATTC+AGG | + | chr2_1:28167219-28167238 | Msa0203740:CDS | 40.0% | |
| ! | GGTATTGTTTGTCCCTTTTC+AGG | + | chr2_1:28167442-28167461 | Msa0203740:intron | 40.0% |
| ! | GTACTACTTCGAGTTTGTAG+TGG | + | chr2_1:28167698-28167717 | Msa0203740:CDS | 40.0% |
| ! | GTGGTTTGCACTGGAAAATA+TGG | + | chr2_1:28167717-28167736 | Msa0203740:CDS | 40.0% |
| CATGGAAATGTTGGCATCAA+TGG | - | chr2_1:28167750-28167769 | None:intergenic | 40.0% | |
| CCAACATTTCCATGCAACAA+GGG | + | chr2_1:28167756-28167775 | Msa0203740:CDS | 40.0% | |
| AGCTACTAGTGACCTTGTTA+AGG | + | chr2_1:28167839-28167858 | Msa0203740:CDS | 40.0% | |
| GCTACTAGTGACCTTGTTAA+GGG | + | chr2_1:28167840-28167859 | Msa0203740:CDS | 40.0% | |
| TGACCTTGTTAAGGGAAAGA+AGG | + | chr2_1:28167848-28167867 | Msa0203740:CDS | 40.0% | |
| CAACCTTCTTTCCCTTAACA+AGG | - | chr2_1:28167854-28167873 | None:intergenic | 40.0% | |
| TGTTAAGGGAAAGAAGGTTG+TGG | + | chr2_1:28167854-28167873 | Msa0203740:CDS | 40.0% | |
| !! | ACTTGTTATGAAGGACCTGA+AGG | + | chr2_1:28168289-28168308 | Msa0203740:intron | 40.0% |
| ! | CTTGTTATGAAGGACCTGAA+GGG | + | chr2_1:28168290-28168309 | Msa0203740:intron | 40.0% |
| CTCCTTATGATCATTGTGCA+TGG | - | chr2_1:28168319-28168338 | None:intergenic | 40.0% | |
| CACTTCCACATTATAGGATG+TGG | + | chr2_1:28168350-28168369 | Msa0203740:CDS | 40.0% | |
| CTTCCACATTATAGGATGTG+GGG | + | chr2_1:28168352-28168371 | Msa0203740:CDS | 40.0% | |
| ATGCCTCCTATTATCTCCAA+TGG | + | chr2_1:28168459-28168478 | Msa0203740:CDS | 40.0% | |
| TGATACTTTGAGCCGTCTAA+TGG | + | chr2_1:28168811-28168830 | Msa0203740:intron | 40.0% | |
| GATACTTTGAGCCGTCTAAT+GGG | + | chr2_1:28168812-28168831 | Msa0203740:intron | 40.0% | |
| TCATAGAGTCCTACTTACTG+TGG | + | chr2_1:28169080-28169099 | Msa0203740:CDS | 40.0% | |
| TGGAAGTTTCCACAGTAAGT+AGG | - | chr2_1:28169092-28169111 | None:intergenic | 40.0% | |
| GCCTCATTGAAAAAACTCTC+TGG | - | chr2_1:28169187-28169206 | None:intergenic | 40.0% | |
| !! | TCTTCAAGAGAGCATCAAAG+TGG | + | chr2_1:28169224-28169243 | Msa0203740:CDS | 40.0% |
| !!! | TCAAAGTGGTGGTTTTGGAA+TGG | + | chr2_1:28169238-28169257 | Msa0203740:CDS | 40.0% |
| GATGTTGTTCTTCTTGCAAC+TGG | + | chr2_1:28169298-28169317 | Msa0203740:CDS | 40.0% | |
| CTTCTTGCAACTGGTTATGA+TGG | + | chr2_1:28169307-28169326 | Msa0203740:CDS | 40.0% | |
| ! | AGAAAAAGGCTCTGGCAAAA+TGG | - | chr2_1:28169350-28169369 | None:intergenic | 40.0% |
| AACAAGCTAGAAAAAGGCTC+TGG | - | chr2_1:28169358-28169377 | None:intergenic | 40.0% | |
| !!! | AGAGCCTTTTTCTAGCTTGT+TGG | + | chr2_1:28169357-28169376 | Msa0203740:CDS | 40.0% |
| ACAATGGCATGATACCAGTA+GGG | - | chr2_1:28169387-28169406 | None:intergenic | 40.0% | |
| TACAATGGCATGATACCAGT+AGG | - | chr2_1:28169388-28169407 | None:intergenic | 40.0% | |
| GATGGACCCATACAAGTTAT+GGG | + | chr2_1:28169651-28169670 | Msa0203740:intron | 40.0% | |
| TGCTGAGTATGTTGAATGGA+GGG | - | chr2_1:28169727-28169746 | None:intergenic | 40.0% | |
| TTGCTGAGTATGTTGAATGG+AGG | - | chr2_1:28169728-28169747 | None:intergenic | 40.0% | |
| ATAGAGCTGTCAAAATGTGC+CGG | + | chr2_1:28169824-28169843 | Msa0203740:intron | 40.0% | |
| !! | GTACTAAAATAGTGGGTCGA+GGG | - | chr2_1:28169865-28169884 | None:intergenic | 40.0% |
| !! | TGTACTAAAATAGTGGGTCG+AGG | - | chr2_1:28169866-28169885 | None:intergenic | 40.0% |
| CCGGACTGTACTAAAATAGT+GGG | - | chr2_1:28169872-28169891 | None:intergenic | 40.0% | |
| !!! | CCCACTATTTTAGTACAGTC+CGG | + | chr2_1:28169869-28169888 | Msa0203740:intron | 40.0% |
| TCCGGACTGTACTAAAATAG+TGG | - | chr2_1:28169873-28169892 | None:intergenic | 40.0% | |
| !!! | TGATCCTATCTTTTTGGGTC+AGG | + | chr2_1:28169915-28169934 | Msa0203740:intron | 40.0% |
| CTTGAAAAATATAGGCCTGG+TGG | - | chr2_1:28169941-28169960 | None:intergenic | 40.0% | |
| ! | CACCAGGCCTATATTTTTCA+AGG | + | chr2_1:28169939-28169958 | Msa0203740:intron | 40.0% |
| ACCCTTGAAAAATATAGGCC+TGG | - | chr2_1:28169944-28169963 | None:intergenic | 40.0% | |
| !!! | GGCCTATATTTTTCAAGGGT+TGG | + | chr2_1:28169944-28169963 | Msa0203740:intron | 40.0% |
| !!! | TATTTTTCAAGGGTTGGGTC+GGG | + | chr2_1:28169950-28169969 | Msa0203740:intron | 40.0% |
| !! | GTTCTTAGCATCACTTTTCG+GGG | + | chr2_1:28170292-28170311 | Msa0203740:intron | 40.0% |
| TAGCCTATTTATGCAAAGCC+CGG | - | chr2_1:28170338-28170357 | None:intergenic | 40.0% | |
| AAAAACTAAGGCCTAAGCCT+TGG | + | chr2_1:28170369-28170388 | Msa0203740:intron | 40.0% | |
| CTTTGATAGGTATAAGGCCA+AGG | - | chr2_1:28170389-28170408 | None:intergenic | 40.0% | |
| !! | CTTGGCCTTATACCTATCAA+AGG | + | chr2_1:28170387-28170406 | Msa0203740:intron | 40.0% |
| !!! | GCTTTATTTTAAGTCTGGCC+TGG | + | chr2_1:28170409-28170428 | Msa0203740:intron | 40.0% |
| ! | AGGCTTTTAGACAGGCTAAT+AGG | - | chr2_1:28170457-28170476 | None:intergenic | 40.0% |
| ! | CACAAACTAGGCTTTTAGAC+AGG | - | chr2_1:28170465-28170484 | None:intergenic | 40.0% |
| GATATGCCTAAGGTCAAGTA+TGG | - | chr2_1:28170680-28170699 | None:intergenic | 40.0% | |
| ! | GTTTGCTACTGATATGCCTA+AGG | - | chr2_1:28170690-28170709 | None:intergenic | 40.0% |
| AAAAGCCTATCAAGCCTATC+AGG | - | chr2_1:28170853-28170872 | None:intergenic | 40.0% | |
| !!! | TTTTGAAATAAGGGTTGGGC+CGG | + | chr2_1:28171053-28171072 | Msa0203740:intron | 40.0% |
| ACTAGAGTTGTCAAATGGAC+CGG | - | chr2_1:28171190-28171209 | None:intergenic | 40.0% | |
| ! | TTGGGGTTTGATAGCTCAAT+TGG | - | chr2_1:28172162-28172181 | None:intergenic | 40.0% |
| ! | AAGGCCATGTTTGGAATCAA+TGG | - | chr2_1:28172356-28172375 | None:intergenic | 40.0% |
| ATTCCAAACATGGCCTTTGT+GGG | + | chr2_1:28172359-28172378 | Msa0203740:CDS | 40.0% | |
| ACTCTCAACATAACCCACAA+AGG | - | chr2_1:28172375-28172394 | None:intergenic | 40.0% | |
| CTCACAAACCATTAAGGACA+TGG | + | chr2_1:28172487-28172506 | Msa0203740:CDS | 40.0% | |
| CATTGCTTCCATGTCCTTAA+TGG | - | chr2_1:28172498-28172517 | None:intergenic | 40.0% | |
| ! | AGGAACTGCATCACAACTTT+TGG | + | chr2_1:28172542-28172561 | Msa0203740:CDS | 40.0% |
| !! | AAGATTTGGGTTGGCATACT+TGG | + | chr2_1:28172591-28172610 | Msa0203740:CDS | 40.0% |
| TTATAGTCAGCAGCAGTGTA+AGG | - | chr2_1:28172650-28172669 | None:intergenic | 40.0% | |
| GGGTTGTCTTTAGTCAGCAT+AGG | - | chr2_1:28166782-28166801 | None:intergenic | 45.0% | |
| !! | GAAGCCACTGATTCAATTGG+TGG | + | chr2_1:28166896-28166915 | Msa0203740:CDS | 45.0% |
| CCAAAATCTCAGCGTGAGAA+GGG | - | chr2_1:28167024-28167043 | None:intergenic | 45.0% | |
| TCCAAAATCTCAGCGTGAGA+AGG | - | chr2_1:28167025-28167044 | None:intergenic | 45.0% | |
| !! | TTTGATTTTGGACGCCTACC+TGG | + | chr2_1:28167142-28167161 | Msa0203740:CDS | 45.0% |
| AAAGGATTTCCATGGTCACC+AGG | - | chr2_1:28167163-28167182 | None:intergenic | 45.0% | |
| GTTCAGGCAAAGGATTTCCA+TGG | - | chr2_1:28167171-28167190 | None:intergenic | 45.0% | |
| AAATCCTTTGCCTGAACGTC+CGG | + | chr2_1:28167174-28167193 | Msa0203740:CDS | 45.0% | |
| TGAACAGAAAGCTCCCATAC+CGG | - | chr2_1:28167196-28167215 | None:intergenic | 45.0% | |
| CAAGGAAGGACACCTGAAAA+GGG | - | chr2_1:28167457-28167476 | None:intergenic | 45.0% | |
| ACAAGGAAGGACACCTGAAA+AGG | - | chr2_1:28167458-28167477 | None:intergenic | 45.0% | |
| ! | GAGTTTGTAGTGGTTTGCAC+TGG | + | chr2_1:28167708-28167727 | Msa0203740:CDS | 45.0% |
| GCCAACATTTCCATGCAACA+AGG | + | chr2_1:28167755-28167774 | Msa0203740:CDS | 45.0% | |
| CCCTTGTTGCATGGAAATGT+TGG | - | chr2_1:28167759-28167778 | None:intergenic | 45.0% | |
| GGAAAGAAGGTTGTGGTTGT+GGG | + | chr2_1:28167861-28167880 | Msa0203740:CDS | 45.0% | |
| TTTAGCCATGGAGTGTGTAC+AGG | + | chr2_1:28167905-28167924 | Msa0203740:CDS | 45.0% | |
| ACTCCCCACATCCTATAATG+TGG | - | chr2_1:28168358-28168377 | None:intergenic | 45.0% | |
| CTTCACCATACACCAAACCA+GGG | + | chr2_1:28168418-28168437 | Msa0203740:CDS | 45.0% | |
| !! | GTAAACCCTGGTTTGGTGTA+TGG | - | chr2_1:28168426-28168445 | None:intergenic | 45.0% |
| GATGAACCTAGTTCGATCGT+AGG | + | chr2_1:28168678-28168697 | Msa0203740:intron | 45.0% | |
| TTGACTCCTACGATCGAACT+AGG | - | chr2_1:28168687-28168706 | None:intergenic | 45.0% | |
| GGATCACAGATCCCATTAGA+CGG | - | chr2_1:28168826-28168845 | None:intergenic | 45.0% | |
| ! | GAAACCAGAACACCCTTTTC+AGG | + | chr2_1:28169129-28169148 | Msa0203740:CDS | 45.0% |
| !! | TCTTCCTGAAAAGGGTGTTC+TGG | - | chr2_1:28169136-28169155 | None:intergenic | 45.0% |
| !! | TCAAGAGAGCATCAAAGTGG+TGG | + | chr2_1:28169227-28169246 | Msa0203740:CDS | 45.0% |
| ! | GAGCATCAAAGTGGTGGTTT+TGG | + | chr2_1:28169233-28169252 | Msa0203740:CDS | 45.0% |
| !!! | AAGTGGTGGTTTTGGAATGG+AGG | + | chr2_1:28169241-28169260 | Msa0203740:CDS | 45.0% |
| !! | AGCTTGTTGGAATACCCTAC+TGG | + | chr2_1:28169370-28169389 | Msa0203740:CDS | 45.0% |
| CTGGTATCATGCCATTGTAC+AGG | + | chr2_1:28169389-28169408 | Msa0203740:CDS | 45.0% | |
| CGATGGACCCATACAAGTTA+TGG | + | chr2_1:28169650-28169669 | Msa0203740:intron | 45.0% | |
| GCTGAGTATGTTGAATGGAG+GGG | - | chr2_1:28169726-28169745 | None:intergenic | 45.0% | |
| !! | TTAGCATCACTTTTCGGGGT+GGG | + | chr2_1:28170296-28170315 | Msa0203740:intron | 45.0% |
| TATTTATGCAAAGCCCGGCT+CGG | - | chr2_1:28170333-28170352 | None:intergenic | 45.0% | |
| GGGCTTTGCATAAATAGGCT+AGG | + | chr2_1:28170337-28170356 | Msa0203740:intron | 45.0% | |
| TAGGTATAAGGCCAAGGCTT+AGG | - | chr2_1:28170383-28170402 | None:intergenic | 45.0% | |
| !! | GCCTTTTTAAAAGCCTGGCT+TGG | + | chr2_1:28170431-28170450 | Msa0203740:intron | 45.0% |
| !! | GCCAAGCCAGGCTTTTAAAA+AGG | - | chr2_1:28170435-28170454 | None:intergenic | 45.0% |
| AAGTGATTAGGGGTGGGAAT+AGG | - | chr2_1:28171009-28171028 | None:intergenic | 45.0% | |
| !! | ATAAATGGGTTGAAGGGGGT+CGG | - | chr2_1:28171129-28171148 | None:intergenic | 45.0% |
| GATTCCAAACATGGCCTTTG+TGG | + | chr2_1:28172358-28172377 | Msa0203740:CDS | 45.0% | |
| TAACCCACAAAGGCCATGTT+TGG | - | chr2_1:28172365-28172384 | None:intergenic | 45.0% | |
| AAGCCACATGGAACGTATCT+CGG | - | chr2_1:28172417-28172436 | None:intergenic | 45.0% | |
| TAATAGACCAGCAAGCCACA+TGG | - | chr2_1:28172429-28172448 | None:intergenic | 45.0% | |
| !!! | GAGAGCATTTTCTCAGCACT+TGG | - | chr2_1:28172470-28172489 | None:intergenic | 45.0% |
| !! | ATTTGGGTTGGCATACTTGG+AGG | + | chr2_1:28172594-28172613 | Msa0203740:CDS | 45.0% |
| ! | CACTGCTGCTGACTATAAGA+AGG | + | chr2_1:28172652-28172671 | Msa0203740:CDS | 45.0% |
| !!! | ATTTTTTTTAACAATATTAT+AGG | - | chr2_1:28167289-28167308 | None:intergenic | 5.0% |
| !! | AAAAAATAAAATCTTATTAT+AGG | + | chr2_1:28167536-28167555 | Msa0203740:intron | 5.0% |
| !! | AAAAATAAAATCTTATTATA+GGG | + | chr2_1:28167537-28167556 | Msa0203740:intron | 5.0% |
| !! | TAAATGATAAAATAATATTT+AGG | + | chr2_1:28172221-28172240 | Msa0203740:intron | 5.0% |
| !! | ATCATAGGTGCTGGAGTGAG+TGG | + | chr2_1:28166827-28166846 | Msa0203740:CDS | 50.0% |
| ! | CCCTTCTCACGCTGAGATTT+TGG | + | chr2_1:28167021-28167040 | Msa0203740:CDS | 50.0% |
| GATTTCCATGGTCACCAGGT+AGG | - | chr2_1:28167159-28167178 | None:intergenic | 50.0% | |
| TTTGCCTGAACGTCCGGTAT+GGG | + | chr2_1:28167180-28167199 | Msa0203740:CDS | 50.0% | |
| ! | AAGGGACCTGAGGTGTTCAA+GGG | + | chr2_1:28167774-28167793 | Msa0203740:CDS | 50.0% |
| ! | ACCTGAGGTGTTCAAGGGTA+AGG | + | chr2_1:28167779-28167798 | Msa0203740:CDS | 50.0% |
| ACCTTACCCTTGAACACCTC+AGG | - | chr2_1:28167783-28167802 | None:intergenic | 50.0% | |
| GGGAAAGAAGGTTGTGGTTG+TGG | + | chr2_1:28167860-28167879 | Msa0203740:CDS | 50.0% | |
| GTTTGCCTGTACACACTCCA+TGG | - | chr2_1:28167913-28167932 | None:intergenic | 50.0% | |
| GAGTGTGTACAGGCAAACCA+AGG | + | chr2_1:28167915-28167934 | Msa0203740:CDS | 50.0% | |
| ATTGTGCATGGTTGCCCTTC+AGG | - | chr2_1:28168307-28168326 | None:intergenic | 50.0% | |
| !! | CCTGGTTTGGTGTATGGTGA+AGG | - | chr2_1:28168420-28168439 | None:intergenic | 50.0% |
| CCTTCACCATACACCAAACC+AGG | + | chr2_1:28168417-28168436 | Msa0203740:CDS | 50.0% | |
| GTATGTTGAATGGAGGGGCA+TGG | - | chr2_1:28169721-28169740 | None:intergenic | 50.0% | |
| TCAAAATGTGCCGGACCGAT+CGG | + | chr2_1:28169833-28169852 | Msa0203740:intron | 50.0% | |
| !! | AAAATAGTGGGTCGAGGGTC+CGG | - | chr2_1:28169860-28169879 | None:intergenic | 50.0% |
| GTGGCCTGACCCAAAAAGAT+AGG | - | chr2_1:28169922-28169941 | None:intergenic | 50.0% | |
| !! | CTTAGCATCACTTTTCGGGG+TGG | + | chr2_1:28170295-28170314 | Msa0203740:intron | 50.0% |
| GAGCCGGGCTTTGCATAAAT+AGG | + | chr2_1:28170332-28170351 | Msa0203740:intron | 50.0% | |
| !! | GCCTGGCCTTTTTAAAAGCC+TGG | + | chr2_1:28170426-28170445 | Msa0203740:intron | 50.0% |
| !! | GCCAGGCTTTTAAAAAGGCC+AGG | - | chr2_1:28170430-28170449 | None:intergenic | 50.0% |
| ! | CATATACGGGCTGACCTGAT+AGG | + | chr2_1:28170836-28170855 | Msa0203740:intron | 50.0% |
| GCTGACCTGATAGGCTTGAT+AGG | + | chr2_1:28170845-28170864 | Msa0203740:intron | 50.0% | |
| TTAAACGAGCTAGGCTGAGC+CGG | + | chr2_1:28170940-28170959 | Msa0203740:intron | 50.0% | |
| ! | CTTTTAGTAGGCCGAGCCAT+AGG | + | chr2_1:28170964-28170983 | Msa0203740:intron | 50.0% |
| !! | TAGTGGGCTATACAACGCGA+CGG | - | chr2_1:28171080-28171099 | None:intergenic | 50.0% |
| CATCCGAGATACGTTCCATG+TGG | + | chr2_1:28172411-28172430 | Msa0203740:CDS | 50.0% | |
| ! | ATACGTTCCATGTGGCTTGC+TGG | + | chr2_1:28172419-28172438 | Msa0203740:CDS | 50.0% |
| CATACCGGACGTTCAGGCAA+AGG | - | chr2_1:28167181-28167200 | None:intergenic | 55.0% | |
| CTTTGCCTGAACGTCCGGTA+TGG | + | chr2_1:28167179-28167198 | Msa0203740:CDS | 55.0% | |
| TCCATGCAACAAGGGACCTG+AGG | + | chr2_1:28167764-28167783 | Msa0203740:CDS | 55.0% | |
| ACCTCAGGTCCCTTGTTGCA+TGG | - | chr2_1:28167768-28167787 | None:intergenic | 55.0% | |
| ! | CAAGGGACCTGAGGTGTTCA+AGG | + | chr2_1:28167773-28167792 | Msa0203740:CDS | 55.0% |
| ! | TGAATGGAGGGGCATGGAAG+TGG | - | chr2_1:28169715-28169734 | None:intergenic | 55.0% |
| CAAAATGTGCCGGACCGATC+GGG | + | chr2_1:28169834-28169853 | Msa0203740:intron | 55.0% | |
| !!! | TCTTTTTGGGTCAGGCCACC+AGG | + | chr2_1:28169923-28169942 | Msa0203740:intron | 55.0% |
| !! | TTTTCGGGGTGGGAATGAGC+CGG | + | chr2_1:28170306-28170325 | Msa0203740:intron | 55.0% |
| ACAGGCTAATAGGCCAAGCC+AGG | - | chr2_1:28170447-28170466 | None:intergenic | 55.0% | |
| TAAACGAGCTAGGCTGAGCC+GGG | + | chr2_1:28170941-28170960 | Msa0203740:intron | 55.0% | |
| !! | AGTGGGCTATACAACGCGAC+GGG | - | chr2_1:28171079-28171098 | None:intergenic | 55.0% |
| ATGTGATGTTCCACCGGGTC+AGG | + | chr2_1:28171149-28171168 | Msa0203740:intron | 55.0% | |
| TGTGATGTTCCACCGGGTCA+GGG | + | chr2_1:28171150-28171169 | Msa0203740:intron | 55.0% | |
| AGCTCCCATACCGGACGTTC+AGG | - | chr2_1:28167187-28167206 | None:intergenic | 60.0% | |
| TTTCGGGGTGGGAATGAGCC+GGG | + | chr2_1:28170307-28170326 | Msa0203740:intron | 60.0% | |
| ! | GGCTGAGCCGGGCTTTTAGT+AGG | + | chr2_1:28170952-28170971 | Msa0203740:intron | 60.0% |
| GGCTCGGCCTACTAAAAGCC+CGG | - | chr2_1:28170962-28170981 | None:intergenic | 60.0% | |
| GGACGCCTACCTGGTGACCA+TGG | + | chr2_1:28167151-28167170 | Msa0203740:CDS | 65.0% | |
| TTGGGTCGGGCCAGCCAGTT+AGG | + | chr2_1:28169963-28169982 | Msa0203740:intron | 65.0% | |
| GGGCCAGCCAGTTAGGCTTG+CGG | + | chr2_1:28169970-28169989 | Msa0203740:intron | 65.0% | |
| GGCCAGCCAGTTAGGCTTGC+GGG | + | chr2_1:28169971-28169990 | Msa0203740:intron | 65.0% | |
| AGCCCGCAAGCCTAACTGGC+TGG | - | chr2_1:28169976-28169995 | None:intergenic | 65.0% | |
| GGCAAGCCCGCAAGCCTAAC+TGG | - | chr2_1:28169980-28169999 | None:intergenic | 65.0% | |
| ATAGGCCAAGCCGCCCGTCT+GGG | - | chr2_1:28170991-28171010 | None:intergenic | 65.0% | |
| AATAGGCCAAGCCGCCCGTC+TGG | - | chr2_1:28170992-28171011 | None:intergenic | 65.0% | |
| GGCTATACAACGCGACGGGC+CGG | - | chr2_1:28171075-28171094 | None:intergenic | 65.0% | |
| GATGTTCCACCGGGTCAGGG+CGG | + | chr2_1:28171153-28171172 | Msa0203740:intron | 65.0% | |
| ATGTTCCACCGGGTCAGGGC+GGG | + | chr2_1:28171154-28171173 | Msa0203740:intron | 65.0% | |
| ATGTGCCGGACCGATCGGGC+CGG | + | chr2_1:28169838-28169857 | Msa0203740:intron | 70.0% | |
| !! | ATGCAAAGCCCGGCTCGGCC+CGG | - | chr2_1:28170328-28170347 | None:intergenic | 70.0% |
| GCCGAGCCATAGGCCCCAGA+CGG | + | chr2_1:28170974-28170993 | Msa0203740:intron | 70.0% | |
| ! | CCCGTCTGGGGCCTATGGCT+CGG | - | chr2_1:28170978-28170997 | None:intergenic | 70.0% |
| CCGAGCCATAGGCCCCAGAC+GGG | + | chr2_1:28170975-28170994 | Msa0203740:intron | 70.0% | |
| AGCCATAGGCCCCAGACGGG+CGG | + | chr2_1:28170978-28170997 | Msa0203740:intron | 70.0% | |
| TAGGCCAAGCCGCCCGTCTG+GGG | - | chr2_1:28170990-28171009 | None:intergenic | 70.0% | |
| CGACCTAACCCGCCCTGACC+CGG | - | chr2_1:28171165-28171184 | None:intergenic | 70.0% | |
| !! | CAGGGCGGGTTAGGTCGAGC+CGG | + | chr2_1:28171168-28171187 | Msa0203740:intron | 70.0% |
| AGGGTCCGGCCCGATCGGTC+CGG | - | chr2_1:28169846-28169865 | None:intergenic | 75.0% | |
| GGTCGAGGGTCCGGCCCGAT+CGG | - | chr2_1:28169851-28169870 | None:intergenic | 75.0% | |
| GGGAATGAGCCGGGCCGAGC+CGG | + | chr2_1:28170316-28170335 | Msa0203740:intron | 75.0% | |
| GGAATGAGCCGGGCCGAGCC+GGG | + | chr2_1:28170317-28170336 | Msa0203740:intron | 75.0% | |
| ! | AGCCGCCCGTCTGGGGCCTA+TGG | - | chr2_1:28170983-28171002 | None:intergenic | 75.0% |
| TAGGCCCCAGACGGGCGGCT+TGG | + | chr2_1:28170983-28171002 | Msa0203740:intron | 75.0% | |
| CCTAACCCGCCCTGACCCGG+TGG | - | chr2_1:28171162-28171181 | None:intergenic | 75.0% | |
| ! | CCACCGGGTCAGGGCGGGTT+AGG | + | chr2_1:28171159-28171178 | Msa0203740:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 28166732 | 28172747 | 28166732 | ID=Msa0203740;Name=Msa0203740 |
| chr2_1 | mRNA | 28166732 | 28172747 | 28166732 | ID=Msa0203740-mRNA-1;Parent=Msa0203740;Name=Msa0203740-mRNA-1;_AED=0.04;_eAED=0.04;_QI=50|1|1|1|1|1|5|65|523 |
| chr2_1 | exon | 28166732 | 28167240 | 28166732 | ID=Msa0203740-mRNA-1:exon:10257;Parent=Msa0203740-mRNA-1 |
| chr2_1 | exon | 28167696 | 28167936 | 28167696 | ID=Msa0203740-mRNA-1:exon:10258;Parent=Msa0203740-mRNA-1 |
| chr2_1 | exon | 28168302 | 28168480 | 28168302 | ID=Msa0203740-mRNA-1:exon:10259;Parent=Msa0203740-mRNA-1 |
| chr2_1 | exon | 28169061 | 28169410 | 28169061 | ID=Msa0203740-mRNA-1:exon:10260;Parent=Msa0203740-mRNA-1 |
| chr2_1 | exon | 28172340 | 28172747 | 28172340 | ID=Msa0203740-mRNA-1:exon:10261;Parent=Msa0203740-mRNA-1 |
| chr2_1 | five_prime_UTR | 28166732 | 28166781 | 28166732 | ID=Msa0203740-mRNA-1:five_prime_utr;Parent=Msa0203740-mRNA-1 |
| chr2_1 | CDS | 28166782 | 28167240 | 28166782 | ID=Msa0203740-mRNA-1:cds;Parent=Msa0203740-mRNA-1 |
| chr2_1 | CDS | 28167696 | 28167936 | 28167696 | ID=Msa0203740-mRNA-1:cds;Parent=Msa0203740-mRNA-1 |
| chr2_1 | CDS | 28168302 | 28168480 | 28168302 | ID=Msa0203740-mRNA-1:cds;Parent=Msa0203740-mRNA-1 |
| chr2_1 | CDS | 28169061 | 28169410 | 28169061 | ID=Msa0203740-mRNA-1:cds;Parent=Msa0203740-mRNA-1 |
| chr2_1 | CDS | 28172340 | 28172682 | 28172340 | ID=Msa0203740-mRNA-1:cds;Parent=Msa0203740-mRNA-1 |
| chr2_1 | three_prime_UTR | 28172683 | 28172747 | 28172683 | ID=Msa0203740-mRNA-1:three_prime_utr;Parent=Msa0203740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
