Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289270 | KEH38164.1 | 90.345 | 435 | 39 | 2 | 14 | 448 | 1 | 432 | 0.0 | 790 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289270 | sp|Q9C6A1|MTEFE_ARATH | 48.869 | 442 | 222 | 2 | 6 | 447 | 7 | 444 | 7.30e-144 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0289270 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0289270 | Msa0327130 | 0.835402 | 1.713089e-56 | -8.615850e-47 |
| Msa0289270 | Msa1410120 | 0.997329 | 1.247711e-240 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289270 | MtrunA17_Chr2g0308761 | 89.885 | 435 | 41 | 2 | 14 | 448 | 1 | 432 | 0.0 | 787 |
| Msa0289270 | MtrunA17_Chr2g0308431 | 92.308 | 91 | 5 | 1 | 334 | 424 | 1 | 89 | 5.47e-52 | 174 |
| Msa0289270 | MtrunA17_Chr4g0020831 | 92.308 | 91 | 5 | 1 | 334 | 424 | 1 | 89 | 3.16e-51 | 172 |
| Msa0289270 | MtrunA17_Chr2g0308421 | 84.615 | 52 | 7 | 1 | 527 | 577 | 1 | 52 | 1.11e-19 | 82.8 |
| Msa0289270 | MtrunA17_Chr1g0160961 | 63.953 | 86 | 28 | 3 | 518 | 602 | 655 | 738 | 1.28e-19 | 94.0 |
| Msa0289270 | MtrunA17_Chr5g0419891 | 53.922 | 102 | 29 | 4 | 517 | 602 | 515 | 614 | 1.66e-16 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289270 | AT1G74120.1 | 48.869 | 442 | 222 | 2 | 6 | 447 | 7 | 444 | 7.42e-145 | 427 |
| Msa0289270 | AT5G54180.1 | 29.279 | 222 | 151 | 5 | 153 | 370 | 253 | 472 | 1.49e-15 | 80.1 |
| Msa0289270 | AT1G62010.1 | 26.562 | 192 | 122 | 5 | 211 | 399 | 213 | 388 | 4.64e-11 | 65.9 |
Find 144 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGCTTGGATTTGAATTT+TGG | 0.098657 | 2_3:+35472253 | None:intergenic |
| AACCCCAATTTCTACATAAT+TGG | 0.109235 | 2_3:-35472288 | Msa0289270:CDS |
| ATTCCCAATTATGTAGAAAT+TGG | 0.124209 | 2_3:+35472284 | None:intergenic |
| ACAATTGTACAGAGATTTAT+TGG | 0.191689 | 2_3:-35469477 | Msa0289270:CDS |
| CCGAGCTTTGGAACAAATTC+TGG | 0.197617 | 2_3:+35468735 | None:intergenic |
| TAGATTGTTTCCTAGGGTTT+TGG | 0.199228 | 2_3:-35471990 | Msa0289270:CDS |
| AATCTTGAATAAGGGAAATT+AGG | 0.210110 | 2_3:+35472326 | None:intergenic |
| AAATTTCAAGTGGGTTTAAA+TGG | 0.215029 | 2_3:+35472179 | None:intergenic |
| CAGAAAGGCAATCTTGAATA+AGG | 0.235623 | 2_3:+35472317 | None:intergenic |
| TGTTAGGGATCCAAGGGTTT+TGG | 0.241406 | 2_3:-35471882 | Msa0289270:CDS |
| ATTCATGAGTTGAGGAGTTT+GGG | 0.255104 | 2_3:-35471935 | Msa0289270:CDS |
| ACTTGAGTTGATCAAAATAT+TGG | 0.275160 | 2_3:-35468712 | Msa0289270:CDS |
| ATTTCTACATAATTGGGAAT+TGG | 0.292126 | 2_3:-35472281 | Msa0289270:CDS |
| TCTTGAAAGGGTGACATTAC+AGG | 0.292157 | 2_3:-35468784 | Msa0289270:CDS |
| ACAGTAGAGTTGAGGCCATT+AGG | 0.295558 | 2_3:-35470894 | Msa0289270:CDS |
| TTGATCAAAATATTGGCATT+TGG | 0.301587 | 2_3:-35468705 | Msa0289270:CDS |
| TTCCCAATTATGTAGAAATT+GGG | 0.304182 | 2_3:+35472285 | None:intergenic |
| CAACACCATATTTCATCCTT+TGG | 0.306291 | 2_3:+35471615 | None:intergenic |
| AGGTCAGGGCGGAGGTTGTT+AGG | 0.309694 | 2_3:-35471898 | Msa0289270:CDS |
| TTAATCCAAAGGATGAAATA+TGG | 0.315058 | 2_3:-35471620 | Msa0289270:CDS |
| TTGAAAGGAAAAGGTGCAAT+TGG | 0.315697 | 2_3:-35471512 | Msa0289270:CDS |
| GATTCATGAGTTGAGGAGTT+TGG | 0.321130 | 2_3:-35471936 | Msa0289270:CDS |
| CAGTAGAGTTGAGGCCATTA+GGG | 0.323647 | 2_3:-35470893 | Msa0289270:CDS |
| TGATCAAAATATTGGCATTT+GGG | 0.327176 | 2_3:-35468704 | Msa0289270:CDS |
| TTTCTACATAATTGGGAATT+GGG | 0.332347 | 2_3:-35472280 | Msa0289270:CDS |
| GAAGAACATGAAGGCTTTCA+TGG | 0.341403 | 2_3:-35471297 | Msa0289270:CDS |
| AACATGCGAATTCACAGATT+TGG | 0.348169 | 2_3:+35471022 | None:intergenic |
| AAGTGGTTCTTACAAGAATA+AGG | 0.352405 | 2_3:+35472566 | None:intergenic |
| GGGTTGTTAGATTGTTTCCT+AGG | 0.353615 | 2_3:-35471997 | Msa0289270:CDS |
| CATGAAGTTCCTTCATACTT+AGG | 0.364333 | 2_3:-35471584 | Msa0289270:CDS |
| GTTGGAGCGGAAAACTTGTT+TGG | 0.369327 | 2_3:-35469292 | Msa0289270:CDS |
| AAAATCTGTAAAACTCTTGA+AGG | 0.378482 | 2_3:-35469427 | Msa0289270:intron |
| GCAGTAGCTCATGGAATGTT+TGG | 0.379837 | 2_3:-35470918 | Msa0289270:CDS |
| AGTTACAACATTCATTAGTT+GGG | 0.385822 | 2_3:-35470870 | Msa0289270:CDS |
| ATCAACTCAAGTCCGAGCTT+TGG | 0.389686 | 2_3:+35468723 | None:intergenic |
| ACCCCAATTTCTACATAATT+GGG | 0.391543 | 2_3:-35472287 | Msa0289270:CDS |
| CACAATCTTTCCAATGGGGT+TGG | 0.394153 | 2_3:-35472620 | None:intergenic |
| AAGGTTGATTGCTTACGGTT+TGG | 0.397737 | 2_3:-35471669 | Msa0289270:CDS |
| GATCCGTAGGGATGCTTTGA+AGG | 0.398149 | 2_3:-35471708 | Msa0289270:CDS |
| TGTTTGGAGTTTATAAAGAA+TGG | 0.398840 | 2_3:-35469276 | Msa0289270:CDS |
| GGTGCAATTGGGTTTGAAGT+TGG | 0.399622 | 2_3:-35471500 | Msa0289270:CDS |
| GAGTTACAACATTCATTAGT+TGG | 0.403178 | 2_3:-35470871 | Msa0289270:CDS |
| TTCCTAAGGATGAAATTGAT+AGG | 0.405215 | 2_3:-35472018 | Msa0289270:CDS |
| ACAAGTTGGCGATCATCAAC+GGG | 0.417533 | 2_3:+35472221 | None:intergenic |
| ACAATCTTTCCAATGGGGTT+GGG | 0.423298 | 2_3:-35472619 | None:intergenic |
| GTAAGCATCCAGCTGGACTT+TGG | 0.424175 | 2_3:-35471364 | Msa0289270:CDS |
| TGAAAGGAAAAGGTGCAATT+GGG | 0.424464 | 2_3:-35471511 | Msa0289270:CDS |
| GCTAATCTCTTCCAATCCTT+CGG | 0.426075 | 2_3:-35472469 | Msa0289270:CDS |
| CATGTTCTTCACATCTTGAC+CGG | 0.428680 | 2_3:+35471310 | None:intergenic |
| TGTTGCAGAGTTTGAAATGC+AGG | 0.431814 | 2_3:-35471823 | Msa0289270:CDS |
| TGGGTTTGAAGTTGGATTGA+AGG | 0.437194 | 2_3:-35471492 | Msa0289270:CDS |
| CGGGGAAGCATTAGAAAGCT+TGG | 0.440265 | 2_3:+35472240 | None:intergenic |
| CCAGAATTTGTTCCAAAGCT+CGG | 0.441601 | 2_3:-35468735 | Msa0289270:CDS |
| TTCACATCTTGACCGGTTTG+AGG | 0.446780 | 2_3:+35471317 | None:intergenic |
| CAGCCGAGAGGTCAGGGCGG+AGG | 0.450679 | 2_3:-35471906 | Msa0289270:CDS |
| CAATTGTACAGAGATTTATT+GGG | 0.454992 | 2_3:-35469476 | Msa0289270:CDS |
| GAACCAAGGTTGATTGCTTA+CGG | 0.455676 | 2_3:-35471674 | Msa0289270:CDS |
| TACTCAATCACATTGTATCT+AGG | 0.456654 | 2_3:+35471536 | None:intergenic |
| TGAATGTTGTAACTCCCTAA+TGG | 0.462308 | 2_3:+35470879 | None:intergenic |
| GTTGTTATTAGTTGAAGAAG+TGG | 0.465877 | 2_3:+35472549 | None:intergenic |
| TCAAGATTGCCTTTCTGTGT+TGG | 0.468440 | 2_3:-35472311 | Msa0289270:CDS |
| TATGGAATTTGGGGTTCCTA+AGG | 0.471062 | 2_3:-35472032 | Msa0289270:CDS |
| ATCTCCATTCCCAAAACCCT+TGG | 0.472530 | 2_3:+35471872 | None:intergenic |
| GGTTAAGGTCTTGGCTCAGT+TGG | 0.473212 | 2_3:-35469310 | Msa0289270:intron |
| CTCCGCCCTGACCTCTCGGC+TGG | 0.473380 | 2_3:+35471907 | None:intergenic |
| GTGGTCACGGTTTGATCCGT+AGG | 0.474464 | 2_3:-35471721 | Msa0289270:CDS |
| GTTTGGAGTTTATAAAGAAT+GGG | 0.474872 | 2_3:-35469275 | Msa0289270:intron |
| ACCCTATCAATTTCATCCTT+AGG | 0.474968 | 2_3:+35472016 | None:intergenic |
| ATTGAGTATTTGAAAGGAAA+AGG | 0.475963 | 2_3:-35471521 | Msa0289270:CDS |
| ATTTCCCATTGCAGTTGTCA+TGG | 0.478760 | 2_3:-35472089 | Msa0289270:CDS |
| TTTCCCATTGCAGTTGTCAT+GGG | 0.479957 | 2_3:-35472088 | Msa0289270:CDS |
| GGTCAGGGCGGAGGTTGTTA+GGG | 0.481020 | 2_3:-35471897 | Msa0289270:CDS |
| GATCGGTATTGAAGAGGAAG+TGG | 0.483347 | 2_3:+35472407 | None:intergenic |
| GTTGATTGCTTACGGTTTGG+AGG | 0.485609 | 2_3:-35471666 | Msa0289270:CDS |
| AGAAAGGCAATCTTGAATAA+GGG | 0.487800 | 2_3:+35472318 | None:intergenic |
| AGGAAGGGAAACCGAAGGAT+TGG | 0.491372 | 2_3:+35472458 | None:intergenic |
| TGGGATTTGGAATTGAGGAT+AGG | 0.491709 | 2_3:-35471970 | Msa0289270:CDS |
| GGTAAGAGATTGACGAAGGT+GGG | 0.494203 | 2_3:+35472381 | None:intergenic |
| GGTTGTTAGATTGTTTCCTA+GGG | 0.496449 | 2_3:-35471996 | Msa0289270:CDS |
| AATGTGATTGAGTATTTGAA+AGG | 0.505696 | 2_3:-35471527 | Msa0289270:CDS |
| TTGTAAAATCTAAGCCTAGT+TGG | 0.506128 | 2_3:+35471458 | None:intergenic |
| AGATGTAGGTGGATTAGAAA+TGG | 0.507251 | 2_3:+35472516 | None:intergenic |
| TGCTTTCAGAGTTCTTGAAA+GGG | 0.508227 | 2_3:-35468796 | Msa0289270:intron |
| CGGAGGTTGTTAGGGATCCA+AGG | 0.508723 | 2_3:-35471889 | Msa0289270:CDS |
| TGGTAAGAGATTGACGAAGG+TGG | 0.510918 | 2_3:+35472380 | None:intergenic |
| ATGCTTTCAGAGTTCTTGAA+AGG | 0.511397 | 2_3:-35468797 | Msa0289270:intron |
| CCACATAAGTTTCCTCAAAC+CGG | 0.511821 | 2_3:-35471329 | Msa0289270:CDS |
| AACAAGTTGGCGATCATCAA+CGG | 0.518122 | 2_3:+35472220 | None:intergenic |
| AATCCGTGGCACAGGTCCAT+TGG | 0.518651 | 2_3:+35468758 | None:intergenic |
| TTCATGAGTTGAGGAGTTTG+GGG | 0.519712 | 2_3:-35471934 | Msa0289270:CDS |
| TGTAGGTGGATTAGAAATGG+TGG | 0.521617 | 2_3:+35472519 | None:intergenic |
| TTTGAGGAAACTTATGTGGT+TGG | 0.523505 | 2_3:+35471333 | None:intergenic |
| AACAGCTTCCAAAGTCCAGC+TGG | 0.524566 | 2_3:+35471356 | None:intergenic |
| AATTCTGGAATCCGTGGCAC+AGG | 0.526371 | 2_3:+35468750 | None:intergenic |
| AAATTCGGAAGAGAAGAGGA+AGG | 0.533269 | 2_3:+35472442 | None:intergenic |
| GTTACAACATTCATTAGTTG+GGG | 0.534750 | 2_3:-35470869 | Msa0289270:CDS |
| TCCCAATTATGTAGAAATTG+GGG | 0.539066 | 2_3:+35472286 | None:intergenic |
| TCCTAAGGATGAAATTGATA+GGG | 0.543797 | 2_3:-35472017 | Msa0289270:CDS |
| GTTAAAAGTAAGCATCCAGC+TGG | 0.546625 | 2_3:-35471371 | Msa0289270:CDS |
| CCGGTTTGAGGAAACTTATG+TGG | 0.548415 | 2_3:+35471329 | None:intergenic |
| TTGACGAAGGTGGGATGGAT+CGG | 0.551796 | 2_3:+35472390 | None:intergenic |
| GTGGATTGTTTGTGTGGTCA+CGG | 0.552758 | 2_3:-35471734 | Msa0289270:CDS |
| ATGGTGGAACCCAACCCCAT+TGG | 0.554824 | 2_3:+35472610 | None:intergenic |
| CCACCACAAGCAGTAGCTCA+TGG | 0.559836 | 2_3:-35470927 | Msa0289270:CDS |
| TGTTGATACTCAACAGTGTA+TGG | 0.561591 | 2_3:-35470842 | Msa0289270:intron |
| ATTCCAAATCCCAAAACCCT+AGG | 0.561947 | 2_3:+35471980 | None:intergenic |
| GTTGCAGAGTTTGAAATGCA+GGG | 0.562878 | 2_3:-35471822 | Msa0289270:CDS |
| ATTGGGGTTCCAACACAGAA+AGG | 0.562957 | 2_3:+35472302 | None:intergenic |
| AGAGATTGACGAAGGTGGGA+TGG | 0.563472 | 2_3:+35472385 | None:intergenic |
| CAACCTCCGCCCTGACCTCT+CGG | 0.563699 | 2_3:+35471903 | None:intergenic |
| CCATGAGCTACTGCTTGTGG+TGG | 0.567964 | 2_3:+35470927 | None:intergenic |
| GAGGAAATTCGGAAGAGAAG+AGG | 0.568672 | 2_3:+35472438 | None:intergenic |
| TTGAGAGTGGATTGTTTGTG+TGG | 0.573095 | 2_3:-35471740 | Msa0289270:CDS |
| TTCCCATTGCAGTTGTCATG+GGG | 0.575497 | 2_3:-35472087 | Msa0289270:CDS |
| AAATTCACACCTAAGTATGA+AGG | 0.579741 | 2_3:+35471575 | None:intergenic |
| TGCTTTGAAGGTGTTGTGGA+AGG | 0.580553 | 2_3:-35471696 | Msa0289270:CDS |
| AGCTGTTGATTCATGAGTTG+AGG | 0.589517 | 2_3:-35471943 | Msa0289270:CDS |
| AATTCGGAAGAGAAGAGGAA+GGG | 0.592899 | 2_3:+35472443 | None:intergenic |
| GGGATGGATCGGTATTGAAG+AGG | 0.598546 | 2_3:+35472401 | None:intergenic |
| GGAGGTTGTTAGGGATCCAA+GGG | 0.599772 | 2_3:-35471888 | Msa0289270:CDS |
| GGGTGGTAAGAGATTGACGA+AGG | 0.601379 | 2_3:+35472377 | None:intergenic |
| AGGTCTTGGCTCAGTTGGAG+CGG | 0.602503 | 2_3:-35469305 | Msa0289270:CDS |
| TGTAGAACAACGCAACAAGT+TGG | 0.609072 | 2_3:+35472207 | None:intergenic |
| AAACCGTAAGCAATCAACCT+TGG | 0.613186 | 2_3:+35471671 | None:intergenic |
| GGGATGCTTTGAAGGTGTTG+TGG | 0.613256 | 2_3:-35471700 | Msa0289270:CDS |
| TGTTTGGAACAGTAGAGTTG+AGG | 0.615894 | 2_3:-35470902 | Msa0289270:CDS |
| AAGCCAATGGACCTGTGCCA+CGG | 0.617584 | 2_3:-35468761 | Msa0289270:CDS |
| GGAACAAATTCTGGAATCCG+TGG | 0.622732 | 2_3:+35468744 | None:intergenic |
| ACTTTACGGGAAATTTCAAG+TGG | 0.628377 | 2_3:+35472169 | None:intergenic |
| TCCCATTGCAGTTGTCATGG+GGG | 0.632407 | 2_3:-35472086 | Msa0289270:CDS |
| ATTCCATGAGCTACTGCTTG+TGG | 0.636151 | 2_3:+35470924 | None:intergenic |
| TGGTCACGGTTTGATCCGTA+GGG | 0.637002 | 2_3:-35471720 | Msa0289270:CDS |
| CTTTACGGGAAATTTCAAGT+GGG | 0.640015 | 2_3:+35472170 | None:intergenic |
| AGGACATCATCAAACCAACT+AGG | 0.642474 | 2_3:-35471472 | Msa0289270:CDS |
| GTGACATTACAGGAAGCCAA+TGG | 0.643356 | 2_3:-35468774 | Msa0289270:CDS |
| AGAAGAGGAAGGGAAACCGA+AGG | 0.647325 | 2_3:+35472453 | None:intergenic |
| ACACCTTCAAAGCATCCCTA+CGG | 0.648597 | 2_3:+35471705 | None:intergenic |
| TCAAGATGTGAAGAACATGA+AGG | 0.654568 | 2_3:-35471306 | Msa0289270:CDS |
| TTTCTGTAATGAGATGTAGG+TGG | 0.659285 | 2_3:+35472505 | None:intergenic |
| GCAGGGAGGCAATTAAAGAG+AGG | 0.662756 | 2_3:-35471805 | Msa0289270:CDS |
| TTCCAGCCGAGAGGTCAGGG+CGG | 0.702811 | 2_3:-35471909 | Msa0289270:CDS |
| AGGTGTTGTGGAAGGAACCA+AGG | 0.704640 | 2_3:-35471688 | Msa0289270:CDS |
| GCAGAGTTTGAAATGCAGGG+AGG | 0.745889 | 2_3:-35471819 | Msa0289270:CDS |
| CAAGTTGGCGATCATCAACG+GGG | 0.759642 | 2_3:+35472222 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTGATTTAAAATTAATTTT+GGG | + | chr2_3:35470224-35470243 | None:intergenic | 10.0% |
| !!! | TTGTGATTTAAAATTAATTT+TGG | + | chr2_3:35470225-35470244 | None:intergenic | 10.0% |
| !!! | AAATTAATTTTAAATCACAA+AGG | - | chr2_3:35470225-35470244 | Msa0289270:intron | 10.0% |
| !!! | AATTAATTTTAAATCACAAA+GGG | - | chr2_3:35470226-35470245 | Msa0289270:intron | 10.0% |
| !!! | AAAAATATTTTAACAGAAAA+AGG | + | chr2_3:35471911-35471930 | None:intergenic | 10.0% |
| !!! | TTAATTTTCTTATGGAATTT+GGG | - | chr2_3:35469242-35469261 | Msa0289270:intron | 15.0% |
| !! | AAGAATTATAAAAATGTTAG+TGG | - | chr2_3:35470323-35470342 | Msa0289270:intron | 15.0% |
| !!! | TTGAAACAGTTTAATTTTTA+GGG | + | chr2_3:35470858-35470877 | None:intergenic | 15.0% |
| !! | TAAAAATTAAACTGTTTCAA+GGG | - | chr2_3:35470858-35470877 | Msa0289270:CDS | 15.0% |
| !! | TATAAAAAAATCTTAAAGTG+AGG | + | chr2_3:35471176-35471195 | None:intergenic | 15.0% |
| !! | AACATATAATATGAACTTAA+GGG | + | chr2_3:35471315-35471334 | None:intergenic | 15.0% |
| !!! | GTTAATTTTCTTATGGAATT+TGG | - | chr2_3:35469241-35469260 | Msa0289270:intron | 20.0% |
| !!! | TAATTTTCTTATGGAATTTG+GGG | - | chr2_3:35469243-35469262 | Msa0289270:intron | 20.0% |
| !! | CAGAATGTGAAAAAATATAT+GGG | - | chr2_3:35469869-35469888 | Msa0289270:intron | 20.0% |
| !!! | AAAAATATATGGGAGATTTT+CGG | - | chr2_3:35469879-35469898 | Msa0289270:intron | 20.0% |
| !!! | CTTGAAACAGTTTAATTTTT+AGG | + | chr2_3:35470859-35470878 | None:intergenic | 20.0% |
| !! | CTAAAAATTAAACTGTTTCA+AGG | - | chr2_3:35470857-35470876 | Msa0289270:CDS | 20.0% |
| !! | GAACATATAATATGAACTTA+AGG | + | chr2_3:35471316-35471335 | None:intergenic | 20.0% |
| !!! | ATGTTTTTCTCGTAAAATTT+GGG | + | chr2_3:35471584-35471603 | None:intergenic | 20.0% |
| !!! | AATGTTTTTCTCGTAAAATT+TGG | + | chr2_3:35471585-35471604 | None:intergenic | 20.0% |
| !!! | ACTAATGTTTGATATGATTT+TGG | - | chr2_3:35471953-35471972 | Msa0289270:CDS | 20.0% |
| !!! | TTGATATAAATTTCAAGTCA+TGG | + | chr2_3:35472045-35472064 | None:intergenic | 20.0% |
| !!! | ACATGTATCTAAAATTGTTA+GGG | - | chr2_3:35472406-35472425 | Msa0289270:CDS | 20.0% |
| ! | AATCTTGAATAAGGGAAATT+AGG | + | chr2_3:35468961-35468980 | None:intergenic | 25.0% |
| ! | TTCCCAATTATGTAGAAATT+GGG | + | chr2_3:35469002-35469021 | None:intergenic | 25.0% |
| ! | ATTCCCAATTATGTAGAAAT+TGG | + | chr2_3:35469003-35469022 | None:intergenic | 25.0% |
| ! | ATTTCTACATAATTGGGAAT+TGG | - | chr2_3:35469003-35469022 | Msa0289270:intron | 25.0% |
| ! | TTTCTACATAATTGGGAATT+GGG | - | chr2_3:35469004-35469023 | Msa0289270:intron | 25.0% |
| !! | AAATTTCAAGTGGGTTTAAA+TGG | + | chr2_3:35469108-35469127 | None:intergenic | 25.0% |
| !!! | TTTCTGATGATGTTTTGATA+AGG | - | chr2_3:35469161-35469180 | Msa0289270:intron | 25.0% |
| !!! | TTCTGATGATGTTTTGATAA+GGG | - | chr2_3:35469162-35469181 | Msa0289270:intron | 25.0% |
| !! | AGATTGAGTTTTTAATCCAA+AGG | - | chr2_3:35469653-35469672 | Msa0289270:intron | 25.0% |
| ! | TTAATCCAAAGGATGAAATA+TGG | - | chr2_3:35469664-35469683 | Msa0289270:intron | 25.0% |
| ! | AATGTGATTGAGTATTTGAA+AGG | - | chr2_3:35469757-35469776 | Msa0289270:intron | 25.0% |
| ! | ATTGAGTATTTGAAAGGAAA+AGG | - | chr2_3:35469763-35469782 | Msa0289270:intron | 25.0% |
| !!! | ATTTTTTCACATTCTGGATA+AGG | + | chr2_3:35469865-35469884 | None:intergenic | 25.0% |
| !!! | CCATATATTTTTTCACATTC+TGG | + | chr2_3:35469871-35469890 | None:intergenic | 25.0% |
| ! | CCAGAATGTGAAAAAATATA+TGG | - | chr2_3:35469868-35469887 | Msa0289270:intron | 25.0% |
| !! | AAAATATATGGGAGATTTTC+GGG | - | chr2_3:35469880-35469899 | Msa0289270:intron | 25.0% |
| ! | AGTTACAACATTCATTAGTT+GGG | - | chr2_3:35470414-35470433 | Msa0289270:intron | 25.0% |
| !! | AAAAGTGCAAAAAATGAAGA+AGG | + | chr2_3:35470472-35470491 | None:intergenic | 25.0% |
| ! | AATACGTAAAAGACAAAACA+GGG | + | chr2_3:35470620-35470639 | None:intergenic | 25.0% |
| ! | AAATACGTAAAAGACAAAAC+AGG | + | chr2_3:35470621-35470640 | None:intergenic | 25.0% |
| !!! | ACCACTATATTGTTTTAATG+TGG | - | chr2_3:35470825-35470844 | Msa0289270:intron | 25.0% |
| ! | TCCACATTAAAACAATATAG+TGG | + | chr2_3:35470829-35470848 | None:intergenic | 25.0% |
| ! | TACAGAGATAACTCATATTA+GGG | + | chr2_3:35471076-35471095 | None:intergenic | 25.0% |
| ! | TTACAGAGATAACTCATATT+AGG | + | chr2_3:35471077-35471096 | None:intergenic | 25.0% |
| ! | AAATTCTGAACAATGCATAT+AGG | + | chr2_3:35471282-35471301 | None:intergenic | 25.0% |
| !! | ATGCATTGTTCAGAATTTTA+TGG | - | chr2_3:35471284-35471303 | Msa0289270:intron | 25.0% |
| ! | ACAATTGTACAGAGATTTAT+TGG | - | chr2_3:35471807-35471826 | Msa0289270:CDS | 25.0% |
| ! | CAATTGTACAGAGATTTATT+GGG | - | chr2_3:35471808-35471827 | Msa0289270:CDS | 25.0% |
| !! | GAGTTTTACAGATTTTATTC+TGG | + | chr2_3:35471853-35471872 | None:intergenic | 25.0% |
| ! | AAAATCTGTAAAACTCTTGA+AGG | - | chr2_3:35471857-35471876 | Msa0289270:CDS | 25.0% |
| !!! | GTTTGATATGATTTTGGTTA+AGG | - | chr2_3:35471959-35471978 | Msa0289270:CDS | 25.0% |
| !! | TGTTTGGAGTTTATAAAGAA+TGG | - | chr2_3:35472008-35472027 | Msa0289270:CDS | 25.0% |
| !! | GTTTGGAGTTTATAAAGAAT+GGG | - | chr2_3:35472009-35472028 | Msa0289270:CDS | 25.0% |
| !!! | TCGATAAGTTTTTCAAATGA+AGG | + | chr2_3:35472237-35472256 | None:intergenic | 25.0% |
| !! | CTAACAATTTTAGATACATG+TGG | + | chr2_3:35472407-35472426 | None:intergenic | 25.0% |
| !! | CACATGTATCTAAAATTGTT+AGG | - | chr2_3:35472405-35472424 | Msa0289270:CDS | 25.0% |
| !! | CATGTATCTAAAATTGTTAG+GGG | - | chr2_3:35472407-35472426 | Msa0289270:CDS | 25.0% |
| !! | ATGTATCTAAAATTGTTAGG+GGG | - | chr2_3:35472408-35472427 | Msa0289270:CDS | 25.0% |
| !!! | TATTGTAACTCTTTTTTCGT+TGG | - | chr2_3:35472437-35472456 | Msa0289270:CDS | 25.0% |
| !!! | ACTTGAGTTGATCAAAATAT+TGG | - | chr2_3:35472572-35472591 | Msa0289270:CDS | 25.0% |
| ! | TTGATCAAAATATTGGCATT+TGG | - | chr2_3:35472579-35472598 | Msa0289270:CDS | 25.0% |
| ! | TGATCAAAATATTGGCATTT+GGG | - | chr2_3:35472580-35472599 | Msa0289270:CDS | 25.0% |
| !!! | GTTGTTTCTTTTTCTGACTA+TGG | + | chr2_3:35468696-35468715 | None:intergenic | 30.0% |
| AAGTGGTTCTTACAAGAATA+AGG | + | chr2_3:35468721-35468740 | None:intergenic | 30.0% | |
| ! | GTTGTTATTAGTTGAAGAAG+TGG | + | chr2_3:35468738-35468757 | None:intergenic | 30.0% |
| ! | TGTTTTCTGTAATGAGATGT+AGG | + | chr2_3:35468785-35468804 | None:intergenic | 30.0% |
| !! | TGGAATTTTGAAGGAAAAGA+GGG | + | chr2_3:35468930-35468949 | None:intergenic | 30.0% |
| ! | GTTTTTCTGTGGAATTTTGA+AGG | + | chr2_3:35468939-35468958 | None:intergenic | 30.0% |
| AGAAAGGCAATCTTGAATAA+GGG | + | chr2_3:35468969-35468988 | None:intergenic | 30.0% | |
| AACCCCAATTTCTACATAAT+TGG | - | chr2_3:35468996-35469015 | Msa0289270:intron | 30.0% | |
| ACCCCAATTTCTACATAATT+GGG | - | chr2_3:35468997-35469016 | Msa0289270:intron | 30.0% | |
| TCCCAATTATGTAGAAATTG+GGG | + | chr2_3:35469001-35469020 | None:intergenic | 30.0% | |
| ! | GAAAGCTTGGATTTGAATTT+TGG | + | chr2_3:35469034-35469053 | None:intergenic | 30.0% |
| CCTAAAAATCTCAACTTTAC+GGG | + | chr2_3:35469131-35469150 | None:intergenic | 30.0% | |
| CCCTAAAAATCTCAACTTTA+CGG | + | chr2_3:35469132-35469151 | None:intergenic | 30.0% | |
| ! | CCGTAAAGTTGAGATTTTTA+GGG | - | chr2_3:35469129-35469148 | Msa0289270:intron | 30.0% |
| !! | CGTAAAGTTGAGATTTTTAG+GGG | - | chr2_3:35469130-35469149 | Msa0289270:intron | 30.0% |
| !!! | TGATGTTTTGATAAGGGTTT+TGG | - | chr2_3:35469168-35469187 | Msa0289270:intron | 30.0% |
| !!! | TGGTGTCGTTAATTTTCTTA+TGG | - | chr2_3:35469234-35469253 | Msa0289270:intron | 30.0% |
| TTCCTAAGGATGAAATTGAT+AGG | - | chr2_3:35469266-35469285 | Msa0289270:intron | 30.0% | |
| TCCTAAGGATGAAATTGATA+GGG | - | chr2_3:35469267-35469286 | Msa0289270:intron | 30.0% | |
| ! | GCAATTAAAGAGAGGATTTT+TGG | - | chr2_3:35469487-35469506 | Msa0289270:CDS | 30.0% |
| AAATTCACACCTAAGTATGA+AGG | + | chr2_3:35469712-35469731 | None:intergenic | 30.0% | |
| TACTCAATCACATTGTATCT+AGG | + | chr2_3:35469751-35469770 | None:intergenic | 30.0% | |
| TTGTAAAATCTAAGCCTAGT+TGG | + | chr2_3:35469829-35469848 | None:intergenic | 30.0% | |
| GATCTATGAATACTGTTAGT+TGG | - | chr2_3:35470030-35470049 | Msa0289270:intron | 30.0% | |
| AATACTGTTAGTTGGATGAA+TGG | - | chr2_3:35470038-35470057 | Msa0289270:intron | 30.0% | |
| !!! | TGCATAAACTTGTTTTGCAT+AGG | + | chr2_3:35470112-35470131 | None:intergenic | 30.0% |
| GAGTTACAACATTCATTAGT+TGG | - | chr2_3:35470413-35470432 | Msa0289270:intron | 30.0% | |
| GTTACAACATTCATTAGTTG+GGG | - | chr2_3:35470415-35470434 | Msa0289270:intron | 30.0% | |
| GCAAATGAATGAATTTGGAA+TGG | + | chr2_3:35470929-35470948 | None:intergenic | 30.0% | |
| ACTCATATTAGGGAAAAGAA+GGG | + | chr2_3:35471066-35471085 | None:intergenic | 30.0% | |
| AACTCATATTAGGGAAAAGA+AGG | + | chr2_3:35471067-35471086 | None:intergenic | 30.0% | |
| !! | TCTGCTATTTGATCATGTTT+TGG | + | chr2_3:35471463-35471482 | None:intergenic | 30.0% |
| TATTCTCTAATGATTGCAGA+TGG | - | chr2_3:35471688-35471707 | Msa0289270:CDS | 30.0% | |
| !!! | TATGATTTTGGTTAAGGTCT+TGG | - | chr2_3:35471965-35471984 | Msa0289270:CDS | 30.0% |
| GGAAGGAAAAAAAGTAAACT+CGG | - | chr2_3:35472099-35472118 | Msa0289270:CDS | 30.0% | |
| GAAGGAAAAAAAGTAAACTC+GGG | - | chr2_3:35472100-35472119 | Msa0289270:CDS | 30.0% | |
| CTAAACCTCTGCAATAAATT+TGG | + | chr2_3:35472324-35472343 | None:intergenic | 30.0% | |
| ! | GTTTCTTTTTCTGACTATGG+TGG | + | chr2_3:35468693-35468712 | None:intergenic | 35.0% |
| !! | AGATGTAGGTGGATTAGAAA+TGG | + | chr2_3:35468771-35468790 | None:intergenic | 35.0% |
| TTTCTGTAATGAGATGTAGG+TGG | + | chr2_3:35468782-35468801 | None:intergenic | 35.0% | |
| !! | TGGTTTTTGGAGAGGAAATT+CGG | + | chr2_3:35468860-35468879 | None:intergenic | 35.0% |
| ! | ATTGAAGAGGAAGTGGTTTT+TGG | + | chr2_3:35468873-35468892 | None:intergenic | 35.0% |
| !! | AATTTTGAAGGAAAAGAGGG+TGG | + | chr2_3:35468927-35468946 | None:intergenic | 35.0% |
| !! | GTGGAATTTTGAAGGAAAAG+AGG | + | chr2_3:35468931-35468950 | None:intergenic | 35.0% |
| ! | AGGGAAATTAGGTTTTTCTG+TGG | + | chr2_3:35468950-35468969 | None:intergenic | 35.0% |
| CAGAAAGGCAATCTTGAATA+AGG | + | chr2_3:35468970-35468989 | None:intergenic | 35.0% | |
| ! | CTTTACGGGAAATTTCAAGT+GGG | + | chr2_3:35469117-35469136 | None:intergenic | 35.0% |
| ACTTTACGGGAAATTTCAAG+TGG | + | chr2_3:35469118-35469137 | None:intergenic | 35.0% | |
| ! | CCCGTAAAGTTGAGATTTTT+AGG | - | chr2_3:35469128-35469147 | Msa0289270:intron | 35.0% |
| !! | GTTGAGATTTTTAGGGGTTT+AGG | - | chr2_3:35469136-35469155 | Msa0289270:intron | 35.0% |
| !!! | TGTTTTGATAAGGGTTTTGG+AGG | - | chr2_3:35469171-35469190 | Msa0289270:intron | 35.0% |
| ACCCTATCAATTTCATCCTT+AGG | + | chr2_3:35469271-35469290 | None:intergenic | 35.0% | |
| GGTTGTTAGATTGTTTCCTA+GGG | - | chr2_3:35469288-35469307 | Msa0289270:CDS | 35.0% | |
| ! | TAGATTGTTTCCTAGGGTTT+TGG | - | chr2_3:35469294-35469313 | Msa0289270:CDS | 35.0% |
| ! | AGATTGTTTCCTAGGGTTTT+GGG | - | chr2_3:35469295-35469314 | Msa0289270:CDS | 35.0% |
| ! | ATTCATGAGTTGAGGAGTTT+GGG | - | chr2_3:35469349-35469368 | Msa0289270:intron | 35.0% |
| !! | TAAAGAGAGGATTTTTGGAG+AGG | - | chr2_3:35469492-35469511 | Msa0289270:CDS | 35.0% |
| !! | AAAGAGAGGATTTTTGGAGA+GGG | - | chr2_3:35469493-35469512 | Msa0289270:CDS | 35.0% |
| !!! | TTTTGAAGTGAAGTTGAGAG+TGG | - | chr2_3:35469531-35469550 | Msa0289270:intron | 35.0% |
| CAACACCATATTTCATCCTT+TGG | + | chr2_3:35469672-35469691 | None:intergenic | 35.0% | |
| CATGAAGTTCCTTCATACTT+AGG | - | chr2_3:35469700-35469719 | Msa0289270:intron | 35.0% | |
| ! | TTGAAAGGAAAAGGTGCAAT+TGG | - | chr2_3:35469772-35469791 | Msa0289270:intron | 35.0% |
| ! | TGAAAGGAAAAGGTGCAATT+GGG | - | chr2_3:35469773-35469792 | Msa0289270:intron | 35.0% |
| TTTGAGGAAACTTATGTGGT+TGG | + | chr2_3:35469954-35469973 | None:intergenic | 35.0% | |
| TCAAGATGTGAAGAACATGA+AGG | - | chr2_3:35469978-35469997 | Msa0289270:intron | 35.0% | |
| GAGTTGTACTAAGCAAAGAT+AGG | - | chr2_3:35470132-35470151 | Msa0289270:intron | 35.0% | |
| !! | ACTCAAAGTACTGCAGAAAA+AGG | - | chr2_3:35470177-35470196 | Msa0289270:intron | 35.0% |
| AACATGCGAATTCACAGATT+TGG | + | chr2_3:35470265-35470284 | None:intergenic | 35.0% | |
| TGAATGTTGTAACTCCCTAA+TGG | + | chr2_3:35470408-35470427 | None:intergenic | 35.0% | |
| TGTTGATACTCAACAGTGTA+TGG | - | chr2_3:35470442-35470461 | Msa0289270:intron | 35.0% | |
| ATCCACAATTGCATCACAAT+CGG | - | chr2_3:35470552-35470571 | Msa0289270:intron | 35.0% | |
| AAACTGTTTCAAGGGCAATT+TGG | - | chr2_3:35470866-35470885 | Msa0289270:CDS | 35.0% | |
| AACTGTTTCAAGGGCAATTT+GGG | - | chr2_3:35470867-35470886 | Msa0289270:CDS | 35.0% | |
| ATTGAAAGAACATGACTGCA+TGG | + | chr2_3:35471029-35471048 | None:intergenic | 35.0% | |
| TAGGATTGACTACCTAGATT+TGG | - | chr2_3:35471511-35471530 | Msa0289270:CDS | 35.0% | |
| AGGATTGACTACCTAGATTT+GGG | - | chr2_3:35471512-35471531 | Msa0289270:CDS | 35.0% | |
| ! | CTATACTGATTGTCATAGCA+AGG | - | chr2_3:35471744-35471763 | Msa0289270:CDS | 35.0% |
| ATATCAACTTCCTTTGTCCA+TGG | - | chr2_3:35472058-35472077 | Msa0289270:CDS | 35.0% | |
| CTATTGAACAATTGCGATTC+TGG | - | chr2_3:35472133-35472152 | Msa0289270:CDS | 35.0% | |
| ! | TATTCCATGCCTTCTCTTTT+TGG | - | chr2_3:35472202-35472221 | Msa0289270:CDS | 35.0% |
| AAGATCCAACCAAAAAGAGA+AGG | + | chr2_3:35472214-35472233 | None:intergenic | 35.0% | |
| ATGAATCTACTTGCATCTCT+AGG | - | chr2_3:35472271-35472290 | Msa0289270:CDS | 35.0% | |
| TGAATCTACTTGCATCTCTA+GGG | - | chr2_3:35472272-35472291 | Msa0289270:CDS | 35.0% | |
| GACTTCCAAATTTATTGCAG+AGG | - | chr2_3:35472316-35472335 | Msa0289270:CDS | 35.0% | |
| TTATTGCAGAGGTTTAGTCT+TGG | - | chr2_3:35472327-35472346 | Msa0289270:CDS | 35.0% | |
| !! | GTTTAGTCTTGGAGTTATGT+TGG | - | chr2_3:35472338-35472357 | Msa0289270:CDS | 35.0% |
| !!! | ACTCTTTTTTCGTTGGTGTT+AGG | - | chr2_3:35472444-35472463 | Msa0289270:CDS | 35.0% |
| ATGCTTTCAGAGTTCTTGAA+AGG | - | chr2_3:35472487-35472506 | Msa0289270:CDS | 35.0% | |
| TGCTTTCAGAGTTCTTGAAA+GGG | - | chr2_3:35472488-35472507 | Msa0289270:CDS | 35.0% | |
| !! | TGTAGGTGGATTAGAAATGG+TGG | + | chr2_3:35468768-35468787 | None:intergenic | 40.0% |
| GCTAATCTCTTCCAATCCTT+CGG | - | chr2_3:35468815-35468834 | Msa0289270:intron | 40.0% | |
| AATTCGGAAGAGAAGAGGAA+GGG | + | chr2_3:35468844-35468863 | None:intergenic | 40.0% | |
| AAATTCGGAAGAGAAGAGGA+AGG | + | chr2_3:35468845-35468864 | None:intergenic | 40.0% | |
| TCAAGATTGCCTTTCTGTGT+TGG | - | chr2_3:35468973-35468992 | Msa0289270:intron | 40.0% | |
| ! | AACAAGTTGGCGATCATCAA+CGG | + | chr2_3:35469067-35469086 | None:intergenic | 40.0% |
| TGTAGAACAACGCAACAAGT+TGG | + | chr2_3:35469080-35469099 | None:intergenic | 40.0% | |
| ATTTCCCATTGCAGTTGTCA+TGG | - | chr2_3:35469195-35469214 | Msa0289270:intron | 40.0% | |
| TTTCCCATTGCAGTTGTCAT+GGG | - | chr2_3:35469196-35469215 | Msa0289270:intron | 40.0% | |
| ATGGGGGAAACTCAAATTGT+TGG | - | chr2_3:35469214-35469233 | Msa0289270:intron | 40.0% | |
| ! | TATGGAATTTGGGGTTCCTA+AGG | - | chr2_3:35469252-35469271 | Msa0289270:intron | 40.0% |
| GGGTTGTTAGATTGTTTCCT+AGG | - | chr2_3:35469287-35469306 | Msa0289270:CDS | 40.0% | |
| !!! | TTTCCTAGGGTTTTGGGATT+TGG | - | chr2_3:35469301-35469320 | Msa0289270:CDS | 40.0% |
| ATTCCAAATCCCAAAACCCT+AGG | + | chr2_3:35469307-35469326 | None:intergenic | 40.0% | |
| !!! | GGTTTTGGGATTTGGAATTG+AGG | - | chr2_3:35469309-35469328 | Msa0289270:intron | 40.0% |
| ! | TGGGATTTGGAATTGAGGAT+AGG | - | chr2_3:35469314-35469333 | Msa0289270:intron | 40.0% |
| !! | AGCTGTTGATTCATGAGTTG+AGG | - | chr2_3:35469341-35469360 | Msa0289270:intron | 40.0% |
| ! | GATTCATGAGTTGAGGAGTT+TGG | - | chr2_3:35469348-35469367 | Msa0289270:intron | 40.0% |
| ! | TTCATGAGTTGAGGAGTTTG+GGG | - | chr2_3:35469350-35469369 | Msa0289270:intron | 40.0% |
| ! | TGGAGATTGGGGAATTTTCA+CGG | - | chr2_3:35469428-35469447 | Msa0289270:CDS | 40.0% |
| ! | TGTTGCAGAGTTTGAAATGC+AGG | - | chr2_3:35469461-35469480 | Msa0289270:CDS | 40.0% |
| ! | GTTGCAGAGTTTGAAATGCA+GGG | - | chr2_3:35469462-35469481 | Msa0289270:CDS | 40.0% |
| !! | TTTTTGGAGAGGGTTTGGTT+AGG | - | chr2_3:35469503-35469522 | Msa0289270:CDS | 40.0% |
| !! | TTTTGGAGAGGGTTTGGTTA+GGG | - | chr2_3:35469504-35469523 | Msa0289270:CDS | 40.0% |
| !! | TTGAGAGTGGATTGTTTGTG+TGG | - | chr2_3:35469544-35469563 | Msa0289270:intron | 40.0% |
| ! | GAACCAAGGTTGATTGCTTA+CGG | - | chr2_3:35469610-35469629 | Msa0289270:intron | 40.0% |
| AAACCGTAAGCAATCAACCT+TGG | + | chr2_3:35469616-35469635 | None:intergenic | 40.0% | |
| ! | AAGGTTGATTGCTTACGGTT+TGG | - | chr2_3:35469615-35469634 | Msa0289270:intron | 40.0% |
| ! | TGGGTTTGAAGTTGGATTGA+AGG | - | chr2_3:35469792-35469811 | Msa0289270:intron | 40.0% |
| AGGACATCATCAAACCAACT+AGG | - | chr2_3:35469812-35469831 | Msa0289270:intron | 40.0% | |
| !!! | ATATGGGAGATTTTCGGGTA+AGG | - | chr2_3:35469885-35469904 | Msa0289270:intron | 40.0% |
| GTTAAAAGTAAGCATCCAGC+TGG | - | chr2_3:35469913-35469932 | Msa0289270:intron | 40.0% | |
| CCACATAAGTTTCCTCAAAC+CGG | - | chr2_3:35469955-35469974 | Msa0289270:intron | 40.0% | |
| CATGTTCTTCACATCTTGAC+CGG | + | chr2_3:35469977-35469996 | None:intergenic | 40.0% | |
| GAAGAACATGAAGGCTTTCA+TGG | - | chr2_3:35469987-35470006 | Msa0289270:intron | 40.0% | |
| TCATGGATTCAATGCTGTAG+TGG | - | chr2_3:35470004-35470023 | Msa0289270:intron | 40.0% | |
| CGTGTTCAAGCTCAAAATCA+TGG | + | chr2_3:35470065-35470084 | None:intergenic | 40.0% | |
| TGCAGTACTTTGAGTAATGC+AGG | + | chr2_3:35470172-35470191 | None:intergenic | 40.0% | |
| AGTACTGCAGAAAAAGGAGA+AGG | - | chr2_3:35470183-35470202 | Msa0289270:intron | 40.0% | |
| ! | TGTTTGGAACAGTAGAGTTG+AGG | - | chr2_3:35470382-35470401 | Msa0289270:intron | 40.0% |
| ! | TACCGATTGTGATGCAATTG+TGG | + | chr2_3:35470557-35470576 | None:intergenic | 40.0% |
| TTGCATCACAATCGGTATTC+TGG | - | chr2_3:35470560-35470579 | Msa0289270:intron | 40.0% | |
| CGCTATTATCCTCATTGTAG+CGG | + | chr2_3:35470731-35470750 | None:intergenic | 40.0% | |
| CGCTACAATGAGGATAATAG+CGG | - | chr2_3:35470729-35470748 | Msa0289270:intron | 40.0% | |
| ACGGCGCAAATGAATGAATT+TGG | + | chr2_3:35470934-35470953 | None:intergenic | 40.0% | |
| TTAGGGCTCACAAACTTGAA+CGG | + | chr2_3:35470953-35470972 | None:intergenic | 40.0% | |
| ! | GAGGAAGAAGAAAAGCATGA+TGG | + | chr2_3:35471157-35471176 | None:intergenic | 40.0% |
| AGGTAGTCAATCCTAGATAG+CGG | + | chr2_3:35471506-35471525 | None:intergenic | 40.0% | |
| AACCCCAAAAGCTATCTCAA+GGG | - | chr2_3:35471548-35471567 | Msa0289270:CDS | 40.0% | |
| TAACTTTAGCCAGTTGTCCA+TGG | + | chr2_3:35472078-35472097 | None:intergenic | 40.0% | |
| ATGGACAACTGGCTAAAGTT+AGG | - | chr2_3:35472077-35472096 | Msa0289270:CDS | 40.0% | |
| TGGACAACTGGCTAAAGTTA+GGG | - | chr2_3:35472078-35472097 | Msa0289270:CDS | 40.0% | |
| TTGAACAATTGCGATTCTGG+AGG | - | chr2_3:35472136-35472155 | Msa0289270:CDS | 40.0% | |
| TGAACAATTGCGATTCTGGA+GGG | - | chr2_3:35472137-35472156 | Msa0289270:CDS | 40.0% | |
| ! | AGAGAAGGCATGGAATATCT+CGG | + | chr2_3:35472199-35472218 | None:intergenic | 40.0% |
| ! | CGATGGTTGACTTAAGAAAG+TGG | - | chr2_3:35472363-35472382 | Msa0289270:CDS | 40.0% |
| !! | AAGTGGATTGCAACAAGAAG+TGG | - | chr2_3:35472380-35472399 | Msa0289270:CDS | 40.0% |
| TCTTGAAAGGGTGACATTAC+AGG | - | chr2_3:35472500-35472519 | Msa0289270:CDS | 40.0% | |
| ! | CCAGAATTTGTTCCAAAGCT+CGG | - | chr2_3:35472549-35472568 | Msa0289270:CDS | 40.0% |
| ! | TATTGGCATTTGGGCTTTTC+AGG | - | chr2_3:35472589-35472608 | Msa0289270:CDS | 40.0% |
| ! | ATTGGCATTTGGGCTTTTCA+GGG | - | chr2_3:35472590-35472609 | Msa0289270:CDS | 40.0% |
| GAGGAAATTCGGAAGAGAAG+AGG | + | chr2_3:35468849-35468868 | None:intergenic | 45.0% | |
| !! | AGAGGAAGTGGTTTTTGGAG+AGG | + | chr2_3:35468868-35468887 | None:intergenic | 45.0% |
| ! | GATCGGTATTGAAGAGGAAG+TGG | + | chr2_3:35468880-35468899 | None:intergenic | 45.0% |
| GGTAAGAGATTGACGAAGGT+GGG | + | chr2_3:35468906-35468925 | None:intergenic | 45.0% | |
| TGGTAAGAGATTGACGAAGG+TGG | + | chr2_3:35468907-35468926 | None:intergenic | 45.0% | |
| ATTGGGGTTCCAACACAGAA+AGG | + | chr2_3:35468985-35469004 | None:intergenic | 45.0% | |
| ! | ACAAGTTGGCGATCATCAAC+GGG | + | chr2_3:35469066-35469085 | None:intergenic | 45.0% |
| TTCCCATTGCAGTTGTCATG+GGG | - | chr2_3:35469197-35469216 | Msa0289270:intron | 45.0% | |
| ! | TGTTAGGGATCCAAGGGTTT+TGG | - | chr2_3:35469402-35469421 | Msa0289270:intron | 45.0% |
| ! | GTTAGGGATCCAAGGGTTTT+GGG | - | chr2_3:35469403-35469422 | Msa0289270:intron | 45.0% |
| ATCTCCATTCCCAAAACCCT+TGG | + | chr2_3:35469415-35469434 | None:intergenic | 45.0% | |
| !!! | AGGGTTTTGGGAATGGAGAT+TGG | - | chr2_3:35469415-35469434 | Msa0289270:intron | 45.0% |
| !!! | GGGTTTTGGGAATGGAGATT+GGG | - | chr2_3:35469416-35469435 | Msa0289270:intron | 45.0% |
| !!! | GGTTTTGGGAATGGAGATTG+GGG | - | chr2_3:35469417-35469436 | Msa0289270:intron | 45.0% |
| !! | GAGGATTTTTGGAGAGGGTT+TGG | - | chr2_3:35469498-35469517 | Msa0289270:CDS | 45.0% |
| ! | GTGGATTGTTTGTGTGGTCA+CGG | - | chr2_3:35469550-35469569 | Msa0289270:intron | 45.0% |
| ! | ACACCTTCAAAGCATCCCTA+CGG | + | chr2_3:35469582-35469601 | None:intergenic | 45.0% |
| !! | TGCTTTGAAGGTGTTGTGGA+AGG | - | chr2_3:35469588-35469607 | Msa0289270:intron | 45.0% |
| ! | GTTGATTGCTTACGGTTTGG+AGG | - | chr2_3:35469618-35469637 | Msa0289270:intron | 45.0% |
| ! | GGTGCAATTGGGTTTGAAGT+TGG | - | chr2_3:35469784-35469803 | Msa0289270:intron | 45.0% |
| ! | CCGGTTTGAGGAAACTTATG+TGG | + | chr2_3:35469958-35469977 | None:intergenic | 45.0% |
| !! | TTCACATCTTGACCGGTTTG+AGG | + | chr2_3:35469970-35469989 | None:intergenic | 45.0% |
| ATTCCATGAGCTACTGCTTG+TGG | + | chr2_3:35470363-35470382 | None:intergenic | 45.0% | |
| GCAGTAGCTCATGGAATGTT+TGG | - | chr2_3:35470366-35470385 | Msa0289270:intron | 45.0% | |
| ACAGTAGAGTTGAGGCCATT+AGG | - | chr2_3:35470390-35470409 | Msa0289270:intron | 45.0% | |
| CAGTAGAGTTGAGGCCATTA+GGG | - | chr2_3:35470391-35470410 | Msa0289270:intron | 45.0% | |
| GTGATGCAATTGTGGATGCA+AGG | + | chr2_3:35470549-35470568 | None:intergenic | 45.0% | |
| CAGAGCGATGAAAACGGTTA+GGG | + | chr2_3:35470970-35470989 | None:intergenic | 45.0% | |
| ACAGAGCGATGAAAACGGTT+AGG | + | chr2_3:35470971-35470990 | None:intergenic | 45.0% | |
| ACGGAACAGAGCGATGAAAA+CGG | + | chr2_3:35470976-35470995 | None:intergenic | 45.0% | |
| CGATGGGTGCAAAACTTGAA+CGG | + | chr2_3:35470995-35471014 | None:intergenic | 45.0% | |
| GAAAGAACATGACTGCATGG+TGG | + | chr2_3:35471026-35471045 | None:intergenic | 45.0% | |
| ! | ATAGCGGGGATAGCTTATAG+CGG | + | chr2_3:35471490-35471509 | None:intergenic | 45.0% |
| ATAAGCTATCCCCGCTATCT+AGG | - | chr2_3:35471492-35471511 | Msa0289270:CDS | 45.0% | |
| GTAGTCAATCCTAGATAGCG+GGG | + | chr2_3:35471504-35471523 | None:intergenic | 45.0% | |
| GGTAGTCAATCCTAGATAGC+GGG | + | chr2_3:35471505-35471524 | None:intergenic | 45.0% | |
| TGACTACCTAGATTTGGGCT+AGG | - | chr2_3:35471517-35471536 | Msa0289270:CDS | 45.0% | |
| CTCAAACCTAGCCCAAATCT+AGG | + | chr2_3:35471526-35471545 | None:intergenic | 45.0% | |
| CAACCCCAAAAGCTATCTCA+AGG | - | chr2_3:35471547-35471566 | Msa0289270:CDS | 45.0% | |
| ACCCCAAAAGCTATCTCAAG+GGG | - | chr2_3:35471549-35471568 | Msa0289270:CDS | 45.0% | |
| ! | GTTGGAGCGGAAAACTTGTT+TGG | - | chr2_3:35471992-35472011 | Msa0289270:CDS | 45.0% |
| TTCCTTTGTCCATGGACAAC+TGG | - | chr2_3:35472066-35472085 | Msa0289270:CDS | 45.0% | |
| CAACTGGCTAAAGTTAGGGA+AGG | - | chr2_3:35472082-35472101 | Msa0289270:CDS | 45.0% | |
| TGGAGGGTTTGCATTCGATA+TGG | - | chr2_3:35472153-35472172 | Msa0289270:CDS | 45.0% | |
| CCAACCAAAAAGAGAAGGCA+TGG | + | chr2_3:35472209-35472228 | None:intergenic | 45.0% | |
| !! | CCATGCCTTCTCTTTTTGGT+TGG | - | chr2_3:35472206-35472225 | Msa0289270:CDS | 45.0% |
| ! | ATCTACTTGCATCTCTAGGG+AGG | - | chr2_3:35472275-35472294 | Msa0289270:CDS | 45.0% |
| ! | TAGGGAGGCATATCTTGTTC+TGG | - | chr2_3:35472290-35472309 | Msa0289270:CDS | 45.0% |
| TTGGAGTTATGTTGGTGCGA+TGG | - | chr2_3:35472346-35472365 | Msa0289270:CDS | 45.0% | |
| GTGACATTACAGGAAGCCAA+TGG | - | chr2_3:35472510-35472529 | Msa0289270:CDS | 45.0% | |
| !! | GGAACAAATTCTGGAATCCG+TGG | + | chr2_3:35472543-35472562 | None:intergenic | 45.0% |
| !! | CCGAGCTTTGGAACAAATTC+TGG | + | chr2_3:35472552-35472571 | None:intergenic | 45.0% |
| ATCAACTCAAGTCCGAGCTT+TGG | + | chr2_3:35472564-35472583 | None:intergenic | 45.0% | |
| !! | ATGTTTATAAATAATAATAT+AGG | - | chr2_3:35470589-35470608 | Msa0289270:intron | 5.0% |
| AGGAAGGGAAACCGAAGGAT+TGG | + | chr2_3:35468829-35468848 | None:intergenic | 50.0% | |
| AGAAGAGGAAGGGAAACCGA+AGG | + | chr2_3:35468834-35468853 | None:intergenic | 50.0% | |
| ! | GGGATGGATCGGTATTGAAG+AGG | + | chr2_3:35468886-35468905 | None:intergenic | 50.0% |
| TTGACGAAGGTGGGATGGAT+CGG | + | chr2_3:35468897-35468916 | None:intergenic | 50.0% | |
| AGAGATTGACGAAGGTGGGA+TGG | + | chr2_3:35468902-35468921 | None:intergenic | 50.0% | |
| GGGTGGTAAGAGATTGACGA+AGG | + | chr2_3:35468910-35468929 | None:intergenic | 50.0% | |
| !! | CGGGGAAGCATTAGAAAGCT+TGG | + | chr2_3:35469047-35469066 | None:intergenic | 50.0% |
| ! | CAAGTTGGCGATCATCAACG+GGG | + | chr2_3:35469065-35469084 | None:intergenic | 50.0% |
| TCCCATTGCAGTTGTCATGG+GGG | - | chr2_3:35469198-35469217 | Msa0289270:intron | 50.0% | |
| TCCCCCATGACAACTGCAAT+GGG | + | chr2_3:35469202-35469221 | None:intergenic | 50.0% | |
| TTCCCCCATGACAACTGCAA+TGG | + | chr2_3:35469203-35469222 | None:intergenic | 50.0% | |
| GGAGGTTGTTAGGGATCCAA+GGG | - | chr2_3:35469396-35469415 | Msa0289270:intron | 50.0% | |
| !!! | GGATCCAAGGGTTTTGGGAA+TGG | - | chr2_3:35469408-35469427 | Msa0289270:intron | 50.0% |
| ! | GCAGAGTTTGAAATGCAGGG+AGG | - | chr2_3:35469465-35469484 | Msa0289270:CDS | 50.0% |
| GCAGGGAGGCAATTAAAGAG+AGG | - | chr2_3:35469479-35469498 | Msa0289270:CDS | 50.0% | |
| TGGTCACGGTTTGATCCGTA+GGG | - | chr2_3:35469564-35469583 | Msa0289270:intron | 50.0% | |
| GATCCGTAGGGATGCTTTGA+AGG | - | chr2_3:35469576-35469595 | Msa0289270:intron | 50.0% | |
| !! | GGGATGCTTTGAAGGTGTTG+TGG | - | chr2_3:35469584-35469603 | Msa0289270:intron | 50.0% |
| ! | AGGTGTTGTGGAAGGAACCA+AGG | - | chr2_3:35469596-35469615 | Msa0289270:intron | 50.0% |
| GTAAGCATCCAGCTGGACTT+TGG | - | chr2_3:35469920-35469939 | Msa0289270:intron | 50.0% | |
| AACAGCTTCCAAAGTCCAGC+TGG | + | chr2_3:35469931-35469950 | None:intergenic | 50.0% | |
| ! | TCTCGCGCTATTGACTACGT+AGG | + | chr2_3:35470671-35470690 | None:intergenic | 50.0% |
| AGCGGAGCAGTTAACGATAG+TGG | - | chr2_3:35470747-35470766 | Msa0289270:intron | 50.0% | |
| ATGACTGCATGGTGGCTGTA+CGG | + | chr2_3:35471018-35471037 | None:intergenic | 50.0% | |
| TAGCGGGGATAGCTTATAGC+GGG | + | chr2_3:35471489-35471508 | None:intergenic | 50.0% | |
| ! | CCCCCTTGAGATAGCTTTTG+GGG | + | chr2_3:35471553-35471572 | None:intergenic | 50.0% |
| CCCCAAAAGCTATCTCAAGG+GGG | - | chr2_3:35471550-35471569 | Msa0289270:CDS | 50.0% | |
| ! | CCCCCCTTGAGATAGCTTTT+GGG | + | chr2_3:35471554-35471573 | None:intergenic | 50.0% |
| CCCAAAAGCTATCTCAAGGG+GGG | - | chr2_3:35471551-35471570 | Msa0289270:CDS | 50.0% | |
| ! | TCCCCCCTTGAGATAGCTTT+TGG | + | chr2_3:35471555-35471574 | None:intergenic | 50.0% |
| AAAAGCTATCTCAAGGGGGG+AGG | - | chr2_3:35471554-35471573 | Msa0289270:CDS | 50.0% | |
| GACTCTTCCAAAGCTGCTGT+GGG | + | chr2_3:35471716-35471735 | None:intergenic | 50.0% | |
| AGACTCTTCCAAAGCTGCTG+TGG | + | chr2_3:35471717-35471736 | None:intergenic | 50.0% | |
| GGTTAAGGTCTTGGCTCAGT+TGG | - | chr2_3:35471974-35471993 | Msa0289270:CDS | 50.0% | |
| AGCCAGTTGTCCATGGACAA+AGG | + | chr2_3:35472071-35472090 | None:intergenic | 50.0% | |
| !! | AATTCTGGAATCCGTGGCAC+AGG | + | chr2_3:35472537-35472556 | None:intergenic | 50.0% |
| !! | TTTGGGGTTTTCCAGCCGAG+AGG | - | chr2_3:35469366-35469385 | Msa0289270:intron | 55.0% |
| ! | GTTTTCCAGCCGAGAGGTCA+GGG | - | chr2_3:35469372-35469391 | Msa0289270:intron | 55.0% |
| CGGAGGTTGTTAGGGATCCA+AGG | - | chr2_3:35469395-35469414 | Msa0289270:intron | 55.0% | |
| GTGGTCACGGTTTGATCCGT+AGG | - | chr2_3:35469563-35469582 | Msa0289270:intron | 55.0% | |
| CCATGAGCTACTGCTTGTGG+TGG | + | chr2_3:35470360-35470379 | None:intergenic | 55.0% | |
| CCACCACAAGCAGTAGCTCA+TGG | - | chr2_3:35470357-35470376 | Msa0289270:intron | 55.0% | |
| TAGCGGCAGAGTGGAGTAGA+GGG | - | chr2_3:35470702-35470721 | Msa0289270:intron | 55.0% | |
| ! | TTAACGATAGTGGCCGCTCC+AGG | - | chr2_3:35470757-35470776 | Msa0289270:intron | 55.0% |
| GATGGATCCCACAGCAGCTT+TGG | - | chr2_3:35471706-35471725 | Msa0289270:CDS | 55.0% | |
| AGGTCTTGGCTCAGTTGGAG+CGG | - | chr2_3:35471979-35471998 | Msa0289270:CDS | 55.0% | |
| AAGCCAATGGACCTGTGCCA+CGG | - | chr2_3:35472523-35472542 | Msa0289270:CDS | 55.0% | |
| AATCCGTGGCACAGGTCCAT+TGG | + | chr2_3:35472529-35472548 | None:intergenic | 55.0% | |
| ! | GGTTTTCCAGCCGAGAGGTC+AGG | - | chr2_3:35469371-35469390 | Msa0289270:intron | 60.0% |
| AGGTCAGGGCGGAGGTTGTT+AGG | - | chr2_3:35469386-35469405 | Msa0289270:intron | 60.0% | |
| GGTCAGGGCGGAGGTTGTTA+GGG | - | chr2_3:35469387-35469406 | Msa0289270:intron | 60.0% | |
| ACTCCACTCTGCCGCTACAG+CGG | + | chr2_3:35470699-35470718 | None:intergenic | 60.0% | |
| GTAGCGGCAGAGTGGAGTAG+AGG | - | chr2_3:35470701-35470720 | Msa0289270:intron | 60.0% | |
| AGAGGGTCGCCGCTACAATG+AGG | - | chr2_3:35470719-35470738 | Msa0289270:intron | 60.0% | |
| CGCCAAGATCTCACCTGGAG+CGG | + | chr2_3:35470773-35470792 | None:intergenic | 60.0% | |
| CGCTCCAGGTGAGATCTTGG+CGG | - | chr2_3:35470771-35470790 | Msa0289270:intron | 60.0% | |
| CAGGTGAGATCTTGGCGGAG+CGG | - | chr2_3:35470776-35470795 | Msa0289270:intron | 60.0% | |
| AGGTGAGATCTTGGCGGAGC+GGG | - | chr2_3:35470777-35470796 | Msa0289270:intron | 60.0% | |
| CATGGTGGCTGTACGGCGAT+GGG | + | chr2_3:35471011-35471030 | None:intergenic | 60.0% | |
| TTCCAGCCGAGAGGTCAGGG+CGG | - | chr2_3:35469375-35469394 | Msa0289270:intron | 65.0% | |
| CAACCTCCGCCCTGACCTCT+CGG | + | chr2_3:35469384-35469403 | None:intergenic | 65.0% | |
| GCGAGATAGCGCCGCTGTAG+CGG | - | chr2_3:35470685-35470704 | Msa0289270:intron | 65.0% | |
| GGCCGCTCCAGGTGAGATCT+TGG | - | chr2_3:35470768-35470787 | Msa0289270:intron | 65.0% | |
| CGCTCCGCCAAGATCTCACC+TGG | + | chr2_3:35470778-35470797 | None:intergenic | 65.0% | |
| GGTGAGATCTTGGCGGAGCG+GGG | - | chr2_3:35470778-35470797 | Msa0289270:intron | 65.0% | |
| GCATGGTGGCTGTACGGCGA+TGG | + | chr2_3:35471012-35471031 | None:intergenic | 65.0% | |
| CTCCGCCCTGACCTCTCGGC+TGG | + | chr2_3:35469380-35469399 | None:intergenic | 75.0% | |
| CAGCCGAGAGGTCAGGGCGG+AGG | - | chr2_3:35469378-35469397 | Msa0289270:intron | 75.0% | |
| GCGCCGCTGTAGCGGCAGAG+TGG | - | chr2_3:35470693-35470712 | Msa0289270:intron | 75.0% | |
| ! | GCGGAGCGGGGTCGCAGAGC+AGG | - | chr2_3:35470790-35470809 | Msa0289270:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 35468677 | 35472629 | 35468677 | ID=Msa0289270;Name=Msa0289270 |
| chr2_3 | mRNA | 35468677 | 35472629 | 35468677 | ID=Msa0289270-mRNA-1;Parent=Msa0289270;Name=Msa0289270-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.25|0|1|1|1|5|0|614 |
| chr2_3 | exon | 35471287 | 35472629 | 35471287 | ID=Msa0289270-mRNA-1:exon:11465;Parent=Msa0289270-mRNA-1 |
| chr2_3 | exon | 35470843 | 35471044 | 35470843 | ID=Msa0289270-mRNA-1:exon:11464;Parent=Msa0289270-mRNA-1 |
| chr2_3 | exon | 35469428 | 35469544 | 35469428 | ID=Msa0289270-mRNA-1:exon:11463;Parent=Msa0289270-mRNA-1 |
| chr2_3 | exon | 35469276 | 35469325 | 35469276 | ID=Msa0289270-mRNA-1:exon:11462;Parent=Msa0289270-mRNA-1 |
| chr2_3 | exon | 35468677 | 35468809 | 35468677 | ID=Msa0289270-mRNA-1:exon:11461;Parent=Msa0289270-mRNA-1 |
| chr2_3 | CDS | 35471287 | 35472629 | 35471287 | ID=Msa0289270-mRNA-1:cds;Parent=Msa0289270-mRNA-1 |
| chr2_3 | CDS | 35470843 | 35471044 | 35470843 | ID=Msa0289270-mRNA-1:cds;Parent=Msa0289270-mRNA-1 |
| chr2_3 | CDS | 35469428 | 35469544 | 35469428 | ID=Msa0289270-mRNA-1:cds;Parent=Msa0289270-mRNA-1 |
| chr2_3 | CDS | 35469276 | 35469325 | 35469276 | ID=Msa0289270-mRNA-1:cds;Parent=Msa0289270-mRNA-1 |
| chr2_3 | CDS | 35468677 | 35468809 | 35468677 | ID=Msa0289270-mRNA-1:cds;Parent=Msa0289270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
