Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410120 | sp|Q9C6A1|MTEFE_ARATH | 48.869 | 442 | 222 | 2 | 6 | 447 | 7 | 444 | 7.30e-144 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410120 | A0A072V7X6 | 90.345 | 435 | 39 | 2 | 14 | 448 | 1 | 432 | 0.0 | 790 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1410120 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0289270 | Msa1410120 | 0.997329 | 1.247711e-240 | -8.615850e-47 |
| Msa0327130 | Msa1410120 | 0.834862 | 2.344167e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410120 | MtrunA17_Chr2g0308761 | 89.885 | 435 | 41 | 2 | 14 | 448 | 1 | 432 | 0.0 | 787 |
| Msa1410120 | MtrunA17_Chr2g0308431 | 92.308 | 91 | 5 | 1 | 334 | 424 | 1 | 89 | 5.47e-52 | 174 |
| Msa1410120 | MtrunA17_Chr4g0020831 | 92.308 | 91 | 5 | 1 | 334 | 424 | 1 | 89 | 3.16e-51 | 172 |
| Msa1410120 | MtrunA17_Chr2g0308421 | 84.615 | 52 | 7 | 1 | 527 | 577 | 1 | 52 | 1.11e-19 | 82.8 |
| Msa1410120 | MtrunA17_Chr1g0160961 | 63.953 | 86 | 28 | 3 | 518 | 602 | 655 | 738 | 1.28e-19 | 94.0 |
| Msa1410120 | MtrunA17_Chr5g0419891 | 53.922 | 102 | 29 | 4 | 517 | 602 | 515 | 614 | 1.66e-16 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410120 | AT1G74120.1 | 48.869 | 442 | 222 | 2 | 6 | 447 | 7 | 444 | 7.42e-145 | 427 |
| Msa1410120 | AT5G54180.1 | 29.279 | 222 | 151 | 5 | 153 | 370 | 253 | 472 | 1.49e-15 | 80.1 |
| Msa1410120 | AT1G62010.1 | 26.562 | 192 | 122 | 5 | 211 | 399 | 213 | 388 | 4.64e-11 | 65.9 |
Find 144 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGCTTGGATTTGAATTT+TGG | 0.098657 | tig0023613:+65596 | None:intergenic |
| AACCCCAATTTCTACATAAT+TGG | 0.109235 | tig0023613:-65631 | Msa1410120:CDS |
| ATTCCCAATTATGTAGAAAT+TGG | 0.124209 | tig0023613:+65627 | None:intergenic |
| ACAATTGTACAGAGATTTAT+TGG | 0.191689 | tig0023613:-62820 | Msa1410120:CDS |
| CCGAGCTTTGGAACAAATTC+TGG | 0.197617 | tig0023613:+62078 | None:intergenic |
| TAGATTGTTTCCTAGGGTTT+TGG | 0.199228 | tig0023613:-65333 | Msa1410120:CDS |
| AATCTTGAATAAGGGAAATT+AGG | 0.210110 | tig0023613:+65669 | None:intergenic |
| AAATTTCAAGTGGGTTTAAA+TGG | 0.215029 | tig0023613:+65522 | None:intergenic |
| CAGAAAGGCAATCTTGAATA+AGG | 0.235623 | tig0023613:+65660 | None:intergenic |
| TGTTAGGGATCCAAGGGTTT+TGG | 0.241406 | tig0023613:-65225 | Msa1410120:CDS |
| ATTCATGAGTTGAGGAGTTT+GGG | 0.255104 | tig0023613:-65278 | Msa1410120:CDS |
| ACTTGAGTTGATCAAAATAT+TGG | 0.275160 | tig0023613:-62055 | Msa1410120:CDS |
| ATTTCTACATAATTGGGAAT+TGG | 0.292126 | tig0023613:-65624 | Msa1410120:CDS |
| TCTTGAAAGGGTGACATTAC+AGG | 0.292157 | tig0023613:-62127 | Msa1410120:CDS |
| ACAGTAGAGTTGAGGCCATT+AGG | 0.295558 | tig0023613:-64237 | Msa1410120:CDS |
| TTGATCAAAATATTGGCATT+TGG | 0.301587 | tig0023613:-62048 | Msa1410120:CDS |
| TTCCCAATTATGTAGAAATT+GGG | 0.304182 | tig0023613:+65628 | None:intergenic |
| CAACACCATATTTCATCCTT+TGG | 0.306291 | tig0023613:+64958 | None:intergenic |
| AGGTCAGGGCGGAGGTTGTT+AGG | 0.309694 | tig0023613:-65241 | Msa1410120:CDS |
| TTAATCCAAAGGATGAAATA+TGG | 0.315058 | tig0023613:-64963 | Msa1410120:CDS |
| TTGAAAGGAAAAGGTGCAAT+TGG | 0.315697 | tig0023613:-64855 | Msa1410120:CDS |
| GATTCATGAGTTGAGGAGTT+TGG | 0.321130 | tig0023613:-65279 | Msa1410120:CDS |
| CAGTAGAGTTGAGGCCATTA+GGG | 0.323647 | tig0023613:-64236 | Msa1410120:CDS |
| TGATCAAAATATTGGCATTT+GGG | 0.327176 | tig0023613:-62047 | Msa1410120:CDS |
| TTTCTACATAATTGGGAATT+GGG | 0.332347 | tig0023613:-65623 | Msa1410120:CDS |
| GAAGAACATGAAGGCTTTCA+TGG | 0.341403 | tig0023613:-64640 | Msa1410120:CDS |
| AACATGCGAATTCACAGATT+TGG | 0.348169 | tig0023613:+64365 | None:intergenic |
| AAGTGGTTCTTACAAGAATA+AGG | 0.352405 | tig0023613:+65909 | None:intergenic |
| GGGTTGTTAGATTGTTTCCT+AGG | 0.353615 | tig0023613:-65340 | Msa1410120:CDS |
| CATGAAGTTCCTTCATACTT+AGG | 0.364333 | tig0023613:-64927 | Msa1410120:CDS |
| GTTGGAGCGGAAAACTTGTT+TGG | 0.369327 | tig0023613:-62635 | Msa1410120:CDS |
| AAAATCTGTAAAACTCTTGA+AGG | 0.378482 | tig0023613:-62770 | Msa1410120:intron |
| GCAGTAGCTCATGGAATGTT+TGG | 0.379837 | tig0023613:-64261 | Msa1410120:CDS |
| AGTTACAACATTCATTAGTT+GGG | 0.385822 | tig0023613:-64213 | Msa1410120:CDS |
| ATCAACTCAAGTCCGAGCTT+TGG | 0.389686 | tig0023613:+62066 | None:intergenic |
| ACCCCAATTTCTACATAATT+GGG | 0.391543 | tig0023613:-65630 | Msa1410120:CDS |
| CACAATCTTTCCAATGGGGT+TGG | 0.394153 | tig0023613:-65963 | None:intergenic |
| AAGGTTGATTGCTTACGGTT+TGG | 0.397737 | tig0023613:-65012 | Msa1410120:CDS |
| GATCCGTAGGGATGCTTTGA+AGG | 0.398149 | tig0023613:-65051 | Msa1410120:CDS |
| TGTTTGGAGTTTATAAAGAA+TGG | 0.398840 | tig0023613:-62619 | Msa1410120:CDS |
| GGTGCAATTGGGTTTGAAGT+TGG | 0.399622 | tig0023613:-64843 | Msa1410120:CDS |
| GAGTTACAACATTCATTAGT+TGG | 0.403178 | tig0023613:-64214 | Msa1410120:CDS |
| TTCCTAAGGATGAAATTGAT+AGG | 0.405215 | tig0023613:-65361 | Msa1410120:CDS |
| ACAAGTTGGCGATCATCAAC+GGG | 0.417533 | tig0023613:+65564 | None:intergenic |
| ACAATCTTTCCAATGGGGTT+GGG | 0.423298 | tig0023613:-65962 | None:intergenic |
| GTAAGCATCCAGCTGGACTT+TGG | 0.424175 | tig0023613:-64707 | Msa1410120:CDS |
| TGAAAGGAAAAGGTGCAATT+GGG | 0.424464 | tig0023613:-64854 | Msa1410120:CDS |
| GCTAATCTCTTCCAATCCTT+CGG | 0.426075 | tig0023613:-65812 | Msa1410120:CDS |
| CATGTTCTTCACATCTTGAC+CGG | 0.428680 | tig0023613:+64653 | None:intergenic |
| TGTTGCAGAGTTTGAAATGC+AGG | 0.431814 | tig0023613:-65166 | Msa1410120:CDS |
| TGGGTTTGAAGTTGGATTGA+AGG | 0.437194 | tig0023613:-64835 | Msa1410120:CDS |
| CGGGGAAGCATTAGAAAGCT+TGG | 0.440265 | tig0023613:+65583 | None:intergenic |
| CCAGAATTTGTTCCAAAGCT+CGG | 0.441601 | tig0023613:-62078 | Msa1410120:CDS |
| TTCACATCTTGACCGGTTTG+AGG | 0.446780 | tig0023613:+64660 | None:intergenic |
| CAGCCGAGAGGTCAGGGCGG+AGG | 0.450679 | tig0023613:-65249 | Msa1410120:CDS |
| CAATTGTACAGAGATTTATT+GGG | 0.454992 | tig0023613:-62819 | Msa1410120:CDS |
| GAACCAAGGTTGATTGCTTA+CGG | 0.455676 | tig0023613:-65017 | Msa1410120:CDS |
| TACTCAATCACATTGTATCT+AGG | 0.456654 | tig0023613:+64879 | None:intergenic |
| TGAATGTTGTAACTCCCTAA+TGG | 0.462308 | tig0023613:+64222 | None:intergenic |
| GTTGTTATTAGTTGAAGAAG+TGG | 0.465877 | tig0023613:+65892 | None:intergenic |
| TCAAGATTGCCTTTCTGTGT+TGG | 0.468440 | tig0023613:-65654 | Msa1410120:CDS |
| TATGGAATTTGGGGTTCCTA+AGG | 0.471062 | tig0023613:-65375 | Msa1410120:CDS |
| ATCTCCATTCCCAAAACCCT+TGG | 0.472530 | tig0023613:+65215 | None:intergenic |
| GGTTAAGGTCTTGGCTCAGT+TGG | 0.473212 | tig0023613:-62653 | Msa1410120:intron |
| CTCCGCCCTGACCTCTCGGC+TGG | 0.473380 | tig0023613:+65250 | None:intergenic |
| GTGGTCACGGTTTGATCCGT+AGG | 0.474464 | tig0023613:-65064 | Msa1410120:CDS |
| GTTTGGAGTTTATAAAGAAT+GGG | 0.474872 | tig0023613:-62618 | Msa1410120:intron |
| ACCCTATCAATTTCATCCTT+AGG | 0.474968 | tig0023613:+65359 | None:intergenic |
| ATTGAGTATTTGAAAGGAAA+AGG | 0.475963 | tig0023613:-64864 | Msa1410120:CDS |
| ATTTCCCATTGCAGTTGTCA+TGG | 0.478760 | tig0023613:-65432 | Msa1410120:CDS |
| TTTCCCATTGCAGTTGTCAT+GGG | 0.479957 | tig0023613:-65431 | Msa1410120:CDS |
| GGTCAGGGCGGAGGTTGTTA+GGG | 0.481020 | tig0023613:-65240 | Msa1410120:CDS |
| GATCGGTATTGAAGAGGAAG+TGG | 0.483347 | tig0023613:+65750 | None:intergenic |
| GTTGATTGCTTACGGTTTGG+AGG | 0.485609 | tig0023613:-65009 | Msa1410120:CDS |
| AGAAAGGCAATCTTGAATAA+GGG | 0.487800 | tig0023613:+65661 | None:intergenic |
| AGGAAGGGAAACCGAAGGAT+TGG | 0.491372 | tig0023613:+65801 | None:intergenic |
| TGGGATTTGGAATTGAGGAT+AGG | 0.491709 | tig0023613:-65313 | Msa1410120:CDS |
| GGTAAGAGATTGACGAAGGT+GGG | 0.494203 | tig0023613:+65724 | None:intergenic |
| GGTTGTTAGATTGTTTCCTA+GGG | 0.496449 | tig0023613:-65339 | Msa1410120:CDS |
| AATGTGATTGAGTATTTGAA+AGG | 0.505696 | tig0023613:-64870 | Msa1410120:CDS |
| TTGTAAAATCTAAGCCTAGT+TGG | 0.506128 | tig0023613:+64801 | None:intergenic |
| AGATGTAGGTGGATTAGAAA+TGG | 0.507251 | tig0023613:+65859 | None:intergenic |
| TGCTTTCAGAGTTCTTGAAA+GGG | 0.508227 | tig0023613:-62139 | Msa1410120:intron |
| CGGAGGTTGTTAGGGATCCA+AGG | 0.508723 | tig0023613:-65232 | Msa1410120:CDS |
| TGGTAAGAGATTGACGAAGG+TGG | 0.510918 | tig0023613:+65723 | None:intergenic |
| ATGCTTTCAGAGTTCTTGAA+AGG | 0.511397 | tig0023613:-62140 | Msa1410120:intron |
| CCACATAAGTTTCCTCAAAC+CGG | 0.511821 | tig0023613:-64672 | Msa1410120:CDS |
| AACAAGTTGGCGATCATCAA+CGG | 0.518122 | tig0023613:+65563 | None:intergenic |
| AATCCGTGGCACAGGTCCAT+TGG | 0.518651 | tig0023613:+62101 | None:intergenic |
| TTCATGAGTTGAGGAGTTTG+GGG | 0.519712 | tig0023613:-65277 | Msa1410120:CDS |
| TGTAGGTGGATTAGAAATGG+TGG | 0.521617 | tig0023613:+65862 | None:intergenic |
| TTTGAGGAAACTTATGTGGT+TGG | 0.523505 | tig0023613:+64676 | None:intergenic |
| AACAGCTTCCAAAGTCCAGC+TGG | 0.524566 | tig0023613:+64699 | None:intergenic |
| AATTCTGGAATCCGTGGCAC+AGG | 0.526371 | tig0023613:+62093 | None:intergenic |
| AAATTCGGAAGAGAAGAGGA+AGG | 0.533269 | tig0023613:+65785 | None:intergenic |
| GTTACAACATTCATTAGTTG+GGG | 0.534750 | tig0023613:-64212 | Msa1410120:CDS |
| TCCCAATTATGTAGAAATTG+GGG | 0.539066 | tig0023613:+65629 | None:intergenic |
| TCCTAAGGATGAAATTGATA+GGG | 0.543797 | tig0023613:-65360 | Msa1410120:CDS |
| GTTAAAAGTAAGCATCCAGC+TGG | 0.546625 | tig0023613:-64714 | Msa1410120:CDS |
| CCGGTTTGAGGAAACTTATG+TGG | 0.548415 | tig0023613:+64672 | None:intergenic |
| TTGACGAAGGTGGGATGGAT+CGG | 0.551796 | tig0023613:+65733 | None:intergenic |
| GTGGATTGTTTGTGTGGTCA+CGG | 0.552758 | tig0023613:-65077 | Msa1410120:CDS |
| ATGGTGGAACCCAACCCCAT+TGG | 0.554824 | tig0023613:+65953 | None:intergenic |
| CCACCACAAGCAGTAGCTCA+TGG | 0.559836 | tig0023613:-64270 | Msa1410120:CDS |
| TGTTGATACTCAACAGTGTA+TGG | 0.561591 | tig0023613:-64185 | Msa1410120:intron |
| ATTCCAAATCCCAAAACCCT+AGG | 0.561947 | tig0023613:+65323 | None:intergenic |
| GTTGCAGAGTTTGAAATGCA+GGG | 0.562878 | tig0023613:-65165 | Msa1410120:CDS |
| ATTGGGGTTCCAACACAGAA+AGG | 0.562957 | tig0023613:+65645 | None:intergenic |
| AGAGATTGACGAAGGTGGGA+TGG | 0.563472 | tig0023613:+65728 | None:intergenic |
| CAACCTCCGCCCTGACCTCT+CGG | 0.563699 | tig0023613:+65246 | None:intergenic |
| CCATGAGCTACTGCTTGTGG+TGG | 0.567964 | tig0023613:+64270 | None:intergenic |
| GAGGAAATTCGGAAGAGAAG+AGG | 0.568672 | tig0023613:+65781 | None:intergenic |
| TTGAGAGTGGATTGTTTGTG+TGG | 0.573095 | tig0023613:-65083 | Msa1410120:CDS |
| TTCCCATTGCAGTTGTCATG+GGG | 0.575497 | tig0023613:-65430 | Msa1410120:CDS |
| AAATTCACACCTAAGTATGA+AGG | 0.579741 | tig0023613:+64918 | None:intergenic |
| TGCTTTGAAGGTGTTGTGGA+AGG | 0.580553 | tig0023613:-65039 | Msa1410120:CDS |
| AGCTGTTGATTCATGAGTTG+AGG | 0.589517 | tig0023613:-65286 | Msa1410120:CDS |
| AATTCGGAAGAGAAGAGGAA+GGG | 0.592899 | tig0023613:+65786 | None:intergenic |
| GGGATGGATCGGTATTGAAG+AGG | 0.598546 | tig0023613:+65744 | None:intergenic |
| GGAGGTTGTTAGGGATCCAA+GGG | 0.599772 | tig0023613:-65231 | Msa1410120:CDS |
| GGGTGGTAAGAGATTGACGA+AGG | 0.601379 | tig0023613:+65720 | None:intergenic |
| AGGTCTTGGCTCAGTTGGAG+CGG | 0.602503 | tig0023613:-62648 | Msa1410120:CDS |
| TGTAGAACAACGCAACAAGT+TGG | 0.609072 | tig0023613:+65550 | None:intergenic |
| AAACCGTAAGCAATCAACCT+TGG | 0.613186 | tig0023613:+65014 | None:intergenic |
| GGGATGCTTTGAAGGTGTTG+TGG | 0.613256 | tig0023613:-65043 | Msa1410120:CDS |
| TGTTTGGAACAGTAGAGTTG+AGG | 0.615894 | tig0023613:-64245 | Msa1410120:CDS |
| AAGCCAATGGACCTGTGCCA+CGG | 0.617584 | tig0023613:-62104 | Msa1410120:CDS |
| GGAACAAATTCTGGAATCCG+TGG | 0.622732 | tig0023613:+62087 | None:intergenic |
| ACTTTACGGGAAATTTCAAG+TGG | 0.628377 | tig0023613:+65512 | None:intergenic |
| TCCCATTGCAGTTGTCATGG+GGG | 0.632407 | tig0023613:-65429 | Msa1410120:CDS |
| ATTCCATGAGCTACTGCTTG+TGG | 0.636151 | tig0023613:+64267 | None:intergenic |
| TGGTCACGGTTTGATCCGTA+GGG | 0.637002 | tig0023613:-65063 | Msa1410120:CDS |
| CTTTACGGGAAATTTCAAGT+GGG | 0.640015 | tig0023613:+65513 | None:intergenic |
| AGGACATCATCAAACCAACT+AGG | 0.642474 | tig0023613:-64815 | Msa1410120:CDS |
| GTGACATTACAGGAAGCCAA+TGG | 0.643356 | tig0023613:-62117 | Msa1410120:CDS |
| AGAAGAGGAAGGGAAACCGA+AGG | 0.647325 | tig0023613:+65796 | None:intergenic |
| ACACCTTCAAAGCATCCCTA+CGG | 0.648597 | tig0023613:+65048 | None:intergenic |
| TCAAGATGTGAAGAACATGA+AGG | 0.654568 | tig0023613:-64649 | Msa1410120:CDS |
| TTTCTGTAATGAGATGTAGG+TGG | 0.659285 | tig0023613:+65848 | None:intergenic |
| GCAGGGAGGCAATTAAAGAG+AGG | 0.662756 | tig0023613:-65148 | Msa1410120:CDS |
| TTCCAGCCGAGAGGTCAGGG+CGG | 0.702811 | tig0023613:-65252 | Msa1410120:CDS |
| AGGTGTTGTGGAAGGAACCA+AGG | 0.704640 | tig0023613:-65031 | Msa1410120:CDS |
| GCAGAGTTTGAAATGCAGGG+AGG | 0.745889 | tig0023613:-65162 | Msa1410120:CDS |
| CAAGTTGGCGATCATCAACG+GGG | 0.759642 | tig0023613:+65565 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTGATTTAAAATTAATTTT+GGG | + | tig0023613:63567-63586 | None:intergenic | 10.0% |
| !!! | TTGTGATTTAAAATTAATTT+TGG | + | tig0023613:63568-63587 | None:intergenic | 10.0% |
| !!! | AAATTAATTTTAAATCACAA+AGG | - | tig0023613:63568-63587 | Msa1410120:intron | 10.0% |
| !!! | AATTAATTTTAAATCACAAA+GGG | - | tig0023613:63569-63588 | Msa1410120:intron | 10.0% |
| !!! | AAAAATATTTTAACAGAAAA+AGG | + | tig0023613:65254-65273 | None:intergenic | 10.0% |
| !!! | TTAATTTTCTTATGGAATTT+GGG | - | tig0023613:62585-62604 | Msa1410120:intron | 15.0% |
| !! | AAGAATTATAAAAATGTTAG+TGG | - | tig0023613:63666-63685 | Msa1410120:intron | 15.0% |
| !!! | TTGAAACAGTTTAATTTTTA+GGG | + | tig0023613:64201-64220 | None:intergenic | 15.0% |
| !! | TAAAAATTAAACTGTTTCAA+GGG | - | tig0023613:64201-64220 | Msa1410120:CDS | 15.0% |
| !! | TATAAAAAAATCTTAAAGTG+AGG | + | tig0023613:64519-64538 | None:intergenic | 15.0% |
| !! | AACATATAATATGAACTTAA+GGG | + | tig0023613:64658-64677 | None:intergenic | 15.0% |
| !!! | GTTAATTTTCTTATGGAATT+TGG | - | tig0023613:62584-62603 | Msa1410120:intron | 20.0% |
| !!! | TAATTTTCTTATGGAATTTG+GGG | - | tig0023613:62586-62605 | Msa1410120:intron | 20.0% |
| !! | CAGAATGTGAAAAAATATAT+GGG | - | tig0023613:63212-63231 | Msa1410120:intron | 20.0% |
| !!! | AAAAATATATGGGAGATTTT+CGG | - | tig0023613:63222-63241 | Msa1410120:intron | 20.0% |
| !!! | CTTGAAACAGTTTAATTTTT+AGG | + | tig0023613:64202-64221 | None:intergenic | 20.0% |
| !! | CTAAAAATTAAACTGTTTCA+AGG | - | tig0023613:64200-64219 | Msa1410120:CDS | 20.0% |
| !! | GAACATATAATATGAACTTA+AGG | + | tig0023613:64659-64678 | None:intergenic | 20.0% |
| !!! | ATGTTTTTCTCGTAAAATTT+GGG | + | tig0023613:64927-64946 | None:intergenic | 20.0% |
| !!! | AATGTTTTTCTCGTAAAATT+TGG | + | tig0023613:64928-64947 | None:intergenic | 20.0% |
| !!! | ACTAATGTTTGATATGATTT+TGG | - | tig0023613:65296-65315 | Msa1410120:CDS | 20.0% |
| !!! | TTGATATAAATTTCAAGTCA+TGG | + | tig0023613:65388-65407 | None:intergenic | 20.0% |
| !!! | ACATGTATCTAAAATTGTTA+GGG | - | tig0023613:65749-65768 | Msa1410120:CDS | 20.0% |
| ! | AATCTTGAATAAGGGAAATT+AGG | + | tig0023613:62304-62323 | None:intergenic | 25.0% |
| ! | TTCCCAATTATGTAGAAATT+GGG | + | tig0023613:62345-62364 | None:intergenic | 25.0% |
| ! | ATTCCCAATTATGTAGAAAT+TGG | + | tig0023613:62346-62365 | None:intergenic | 25.0% |
| ! | ATTTCTACATAATTGGGAAT+TGG | - | tig0023613:62346-62365 | Msa1410120:intron | 25.0% |
| ! | TTTCTACATAATTGGGAATT+GGG | - | tig0023613:62347-62366 | Msa1410120:intron | 25.0% |
| !! | AAATTTCAAGTGGGTTTAAA+TGG | + | tig0023613:62451-62470 | None:intergenic | 25.0% |
| !!! | TTTCTGATGATGTTTTGATA+AGG | - | tig0023613:62504-62523 | Msa1410120:intron | 25.0% |
| !!! | TTCTGATGATGTTTTGATAA+GGG | - | tig0023613:62505-62524 | Msa1410120:intron | 25.0% |
| !! | AGATTGAGTTTTTAATCCAA+AGG | - | tig0023613:62996-63015 | Msa1410120:intron | 25.0% |
| ! | TTAATCCAAAGGATGAAATA+TGG | - | tig0023613:63007-63026 | Msa1410120:intron | 25.0% |
| ! | AATGTGATTGAGTATTTGAA+AGG | - | tig0023613:63100-63119 | Msa1410120:intron | 25.0% |
| ! | ATTGAGTATTTGAAAGGAAA+AGG | - | tig0023613:63106-63125 | Msa1410120:intron | 25.0% |
| !!! | ATTTTTTCACATTCTGGATA+AGG | + | tig0023613:63208-63227 | None:intergenic | 25.0% |
| !!! | CCATATATTTTTTCACATTC+TGG | + | tig0023613:63214-63233 | None:intergenic | 25.0% |
| ! | CCAGAATGTGAAAAAATATA+TGG | - | tig0023613:63211-63230 | Msa1410120:intron | 25.0% |
| !! | AAAATATATGGGAGATTTTC+GGG | - | tig0023613:63223-63242 | Msa1410120:intron | 25.0% |
| ! | AGTTACAACATTCATTAGTT+GGG | - | tig0023613:63757-63776 | Msa1410120:intron | 25.0% |
| !! | AAAAGTGCAAAAAATGAAGA+AGG | + | tig0023613:63815-63834 | None:intergenic | 25.0% |
| ! | AATACGTAAAAGACAAAACA+GGG | + | tig0023613:63963-63982 | None:intergenic | 25.0% |
| ! | AAATACGTAAAAGACAAAAC+AGG | + | tig0023613:63964-63983 | None:intergenic | 25.0% |
| !!! | ACCACTATATTGTTTTAATG+TGG | - | tig0023613:64168-64187 | Msa1410120:intron | 25.0% |
| ! | TCCACATTAAAACAATATAG+TGG | + | tig0023613:64172-64191 | None:intergenic | 25.0% |
| ! | TACAGAGATAACTCATATTA+GGG | + | tig0023613:64419-64438 | None:intergenic | 25.0% |
| ! | TTACAGAGATAACTCATATT+AGG | + | tig0023613:64420-64439 | None:intergenic | 25.0% |
| ! | AAATTCTGAACAATGCATAT+AGG | + | tig0023613:64625-64644 | None:intergenic | 25.0% |
| !! | ATGCATTGTTCAGAATTTTA+TGG | - | tig0023613:64627-64646 | Msa1410120:intron | 25.0% |
| ! | ACAATTGTACAGAGATTTAT+TGG | - | tig0023613:65150-65169 | Msa1410120:CDS | 25.0% |
| ! | CAATTGTACAGAGATTTATT+GGG | - | tig0023613:65151-65170 | Msa1410120:CDS | 25.0% |
| !! | GAGTTTTACAGATTTTATTC+TGG | + | tig0023613:65196-65215 | None:intergenic | 25.0% |
| ! | AAAATCTGTAAAACTCTTGA+AGG | - | tig0023613:65200-65219 | Msa1410120:CDS | 25.0% |
| !!! | GTTTGATATGATTTTGGTTA+AGG | - | tig0023613:65302-65321 | Msa1410120:CDS | 25.0% |
| !! | TGTTTGGAGTTTATAAAGAA+TGG | - | tig0023613:65351-65370 | Msa1410120:CDS | 25.0% |
| !! | GTTTGGAGTTTATAAAGAAT+GGG | - | tig0023613:65352-65371 | Msa1410120:CDS | 25.0% |
| !!! | TCGATAAGTTTTTCAAATGA+AGG | + | tig0023613:65580-65599 | None:intergenic | 25.0% |
| !! | CTAACAATTTTAGATACATG+TGG | + | tig0023613:65750-65769 | None:intergenic | 25.0% |
| !! | CACATGTATCTAAAATTGTT+AGG | - | tig0023613:65748-65767 | Msa1410120:CDS | 25.0% |
| !! | CATGTATCTAAAATTGTTAG+GGG | - | tig0023613:65750-65769 | Msa1410120:CDS | 25.0% |
| !! | ATGTATCTAAAATTGTTAGG+GGG | - | tig0023613:65751-65770 | Msa1410120:CDS | 25.0% |
| !!! | TATTGTAACTCTTTTTTCGT+TGG | - | tig0023613:65780-65799 | Msa1410120:CDS | 25.0% |
| !!! | ACTTGAGTTGATCAAAATAT+TGG | - | tig0023613:65915-65934 | Msa1410120:CDS | 25.0% |
| ! | TTGATCAAAATATTGGCATT+TGG | - | tig0023613:65922-65941 | Msa1410120:CDS | 25.0% |
| ! | TGATCAAAATATTGGCATTT+GGG | - | tig0023613:65923-65942 | Msa1410120:CDS | 25.0% |
| !!! | GTTGTTTCTTTTTCTGACTA+TGG | + | tig0023613:62039-62058 | None:intergenic | 30.0% |
| AAGTGGTTCTTACAAGAATA+AGG | + | tig0023613:62064-62083 | None:intergenic | 30.0% | |
| ! | GTTGTTATTAGTTGAAGAAG+TGG | + | tig0023613:62081-62100 | None:intergenic | 30.0% |
| ! | TGTTTTCTGTAATGAGATGT+AGG | + | tig0023613:62128-62147 | None:intergenic | 30.0% |
| !! | TGGAATTTTGAAGGAAAAGA+GGG | + | tig0023613:62273-62292 | None:intergenic | 30.0% |
| ! | GTTTTTCTGTGGAATTTTGA+AGG | + | tig0023613:62282-62301 | None:intergenic | 30.0% |
| AGAAAGGCAATCTTGAATAA+GGG | + | tig0023613:62312-62331 | None:intergenic | 30.0% | |
| AACCCCAATTTCTACATAAT+TGG | - | tig0023613:62339-62358 | Msa1410120:intron | 30.0% | |
| ACCCCAATTTCTACATAATT+GGG | - | tig0023613:62340-62359 | Msa1410120:intron | 30.0% | |
| TCCCAATTATGTAGAAATTG+GGG | + | tig0023613:62344-62363 | None:intergenic | 30.0% | |
| ! | GAAAGCTTGGATTTGAATTT+TGG | + | tig0023613:62377-62396 | None:intergenic | 30.0% |
| CCTAAAAATCTCAACTTTAC+GGG | + | tig0023613:62474-62493 | None:intergenic | 30.0% | |
| CCCTAAAAATCTCAACTTTA+CGG | + | tig0023613:62475-62494 | None:intergenic | 30.0% | |
| ! | CCGTAAAGTTGAGATTTTTA+GGG | - | tig0023613:62472-62491 | Msa1410120:intron | 30.0% |
| !! | CGTAAAGTTGAGATTTTTAG+GGG | - | tig0023613:62473-62492 | Msa1410120:intron | 30.0% |
| !!! | TGATGTTTTGATAAGGGTTT+TGG | - | tig0023613:62511-62530 | Msa1410120:intron | 30.0% |
| !!! | TGGTGTCGTTAATTTTCTTA+TGG | - | tig0023613:62577-62596 | Msa1410120:intron | 30.0% |
| TTCCTAAGGATGAAATTGAT+AGG | - | tig0023613:62609-62628 | Msa1410120:intron | 30.0% | |
| TCCTAAGGATGAAATTGATA+GGG | - | tig0023613:62610-62629 | Msa1410120:intron | 30.0% | |
| ! | GCAATTAAAGAGAGGATTTT+TGG | - | tig0023613:62830-62849 | Msa1410120:CDS | 30.0% |
| AAATTCACACCTAAGTATGA+AGG | + | tig0023613:63055-63074 | None:intergenic | 30.0% | |
| TACTCAATCACATTGTATCT+AGG | + | tig0023613:63094-63113 | None:intergenic | 30.0% | |
| TTGTAAAATCTAAGCCTAGT+TGG | + | tig0023613:63172-63191 | None:intergenic | 30.0% | |
| GATCTATGAATACTGTTAGT+TGG | - | tig0023613:63373-63392 | Msa1410120:intron | 30.0% | |
| AATACTGTTAGTTGGATGAA+TGG | - | tig0023613:63381-63400 | Msa1410120:intron | 30.0% | |
| !!! | TGCATAAACTTGTTTTGCAT+AGG | + | tig0023613:63455-63474 | None:intergenic | 30.0% |
| GAGTTACAACATTCATTAGT+TGG | - | tig0023613:63756-63775 | Msa1410120:intron | 30.0% | |
| GTTACAACATTCATTAGTTG+GGG | - | tig0023613:63758-63777 | Msa1410120:intron | 30.0% | |
| GCAAATGAATGAATTTGGAA+TGG | + | tig0023613:64272-64291 | None:intergenic | 30.0% | |
| ACTCATATTAGGGAAAAGAA+GGG | + | tig0023613:64409-64428 | None:intergenic | 30.0% | |
| AACTCATATTAGGGAAAAGA+AGG | + | tig0023613:64410-64429 | None:intergenic | 30.0% | |
| !! | TCTGCTATTTGATCATGTTT+TGG | + | tig0023613:64806-64825 | None:intergenic | 30.0% |
| TATTCTCTAATGATTGCAGA+TGG | - | tig0023613:65031-65050 | Msa1410120:CDS | 30.0% | |
| !!! | TATGATTTTGGTTAAGGTCT+TGG | - | tig0023613:65308-65327 | Msa1410120:CDS | 30.0% |
| GGAAGGAAAAAAAGTAAACT+CGG | - | tig0023613:65442-65461 | Msa1410120:CDS | 30.0% | |
| GAAGGAAAAAAAGTAAACTC+GGG | - | tig0023613:65443-65462 | Msa1410120:CDS | 30.0% | |
| CTAAACCTCTGCAATAAATT+TGG | + | tig0023613:65667-65686 | None:intergenic | 30.0% | |
| ! | GTTTCTTTTTCTGACTATGG+TGG | + | tig0023613:62036-62055 | None:intergenic | 35.0% |
| !! | AGATGTAGGTGGATTAGAAA+TGG | + | tig0023613:62114-62133 | None:intergenic | 35.0% |
| TTTCTGTAATGAGATGTAGG+TGG | + | tig0023613:62125-62144 | None:intergenic | 35.0% | |
| !! | TGGTTTTTGGAGAGGAAATT+CGG | + | tig0023613:62203-62222 | None:intergenic | 35.0% |
| ! | ATTGAAGAGGAAGTGGTTTT+TGG | + | tig0023613:62216-62235 | None:intergenic | 35.0% |
| !! | AATTTTGAAGGAAAAGAGGG+TGG | + | tig0023613:62270-62289 | None:intergenic | 35.0% |
| !! | GTGGAATTTTGAAGGAAAAG+AGG | + | tig0023613:62274-62293 | None:intergenic | 35.0% |
| ! | AGGGAAATTAGGTTTTTCTG+TGG | + | tig0023613:62293-62312 | None:intergenic | 35.0% |
| CAGAAAGGCAATCTTGAATA+AGG | + | tig0023613:62313-62332 | None:intergenic | 35.0% | |
| ! | CTTTACGGGAAATTTCAAGT+GGG | + | tig0023613:62460-62479 | None:intergenic | 35.0% |
| ACTTTACGGGAAATTTCAAG+TGG | + | tig0023613:62461-62480 | None:intergenic | 35.0% | |
| ! | CCCGTAAAGTTGAGATTTTT+AGG | - | tig0023613:62471-62490 | Msa1410120:intron | 35.0% |
| !! | GTTGAGATTTTTAGGGGTTT+AGG | - | tig0023613:62479-62498 | Msa1410120:intron | 35.0% |
| !!! | TGTTTTGATAAGGGTTTTGG+AGG | - | tig0023613:62514-62533 | Msa1410120:intron | 35.0% |
| ACCCTATCAATTTCATCCTT+AGG | + | tig0023613:62614-62633 | None:intergenic | 35.0% | |
| GGTTGTTAGATTGTTTCCTA+GGG | - | tig0023613:62631-62650 | Msa1410120:CDS | 35.0% | |
| ! | TAGATTGTTTCCTAGGGTTT+TGG | - | tig0023613:62637-62656 | Msa1410120:CDS | 35.0% |
| ! | AGATTGTTTCCTAGGGTTTT+GGG | - | tig0023613:62638-62657 | Msa1410120:CDS | 35.0% |
| ! | ATTCATGAGTTGAGGAGTTT+GGG | - | tig0023613:62692-62711 | Msa1410120:intron | 35.0% |
| !! | TAAAGAGAGGATTTTTGGAG+AGG | - | tig0023613:62835-62854 | Msa1410120:CDS | 35.0% |
| !! | AAAGAGAGGATTTTTGGAGA+GGG | - | tig0023613:62836-62855 | Msa1410120:CDS | 35.0% |
| !!! | TTTTGAAGTGAAGTTGAGAG+TGG | - | tig0023613:62874-62893 | Msa1410120:intron | 35.0% |
| CAACACCATATTTCATCCTT+TGG | + | tig0023613:63015-63034 | None:intergenic | 35.0% | |
| CATGAAGTTCCTTCATACTT+AGG | - | tig0023613:63043-63062 | Msa1410120:intron | 35.0% | |
| ! | TTGAAAGGAAAAGGTGCAAT+TGG | - | tig0023613:63115-63134 | Msa1410120:intron | 35.0% |
| ! | TGAAAGGAAAAGGTGCAATT+GGG | - | tig0023613:63116-63135 | Msa1410120:intron | 35.0% |
| TTTGAGGAAACTTATGTGGT+TGG | + | tig0023613:63297-63316 | None:intergenic | 35.0% | |
| TCAAGATGTGAAGAACATGA+AGG | - | tig0023613:63321-63340 | Msa1410120:intron | 35.0% | |
| GAGTTGTACTAAGCAAAGAT+AGG | - | tig0023613:63475-63494 | Msa1410120:intron | 35.0% | |
| !! | ACTCAAAGTACTGCAGAAAA+AGG | - | tig0023613:63520-63539 | Msa1410120:intron | 35.0% |
| AACATGCGAATTCACAGATT+TGG | + | tig0023613:63608-63627 | None:intergenic | 35.0% | |
| TGAATGTTGTAACTCCCTAA+TGG | + | tig0023613:63751-63770 | None:intergenic | 35.0% | |
| TGTTGATACTCAACAGTGTA+TGG | - | tig0023613:63785-63804 | Msa1410120:intron | 35.0% | |
| ATCCACAATTGCATCACAAT+CGG | - | tig0023613:63895-63914 | Msa1410120:intron | 35.0% | |
| AAACTGTTTCAAGGGCAATT+TGG | - | tig0023613:64209-64228 | Msa1410120:CDS | 35.0% | |
| AACTGTTTCAAGGGCAATTT+GGG | - | tig0023613:64210-64229 | Msa1410120:CDS | 35.0% | |
| ATTGAAAGAACATGACTGCA+TGG | + | tig0023613:64372-64391 | None:intergenic | 35.0% | |
| TAGGATTGACTACCTAGATT+TGG | - | tig0023613:64854-64873 | Msa1410120:CDS | 35.0% | |
| AGGATTGACTACCTAGATTT+GGG | - | tig0023613:64855-64874 | Msa1410120:CDS | 35.0% | |
| ! | CTATACTGATTGTCATAGCA+AGG | - | tig0023613:65087-65106 | Msa1410120:CDS | 35.0% |
| ATATCAACTTCCTTTGTCCA+TGG | - | tig0023613:65401-65420 | Msa1410120:CDS | 35.0% | |
| CTATTGAACAATTGCGATTC+TGG | - | tig0023613:65476-65495 | Msa1410120:CDS | 35.0% | |
| ! | TATTCCATGCCTTCTCTTTT+TGG | - | tig0023613:65545-65564 | Msa1410120:CDS | 35.0% |
| AAGATCCAACCAAAAAGAGA+AGG | + | tig0023613:65557-65576 | None:intergenic | 35.0% | |
| ATGAATCTACTTGCATCTCT+AGG | - | tig0023613:65614-65633 | Msa1410120:CDS | 35.0% | |
| TGAATCTACTTGCATCTCTA+GGG | - | tig0023613:65615-65634 | Msa1410120:CDS | 35.0% | |
| GACTTCCAAATTTATTGCAG+AGG | - | tig0023613:65659-65678 | Msa1410120:CDS | 35.0% | |
| TTATTGCAGAGGTTTAGTCT+TGG | - | tig0023613:65670-65689 | Msa1410120:CDS | 35.0% | |
| !! | GTTTAGTCTTGGAGTTATGT+TGG | - | tig0023613:65681-65700 | Msa1410120:CDS | 35.0% |
| !!! | ACTCTTTTTTCGTTGGTGTT+AGG | - | tig0023613:65787-65806 | Msa1410120:CDS | 35.0% |
| ATGCTTTCAGAGTTCTTGAA+AGG | - | tig0023613:65830-65849 | Msa1410120:CDS | 35.0% | |
| TGCTTTCAGAGTTCTTGAAA+GGG | - | tig0023613:65831-65850 | Msa1410120:CDS | 35.0% | |
| !! | TGTAGGTGGATTAGAAATGG+TGG | + | tig0023613:62111-62130 | None:intergenic | 40.0% |
| GCTAATCTCTTCCAATCCTT+CGG | - | tig0023613:62158-62177 | Msa1410120:intron | 40.0% | |
| AATTCGGAAGAGAAGAGGAA+GGG | + | tig0023613:62187-62206 | None:intergenic | 40.0% | |
| AAATTCGGAAGAGAAGAGGA+AGG | + | tig0023613:62188-62207 | None:intergenic | 40.0% | |
| TCAAGATTGCCTTTCTGTGT+TGG | - | tig0023613:62316-62335 | Msa1410120:intron | 40.0% | |
| ! | AACAAGTTGGCGATCATCAA+CGG | + | tig0023613:62410-62429 | None:intergenic | 40.0% |
| TGTAGAACAACGCAACAAGT+TGG | + | tig0023613:62423-62442 | None:intergenic | 40.0% | |
| ATTTCCCATTGCAGTTGTCA+TGG | - | tig0023613:62538-62557 | Msa1410120:intron | 40.0% | |
| TTTCCCATTGCAGTTGTCAT+GGG | - | tig0023613:62539-62558 | Msa1410120:intron | 40.0% | |
| ATGGGGGAAACTCAAATTGT+TGG | - | tig0023613:62557-62576 | Msa1410120:intron | 40.0% | |
| ! | TATGGAATTTGGGGTTCCTA+AGG | - | tig0023613:62595-62614 | Msa1410120:intron | 40.0% |
| GGGTTGTTAGATTGTTTCCT+AGG | - | tig0023613:62630-62649 | Msa1410120:CDS | 40.0% | |
| !!! | TTTCCTAGGGTTTTGGGATT+TGG | - | tig0023613:62644-62663 | Msa1410120:CDS | 40.0% |
| ATTCCAAATCCCAAAACCCT+AGG | + | tig0023613:62650-62669 | None:intergenic | 40.0% | |
| !!! | GGTTTTGGGATTTGGAATTG+AGG | - | tig0023613:62652-62671 | Msa1410120:intron | 40.0% |
| ! | TGGGATTTGGAATTGAGGAT+AGG | - | tig0023613:62657-62676 | Msa1410120:intron | 40.0% |
| !! | AGCTGTTGATTCATGAGTTG+AGG | - | tig0023613:62684-62703 | Msa1410120:intron | 40.0% |
| ! | GATTCATGAGTTGAGGAGTT+TGG | - | tig0023613:62691-62710 | Msa1410120:intron | 40.0% |
| ! | TTCATGAGTTGAGGAGTTTG+GGG | - | tig0023613:62693-62712 | Msa1410120:intron | 40.0% |
| ! | TGGAGATTGGGGAATTTTCA+CGG | - | tig0023613:62771-62790 | Msa1410120:CDS | 40.0% |
| ! | TGTTGCAGAGTTTGAAATGC+AGG | - | tig0023613:62804-62823 | Msa1410120:CDS | 40.0% |
| ! | GTTGCAGAGTTTGAAATGCA+GGG | - | tig0023613:62805-62824 | Msa1410120:CDS | 40.0% |
| !! | TTTTTGGAGAGGGTTTGGTT+AGG | - | tig0023613:62846-62865 | Msa1410120:CDS | 40.0% |
| !! | TTTTGGAGAGGGTTTGGTTA+GGG | - | tig0023613:62847-62866 | Msa1410120:CDS | 40.0% |
| !! | TTGAGAGTGGATTGTTTGTG+TGG | - | tig0023613:62887-62906 | Msa1410120:intron | 40.0% |
| ! | GAACCAAGGTTGATTGCTTA+CGG | - | tig0023613:62953-62972 | Msa1410120:intron | 40.0% |
| AAACCGTAAGCAATCAACCT+TGG | + | tig0023613:62959-62978 | None:intergenic | 40.0% | |
| ! | AAGGTTGATTGCTTACGGTT+TGG | - | tig0023613:62958-62977 | Msa1410120:intron | 40.0% |
| ! | TGGGTTTGAAGTTGGATTGA+AGG | - | tig0023613:63135-63154 | Msa1410120:intron | 40.0% |
| AGGACATCATCAAACCAACT+AGG | - | tig0023613:63155-63174 | Msa1410120:intron | 40.0% | |
| !!! | ATATGGGAGATTTTCGGGTA+AGG | - | tig0023613:63228-63247 | Msa1410120:intron | 40.0% |
| GTTAAAAGTAAGCATCCAGC+TGG | - | tig0023613:63256-63275 | Msa1410120:intron | 40.0% | |
| CCACATAAGTTTCCTCAAAC+CGG | - | tig0023613:63298-63317 | Msa1410120:intron | 40.0% | |
| CATGTTCTTCACATCTTGAC+CGG | + | tig0023613:63320-63339 | None:intergenic | 40.0% | |
| GAAGAACATGAAGGCTTTCA+TGG | - | tig0023613:63330-63349 | Msa1410120:intron | 40.0% | |
| TCATGGATTCAATGCTGTAG+TGG | - | tig0023613:63347-63366 | Msa1410120:intron | 40.0% | |
| CGTGTTCAAGCTCAAAATCA+TGG | + | tig0023613:63408-63427 | None:intergenic | 40.0% | |
| TGCAGTACTTTGAGTAATGC+AGG | + | tig0023613:63515-63534 | None:intergenic | 40.0% | |
| AGTACTGCAGAAAAAGGAGA+AGG | - | tig0023613:63526-63545 | Msa1410120:intron | 40.0% | |
| ! | TGTTTGGAACAGTAGAGTTG+AGG | - | tig0023613:63725-63744 | Msa1410120:intron | 40.0% |
| ! | TACCGATTGTGATGCAATTG+TGG | + | tig0023613:63900-63919 | None:intergenic | 40.0% |
| TTGCATCACAATCGGTATTC+TGG | - | tig0023613:63903-63922 | Msa1410120:intron | 40.0% | |
| CGCTATTATCCTCATTGTAG+CGG | + | tig0023613:64074-64093 | None:intergenic | 40.0% | |
| CGCTACAATGAGGATAATAG+CGG | - | tig0023613:64072-64091 | Msa1410120:intron | 40.0% | |
| ACGGCGCAAATGAATGAATT+TGG | + | tig0023613:64277-64296 | None:intergenic | 40.0% | |
| TTAGGGCTCACAAACTTGAA+CGG | + | tig0023613:64296-64315 | None:intergenic | 40.0% | |
| ! | GAGGAAGAAGAAAAGCATGA+TGG | + | tig0023613:64500-64519 | None:intergenic | 40.0% |
| AGGTAGTCAATCCTAGATAG+CGG | + | tig0023613:64849-64868 | None:intergenic | 40.0% | |
| AACCCCAAAAGCTATCTCAA+GGG | - | tig0023613:64891-64910 | Msa1410120:CDS | 40.0% | |
| TAACTTTAGCCAGTTGTCCA+TGG | + | tig0023613:65421-65440 | None:intergenic | 40.0% | |
| ATGGACAACTGGCTAAAGTT+AGG | - | tig0023613:65420-65439 | Msa1410120:CDS | 40.0% | |
| TGGACAACTGGCTAAAGTTA+GGG | - | tig0023613:65421-65440 | Msa1410120:CDS | 40.0% | |
| TTGAACAATTGCGATTCTGG+AGG | - | tig0023613:65479-65498 | Msa1410120:CDS | 40.0% | |
| TGAACAATTGCGATTCTGGA+GGG | - | tig0023613:65480-65499 | Msa1410120:CDS | 40.0% | |
| ! | AGAGAAGGCATGGAATATCT+CGG | + | tig0023613:65542-65561 | None:intergenic | 40.0% |
| ! | CGATGGTTGACTTAAGAAAG+TGG | - | tig0023613:65706-65725 | Msa1410120:CDS | 40.0% |
| !! | AAGTGGATTGCAACAAGAAG+TGG | - | tig0023613:65723-65742 | Msa1410120:CDS | 40.0% |
| TCTTGAAAGGGTGACATTAC+AGG | - | tig0023613:65843-65862 | Msa1410120:CDS | 40.0% | |
| ! | CCAGAATTTGTTCCAAAGCT+CGG | - | tig0023613:65892-65911 | Msa1410120:CDS | 40.0% |
| ! | TATTGGCATTTGGGCTTTTC+AGG | - | tig0023613:65932-65951 | Msa1410120:CDS | 40.0% |
| ! | ATTGGCATTTGGGCTTTTCA+GGG | - | tig0023613:65933-65952 | Msa1410120:CDS | 40.0% |
| GAGGAAATTCGGAAGAGAAG+AGG | + | tig0023613:62192-62211 | None:intergenic | 45.0% | |
| !! | AGAGGAAGTGGTTTTTGGAG+AGG | + | tig0023613:62211-62230 | None:intergenic | 45.0% |
| ! | GATCGGTATTGAAGAGGAAG+TGG | + | tig0023613:62223-62242 | None:intergenic | 45.0% |
| GGTAAGAGATTGACGAAGGT+GGG | + | tig0023613:62249-62268 | None:intergenic | 45.0% | |
| TGGTAAGAGATTGACGAAGG+TGG | + | tig0023613:62250-62269 | None:intergenic | 45.0% | |
| ATTGGGGTTCCAACACAGAA+AGG | + | tig0023613:62328-62347 | None:intergenic | 45.0% | |
| ! | ACAAGTTGGCGATCATCAAC+GGG | + | tig0023613:62409-62428 | None:intergenic | 45.0% |
| TTCCCATTGCAGTTGTCATG+GGG | - | tig0023613:62540-62559 | Msa1410120:intron | 45.0% | |
| ! | TGTTAGGGATCCAAGGGTTT+TGG | - | tig0023613:62745-62764 | Msa1410120:intron | 45.0% |
| ! | GTTAGGGATCCAAGGGTTTT+GGG | - | tig0023613:62746-62765 | Msa1410120:intron | 45.0% |
| ATCTCCATTCCCAAAACCCT+TGG | + | tig0023613:62758-62777 | None:intergenic | 45.0% | |
| !!! | AGGGTTTTGGGAATGGAGAT+TGG | - | tig0023613:62758-62777 | Msa1410120:intron | 45.0% |
| !!! | GGGTTTTGGGAATGGAGATT+GGG | - | tig0023613:62759-62778 | Msa1410120:intron | 45.0% |
| !!! | GGTTTTGGGAATGGAGATTG+GGG | - | tig0023613:62760-62779 | Msa1410120:intron | 45.0% |
| !! | GAGGATTTTTGGAGAGGGTT+TGG | - | tig0023613:62841-62860 | Msa1410120:CDS | 45.0% |
| ! | GTGGATTGTTTGTGTGGTCA+CGG | - | tig0023613:62893-62912 | Msa1410120:intron | 45.0% |
| ! | ACACCTTCAAAGCATCCCTA+CGG | + | tig0023613:62925-62944 | None:intergenic | 45.0% |
| !! | TGCTTTGAAGGTGTTGTGGA+AGG | - | tig0023613:62931-62950 | Msa1410120:intron | 45.0% |
| ! | GTTGATTGCTTACGGTTTGG+AGG | - | tig0023613:62961-62980 | Msa1410120:intron | 45.0% |
| ! | GGTGCAATTGGGTTTGAAGT+TGG | - | tig0023613:63127-63146 | Msa1410120:intron | 45.0% |
| ! | CCGGTTTGAGGAAACTTATG+TGG | + | tig0023613:63301-63320 | None:intergenic | 45.0% |
| !! | TTCACATCTTGACCGGTTTG+AGG | + | tig0023613:63313-63332 | None:intergenic | 45.0% |
| ATTCCATGAGCTACTGCTTG+TGG | + | tig0023613:63706-63725 | None:intergenic | 45.0% | |
| GCAGTAGCTCATGGAATGTT+TGG | - | tig0023613:63709-63728 | Msa1410120:intron | 45.0% | |
| ACAGTAGAGTTGAGGCCATT+AGG | - | tig0023613:63733-63752 | Msa1410120:intron | 45.0% | |
| CAGTAGAGTTGAGGCCATTA+GGG | - | tig0023613:63734-63753 | Msa1410120:intron | 45.0% | |
| GTGATGCAATTGTGGATGCA+AGG | + | tig0023613:63892-63911 | None:intergenic | 45.0% | |
| CAGAGCGATGAAAACGGTTA+GGG | + | tig0023613:64313-64332 | None:intergenic | 45.0% | |
| ACAGAGCGATGAAAACGGTT+AGG | + | tig0023613:64314-64333 | None:intergenic | 45.0% | |
| ACGGAACAGAGCGATGAAAA+CGG | + | tig0023613:64319-64338 | None:intergenic | 45.0% | |
| CGATGGGTGCAAAACTTGAA+CGG | + | tig0023613:64338-64357 | None:intergenic | 45.0% | |
| GAAAGAACATGACTGCATGG+TGG | + | tig0023613:64369-64388 | None:intergenic | 45.0% | |
| ! | ATAGCGGGGATAGCTTATAG+CGG | + | tig0023613:64833-64852 | None:intergenic | 45.0% |
| ATAAGCTATCCCCGCTATCT+AGG | - | tig0023613:64835-64854 | Msa1410120:CDS | 45.0% | |
| GTAGTCAATCCTAGATAGCG+GGG | + | tig0023613:64847-64866 | None:intergenic | 45.0% | |
| GGTAGTCAATCCTAGATAGC+GGG | + | tig0023613:64848-64867 | None:intergenic | 45.0% | |
| TGACTACCTAGATTTGGGCT+AGG | - | tig0023613:64860-64879 | Msa1410120:CDS | 45.0% | |
| CTCAAACCTAGCCCAAATCT+AGG | + | tig0023613:64869-64888 | None:intergenic | 45.0% | |
| CAACCCCAAAAGCTATCTCA+AGG | - | tig0023613:64890-64909 | Msa1410120:CDS | 45.0% | |
| ACCCCAAAAGCTATCTCAAG+GGG | - | tig0023613:64892-64911 | Msa1410120:CDS | 45.0% | |
| ! | GTTGGAGCGGAAAACTTGTT+TGG | - | tig0023613:65335-65354 | Msa1410120:CDS | 45.0% |
| TTCCTTTGTCCATGGACAAC+TGG | - | tig0023613:65409-65428 | Msa1410120:CDS | 45.0% | |
| CAACTGGCTAAAGTTAGGGA+AGG | - | tig0023613:65425-65444 | Msa1410120:CDS | 45.0% | |
| TGGAGGGTTTGCATTCGATA+TGG | - | tig0023613:65496-65515 | Msa1410120:CDS | 45.0% | |
| CCAACCAAAAAGAGAAGGCA+TGG | + | tig0023613:65552-65571 | None:intergenic | 45.0% | |
| !! | CCATGCCTTCTCTTTTTGGT+TGG | - | tig0023613:65549-65568 | Msa1410120:CDS | 45.0% |
| ! | ATCTACTTGCATCTCTAGGG+AGG | - | tig0023613:65618-65637 | Msa1410120:CDS | 45.0% |
| ! | TAGGGAGGCATATCTTGTTC+TGG | - | tig0023613:65633-65652 | Msa1410120:CDS | 45.0% |
| TTGGAGTTATGTTGGTGCGA+TGG | - | tig0023613:65689-65708 | Msa1410120:CDS | 45.0% | |
| GTGACATTACAGGAAGCCAA+TGG | - | tig0023613:65853-65872 | Msa1410120:CDS | 45.0% | |
| !! | GGAACAAATTCTGGAATCCG+TGG | + | tig0023613:65886-65905 | None:intergenic | 45.0% |
| !! | CCGAGCTTTGGAACAAATTC+TGG | + | tig0023613:65895-65914 | None:intergenic | 45.0% |
| ATCAACTCAAGTCCGAGCTT+TGG | + | tig0023613:65907-65926 | None:intergenic | 45.0% | |
| !! | ATGTTTATAAATAATAATAT+AGG | - | tig0023613:63932-63951 | Msa1410120:intron | 5.0% |
| AGGAAGGGAAACCGAAGGAT+TGG | + | tig0023613:62172-62191 | None:intergenic | 50.0% | |
| AGAAGAGGAAGGGAAACCGA+AGG | + | tig0023613:62177-62196 | None:intergenic | 50.0% | |
| ! | GGGATGGATCGGTATTGAAG+AGG | + | tig0023613:62229-62248 | None:intergenic | 50.0% |
| TTGACGAAGGTGGGATGGAT+CGG | + | tig0023613:62240-62259 | None:intergenic | 50.0% | |
| AGAGATTGACGAAGGTGGGA+TGG | + | tig0023613:62245-62264 | None:intergenic | 50.0% | |
| GGGTGGTAAGAGATTGACGA+AGG | + | tig0023613:62253-62272 | None:intergenic | 50.0% | |
| !! | CGGGGAAGCATTAGAAAGCT+TGG | + | tig0023613:62390-62409 | None:intergenic | 50.0% |
| ! | CAAGTTGGCGATCATCAACG+GGG | + | tig0023613:62408-62427 | None:intergenic | 50.0% |
| TCCCATTGCAGTTGTCATGG+GGG | - | tig0023613:62541-62560 | Msa1410120:intron | 50.0% | |
| TCCCCCATGACAACTGCAAT+GGG | + | tig0023613:62545-62564 | None:intergenic | 50.0% | |
| TTCCCCCATGACAACTGCAA+TGG | + | tig0023613:62546-62565 | None:intergenic | 50.0% | |
| GGAGGTTGTTAGGGATCCAA+GGG | - | tig0023613:62739-62758 | Msa1410120:intron | 50.0% | |
| !!! | GGATCCAAGGGTTTTGGGAA+TGG | - | tig0023613:62751-62770 | Msa1410120:intron | 50.0% |
| ! | GCAGAGTTTGAAATGCAGGG+AGG | - | tig0023613:62808-62827 | Msa1410120:CDS | 50.0% |
| GCAGGGAGGCAATTAAAGAG+AGG | - | tig0023613:62822-62841 | Msa1410120:CDS | 50.0% | |
| TGGTCACGGTTTGATCCGTA+GGG | - | tig0023613:62907-62926 | Msa1410120:intron | 50.0% | |
| GATCCGTAGGGATGCTTTGA+AGG | - | tig0023613:62919-62938 | Msa1410120:intron | 50.0% | |
| !! | GGGATGCTTTGAAGGTGTTG+TGG | - | tig0023613:62927-62946 | Msa1410120:intron | 50.0% |
| ! | AGGTGTTGTGGAAGGAACCA+AGG | - | tig0023613:62939-62958 | Msa1410120:intron | 50.0% |
| GTAAGCATCCAGCTGGACTT+TGG | - | tig0023613:63263-63282 | Msa1410120:intron | 50.0% | |
| AACAGCTTCCAAAGTCCAGC+TGG | + | tig0023613:63274-63293 | None:intergenic | 50.0% | |
| ! | TCTCGCGCTATTGACTACGT+AGG | + | tig0023613:64014-64033 | None:intergenic | 50.0% |
| AGCGGAGCAGTTAACGATAG+TGG | - | tig0023613:64090-64109 | Msa1410120:intron | 50.0% | |
| ATGACTGCATGGTGGCTGTA+CGG | + | tig0023613:64361-64380 | None:intergenic | 50.0% | |
| TAGCGGGGATAGCTTATAGC+GGG | + | tig0023613:64832-64851 | None:intergenic | 50.0% | |
| ! | CCCCCTTGAGATAGCTTTTG+GGG | + | tig0023613:64896-64915 | None:intergenic | 50.0% |
| CCCCAAAAGCTATCTCAAGG+GGG | - | tig0023613:64893-64912 | Msa1410120:CDS | 50.0% | |
| ! | CCCCCCTTGAGATAGCTTTT+GGG | + | tig0023613:64897-64916 | None:intergenic | 50.0% |
| CCCAAAAGCTATCTCAAGGG+GGG | - | tig0023613:64894-64913 | Msa1410120:CDS | 50.0% | |
| ! | TCCCCCCTTGAGATAGCTTT+TGG | + | tig0023613:64898-64917 | None:intergenic | 50.0% |
| AAAAGCTATCTCAAGGGGGG+AGG | - | tig0023613:64897-64916 | Msa1410120:CDS | 50.0% | |
| GACTCTTCCAAAGCTGCTGT+GGG | + | tig0023613:65059-65078 | None:intergenic | 50.0% | |
| AGACTCTTCCAAAGCTGCTG+TGG | + | tig0023613:65060-65079 | None:intergenic | 50.0% | |
| GGTTAAGGTCTTGGCTCAGT+TGG | - | tig0023613:65317-65336 | Msa1410120:CDS | 50.0% | |
| AGCCAGTTGTCCATGGACAA+AGG | + | tig0023613:65414-65433 | None:intergenic | 50.0% | |
| !! | AATTCTGGAATCCGTGGCAC+AGG | + | tig0023613:65880-65899 | None:intergenic | 50.0% |
| !! | TTTGGGGTTTTCCAGCCGAG+AGG | - | tig0023613:62709-62728 | Msa1410120:intron | 55.0% |
| ! | GTTTTCCAGCCGAGAGGTCA+GGG | - | tig0023613:62715-62734 | Msa1410120:intron | 55.0% |
| CGGAGGTTGTTAGGGATCCA+AGG | - | tig0023613:62738-62757 | Msa1410120:intron | 55.0% | |
| GTGGTCACGGTTTGATCCGT+AGG | - | tig0023613:62906-62925 | Msa1410120:intron | 55.0% | |
| CCATGAGCTACTGCTTGTGG+TGG | + | tig0023613:63703-63722 | None:intergenic | 55.0% | |
| CCACCACAAGCAGTAGCTCA+TGG | - | tig0023613:63700-63719 | Msa1410120:intron | 55.0% | |
| TAGCGGCAGAGTGGAGTAGA+GGG | - | tig0023613:64045-64064 | Msa1410120:intron | 55.0% | |
| ! | TTAACGATAGTGGCCGCTCC+AGG | - | tig0023613:64100-64119 | Msa1410120:intron | 55.0% |
| GATGGATCCCACAGCAGCTT+TGG | - | tig0023613:65049-65068 | Msa1410120:CDS | 55.0% | |
| AGGTCTTGGCTCAGTTGGAG+CGG | - | tig0023613:65322-65341 | Msa1410120:CDS | 55.0% | |
| AAGCCAATGGACCTGTGCCA+CGG | - | tig0023613:65866-65885 | Msa1410120:CDS | 55.0% | |
| AATCCGTGGCACAGGTCCAT+TGG | + | tig0023613:65872-65891 | None:intergenic | 55.0% | |
| ! | GGTTTTCCAGCCGAGAGGTC+AGG | - | tig0023613:62714-62733 | Msa1410120:intron | 60.0% |
| AGGTCAGGGCGGAGGTTGTT+AGG | - | tig0023613:62729-62748 | Msa1410120:intron | 60.0% | |
| GGTCAGGGCGGAGGTTGTTA+GGG | - | tig0023613:62730-62749 | Msa1410120:intron | 60.0% | |
| ACTCCACTCTGCCGCTACAG+CGG | + | tig0023613:64042-64061 | None:intergenic | 60.0% | |
| GTAGCGGCAGAGTGGAGTAG+AGG | - | tig0023613:64044-64063 | Msa1410120:intron | 60.0% | |
| AGAGGGTCGCCGCTACAATG+AGG | - | tig0023613:64062-64081 | Msa1410120:intron | 60.0% | |
| CGCCAAGATCTCACCTGGAG+CGG | + | tig0023613:64116-64135 | None:intergenic | 60.0% | |
| CGCTCCAGGTGAGATCTTGG+CGG | - | tig0023613:64114-64133 | Msa1410120:intron | 60.0% | |
| CAGGTGAGATCTTGGCGGAG+CGG | - | tig0023613:64119-64138 | Msa1410120:intron | 60.0% | |
| AGGTGAGATCTTGGCGGAGC+GGG | - | tig0023613:64120-64139 | Msa1410120:intron | 60.0% | |
| CATGGTGGCTGTACGGCGAT+GGG | + | tig0023613:64354-64373 | None:intergenic | 60.0% | |
| TTCCAGCCGAGAGGTCAGGG+CGG | - | tig0023613:62718-62737 | Msa1410120:intron | 65.0% | |
| CAACCTCCGCCCTGACCTCT+CGG | + | tig0023613:62727-62746 | None:intergenic | 65.0% | |
| GCGAGATAGCGCCGCTGTAG+CGG | - | tig0023613:64028-64047 | Msa1410120:intron | 65.0% | |
| GGCCGCTCCAGGTGAGATCT+TGG | - | tig0023613:64111-64130 | Msa1410120:intron | 65.0% | |
| CGCTCCGCCAAGATCTCACC+TGG | + | tig0023613:64121-64140 | None:intergenic | 65.0% | |
| GGTGAGATCTTGGCGGAGCG+GGG | - | tig0023613:64121-64140 | Msa1410120:intron | 65.0% | |
| GCATGGTGGCTGTACGGCGA+TGG | + | tig0023613:64355-64374 | None:intergenic | 65.0% | |
| CTCCGCCCTGACCTCTCGGC+TGG | + | tig0023613:62723-62742 | None:intergenic | 75.0% | |
| CAGCCGAGAGGTCAGGGCGG+AGG | - | tig0023613:62721-62740 | Msa1410120:intron | 75.0% | |
| GCGCCGCTGTAGCGGCAGAG+TGG | - | tig0023613:64036-64055 | Msa1410120:intron | 75.0% | |
| ! | GCGGAGCGGGGTCGCAGAGC+AGG | - | tig0023613:64133-64152 | Msa1410120:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023613 | gene | 62020 | 65972 | 62020 | ID=Msa1410120;Name=Msa1410120 |
| tig0023613 | mRNA | 62020 | 65972 | 62020 | ID=Msa1410120-mRNA-1;Parent=Msa1410120;Name=Msa1410120-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.25|0|1|1|1|5|0|614 |
| tig0023613 | exon | 64630 | 65972 | 64630 | ID=Msa1410120-mRNA-1:exon:26368;Parent=Msa1410120-mRNA-1 |
| tig0023613 | exon | 64186 | 64387 | 64186 | ID=Msa1410120-mRNA-1:exon:26367;Parent=Msa1410120-mRNA-1 |
| tig0023613 | exon | 62771 | 62887 | 62771 | ID=Msa1410120-mRNA-1:exon:26366;Parent=Msa1410120-mRNA-1 |
| tig0023613 | exon | 62619 | 62668 | 62619 | ID=Msa1410120-mRNA-1:exon:26365;Parent=Msa1410120-mRNA-1 |
| tig0023613 | exon | 62020 | 62152 | 62020 | ID=Msa1410120-mRNA-1:exon:26364;Parent=Msa1410120-mRNA-1 |
| tig0023613 | CDS | 64630 | 65972 | 64630 | ID=Msa1410120-mRNA-1:cds;Parent=Msa1410120-mRNA-1 |
| tig0023613 | CDS | 64186 | 64387 | 64186 | ID=Msa1410120-mRNA-1:cds;Parent=Msa1410120-mRNA-1 |
| tig0023613 | CDS | 62771 | 62887 | 62771 | ID=Msa1410120-mRNA-1:cds;Parent=Msa1410120-mRNA-1 |
| tig0023613 | CDS | 62619 | 62668 | 62619 | ID=Msa1410120-mRNA-1:cds;Parent=Msa1410120-mRNA-1 |
| tig0023613 | CDS | 62020 | 62152 | 62020 | ID=Msa1410120-mRNA-1:cds;Parent=Msa1410120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
