Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0327130 | KEH38164.1 | 77.471 | 435 | 39 | 4 | 14 | 392 | 1 | 432 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0327130 | sp|Q9C6A1|MTEFE_ARATH | 41.629 | 442 | 198 | 4 | 6 | 391 | 7 | 444 | 5.67e-108 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0327130 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0289270 | Msa0327130 | 0.835402 | 1.713089e-56 | -8.615850e-47 |
| Msa0327130 | Msa1410120 | 0.834862 | 2.344167e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0327130 | MtrunA17_Chr2g0308761 | 77.011 | 435 | 41 | 4 | 14 | 392 | 1 | 432 | 0.0 | 645 |
| Msa0327130 | MtrunA17_Chr2g0308431 | 58.242 | 91 | 6 | 2 | 308 | 368 | 1 | 89 | 4.83e-26 | 102 |
| Msa0327130 | MtrunA17_Chr4g0020831 | 58.242 | 91 | 6 | 2 | 308 | 368 | 1 | 89 | 3.35e-25 | 100 |
| Msa0327130 | MtrunA17_Chr2g0308421 | 84.615 | 52 | 7 | 1 | 471 | 521 | 1 | 52 | 1.05e-19 | 82.8 |
| Msa0327130 | MtrunA17_Chr1g0160961 | 63.953 | 86 | 28 | 3 | 462 | 546 | 655 | 738 | 1.13e-19 | 93.6 |
| Msa0327130 | MtrunA17_Chr5g0419891 | 53.922 | 102 | 29 | 4 | 461 | 546 | 515 | 614 | 1.63e-16 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0327130 | AT1G74120.1 | 41.629 | 442 | 198 | 4 | 6 | 391 | 7 | 444 | 5.76e-109 | 333 |
Find 129 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGCTTGGATTTGAATTT+TGG | 0.098657 | 2_4:+38620458 | None:intergenic |
| AACCCCAATTTCTACATAAT+TGG | 0.109235 | 2_4:-38620493 | Msa0327130:CDS |
| ATTCCCAATTATGTAGAAAT+TGG | 0.124209 | 2_4:+38620489 | None:intergenic |
| ACAATTGTACAGAGATTTAT+TGG | 0.191689 | 2_4:-38617699 | Msa0327130:CDS |
| CCGAGCTTTGGAACAAATTC+TGG | 0.197617 | 2_4:+38616961 | None:intergenic |
| AATCTTGAATAAGGGAAATT+AGG | 0.210110 | 2_4:+38620531 | None:intergenic |
| AAATTTCAAGTGGGTTTAAA+TGG | 0.215029 | 2_4:+38620384 | None:intergenic |
| CAGAAAGGCAATCTTGAATA+AGG | 0.235623 | 2_4:+38620522 | None:intergenic |
| TGTTAGGGATCCAAGGGTTT+TGG | 0.241406 | 2_4:-38620088 | Msa0327130:CDS |
| GTTTCCTAGGGTTTGGGATT+TGG | 0.251150 | 2_4:-38620189 | Msa0327130:intron |
| ATTCATGAGTTGAGGAGTTT+GGG | 0.255104 | 2_4:-38620141 | Msa0327130:CDS |
| ACTTGAGTTGATCAAAATAT+TGG | 0.275160 | 2_4:-38616938 | Msa0327130:CDS |
| ATTTCTACATAATTGGGAAT+TGG | 0.292126 | 2_4:-38620486 | Msa0327130:CDS |
| TCTTGAAAGGGTGACATTAC+AGG | 0.292157 | 2_4:-38617010 | Msa0327130:CDS |
| TTGATCAAAATATTGGCATT+TGG | 0.301587 | 2_4:-38616931 | Msa0327130:CDS |
| TTCCCAATTATGTAGAAATT+GGG | 0.304182 | 2_4:+38620490 | None:intergenic |
| CAACACCATATTTCATCCTT+TGG | 0.306291 | 2_4:+38619821 | None:intergenic |
| ACAATAGAGTTGAGGCCATT+AGG | 0.306678 | 2_4:-38619116 | Msa0327130:CDS |
| TAGATTGTTTCCTAGGGTTT+GGG | 0.307236 | 2_4:-38620195 | Msa0327130:intron |
| AGGTCAGGGCGGAGGTTGTT+AGG | 0.309694 | 2_4:-38620104 | Msa0327130:CDS |
| TTAATCCAAAGGATGAAATA+TGG | 0.315058 | 2_4:-38619826 | Msa0327130:CDS |
| GATTCATGAGTTGAGGAGTT+TGG | 0.321130 | 2_4:-38620142 | Msa0327130:CDS |
| TGATCAAAATATTGGCATTT+GGG | 0.327176 | 2_4:-38616930 | Msa0327130:CDS |
| TTTCTACATAATTGGGAATT+GGG | 0.332347 | 2_4:-38620485 | Msa0327130:CDS |
| CAATAGAGTTGAGGCCATTA+GGG | 0.340610 | 2_4:-38619115 | Msa0327130:CDS |
| GAAGAACATGAAGGCTTTCA+TGG | 0.341403 | 2_4:-38619519 | Msa0327130:CDS |
| AACATGCGAATTCACAGATT+TGG | 0.348169 | 2_4:+38619244 | None:intergenic |
| AAGTGGTTCTTACAAGAATA+AGG | 0.352405 | 2_4:+38620771 | None:intergenic |
| CATGAAGTTCCTTCATACTT+AGG | 0.364333 | 2_4:-38619790 | Msa0327130:CDS |
| GTTGGAGCGGAAAACTTGTT+TGG | 0.369327 | 2_4:-38617514 | Msa0327130:CDS |
| AAAATCTGTAAAACTCTTGA+AGG | 0.378482 | 2_4:-38617649 | Msa0327130:intron |
| GCAGTAGCTCATGGAATGTT+TGG | 0.379837 | 2_4:-38619140 | Msa0327130:CDS |
| AGTTACAACATTCATTAGTT+GGG | 0.385822 | 2_4:-38619092 | Msa0327130:CDS |
| ATCAACTCAAGTCCGAGCTT+TGG | 0.389686 | 2_4:+38616949 | None:intergenic |
| ACCCCAATTTCTACATAATT+GGG | 0.391543 | 2_4:-38620492 | Msa0327130:CDS |
| AAGGTTGATTGCTTACGGTT+TGG | 0.397737 | 2_4:-38619875 | Msa0327130:CDS |
| GATCCGTAGGGATGCTTTGA+AGG | 0.398149 | 2_4:-38619914 | Msa0327130:CDS |
| TGTTTGGAGTTTATAAAGAA+TGG | 0.398840 | 2_4:-38617498 | Msa0327130:CDS |
| GAGTTACAACATTCATTAGT+TGG | 0.403178 | 2_4:-38619093 | Msa0327130:CDS |
| ACAAGTTGGCGATCATCAAC+GGG | 0.417533 | 2_4:+38620426 | None:intergenic |
| GTAAGCATCCAGCTGGACTT+TGG | 0.424175 | 2_4:-38619586 | Msa0327130:CDS |
| GCTAATCTCTTCCAATCCTT+CGG | 0.426075 | 2_4:-38620674 | Msa0327130:CDS |
| CATGTTCTTCACATCTTGAC+CGG | 0.428680 | 2_4:+38619532 | None:intergenic |
| CACAATCTGTCCAATGGGGT+TGG | 0.434427 | 2_4:-38620825 | None:intergenic |
| CGGGGAAGCATTAGAAAGCT+TGG | 0.440265 | 2_4:+38620445 | None:intergenic |
| CCAGAATTTGTTCCAAAGCT+CGG | 0.441601 | 2_4:-38616961 | Msa0327130:CDS |
| TTCACATCTTGACCGGTTTG+AGG | 0.446780 | 2_4:+38619539 | None:intergenic |
| ACAATCTGTCCAATGGGGTT+GGG | 0.449876 | 2_4:-38620824 | None:intergenic |
| CAGCCGAGAGGTCAGGGCGG+AGG | 0.450679 | 2_4:-38620112 | Msa0327130:CDS |
| CAATTGTACAGAGATTTATT+GGG | 0.454992 | 2_4:-38617698 | Msa0327130:CDS |
| GAACCAAGGTTGATTGCTTA+CGG | 0.455676 | 2_4:-38619880 | Msa0327130:CDS |
| TGAATGTTGTAACTCCCTAA+TGG | 0.462308 | 2_4:+38619101 | None:intergenic |
| GTTGTTATTAGTTGAAGAAG+TGG | 0.465877 | 2_4:+38620754 | None:intergenic |
| TCAAGATTGCCTTTCTGTGT+TGG | 0.468440 | 2_4:-38620516 | Msa0327130:CDS |
| ATCTCCATTCCCAAAACCCT+TGG | 0.472530 | 2_4:+38620078 | None:intergenic |
| GGTTAAGGTCTTGGCTCAGT+TGG | 0.473212 | 2_4:-38617532 | Msa0327130:intron |
| CTCCGCCCTGACCTCTCGGC+TGG | 0.473380 | 2_4:+38620113 | None:intergenic |
| GTGGTCACGGTTTGATCCGT+AGG | 0.474464 | 2_4:-38619927 | Msa0327130:CDS |
| GTTTGGAGTTTATAAAGAAT+GGG | 0.474872 | 2_4:-38617497 | Msa0327130:intron |
| ATTTCCCATTGCAGTTGTCA+TGG | 0.478760 | 2_4:-38620294 | Msa0327130:CDS |
| TTTCCCATTGCAGTTGTCAT+GGG | 0.479957 | 2_4:-38620293 | Msa0327130:CDS |
| GGTCAGGGCGGAGGTTGTTA+GGG | 0.481020 | 2_4:-38620103 | Msa0327130:CDS |
| GATCGGTATTGAAGAGGAAG+TGG | 0.483347 | 2_4:+38620612 | None:intergenic |
| GTTGATTGCTTACGGTTTGG+AGG | 0.485609 | 2_4:-38619872 | Msa0327130:CDS |
| AGAAAGGCAATCTTGAATAA+GGG | 0.487800 | 2_4:+38620523 | None:intergenic |
| AGGAAGGGAAACCGAAGGAT+TGG | 0.491372 | 2_4:+38620663 | None:intergenic |
| TGGGATTTGGAATTGAGGAT+AGG | 0.491709 | 2_4:-38620176 | Msa0327130:CDS |
| GGTAAGAGATTGACGAAGGT+GGG | 0.494203 | 2_4:+38620586 | None:intergenic |
| AGATGTAGGTGGATTAGAAA+TGG | 0.507251 | 2_4:+38620721 | None:intergenic |
| TGCTTTCAGAGTTCTTGAAA+GGG | 0.508227 | 2_4:-38617022 | Msa0327130:intron |
| CGGAGGTTGTTAGGGATCCA+AGG | 0.508723 | 2_4:-38620095 | Msa0327130:CDS |
| TGGTAAGAGATTGACGAAGG+TGG | 0.510918 | 2_4:+38620585 | None:intergenic |
| ATGCTTTCAGAGTTCTTGAA+AGG | 0.511397 | 2_4:-38617023 | Msa0327130:intron |
| CCACAGAAGTTTCCTCAAAC+CGG | 0.516850 | 2_4:-38619551 | Msa0327130:CDS |
| AACAAGTTGGCGATCATCAA+CGG | 0.518122 | 2_4:+38620425 | None:intergenic |
| GGGTTTGGGATTTGGAATTG+AGG | 0.518568 | 2_4:-38620181 | Msa0327130:CDS |
| AATCCGTGGCACAGGTCCAT+TGG | 0.518651 | 2_4:+38616984 | None:intergenic |
| TTCATGAGTTGAGGAGTTTG+GGG | 0.519712 | 2_4:-38620140 | Msa0327130:CDS |
| TGTAGGTGGATTAGAAATGG+TGG | 0.521617 | 2_4:+38620724 | None:intergenic |
| TTTGAGGAAACTTCTGTGGT+TGG | 0.524496 | 2_4:+38619555 | None:intergenic |
| AACAGCTTCCAAAGTCCAGC+TGG | 0.524566 | 2_4:+38619578 | None:intergenic |
| AATTCTGGAATCCGTGGCAC+AGG | 0.526371 | 2_4:+38616976 | None:intergenic |
| AAATTCGGAAGAGAAGAGGA+AGG | 0.533269 | 2_4:+38620647 | None:intergenic |
| GTTACAACATTCATTAGTTG+GGG | 0.534750 | 2_4:-38619091 | Msa0327130:CDS |
| TCCCAATTATGTAGAAATTG+GGG | 0.539066 | 2_4:+38620491 | None:intergenic |
| GTTAAAAGTAAGCATCCAGC+TGG | 0.546625 | 2_4:-38619593 | Msa0327130:CDS |
| TTGACGAAGGTGGGATGGAT+CGG | 0.551796 | 2_4:+38620595 | None:intergenic |
| GTGGATTGTTTGTGTGGTCA+CGG | 0.552758 | 2_4:-38619940 | Msa0327130:CDS |
| GTTGCAGAGTTTGAAATGCA+CGG | 0.552800 | 2_4:-38620028 | Msa0327130:CDS |
| ATGGTGGAACCCAACCCCAT+TGG | 0.554824 | 2_4:+38620815 | None:intergenic |
| CCACCACAAGCAGTAGCTCA+TGG | 0.559836 | 2_4:-38619149 | Msa0327130:CDS |
| TGTTGATACTCAACAGTGTA+TGG | 0.561591 | 2_4:-38619064 | Msa0327130:intron |
| ATTGGGGTTCCAACACAGAA+AGG | 0.562957 | 2_4:+38620507 | None:intergenic |
| AGAGATTGACGAAGGTGGGA+TGG | 0.563472 | 2_4:+38620590 | None:intergenic |
| CAACCTCCGCCCTGACCTCT+CGG | 0.563699 | 2_4:+38620109 | None:intergenic |
| CCATGAGCTACTGCTTGTGG+TGG | 0.567964 | 2_4:+38619149 | None:intergenic |
| GAGGAAATTCGGAAGAGAAG+AGG | 0.568672 | 2_4:+38620643 | None:intergenic |
| TTGAGAGTGGATTGTTTGTG+TGG | 0.573095 | 2_4:-38619946 | Msa0327130:CDS |
| TTCCCATTGCAGTTGTCATG+GGG | 0.575497 | 2_4:-38620292 | Msa0327130:CDS |
| AAATTCACACCTAAGTATGA+AGG | 0.579741 | 2_4:+38619781 | None:intergenic |
| TGCTTTGAAGGTGTTGTGGA+AGG | 0.580553 | 2_4:-38619902 | Msa0327130:CDS |
| AGCTGTTGATTCATGAGTTG+AGG | 0.589517 | 2_4:-38620149 | Msa0327130:CDS |
| AATTCGGAAGAGAAGAGGAA+GGG | 0.592899 | 2_4:+38620648 | None:intergenic |
| CCGGTTTGAGGAAACTTCTG+TGG | 0.592977 | 2_4:+38619551 | None:intergenic |
| GGGATGGATCGGTATTGAAG+AGG | 0.598546 | 2_4:+38620606 | None:intergenic |
| GGAGGTTGTTAGGGATCCAA+GGG | 0.599772 | 2_4:-38620094 | Msa0327130:CDS |
| GGGTGGTAAGAGATTGACGA+AGG | 0.601379 | 2_4:+38620582 | None:intergenic |
| AGGTCTTGGCTCAGTTGGAG+CGG | 0.602503 | 2_4:-38617527 | Msa0327130:CDS |
| TGTAGAACAACGCAACAAGT+TGG | 0.609072 | 2_4:+38620412 | None:intergenic |
| AAACCGTAAGCAATCAACCT+TGG | 0.613186 | 2_4:+38619877 | None:intergenic |
| GGGATGCTTTGAAGGTGTTG+TGG | 0.613256 | 2_4:-38619906 | Msa0327130:CDS |
| AAGCCAATGGACCTGTGCCA+CGG | 0.617584 | 2_4:-38616987 | Msa0327130:CDS |
| GGAACAAATTCTGGAATCCG+TGG | 0.622732 | 2_4:+38616970 | None:intergenic |
| TGTTTGGAACAATAGAGTTG+AGG | 0.628296 | 2_4:-38619124 | Msa0327130:CDS |
| ACTTTACGGGAAATTTCAAG+TGG | 0.628377 | 2_4:+38620374 | None:intergenic |
| TCCCATTGCAGTTGTCATGG+GGG | 0.632407 | 2_4:-38620291 | Msa0327130:CDS |
| ATTCCATGAGCTACTGCTTG+TGG | 0.636151 | 2_4:+38619146 | None:intergenic |
| TGGTCACGGTTTGATCCGTA+GGG | 0.637002 | 2_4:-38619926 | Msa0327130:CDS |
| CTTTACGGGAAATTTCAAGT+GGG | 0.640015 | 2_4:+38620375 | None:intergenic |
| GTGACATTACAGGAAGCCAA+TGG | 0.643356 | 2_4:-38617000 | Msa0327130:CDS |
| AGAAGAGGAAGGGAAACCGA+AGG | 0.647325 | 2_4:+38620658 | None:intergenic |
| ACACCTTCAAAGCATCCCTA+CGG | 0.648597 | 2_4:+38619911 | None:intergenic |
| TCAAGATGTGAAGAACATGA+AGG | 0.654568 | 2_4:-38619528 | Msa0327130:CDS |
| TTTCTGTAATGAGATGTAGG+TGG | 0.659285 | 2_4:+38620710 | None:intergenic |
| GCACGGAGGCAATTAAAGAG+AGG | 0.662756 | 2_4:-38620011 | Msa0327130:CDS |
| TTCCAGCCGAGAGGTCAGGG+CGG | 0.702811 | 2_4:-38620115 | Msa0327130:CDS |
| AGGTGTTGTGGAAGGAACCA+AGG | 0.704640 | 2_4:-38619894 | Msa0327130:CDS |
| CAAGTTGGCGATCATCAACG+GGG | 0.759642 | 2_4:+38620427 | None:intergenic |
| GCAGAGTTTGAAATGCACGG+AGG | 0.772069 | 2_4:-38620025 | Msa0327130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTGATTTAAAATTAATTTT+GGG | + | chr2_4:38618433-38618452 | None:intergenic | 10.0% |
| !!! | TTGTGATTTAAAATTAATTT+TGG | + | chr2_4:38618434-38618453 | None:intergenic | 10.0% |
| !!! | AAATTAATTTTAAATCACAA+AGG | - | chr2_4:38618434-38618453 | Msa0327130:intron | 10.0% |
| !!! | AATTAATTTTAAATCACAAA+GGG | - | chr2_4:38618435-38618454 | Msa0327130:intron | 10.0% |
| !!! | AAAAATATTTTAACAGAAAA+AGG | + | chr2_4:38620120-38620139 | None:intergenic | 10.0% |
| !!! | TTAATTTTCTTATGGAATTT+GGG | - | chr2_4:38617468-38617487 | Msa0327130:intron | 15.0% |
| !! | AAGAATTATAAAAATGTTAG+TGG | - | chr2_4:38618532-38618551 | Msa0327130:intron | 15.0% |
| !!! | TTGAAACAGTTTAATTTTTA+GGG | + | chr2_4:38619067-38619086 | None:intergenic | 15.0% |
| !! | TAAAAATTAAACTGTTTCAA+GGG | - | chr2_4:38619067-38619086 | Msa0327130:CDS | 15.0% |
| !! | TATAAAAAAATCTTAAAGTG+AGG | + | chr2_4:38619385-38619404 | None:intergenic | 15.0% |
| !! | AACATATAATATGAACTTAA+GGG | + | chr2_4:38619524-38619543 | None:intergenic | 15.0% |
| !!! | ATGTTTTTCTCATAAAATTT+GGG | + | chr2_4:38619793-38619812 | None:intergenic | 15.0% |
| !!! | AATGTTTTTCTCATAAAATT+TGG | + | chr2_4:38619794-38619813 | None:intergenic | 15.0% |
| !!! | GTTAATTTTCTTATGGAATT+TGG | - | chr2_4:38617467-38617486 | Msa0327130:intron | 20.0% |
| !!! | TAATTTTCTTATGGAATTTG+GGG | - | chr2_4:38617469-38617488 | Msa0327130:intron | 20.0% |
| !! | CAGAATGTGAAAAAATATAT+GGG | - | chr2_4:38618078-38618097 | Msa0327130:intron | 20.0% |
| !!! | AAAAATATATGGGAGATTTT+CGG | - | chr2_4:38618088-38618107 | Msa0327130:intron | 20.0% |
| !! | AATACGTAAAAGACAAAATA+GGG | + | chr2_4:38618829-38618848 | None:intergenic | 20.0% |
| !! | AAATACGTAAAAGACAAAAT+AGG | + | chr2_4:38618830-38618849 | None:intergenic | 20.0% |
| !!! | CTTGAAACAGTTTAATTTTT+AGG | + | chr2_4:38619068-38619087 | None:intergenic | 20.0% |
| !! | CTAAAAATTAAACTGTTTCA+AGG | - | chr2_4:38619066-38619085 | Msa0327130:CDS | 20.0% |
| !! | GAACATATAATATGAACTTA+AGG | + | chr2_4:38619525-38619544 | None:intergenic | 20.0% |
| !!! | ACTAATGTTTGATATGATTT+TGG | - | chr2_4:38620162-38620181 | Msa0327130:CDS | 20.0% |
| !!! | TTGATATAAATTTCAAGTCA+TGG | + | chr2_4:38620254-38620273 | None:intergenic | 20.0% |
| !!! | ACATGTATCTAAAATTGTTA+GGG | - | chr2_4:38620615-38620634 | Msa0327130:CDS | 20.0% |
| !!! | TATTTTAACTCTTTTTTCGT+TGG | - | chr2_4:38620646-38620665 | Msa0327130:CDS | 20.0% |
| !!! | GTTGTTTCTTTTTCTAACTA+TGG | + | chr2_4:38616922-38616941 | None:intergenic | 25.0% |
| ! | AATCTTGAATAAGGGAAATT+AGG | + | chr2_4:38617187-38617206 | None:intergenic | 25.0% |
| ! | TTCCCAATTATGTAGAAATT+GGG | + | chr2_4:38617228-38617247 | None:intergenic | 25.0% |
| ! | ATTCCCAATTATGTAGAAAT+TGG | + | chr2_4:38617229-38617248 | None:intergenic | 25.0% |
| ! | ATTTCTACATAATTGGGAAT+TGG | - | chr2_4:38617229-38617248 | Msa0327130:intron | 25.0% |
| ! | TTTCTACATAATTGGGAATT+GGG | - | chr2_4:38617230-38617249 | Msa0327130:intron | 25.0% |
| !! | AAATTTCAAGTGGGTTTAAA+TGG | + | chr2_4:38617334-38617353 | None:intergenic | 25.0% |
| !!! | TTTCTGATGATGTTTTGATA+AGG | - | chr2_4:38617387-38617406 | Msa0327130:intron | 25.0% |
| !!! | TTCTGATGATGTTTTGATAA+GGG | - | chr2_4:38617388-38617407 | Msa0327130:intron | 25.0% |
| !! | AGATTGAGTTTTTAATCCAA+AGG | - | chr2_4:38617878-38617897 | Msa0327130:intron | 25.0% |
| ! | TTAATCCAAAGGATGAAATA+TGG | - | chr2_4:38617889-38617908 | Msa0327130:intron | 25.0% |
| ! | ATTGAGTATTTGAAAGGAAA+AGG | - | chr2_4:38617972-38617991 | Msa0327130:intron | 25.0% |
| !!! | ATTTTTTCACATTCTGGATA+AGG | + | chr2_4:38618074-38618093 | None:intergenic | 25.0% |
| !!! | CCATATATTTTTTCACATTC+TGG | + | chr2_4:38618080-38618099 | None:intergenic | 25.0% |
| ! | CCAGAATGTGAAAAAATATA+TGG | - | chr2_4:38618077-38618096 | Msa0327130:intron | 25.0% |
| !! | AAAATATATGGGAGATTTTC+GGG | - | chr2_4:38618089-38618108 | Msa0327130:intron | 25.0% |
| ! | AGTTACAACATTCATTAGTT+GGG | - | chr2_4:38618623-38618642 | Msa0327130:intron | 25.0% |
| !!! | TTTGCACTTTTTTTTTTGTC+TGG | - | chr2_4:38618690-38618709 | Msa0327130:intron | 25.0% |
| !!! | ACCACTATATTGTTTTAATG+TGG | - | chr2_4:38619034-38619053 | Msa0327130:intron | 25.0% |
| ! | TCCACATTAAAACAATATAG+TGG | + | chr2_4:38619038-38619057 | None:intergenic | 25.0% |
| ! | TACAGAGATAACTCATATTA+GGG | + | chr2_4:38619285-38619304 | None:intergenic | 25.0% |
| ! | TTACAGAGATAACTCATATT+AGG | + | chr2_4:38619286-38619305 | None:intergenic | 25.0% |
| ! | AAATTCTGAACAATGCATAT+AGG | + | chr2_4:38619491-38619510 | None:intergenic | 25.0% |
| !! | ATGCATTGTTCAGAATTTTA+TGG | - | chr2_4:38619493-38619512 | Msa0327130:intron | 25.0% |
| ! | ACAATTGTACAGAGATTTAT+TGG | - | chr2_4:38620016-38620035 | Msa0327130:CDS | 25.0% |
| ! | CAATTGTACAGAGATTTATT+GGG | - | chr2_4:38620017-38620036 | Msa0327130:CDS | 25.0% |
| !! | GAGTTTTACAGATTTTATTC+TGG | + | chr2_4:38620062-38620081 | None:intergenic | 25.0% |
| ! | AAAATCTGTAAAACTCTTGA+AGG | - | chr2_4:38620066-38620085 | Msa0327130:CDS | 25.0% |
| !!! | GTTTGATATGATTTTGGTTA+AGG | - | chr2_4:38620168-38620187 | Msa0327130:CDS | 25.0% |
| !! | TGTTTGGAGTTTATAAAGAA+TGG | - | chr2_4:38620217-38620236 | Msa0327130:intron | 25.0% |
| !! | GTTTGGAGTTTATAAAGAAT+GGG | - | chr2_4:38620218-38620237 | Msa0327130:intron | 25.0% |
| !!! | TCGATAAGTTTTTCAAATGA+AGG | + | chr2_4:38620446-38620465 | None:intergenic | 25.0% |
| !! | CTAACAATTTTAGATACATG+TGG | + | chr2_4:38620616-38620635 | None:intergenic | 25.0% |
| !! | CACATGTATCTAAAATTGTT+AGG | - | chr2_4:38620614-38620633 | Msa0327130:CDS | 25.0% |
| !! | CATGTATCTAAAATTGTTAG+GGG | - | chr2_4:38620616-38620635 | Msa0327130:CDS | 25.0% |
| !! | ATGTATCTAAAATTGTTAGG+GGG | - | chr2_4:38620617-38620636 | Msa0327130:CDS | 25.0% |
| !!! | ACTTGAGTTGATCAAAATAT+TGG | - | chr2_4:38620777-38620796 | Msa0327130:CDS | 25.0% |
| ! | TTGATCAAAATATTGGCATT+TGG | - | chr2_4:38620784-38620803 | Msa0327130:CDS | 25.0% |
| ! | TGATCAAAATATTGGCATTT+GGG | - | chr2_4:38620785-38620804 | Msa0327130:CDS | 25.0% |
| ! | GTTTCTTTTTCTAACTATGG+TGG | + | chr2_4:38616919-38616938 | None:intergenic | 30.0% |
| AAGTGGTTCTTACAAGAATA+AGG | + | chr2_4:38616947-38616966 | None:intergenic | 30.0% | |
| ! | GTTGTTATTAGTTGAAGAAG+TGG | + | chr2_4:38616964-38616983 | None:intergenic | 30.0% |
| ! | TGTTTTCTGTAATGAGATGT+AGG | + | chr2_4:38617011-38617030 | None:intergenic | 30.0% |
| !! | TGGAATTTTGAAGGAAAAGA+GGG | + | chr2_4:38617156-38617175 | None:intergenic | 30.0% |
| ! | GTTTTTCTGTGGAATTTTGA+AGG | + | chr2_4:38617165-38617184 | None:intergenic | 30.0% |
| AGAAAGGCAATCTTGAATAA+GGG | + | chr2_4:38617195-38617214 | None:intergenic | 30.0% | |
| AACCCCAATTTCTACATAAT+TGG | - | chr2_4:38617222-38617241 | Msa0327130:intron | 30.0% | |
| ACCCCAATTTCTACATAATT+GGG | - | chr2_4:38617223-38617242 | Msa0327130:intron | 30.0% | |
| TCCCAATTATGTAGAAATTG+GGG | + | chr2_4:38617227-38617246 | None:intergenic | 30.0% | |
| ! | GAAAGCTTGGATTTGAATTT+TGG | + | chr2_4:38617260-38617279 | None:intergenic | 30.0% |
| CCTAAAAATCTCAACTTTAC+GGG | + | chr2_4:38617357-38617376 | None:intergenic | 30.0% | |
| CCCTAAAAATCTCAACTTTA+CGG | + | chr2_4:38617358-38617377 | None:intergenic | 30.0% | |
| ! | CCGTAAAGTTGAGATTTTTA+GGG | - | chr2_4:38617355-38617374 | Msa0327130:intron | 30.0% |
| !! | CGTAAAGTTGAGATTTTTAG+GGG | - | chr2_4:38617356-38617375 | Msa0327130:intron | 30.0% |
| !!! | TGATGTTTTGATAAGGGTTT+TGG | - | chr2_4:38617394-38617413 | Msa0327130:intron | 30.0% |
| !!! | TGGTGTCGTTAATTTTCTTA+TGG | - | chr2_4:38617460-38617479 | Msa0327130:intron | 30.0% |
| TTCCTAAGGATGAAATTGAT+AGG | - | chr2_4:38617492-38617511 | Msa0327130:intron | 30.0% | |
| TCCTAAGGATGAAATTGATA+GGG | - | chr2_4:38617493-38617512 | Msa0327130:intron | 30.0% | |
| ! | GCAATTAAAGAGAGGATTTT+TGG | - | chr2_4:38617712-38617731 | Msa0327130:CDS | 30.0% |
| AAATTCACACCTAAGTATGA+AGG | + | chr2_4:38617937-38617956 | None:intergenic | 30.0% | |
| ! | ACTTAGGTGTGAATTTTGAA+AGG | - | chr2_4:38617941-38617960 | Msa0327130:intron | 30.0% |
| !! | GTGTGAATTTTGAAAGGAAA+AGG | - | chr2_4:38617947-38617966 | Msa0327130:intron | 30.0% |
| AAGGTGATTGAGTATTTGAA+AGG | - | chr2_4:38617966-38617985 | Msa0327130:intron | 30.0% | |
| TTGTAAAATCTAAGCCTAGT+TGG | + | chr2_4:38618038-38618057 | None:intergenic | 30.0% | |
| GATCTATGAATACTGTTAGT+TGG | - | chr2_4:38618239-38618258 | Msa0327130:intron | 30.0% | |
| AATACTGTTAGTTGGATGAA+TGG | - | chr2_4:38618247-38618266 | Msa0327130:intron | 30.0% | |
| !!! | TGCATAAACTTGTTTTGCAT+AGG | + | chr2_4:38618321-38618340 | None:intergenic | 30.0% |
| GAGTTACAACATTCATTAGT+TGG | - | chr2_4:38618622-38618641 | Msa0327130:intron | 30.0% | |
| GTTACAACATTCATTAGTTG+GGG | - | chr2_4:38618624-38618643 | Msa0327130:intron | 30.0% | |
| ACTCATATTAGGGAAAAGAA+AGG | + | chr2_4:38619275-38619294 | None:intergenic | 30.0% | |
| !! | TCTGCTATTTGATCATGTTT+TGG | + | chr2_4:38619672-38619691 | None:intergenic | 30.0% |
| TATTCTCTAATGATTGCAGA+TGG | - | chr2_4:38619897-38619916 | Msa0327130:CDS | 30.0% | |
| !!! | TATGATTTTGGTTAAGGTCT+TGG | - | chr2_4:38620174-38620193 | Msa0327130:CDS | 30.0% |
| GGAAGGAAAAAAAGTAAACT+CGG | - | chr2_4:38620308-38620327 | Msa0327130:CDS | 30.0% | |
| GAAGGAAAAAAAGTAAACTC+GGG | - | chr2_4:38620309-38620328 | Msa0327130:CDS | 30.0% | |
| CTAAACCTCTGCAATAAATT+TGG | + | chr2_4:38620533-38620552 | None:intergenic | 30.0% | |
| !! | AGATGTAGGTGGATTAGAAA+TGG | + | chr2_4:38616997-38617016 | None:intergenic | 35.0% |
| TTTCTGTAATGAGATGTAGG+TGG | + | chr2_4:38617008-38617027 | None:intergenic | 35.0% | |
| !! | TGGTTTTTGGAGAGGAAATT+CGG | + | chr2_4:38617086-38617105 | None:intergenic | 35.0% |
| ! | ATTGAAGAGGAAGTGGTTTT+TGG | + | chr2_4:38617099-38617118 | None:intergenic | 35.0% |
| !! | AATTTTGAAGGAAAAGAGGG+TGG | + | chr2_4:38617153-38617172 | None:intergenic | 35.0% |
| !! | GTGGAATTTTGAAGGAAAAG+AGG | + | chr2_4:38617157-38617176 | None:intergenic | 35.0% |
| ! | AGGGAAATTAGGTTTTTCTG+TGG | + | chr2_4:38617176-38617195 | None:intergenic | 35.0% |
| CAGAAAGGCAATCTTGAATA+AGG | + | chr2_4:38617196-38617215 | None:intergenic | 35.0% | |
| ! | CTTTACGGGAAATTTCAAGT+GGG | + | chr2_4:38617343-38617362 | None:intergenic | 35.0% |
| ACTTTACGGGAAATTTCAAG+TGG | + | chr2_4:38617344-38617363 | None:intergenic | 35.0% | |
| ! | CCCGTAAAGTTGAGATTTTT+AGG | - | chr2_4:38617354-38617373 | Msa0327130:intron | 35.0% |
| !! | GTTGAGATTTTTAGGGGTTT+AGG | - | chr2_4:38617362-38617381 | Msa0327130:intron | 35.0% |
| !!! | TGTTTTGATAAGGGTTTTGG+AGG | - | chr2_4:38617397-38617416 | Msa0327130:intron | 35.0% |
| ACCCTATCAATTTCATCCTT+AGG | + | chr2_4:38617497-38617516 | None:intergenic | 35.0% | |
| GGTTGTTAGATTGTTTCCTA+GGG | - | chr2_4:38617514-38617533 | Msa0327130:CDS | 35.0% | |
| TTAGATTGTTTCCTAGGGTT+TGG | - | chr2_4:38617519-38617538 | Msa0327130:CDS | 35.0% | |
| TAGATTGTTTCCTAGGGTTT+GGG | - | chr2_4:38617520-38617539 | Msa0327130:CDS | 35.0% | |
| ! | ATTCATGAGTTGAGGAGTTT+GGG | - | chr2_4:38617574-38617593 | Msa0327130:intron | 35.0% |
| !! | TAAAGAGAGGATTTTTGGAG+AGG | - | chr2_4:38617717-38617736 | Msa0327130:CDS | 35.0% |
| !! | AAAGAGAGGATTTTTGGAGA+GGG | - | chr2_4:38617718-38617737 | Msa0327130:CDS | 35.0% |
| !!! | TTTTGAAGTGAAGTTGAGAG+TGG | - | chr2_4:38617756-38617775 | Msa0327130:intron | 35.0% |
| CAACACCATATTTCATCCTT+TGG | + | chr2_4:38617897-38617916 | None:intergenic | 35.0% | |
| CATGAAGTTCCTTCATACTT+AGG | - | chr2_4:38617925-38617944 | Msa0327130:intron | 35.0% | |
| ! | TTGAAAGGAAAAGGTGCAAT+TGG | - | chr2_4:38617981-38618000 | Msa0327130:intron | 35.0% |
| ! | TGAAAGGAAAAGGTGCAATT+GGG | - | chr2_4:38617982-38618001 | Msa0327130:intron | 35.0% |
| TCAAGATGTGAAGAACATGA+AGG | - | chr2_4:38618187-38618206 | Msa0327130:intron | 35.0% | |
| !! | ACTCAAAGTACTGCAGAAAA+AGG | - | chr2_4:38618386-38618405 | Msa0327130:intron | 35.0% |
| !! | CTCAAAGTACTGCAGAAAAA+GGG | - | chr2_4:38618387-38618406 | Msa0327130:intron | 35.0% |
| !! | TCAAAGTACTGCAGAAAAAG+GGG | - | chr2_4:38618388-38618407 | Msa0327130:intron | 35.0% |
| AACATGCGAATTCACAGATT+TGG | + | chr2_4:38618474-38618493 | None:intergenic | 35.0% | |
| ! | TGTTTGGAACAATAGAGTTG+AGG | - | chr2_4:38618591-38618610 | Msa0327130:intron | 35.0% |
| TGAATGTTGTAACTCCCTAA+TGG | + | chr2_4:38618617-38618636 | None:intergenic | 35.0% | |
| TGTTGATACTCAACAGTGTA+TGG | - | chr2_4:38618651-38618670 | Msa0327130:intron | 35.0% | |
| ATCCACAATTGCATCACAAT+CGG | - | chr2_4:38618761-38618780 | Msa0327130:intron | 35.0% | |
| AAACTGTTTCAAGGGCAATT+TGG | - | chr2_4:38619075-38619094 | Msa0327130:CDS | 35.0% | |
| AACTGTTTCAAGGGCAATTT+GGG | - | chr2_4:38619076-38619095 | Msa0327130:CDS | 35.0% | |
| GCAAATGGATGAATTTGGAA+TGG | + | chr2_4:38619138-38619157 | None:intergenic | 35.0% | |
| ATTGAAAGAACATGACTGCA+TGG | + | chr2_4:38619238-38619257 | None:intergenic | 35.0% | |
| TAGGATTGACTACCTAGATT+TGG | - | chr2_4:38619720-38619739 | Msa0327130:intron | 35.0% | |
| AGGATTGACTACCTAGATTT+GGG | - | chr2_4:38619721-38619740 | Msa0327130:intron | 35.0% | |
| ! | CTATACTGATTGTCATAGCA+AGG | - | chr2_4:38619953-38619972 | Msa0327130:CDS | 35.0% |
| ATATCAACTTCCTTTGTCCA+TGG | - | chr2_4:38620267-38620286 | Msa0327130:intron | 35.0% | |
| CTATTGAACAATTGCGATTC+TGG | - | chr2_4:38620342-38620361 | Msa0327130:CDS | 35.0% | |
| ! | TATTCCATGCCTTCTCTTTT+TGG | - | chr2_4:38620411-38620430 | Msa0327130:CDS | 35.0% |
| AAGATCCAACCAAAAAGAGA+AGG | + | chr2_4:38620423-38620442 | None:intergenic | 35.0% | |
| ATGAATCTACTTGCATCTCT+AGG | - | chr2_4:38620480-38620499 | Msa0327130:CDS | 35.0% | |
| TGAATCTACTTGCATCTCTA+GGG | - | chr2_4:38620481-38620500 | Msa0327130:CDS | 35.0% | |
| GACTTCCAAATTTATTGCAG+AGG | - | chr2_4:38620525-38620544 | Msa0327130:CDS | 35.0% | |
| TTATTGCAGAGGTTTAGTCT+TGG | - | chr2_4:38620536-38620555 | Msa0327130:CDS | 35.0% | |
| !! | GTTTAGTCTTGGAGTTATGT+TGG | - | chr2_4:38620547-38620566 | Msa0327130:CDS | 35.0% |
| ATGCTTTCAGAGTTCTTGAA+AGG | - | chr2_4:38620692-38620711 | Msa0327130:CDS | 35.0% | |
| TGCTTTCAGAGTTCTTGAAA+GGG | - | chr2_4:38620693-38620712 | Msa0327130:CDS | 35.0% | |
| !! | TGTAGGTGGATTAGAAATGG+TGG | + | chr2_4:38616994-38617013 | None:intergenic | 40.0% |
| GCTAATCTCTTCCAATCCTT+CGG | - | chr2_4:38617041-38617060 | Msa0327130:intron | 40.0% | |
| AATTCGGAAGAGAAGAGGAA+GGG | + | chr2_4:38617070-38617089 | None:intergenic | 40.0% | |
| AAATTCGGAAGAGAAGAGGA+AGG | + | chr2_4:38617071-38617090 | None:intergenic | 40.0% | |
| TCAAGATTGCCTTTCTGTGT+TGG | - | chr2_4:38617199-38617218 | Msa0327130:intron | 40.0% | |
| ! | AACAAGTTGGCGATCATCAA+CGG | + | chr2_4:38617293-38617312 | None:intergenic | 40.0% |
| TGTAGAACAACGCAACAAGT+TGG | + | chr2_4:38617306-38617325 | None:intergenic | 40.0% | |
| ATTTCCCATTGCAGTTGTCA+TGG | - | chr2_4:38617421-38617440 | Msa0327130:intron | 40.0% | |
| TTTCCCATTGCAGTTGTCAT+GGG | - | chr2_4:38617422-38617441 | Msa0327130:intron | 40.0% | |
| ATGGGGGAAACTCAAATTGT+TGG | - | chr2_4:38617440-38617459 | Msa0327130:intron | 40.0% | |
| ! | TATGGAATTTGGGGTTCCTA+AGG | - | chr2_4:38617478-38617497 | Msa0327130:intron | 40.0% |
| GGGTTGTTAGATTGTTTCCT+AGG | - | chr2_4:38617513-38617532 | Msa0327130:CDS | 40.0% | |
| AATTCCAAATCCCAAACCCT+AGG | + | chr2_4:38617533-38617552 | None:intergenic | 40.0% | |
| ! | TGGGATTTGGAATTGAGGAT+AGG | - | chr2_4:38617539-38617558 | Msa0327130:intron | 40.0% |
| !! | AGCTGTTGATTCATGAGTTG+AGG | - | chr2_4:38617566-38617585 | Msa0327130:intron | 40.0% |
| ! | GATTCATGAGTTGAGGAGTT+TGG | - | chr2_4:38617573-38617592 | Msa0327130:intron | 40.0% |
| ! | TTCATGAGTTGAGGAGTTTG+GGG | - | chr2_4:38617575-38617594 | Msa0327130:intron | 40.0% |
| ! | TGGAGATTGGGGAATTTTCA+CGG | - | chr2_4:38617653-38617672 | Msa0327130:CDS | 40.0% |
| ! | GTTGCAGAGTTTGAAATGCA+CGG | - | chr2_4:38617687-38617706 | Msa0327130:CDS | 40.0% |
| !! | TTTTTGGAGAGGGTTTGGTT+AGG | - | chr2_4:38617728-38617747 | Msa0327130:CDS | 40.0% |
| !! | TTTTGGAGAGGGTTTGGTTA+GGG | - | chr2_4:38617729-38617748 | Msa0327130:CDS | 40.0% |
| !! | TTGAGAGTGGATTGTTTGTG+TGG | - | chr2_4:38617769-38617788 | Msa0327130:intron | 40.0% |
| ! | GAACCAAGGTTGATTGCTTA+CGG | - | chr2_4:38617835-38617854 | Msa0327130:intron | 40.0% |
| AAACCGTAAGCAATCAACCT+TGG | + | chr2_4:38617841-38617860 | None:intergenic | 40.0% | |
| ! | AAGGTTGATTGCTTACGGTT+TGG | - | chr2_4:38617840-38617859 | Msa0327130:intron | 40.0% |
| ! | TGGGTTTGAAGTTGGATTGA+AGG | - | chr2_4:38618001-38618020 | Msa0327130:intron | 40.0% |
| AGGACATCATCAAACCAACT+AGG | - | chr2_4:38618021-38618040 | Msa0327130:intron | 40.0% | |
| !!! | ATATGGGAGATTTTCGGGTA+AGG | - | chr2_4:38618094-38618113 | Msa0327130:intron | 40.0% |
| GTTAAAAGTAAGCATCCAGC+TGG | - | chr2_4:38618122-38618141 | Msa0327130:intron | 40.0% | |
| TTTGAGGAAACTTCTGTGGT+TGG | + | chr2_4:38618163-38618182 | None:intergenic | 40.0% | |
| CATGTTCTTCACATCTTGAC+CGG | + | chr2_4:38618186-38618205 | None:intergenic | 40.0% | |
| GAAGAACATGAAGGCTTTCA+TGG | - | chr2_4:38618196-38618215 | Msa0327130:intron | 40.0% | |
| TCATGGATTCAATGCTGTAG+TGG | - | chr2_4:38618213-38618232 | Msa0327130:intron | 40.0% | |
| CGTGTTCAAGCTCAAAATCA+TGG | + | chr2_4:38618274-38618293 | None:intergenic | 40.0% | |
| TGCAGTACTTTGAGTAATGC+AGG | + | chr2_4:38618381-38618400 | None:intergenic | 40.0% | |
| ACAATAGAGTTGAGGCCATT+AGG | - | chr2_4:38618599-38618618 | Msa0327130:intron | 40.0% | |
| CAATAGAGTTGAGGCCATTA+GGG | - | chr2_4:38618600-38618619 | Msa0327130:intron | 40.0% | |
| ! | TACCGATTGTGATGCAATTG+TGG | + | chr2_4:38618766-38618785 | None:intergenic | 40.0% |
| TTGCATCACAATCGGTATTC+TGG | - | chr2_4:38618769-38618788 | Msa0327130:intron | 40.0% | |
| CGCTATTATCCTCATTGTAG+CGG | + | chr2_4:38618940-38618959 | None:intergenic | 40.0% | |
| CGCTACAATGAGGATAATAG+CGG | - | chr2_4:38618938-38618957 | Msa0327130:intron | 40.0% | |
| TTAGGGCTCACAAACTTGAA+CGG | + | chr2_4:38619162-38619181 | None:intergenic | 40.0% | |
| ! | GAGGAAGAAGAAAAGCATGA+TGG | + | chr2_4:38619366-38619385 | None:intergenic | 40.0% |
| AGGTAGTCAATCCTAGATAG+CGG | + | chr2_4:38619715-38619734 | None:intergenic | 40.0% | |
| AACCCCAAAAGCTATCTCAA+GGG | - | chr2_4:38619757-38619776 | Msa0327130:intron | 40.0% | |
| TAACTTTAGCCAGTTGTCCA+TGG | + | chr2_4:38620287-38620306 | None:intergenic | 40.0% | |
| ATGGACAACTGGCTAAAGTT+AGG | - | chr2_4:38620286-38620305 | Msa0327130:CDS | 40.0% | |
| TGGACAACTGGCTAAAGTTA+GGG | - | chr2_4:38620287-38620306 | Msa0327130:CDS | 40.0% | |
| TTGAACAATTGCGATTCTGG+AGG | - | chr2_4:38620345-38620364 | Msa0327130:CDS | 40.0% | |
| TGAACAATTGCGATTCTGGA+GGG | - | chr2_4:38620346-38620365 | Msa0327130:CDS | 40.0% | |
| ! | AGAGAAGGCATGGAATATCT+CGG | + | chr2_4:38620408-38620427 | None:intergenic | 40.0% |
| ! | CGATGGTTGACTTAAGAAAG+TGG | - | chr2_4:38620572-38620591 | Msa0327130:CDS | 40.0% |
| !! | AAGTGGATTGCAACAAGAAG+TGG | - | chr2_4:38620589-38620608 | Msa0327130:CDS | 40.0% |
| TCTTGAAAGGGTGACATTAC+AGG | - | chr2_4:38620705-38620724 | Msa0327130:CDS | 40.0% | |
| ! | CCAGAATTTGTTCCAAAGCT+CGG | - | chr2_4:38620754-38620773 | Msa0327130:CDS | 40.0% |
| ! | TATTGGCATTTGGGCTTTTC+AGG | - | chr2_4:38620794-38620813 | Msa0327130:CDS | 40.0% |
| ! | ATTGGCATTTGGGCTTTTCA+GGG | - | chr2_4:38620795-38620814 | Msa0327130:CDS | 40.0% |
| GAGGAAATTCGGAAGAGAAG+AGG | + | chr2_4:38617075-38617094 | None:intergenic | 45.0% | |
| !! | AGAGGAAGTGGTTTTTGGAG+AGG | + | chr2_4:38617094-38617113 | None:intergenic | 45.0% |
| ! | GATCGGTATTGAAGAGGAAG+TGG | + | chr2_4:38617106-38617125 | None:intergenic | 45.0% |
| GGTAAGAGATTGACGAAGGT+GGG | + | chr2_4:38617132-38617151 | None:intergenic | 45.0% | |
| TGGTAAGAGATTGACGAAGG+TGG | + | chr2_4:38617133-38617152 | None:intergenic | 45.0% | |
| ATTGGGGTTCCAACACAGAA+AGG | + | chr2_4:38617211-38617230 | None:intergenic | 45.0% | |
| ! | ACAAGTTGGCGATCATCAAC+GGG | + | chr2_4:38617292-38617311 | None:intergenic | 45.0% |
| TTCCCATTGCAGTTGTCATG+GGG | - | chr2_4:38617423-38617442 | Msa0327130:intron | 45.0% | |
| ! | GTTTCCTAGGGTTTGGGATT+TGG | - | chr2_4:38617526-38617545 | Msa0327130:CDS | 45.0% |
| ! | GGGTTTGGGATTTGGAATTG+AGG | - | chr2_4:38617534-38617553 | Msa0327130:intron | 45.0% |
| ! | TGTTAGGGATCCAAGGGTTT+TGG | - | chr2_4:38617627-38617646 | Msa0327130:intron | 45.0% |
| ! | GTTAGGGATCCAAGGGTTTT+GGG | - | chr2_4:38617628-38617647 | Msa0327130:intron | 45.0% |
| ATCTCCATTCCCAAAACCCT+TGG | + | chr2_4:38617640-38617659 | None:intergenic | 45.0% | |
| !!! | AGGGTTTTGGGAATGGAGAT+TGG | - | chr2_4:38617640-38617659 | Msa0327130:intron | 45.0% |
| !!! | GGGTTTTGGGAATGGAGATT+GGG | - | chr2_4:38617641-38617660 | Msa0327130:intron | 45.0% |
| !!! | GGTTTTGGGAATGGAGATTG+GGG | - | chr2_4:38617642-38617661 | Msa0327130:intron | 45.0% |
| !! | GAGGATTTTTGGAGAGGGTT+TGG | - | chr2_4:38617723-38617742 | Msa0327130:CDS | 45.0% |
| ! | GTGGATTGTTTGTGTGGTCA+CGG | - | chr2_4:38617775-38617794 | Msa0327130:intron | 45.0% |
| ! | ACACCTTCAAAGCATCCCTA+CGG | + | chr2_4:38617807-38617826 | None:intergenic | 45.0% |
| !! | TGCTTTGAAGGTGTTGTGGA+AGG | - | chr2_4:38617813-38617832 | Msa0327130:intron | 45.0% |
| ! | GTTGATTGCTTACGGTTTGG+AGG | - | chr2_4:38617843-38617862 | Msa0327130:intron | 45.0% |
| ! | GGTGCAATTGGGTTTGAAGT+TGG | - | chr2_4:38617993-38618012 | Msa0327130:intron | 45.0% |
| CCACAGAAGTTTCCTCAAAC+CGG | - | chr2_4:38618164-38618183 | Msa0327130:intron | 45.0% | |
| !! | TTCACATCTTGACCGGTTTG+AGG | + | chr2_4:38618179-38618198 | None:intergenic | 45.0% |
| AGTACTGCAGAAAAAGGGGA+AGG | - | chr2_4:38618392-38618411 | Msa0327130:intron | 45.0% | |
| ATTCCATGAGCTACTGCTTG+TGG | + | chr2_4:38618572-38618591 | None:intergenic | 45.0% | |
| GCAGTAGCTCATGGAATGTT+TGG | - | chr2_4:38618575-38618594 | Msa0327130:intron | 45.0% | |
| GTGATGCAATTGTGGATGCA+AGG | + | chr2_4:38618758-38618777 | None:intergenic | 45.0% | |
| ACGGCGCAAATGGATGAATT+TGG | + | chr2_4:38619143-38619162 | None:intergenic | 45.0% | |
| ACAAACTTGAACGGCGCAAA+TGG | + | chr2_4:38619153-38619172 | None:intergenic | 45.0% | |
| CAGAGCGATGAAAACGGTTA+GGG | + | chr2_4:38619179-38619198 | None:intergenic | 45.0% | |
| ACAGAGCGATGAAAACGGTT+AGG | + | chr2_4:38619180-38619199 | None:intergenic | 45.0% | |
| ACGGAACAGAGCGATGAAAA+CGG | + | chr2_4:38619185-38619204 | None:intergenic | 45.0% | |
| CGATGGGTGCAAAACTTGAA+CGG | + | chr2_4:38619204-38619223 | None:intergenic | 45.0% | |
| GAAAGAACATGACTGCATGG+TGG | + | chr2_4:38619235-38619254 | None:intergenic | 45.0% | |
| ! | ATAGCGGGGATAGCTTATAG+CGG | + | chr2_4:38619699-38619718 | None:intergenic | 45.0% |
| ATAAGCTATCCCCGCTATCT+AGG | - | chr2_4:38619701-38619720 | Msa0327130:intron | 45.0% | |
| GTAGTCAATCCTAGATAGCG+GGG | + | chr2_4:38619713-38619732 | None:intergenic | 45.0% | |
| GGTAGTCAATCCTAGATAGC+GGG | + | chr2_4:38619714-38619733 | None:intergenic | 45.0% | |
| TGACTACCTAGATTTGGGCT+AGG | - | chr2_4:38619726-38619745 | Msa0327130:intron | 45.0% | |
| CTCAAACCTAGCCCAAATCT+AGG | + | chr2_4:38619735-38619754 | None:intergenic | 45.0% | |
| CAACCCCAAAAGCTATCTCA+AGG | - | chr2_4:38619756-38619775 | Msa0327130:intron | 45.0% | |
| ACCCCAAAAGCTATCTCAAG+GGG | - | chr2_4:38619758-38619777 | Msa0327130:intron | 45.0% | |
| ! | GTTGGAGCGGAAAACTTGTT+TGG | - | chr2_4:38620201-38620220 | Msa0327130:intron | 45.0% |
| TTCCTTTGTCCATGGACAAC+TGG | - | chr2_4:38620275-38620294 | Msa0327130:intron | 45.0% | |
| CAACTGGCTAAAGTTAGGGA+AGG | - | chr2_4:38620291-38620310 | Msa0327130:CDS | 45.0% | |
| TGGAGGGTTTGCATTCGATA+TGG | - | chr2_4:38620362-38620381 | Msa0327130:CDS | 45.0% | |
| CCAACCAAAAAGAGAAGGCA+TGG | + | chr2_4:38620418-38620437 | None:intergenic | 45.0% | |
| !! | CCATGCCTTCTCTTTTTGGT+TGG | - | chr2_4:38620415-38620434 | Msa0327130:CDS | 45.0% |
| ! | ATCTACTTGCATCTCTAGGG+AGG | - | chr2_4:38620484-38620503 | Msa0327130:CDS | 45.0% |
| ! | TAGGGAGGCATATCTTGTTC+TGG | - | chr2_4:38620499-38620518 | Msa0327130:CDS | 45.0% |
| TTGGAGTTATGTTGGTGCGA+TGG | - | chr2_4:38620555-38620574 | Msa0327130:CDS | 45.0% | |
| GTGACATTACAGGAAGCCAA+TGG | - | chr2_4:38620715-38620734 | Msa0327130:CDS | 45.0% | |
| !! | GGAACAAATTCTGGAATCCG+TGG | + | chr2_4:38620748-38620767 | None:intergenic | 45.0% |
| !! | CCGAGCTTTGGAACAAATTC+TGG | + | chr2_4:38620757-38620776 | None:intergenic | 45.0% |
| ATCAACTCAAGTCCGAGCTT+TGG | + | chr2_4:38620769-38620788 | None:intergenic | 45.0% | |
| !! | ATGTTTATAAATAATAATAT+AGG | - | chr2_4:38618798-38618817 | Msa0327130:intron | 5.0% |
| AGGAAGGGAAACCGAAGGAT+TGG | + | chr2_4:38617055-38617074 | None:intergenic | 50.0% | |
| AGAAGAGGAAGGGAAACCGA+AGG | + | chr2_4:38617060-38617079 | None:intergenic | 50.0% | |
| ! | GGGATGGATCGGTATTGAAG+AGG | + | chr2_4:38617112-38617131 | None:intergenic | 50.0% |
| TTGACGAAGGTGGGATGGAT+CGG | + | chr2_4:38617123-38617142 | None:intergenic | 50.0% | |
| AGAGATTGACGAAGGTGGGA+TGG | + | chr2_4:38617128-38617147 | None:intergenic | 50.0% | |
| GGGTGGTAAGAGATTGACGA+AGG | + | chr2_4:38617136-38617155 | None:intergenic | 50.0% | |
| !! | CGGGGAAGCATTAGAAAGCT+TGG | + | chr2_4:38617273-38617292 | None:intergenic | 50.0% |
| ! | CAAGTTGGCGATCATCAACG+GGG | + | chr2_4:38617291-38617310 | None:intergenic | 50.0% |
| TCCCATTGCAGTTGTCATGG+GGG | - | chr2_4:38617424-38617443 | Msa0327130:intron | 50.0% | |
| TCCCCCATGACAACTGCAAT+GGG | + | chr2_4:38617428-38617447 | None:intergenic | 50.0% | |
| TTCCCCCATGACAACTGCAA+TGG | + | chr2_4:38617429-38617448 | None:intergenic | 50.0% | |
| GGAGGTTGTTAGGGATCCAA+GGG | - | chr2_4:38617621-38617640 | Msa0327130:intron | 50.0% | |
| !!! | GGATCCAAGGGTTTTGGGAA+TGG | - | chr2_4:38617633-38617652 | Msa0327130:intron | 50.0% |
| ! | GCAGAGTTTGAAATGCACGG+AGG | - | chr2_4:38617690-38617709 | Msa0327130:CDS | 50.0% |
| GCACGGAGGCAATTAAAGAG+AGG | - | chr2_4:38617704-38617723 | Msa0327130:CDS | 50.0% | |
| TGGTCACGGTTTGATCCGTA+GGG | - | chr2_4:38617789-38617808 | Msa0327130:intron | 50.0% | |
| GATCCGTAGGGATGCTTTGA+AGG | - | chr2_4:38617801-38617820 | Msa0327130:intron | 50.0% | |
| !! | GGGATGCTTTGAAGGTGTTG+TGG | - | chr2_4:38617809-38617828 | Msa0327130:intron | 50.0% |
| ! | AGGTGTTGTGGAAGGAACCA+AGG | - | chr2_4:38617821-38617840 | Msa0327130:intron | 50.0% |
| GTAAGCATCCAGCTGGACTT+TGG | - | chr2_4:38618129-38618148 | Msa0327130:intron | 50.0% | |
| AACAGCTTCCAAAGTCCAGC+TGG | + | chr2_4:38618140-38618159 | None:intergenic | 50.0% | |
| ! | CCGGTTTGAGGAAACTTCTG+TGG | + | chr2_4:38618167-38618186 | None:intergenic | 50.0% |
| ! | TCTCGCGCTATTGACTACGT+AGG | + | chr2_4:38618880-38618899 | None:intergenic | 50.0% |
| AGCGGAGCAGTTAACGATAG+TGG | - | chr2_4:38618956-38618975 | Msa0327130:intron | 50.0% | |
| ATGACTGCATGGTGGCTGTA+CGG | + | chr2_4:38619227-38619246 | None:intergenic | 50.0% | |
| TAGCGGGGATAGCTTATAGC+GGG | + | chr2_4:38619698-38619717 | None:intergenic | 50.0% | |
| ! | CCCCCTTGAGATAGCTTTTG+GGG | + | chr2_4:38619762-38619781 | None:intergenic | 50.0% |
| CCCCAAAAGCTATCTCAAGG+GGG | - | chr2_4:38619759-38619778 | Msa0327130:intron | 50.0% | |
| ! | CCCCCCTTGAGATAGCTTTT+GGG | + | chr2_4:38619763-38619782 | None:intergenic | 50.0% |
| CCCAAAAGCTATCTCAAGGG+GGG | - | chr2_4:38619760-38619779 | Msa0327130:intron | 50.0% | |
| ! | TCCCCCCTTGAGATAGCTTT+TGG | + | chr2_4:38619764-38619783 | None:intergenic | 50.0% |
| AAAAGCTATCTCAAGGGGGG+AGG | - | chr2_4:38619763-38619782 | Msa0327130:intron | 50.0% | |
| GACTCTTCCAAAGCTGCTGT+GGG | + | chr2_4:38619925-38619944 | None:intergenic | 50.0% | |
| AGACTCTTCCAAAGCTGCTG+TGG | + | chr2_4:38619926-38619945 | None:intergenic | 50.0% | |
| GGTTAAGGTCTTGGCTCAGT+TGG | - | chr2_4:38620183-38620202 | Msa0327130:CDS | 50.0% | |
| AGCCAGTTGTCCATGGACAA+AGG | + | chr2_4:38620280-38620299 | None:intergenic | 50.0% | |
| !! | AATTCTGGAATCCGTGGCAC+AGG | + | chr2_4:38620742-38620761 | None:intergenic | 50.0% |
| !! | TTTGGGGTTTTCCAGCCGAG+AGG | - | chr2_4:38617591-38617610 | Msa0327130:intron | 55.0% |
| ! | GTTTTCCAGCCGAGAGGTCA+GGG | - | chr2_4:38617597-38617616 | Msa0327130:intron | 55.0% |
| CGGAGGTTGTTAGGGATCCA+AGG | - | chr2_4:38617620-38617639 | Msa0327130:intron | 55.0% | |
| GTGGTCACGGTTTGATCCGT+AGG | - | chr2_4:38617788-38617807 | Msa0327130:intron | 55.0% | |
| CCATGAGCTACTGCTTGTGG+TGG | + | chr2_4:38618569-38618588 | None:intergenic | 55.0% | |
| CCACCACAAGCAGTAGCTCA+TGG | - | chr2_4:38618566-38618585 | Msa0327130:intron | 55.0% | |
| TAGCGGCAGAGTGGAGTAGA+GGG | - | chr2_4:38618911-38618930 | Msa0327130:intron | 55.0% | |
| ! | TTAACGATAGTGGCCGCTCC+AGG | - | chr2_4:38618966-38618985 | Msa0327130:intron | 55.0% |
| GATGGATCCCACAGCAGCTT+TGG | - | chr2_4:38619915-38619934 | Msa0327130:CDS | 55.0% | |
| AGGTCTTGGCTCAGTTGGAG+CGG | - | chr2_4:38620188-38620207 | Msa0327130:intron | 55.0% | |
| AAGCCAATGGACCTGTGCCA+CGG | - | chr2_4:38620728-38620747 | Msa0327130:CDS | 55.0% | |
| AATCCGTGGCACAGGTCCAT+TGG | + | chr2_4:38620734-38620753 | None:intergenic | 55.0% | |
| ! | GGTTTTCCAGCCGAGAGGTC+AGG | - | chr2_4:38617596-38617615 | Msa0327130:intron | 60.0% |
| AGGTCAGGGCGGAGGTTGTT+AGG | - | chr2_4:38617611-38617630 | Msa0327130:intron | 60.0% | |
| GGTCAGGGCGGAGGTTGTTA+GGG | - | chr2_4:38617612-38617631 | Msa0327130:intron | 60.0% | |
| ACTCCACTCTGCCGCTACAG+CGG | + | chr2_4:38618908-38618927 | None:intergenic | 60.0% | |
| GTAGCGGCAGAGTGGAGTAG+AGG | - | chr2_4:38618910-38618929 | Msa0327130:intron | 60.0% | |
| AGAGGGTCGCCGCTACAATG+AGG | - | chr2_4:38618928-38618947 | Msa0327130:intron | 60.0% | |
| CGCCAAGATCTCACCTGGAG+CGG | + | chr2_4:38618982-38619001 | None:intergenic | 60.0% | |
| CGCTCCAGGTGAGATCTTGG+CGG | - | chr2_4:38618980-38618999 | Msa0327130:intron | 60.0% | |
| CAGGTGAGATCTTGGCGGAG+CGG | - | chr2_4:38618985-38619004 | Msa0327130:intron | 60.0% | |
| AGGTGAGATCTTGGCGGAGC+GGG | - | chr2_4:38618986-38619005 | Msa0327130:intron | 60.0% | |
| CATGGTGGCTGTACGGCGAT+GGG | + | chr2_4:38619220-38619239 | None:intergenic | 60.0% | |
| TTCCAGCCGAGAGGTCAGGG+CGG | - | chr2_4:38617600-38617619 | Msa0327130:intron | 65.0% | |
| CAACCTCCGCCCTGACCTCT+CGG | + | chr2_4:38617609-38617628 | None:intergenic | 65.0% | |
| GCGAGATAGCGCCGCTGTAG+CGG | - | chr2_4:38618894-38618913 | Msa0327130:intron | 65.0% | |
| GGCCGCTCCAGGTGAGATCT+TGG | - | chr2_4:38618977-38618996 | Msa0327130:intron | 65.0% | |
| CGCTCCGCCAAGATCTCACC+TGG | + | chr2_4:38618987-38619006 | None:intergenic | 65.0% | |
| GGTGAGATCTTGGCGGAGCG+GGG | - | chr2_4:38618987-38619006 | Msa0327130:intron | 65.0% | |
| GCATGGTGGCTGTACGGCGA+TGG | + | chr2_4:38619221-38619240 | None:intergenic | 65.0% | |
| CTCCGCCCTGACCTCTCGGC+TGG | + | chr2_4:38617605-38617624 | None:intergenic | 75.0% | |
| CAGCCGAGAGGTCAGGGCGG+AGG | - | chr2_4:38617603-38617622 | Msa0327130:intron | 75.0% | |
| GCGCCGCTGTAGCGGCAGAG+TGG | - | chr2_4:38618902-38618921 | Msa0327130:intron | 75.0% | |
| ! | GCGGAGCGGGGTCGCAGAGC+AGG | - | chr2_4:38618999-38619018 | Msa0327130:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 38616903 | 38620834 | 38616903 | ID=Msa0327130;Name=Msa0327130 |
| chr2_4 | mRNA | 38616903 | 38620834 | 38616903 | ID=Msa0327130-mRNA-1;Parent=Msa0327130;Name=Msa0327130-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0.16|0|1|1|1|7|0|558 |
| chr2_4 | exon | 38620280 | 38620834 | 38620280 | ID=Msa0327130-mRNA-1:exon:11607;Parent=Msa0327130-mRNA-1 |
| chr2_4 | exon | 38619769 | 38620202 | 38619769 | ID=Msa0327130-mRNA-1:exon:11606;Parent=Msa0327130-mRNA-1 |
| chr2_4 | exon | 38619509 | 38619694 | 38619509 | ID=Msa0327130-mRNA-1:exon:11605;Parent=Msa0327130-mRNA-1 |
| chr2_4 | exon | 38619065 | 38619266 | 38619065 | ID=Msa0327130-mRNA-1:exon:11604;Parent=Msa0327130-mRNA-1 |
| chr2_4 | exon | 38617650 | 38617766 | 38617650 | ID=Msa0327130-mRNA-1:exon:11603;Parent=Msa0327130-mRNA-1 |
| chr2_4 | exon | 38617498 | 38617547 | 38617498 | ID=Msa0327130-mRNA-1:exon:11602;Parent=Msa0327130-mRNA-1 |
| chr2_4 | exon | 38616903 | 38617035 | 38616903 | ID=Msa0327130-mRNA-1:exon:11601;Parent=Msa0327130-mRNA-1 |
| chr2_4 | CDS | 38620280 | 38620834 | 38620280 | ID=Msa0327130-mRNA-1:cds;Parent=Msa0327130-mRNA-1 |
| chr2_4 | CDS | 38619769 | 38620202 | 38619769 | ID=Msa0327130-mRNA-1:cds;Parent=Msa0327130-mRNA-1 |
| chr2_4 | CDS | 38619509 | 38619694 | 38619509 | ID=Msa0327130-mRNA-1:cds;Parent=Msa0327130-mRNA-1 |
| chr2_4 | CDS | 38619065 | 38619266 | 38619065 | ID=Msa0327130-mRNA-1:cds;Parent=Msa0327130-mRNA-1 |
| chr2_4 | CDS | 38617650 | 38617766 | 38617650 | ID=Msa0327130-mRNA-1:cds;Parent=Msa0327130-mRNA-1 |
| chr2_4 | CDS | 38617498 | 38617547 | 38617498 | ID=Msa0327130-mRNA-1:cds;Parent=Msa0327130-mRNA-1 |
| chr2_4 | CDS | 38616903 | 38617035 | 38616903 | ID=Msa0327130-mRNA-1:cds;Parent=Msa0327130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
