Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289390 | XP_003595777.1 | 99.540 | 435 | 2 | 0 | 1 | 435 | 1 | 435 | 0.0 | 882 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289390 | sp|Q08A72|EML4_ARATH | 56.010 | 391 | 158 | 8 | 41 | 424 | 45 | 428 | 6.91e-145 | 422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0210260 | Msa0289390 | 0.858009 | 1.105475e-62 | -8.615850e-47 |
| Msa0289390 | Msa0628400 | 0.802053 | 6.734132e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289390 | MtrunA17_Chr2g0308511 | 99.540 | 435 | 2 | 0 | 1 | 435 | 1 | 435 | 0.0 | 882 |
| Msa0289390 | MtrunA17_Chr1g0175141 | 52.821 | 390 | 125 | 8 | 51 | 434 | 1 | 337 | 8.92e-127 | 371 |
| Msa0289390 | MtrunA17_Chr4g0010421 | 86.628 | 172 | 23 | 0 | 1 | 172 | 1 | 172 | 2.76e-108 | 317 |
| Msa0289390 | MtrunA17_Chr4g0010411 | 74.146 | 205 | 48 | 4 | 235 | 435 | 2 | 205 | 9.89e-87 | 263 |
| Msa0289390 | MtrunA17_Chr4g0056121 | 80.435 | 46 | 9 | 0 | 60 | 105 | 20 | 65 | 6.85e-17 | 77.4 |
| Msa0289390 | MtrunA17_Chr4g0056121 | 54.795 | 73 | 30 | 2 | 201 | 271 | 66 | 137 | 1.37e-14 | 70.9 |
| Msa0289390 | MtrunA17_Chr7g0254081 | 46.341 | 82 | 36 | 1 | 58 | 139 | 1 | 74 | 2.04e-16 | 80.9 |
| Msa0289390 | MtrunA17_Chr4g0056131 | 46.377 | 69 | 24 | 1 | 350 | 418 | 1 | 56 | 2.33e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289390 | AT2G44440.1 | 56.010 | 391 | 158 | 8 | 41 | 424 | 45 | 428 | 7.02e-146 | 422 |
| Msa0289390 | AT5G13020.1 | 56.265 | 423 | 152 | 10 | 1 | 419 | 1 | 394 | 2.97e-145 | 420 |
| Msa0289390 | AT5G13020.3 | 57.718 | 298 | 100 | 7 | 1 | 297 | 1 | 273 | 8.96e-102 | 305 |
| Msa0289390 | AT5G13020.2 | 57.534 | 292 | 98 | 7 | 1 | 291 | 1 | 267 | 5.61e-98 | 296 |
| Msa0289390 | AT3G12140.2 | 48.276 | 377 | 126 | 9 | 51 | 421 | 1 | 314 | 8.62e-93 | 283 |
| Msa0289390 | AT3G12140.1 | 48.276 | 377 | 126 | 9 | 51 | 421 | 1 | 314 | 8.62e-93 | 283 |
| Msa0289390 | AT3G12140.3 | 48.128 | 374 | 125 | 9 | 51 | 418 | 1 | 311 | 5.08e-91 | 281 |
| Msa0289390 | AT5G06780.1 | 43.700 | 373 | 139 | 7 | 49 | 421 | 6 | 307 | 3.07e-88 | 271 |
| Msa0289390 | AT5G06780.2 | 43.666 | 371 | 138 | 7 | 51 | 421 | 1 | 300 | 1.93e-87 | 269 |
Find 168 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAACACCTACGTTGTAAAA+TGG | 0.171586 | 2_3:+35586614 | Msa0289390:three_prime_UTR |
| GGCATCAGCTTGAGCTTTAA+AGG | 0.189479 | 2_3:-35582831 | None:intergenic |
| TGCTTCTTGCCCTTAGTTCC+TGG | 0.200809 | 2_3:-35583398 | None:intergenic |
| AGGATGACAATTATGTAATT+TGG | 0.222474 | 2_3:+35586705 | Msa0289390:three_prime_UTR |
| ACCCATGATGATTAAGATTT+GGG | 0.247179 | 2_3:-35586884 | None:intergenic |
| GTGGGGTGCAGCCACGGGCT+GGG | 0.250938 | 2_3:-35583339 | None:intergenic |
| CACCAAGTCTTGTGAATAAA+TGG | 0.261589 | 2_3:-35586841 | None:intergenic |
| GGTGGGGTGCAGCCACGGGC+TGG | 0.267425 | 2_3:-35583340 | None:intergenic |
| CAGCCCAGTGTGCTGAGTTC+TGG | 0.291340 | 2_3:+35583200 | Msa0289390:CDS |
| CCTAGAGGGGCACGTCTTGC+TGG | 0.293075 | 2_3:+35582695 | Msa0289390:CDS |
| TACCCATGATGATTAAGATT+TGG | 0.296054 | 2_3:-35586885 | None:intergenic |
| ATGAACGAATCGAAGATCTT+AGG | 0.308453 | 2_3:-35581129 | None:intergenic |
| CCTGGAATCAACCATCGTTT+TGG | 0.329010 | 2_3:+35585419 | Msa0289390:CDS |
| AATAAAGCAATACCCTTCTT+CGG | 0.340861 | 2_3:+35583615 | Msa0289390:CDS |
| TGGGGTGCAGCCACGGGCTG+GGG | 0.347249 | 2_3:-35583338 | None:intergenic |
| CTCAAGCTGATGCCATTACT+TGG | 0.350686 | 2_3:+35582840 | Msa0289390:CDS |
| GTAGGTCGTGATAGTGTTCC+AGG | 0.351196 | 2_3:+35585470 | Msa0289390:CDS |
| GGACTCGGAAACTGAGTTAT+TGG | 0.357216 | 2_3:-35581069 | None:intergenic |
| GATCTTTCTGATGGCGATAA+TGG | 0.357677 | 2_3:+35585934 | Msa0289390:CDS |
| CACAAGACTTGGTGACTGTT+TGG | 0.364338 | 2_3:+35586850 | Msa0289390:three_prime_UTR |
| TGGCTGGTGGGGTGCAGCCA+CGG | 0.365263 | 2_3:-35583345 | None:intergenic |
| GAGGAACATAGGGAACTTCT+AGG | 0.365417 | 2_3:+35583003 | Msa0289390:CDS |
| GTCAATTTCACCGTACATCC+TGG | 0.372915 | 2_3:-35582753 | None:intergenic |
| GGGGCACGTCTTGCTGGGAA+TGG | 0.373208 | 2_3:+35582701 | Msa0289390:CDS |
| GTACCCGAAGTAACTCTATT+AGG | 0.380380 | 2_3:-35583661 | None:intergenic |
| TTGCCCTTAGTTCCTGGAAC+AGG | 0.381177 | 2_3:-35583392 | None:intergenic |
| TTCTCAATTTCATGTACATC+AGG | 0.383976 | 2_3:-35585738 | None:intergenic |
| GGCTGGTGGGGTGCAGCCAC+GGG | 0.385323 | 2_3:-35583344 | None:intergenic |
| CCAAAACGATGGTTGATTCC+AGG | 0.388750 | 2_3:-35585419 | None:intergenic |
| TGCTTTATTGAAGGTGCTCC+TGG | 0.391044 | 2_3:-35583601 | None:intergenic |
| TTGATTTAACATGTGAGAAA+TGG | 0.395327 | 2_3:-35586576 | None:intergenic |
| ATAAAGCAATACCCTTCTTC+GGG | 0.395622 | 2_3:+35583616 | Msa0289390:CDS |
| GAACACCTACGTTGTAAAAT+GGG | 0.410249 | 2_3:+35586615 | Msa0289390:three_prime_UTR |
| TCGATTTGTCGTGTCGGACT+CGG | 0.413204 | 2_3:-35581084 | None:intergenic |
| TTTCTCACATGTTAAATCAA+TGG | 0.415277 | 2_3:+35586579 | Msa0289390:CDS |
| GGAAAACGTGGACCTGTTCC+AGG | 0.422832 | 2_3:+35583380 | Msa0289390:CDS |
| ACTTCGCTTCCCGTGAAATC+TGG | 0.422993 | 2_3:+35581243 | Msa0289390:five_prime_UTR |
| TGGTAATAATTATTTATTGA+GGG | 0.429672 | 2_3:+35586725 | Msa0289390:three_prime_UTR |
| GGGAAGTGTAAATGAATCAT+TGG | 0.431698 | 2_3:+35583920 | Msa0289390:CDS |
| ACCCCAAATCTTAATCATCA+TGG | 0.431728 | 2_3:+35586882 | Msa0289390:three_prime_UTR |
| TCTCTTGTATTCTATCAGAT+AGG | 0.434573 | 2_3:+35586685 | Msa0289390:three_prime_UTR |
| CCCCTACCTCTTCCAGCGCC+TGG | 0.437181 | 2_3:-35585488 | None:intergenic |
| GATCTGGTCGTGGGATGAAT+AGG | 0.438428 | 2_3:+35585444 | Msa0289390:CDS |
| TCATAGAAGTTATTGTCATC+AGG | 0.439972 | 2_3:-35583754 | None:intergenic |
| ATGGGAAAAGGAGGCATTCA+AGG | 0.441036 | 2_3:+35586633 | Msa0289390:three_prime_UTR |
| TAATTTAATACAGCAAATAT+AGG | 0.442764 | 2_3:-35586808 | None:intergenic |
| GGGCACGTCTTGCTGGGAAT+GGG | 0.448749 | 2_3:+35582702 | Msa0289390:CDS |
| AGAGGTAGGGGAGGTACAAA+GGG | 0.450148 | 2_3:+35585500 | Msa0289390:CDS |
| TTGCCATCACAGAATGGAAT+CGG | 0.451792 | 2_3:+35585542 | Msa0289390:CDS |
| TTCAATATTATTTCTAGGGA+GGG | 0.453417 | 2_3:-35581014 | None:intergenic |
| CGTGATAGTGTTCCAGGCGC+TGG | 0.455267 | 2_3:+35585476 | Msa0289390:CDS |
| GAATGAGGAAGGAGGAGTAG+AGG | 0.456632 | 2_3:-35581171 | None:intergenic |
| CACCAGCCATCTTCTTCTGT+TGG | 0.456682 | 2_3:+35583359 | Msa0289390:CDS |
| CAATACCCTTCTTCGGGACC+AGG | 0.459640 | 2_3:+35583622 | Msa0289390:CDS |
| CGGAAGATATTCAATGGGTA+GGG | 0.460464 | 2_3:+35585390 | Msa0289390:CDS |
| CACCATTTATTCACAAGACT+TGG | 0.462492 | 2_3:+35586839 | Msa0289390:three_prime_UTR |
| GATTATCAAATGAGGAACAT+AGG | 0.464821 | 2_3:+35582992 | Msa0289390:CDS |
| GAAGGGTATTGCTTTATTGA+AGG | 0.465077 | 2_3:-35583610 | None:intergenic |
| TGTAAATGAATCATTGGAAT+GGG | 0.466303 | 2_3:+35583926 | Msa0289390:CDS |
| ATTATCAAATGAGGAACATA+GGG | 0.470814 | 2_3:+35582993 | Msa0289390:CDS |
| GGGTAACTTGTCAGGTGGAA+AGG | 0.475104 | 2_3:+35585697 | Msa0289390:intron |
| TTGGTAATAATTATTTATTG+AGG | 0.477000 | 2_3:+35586724 | Msa0289390:three_prime_UTR |
| CACAGACACACTAGTTAAAG+AGG | 0.478328 | 2_3:+35585598 | Msa0289390:CDS |
| TCTCTCCGGAAGATATTCAA+TGG | 0.483434 | 2_3:+35585384 | Msa0289390:CDS |
| GAGTAGAGGAACAATGATTG+AGG | 0.486194 | 2_3:-35581157 | None:intergenic |
| TCCGTACCATCACAATCTTA+TGG | 0.486303 | 2_3:+35583293 | Msa0289390:CDS |
| TGGACCTGTTCCAGGAACTA+AGG | 0.487227 | 2_3:+35583388 | Msa0289390:CDS |
| GTGTAAATGAATCATTGGAA+TGG | 0.491091 | 2_3:+35583925 | Msa0289390:CDS |
| TTAAGGGAGTGGAGACAGAC+AGG | 0.491451 | 2_3:+35583170 | Msa0289390:intron |
| GAAAGCCAAGAAAATATTGA+AGG | 0.498578 | 2_3:+35585758 | Msa0289390:CDS |
| CCAGGCGCTGGAAGAGGTAG+GGG | 0.498970 | 2_3:+35585488 | Msa0289390:CDS |
| GTACCTAATAGAGTTACTTC+GGG | 0.499309 | 2_3:+35583658 | Msa0289390:CDS |
| CCTACCCATTGAATATCTTC+CGG | 0.502345 | 2_3:-35585389 | None:intergenic |
| AGTACCTAATAGAGTTACTT+CGG | 0.502873 | 2_3:+35583657 | Msa0289390:CDS |
| CTAGAGGGGCACGTCTTGCT+GGG | 0.503115 | 2_3:+35582696 | Msa0289390:CDS |
| GGTAACTTGTCAGGTGGAAA+GGG | 0.504129 | 2_3:+35585698 | Msa0289390:intron |
| GTGGATGTAAGTACATCTAC+TGG | 0.505198 | 2_3:-35583799 | None:intergenic |
| GAAGCAGAGACTGTTGGACT+TGG | 0.505403 | 2_3:-35583245 | None:intergenic |
| AATAGAGTTACTTCGGGTAC+TGG | 0.508423 | 2_3:+35583664 | Msa0289390:CDS |
| TTACGAGAAGCAGAGACTGT+TGG | 0.510483 | 2_3:-35583251 | None:intergenic |
| AGTGTTCCAGGCGCTGGAAG+AGG | 0.511098 | 2_3:+35585482 | Msa0289390:CDS |
| AACTCAGCACACTGGGCTGA+TGG | 0.513722 | 2_3:-35583196 | None:intergenic |
| TCAATTTCACCGTACATCCT+GGG | 0.514345 | 2_3:-35582752 | None:intergenic |
| CCAGCAAGACGTGCCCCTCT+AGG | 0.514854 | 2_3:-35582695 | None:intergenic |
| CTACGTTGTAAAATGGGAAA+AGG | 0.518139 | 2_3:+35586621 | Msa0289390:three_prime_UTR |
| TTTCCGATTCCATTCTGTGA+TGG | 0.519534 | 2_3:-35585545 | None:intergenic |
| CAATGGGTAGGGGAGGAACC+TGG | 0.520661 | 2_3:+35585401 | Msa0289390:CDS |
| AAGAAAATGTACCCAAGTAA+TGG | 0.521418 | 2_3:-35582852 | None:intergenic |
| CTTCCCGTGAAATCTGGCTA+TGG | 0.521624 | 2_3:+35581249 | Msa0289390:exon |
| AGCGAAAGTGAAAGAGAATG+AGG | 0.522621 | 2_3:-35581186 | None:intergenic |
| CGTACTTTCTTGCCAACGAG+TGG | 0.524221 | 2_3:-35583721 | None:intergenic |
| GATTTATTGCCATCACAGAA+TGG | 0.526792 | 2_3:+35585536 | Msa0289390:CDS |
| TGCTTCTCGTAAGAAGCAAA+AGG | 0.528673 | 2_3:+35583262 | Msa0289390:CDS |
| GTTACTTCGGGTACTGGCAC+AGG | 0.529579 | 2_3:+35583670 | Msa0289390:CDS |
| CTCTCCGGAAGATATTCAAT+GGG | 0.530818 | 2_3:+35585385 | Msa0289390:CDS |
| TTCCAACAGAAGAAGATGGC+TGG | 0.531524 | 2_3:-35583361 | None:intergenic |
| TGTCCAGAACTCAGCACACT+GGG | 0.531670 | 2_3:-35583203 | None:intergenic |
| CCCCAAATCTTAATCATCAT+GGG | 0.536554 | 2_3:+35586883 | Msa0289390:three_prime_UTR |
| CACAATCTGGTCTATGACAT+GGG | 0.537543 | 2_3:+35583900 | Msa0289390:CDS |
| AAGGTGCTCCTGGTAATACT+TGG | 0.538548 | 2_3:-35583591 | None:intergenic |
| CTTGTAACCGCAGATCTCTC+CGG | 0.540537 | 2_3:+35585370 | Msa0289390:intron |
| ATGTCATACCCCAGGATGTA+CGG | 0.542230 | 2_3:+35582743 | Msa0289390:CDS |
| TTTCAATATTATTTCTAGGG+AGG | 0.543126 | 2_3:-35581015 | None:intergenic |
| TCAAATTCACCAACTTGAGC+AGG | 0.543941 | 2_3:+35582784 | Msa0289390:CDS |
| AAGAGGTAGGGGAGGTACAA+AGG | 0.547461 | 2_3:+35585499 | Msa0289390:CDS |
| TAATCCATAGCCAGATTTCA+CGG | 0.548341 | 2_3:-35581253 | None:intergenic |
| ACCATAAGATTGTGATGGTA+CGG | 0.550660 | 2_3:-35583294 | None:intergenic |
| ACGGGCTGGGGATGAAATGA+AGG | 0.550737 | 2_3:-35583326 | None:intergenic |
| CCGGAAGATATTCAATGGGT+AGG | 0.552057 | 2_3:+35585389 | Msa0289390:CDS |
| ATCAAAATAGAATTCCTAGA+GGG | 0.552953 | 2_3:+35582681 | Msa0289390:CDS |
| TACAAGCAGAAGCTGATCCT+AGG | 0.553253 | 2_3:-35586758 | None:intergenic |
| AAAGTGAAAGAGAATGAGGA+AGG | 0.556604 | 2_3:-35581182 | None:intergenic |
| TTCATTTCATCCCCAGCCCG+TGG | 0.558407 | 2_3:+35583328 | Msa0289390:CDS |
| ACAGAAGAAGATGGCTGGTG+GGG | 0.563016 | 2_3:-35583356 | None:intergenic |
| AATCCATAGCCAGATTTCAC+GGG | 0.564228 | 2_3:-35581252 | None:intergenic |
| CCCATGATGATTAAGATTTG+GGG | 0.565451 | 2_3:-35586883 | None:intergenic |
| TCCAGGCGCTGGAAGAGGTA+GGG | 0.566490 | 2_3:+35585487 | Msa0289390:CDS |
| GTGAAAGAGAATGAGGAAGG+AGG | 0.567437 | 2_3:-35581179 | None:intergenic |
| TCTTCTTCTGTTGGAAAACG+TGG | 0.568821 | 2_3:+35583368 | Msa0289390:CDS |
| ATGTCCAGAACTCAGCACAC+TGG | 0.569046 | 2_3:-35583204 | None:intergenic |
| TTCAAGGAAGCAAAAGTCAC+GGG | 0.571010 | 2_3:+35586649 | Msa0289390:three_prime_UTR |
| GAGGTAGGGGAGGTACAAAG+GGG | 0.571827 | 2_3:+35585501 | Msa0289390:CDS |
| AGGCTTGCAGATCTTTCTGA+TGG | 0.572035 | 2_3:+35585925 | Msa0289390:CDS |
| CGTGGGATGAATAGGTCTGT+AGG | 0.575629 | 2_3:+35585452 | Msa0289390:CDS |
| AACAGAAGAAGATGGCTGGT+GGG | 0.578561 | 2_3:-35583357 | None:intergenic |
| ATGATGTCATACGAAGGATA+AGG | 0.581095 | 2_3:+35583040 | Msa0289390:CDS |
| AGAACTAAGATTATCAAATG+AGG | 0.581607 | 2_3:+35582984 | Msa0289390:CDS |
| TGAGTTTCGATTTGTCGTGT+CGG | 0.583372 | 2_3:-35581090 | None:intergenic |
| TAGGTTCGATGTCATACCCC+AGG | 0.585808 | 2_3:+35582735 | Msa0289390:CDS |
| CTCTTATCGATGCAATTGCA+AGG | 0.587215 | 2_3:+35585905 | Msa0289390:CDS |
| TGGGGATGAAATGAAGGAGA+AGG | 0.587707 | 2_3:-35583320 | None:intergenic |
| ATGCAGGGCCAAGTATTACC+AGG | 0.589351 | 2_3:+35583583 | Msa0289390:intron |
| CAACAGAAGAAGATGGCTGG+TGG | 0.590040 | 2_3:-35583358 | None:intergenic |
| AATACCCTTCTTCGGGACCA+GGG | 0.590984 | 2_3:+35583623 | Msa0289390:CDS |
| GCATCAATTGATCCACTCGT+TGG | 0.592131 | 2_3:+35583709 | Msa0289390:CDS |
| GGCACAGGTGAGCTTGCTGA+GGG | 0.592343 | 2_3:+35583685 | Msa0289390:CDS |
| TACCATCACAATCTTATGGT+GGG | 0.594162 | 2_3:+35583297 | Msa0289390:CDS |
| TGGCACAGGTGAGCTTGCTG+AGG | 0.594365 | 2_3:+35583684 | Msa0289390:CDS |
| AGCTTACCACTACTATCGTA+AGG | 0.596626 | 2_3:-35581280 | None:intergenic |
| GCACAATCTGGTCTATGACA+TGG | 0.596902 | 2_3:+35583899 | Msa0289390:CDS |
| GGGAATGGGCGATCTGCAGT+AGG | 0.597765 | 2_3:+35582716 | Msa0289390:CDS |
| TACATCTACTGGATTGTAGT+CGG | 0.599461 | 2_3:-35583788 | None:intergenic |
| GCAAGAAAGTACGAACAAGA+TGG | 0.604041 | 2_3:+35583731 | Msa0289390:CDS |
| TATACGCGTCCTGCTCAAGT+TGG | 0.614385 | 2_3:-35582793 | None:intergenic |
| ATTCAAGGAAGCAAAAGTCA+CGG | 0.617397 | 2_3:+35586648 | Msa0289390:three_prime_UTR |
| TCAAGCTGATGCCATTACTT+GGG | 0.618960 | 2_3:+35582841 | Msa0289390:CDS |
| CGTTGTAAAATGGGAAAAGG+AGG | 0.620575 | 2_3:+35586624 | Msa0289390:three_prime_UTR |
| TTGAGGGTAAGATTTGACCT+AGG | 0.621339 | 2_3:+35586741 | Msa0289390:three_prime_UTR |
| TTCCAGGCGCTGGAAGAGGT+AGG | 0.621453 | 2_3:+35585486 | Msa0289390:CDS |
| AGATATTCAATGGGTAGGGG+AGG | 0.622945 | 2_3:+35585394 | Msa0289390:CDS |
| AAGCGAAGTACAGAGATCGA+AGG | 0.629562 | 2_3:-35581229 | None:intergenic |
| GGAAGATATTCAATGGGTAG+GGG | 0.632331 | 2_3:+35585391 | Msa0289390:CDS |
| ATACCCTTCTTCGGGACCAG+GGG | 0.638170 | 2_3:+35583624 | Msa0289390:CDS |
| GGACCTGTTCCAGGAACTAA+GGG | 0.641860 | 2_3:+35583389 | Msa0289390:CDS |
| CAATTTCACCGTACATCCTG+GGG | 0.645515 | 2_3:-35582751 | None:intergenic |
| GGCGCTGGAAGAGGTAGGGG+AGG | 0.649489 | 2_3:+35585491 | Msa0289390:CDS |
| GGCCCACCATAAGATTGTGA+TGG | 0.650903 | 2_3:-35583299 | None:intergenic |
| TAAGATTGTGATGGTACGGA+CGG | 0.655045 | 2_3:-35583290 | None:intergenic |
| TACCCTTCTTCGGGACCAGG+GGG | 0.660578 | 2_3:+35583625 | Msa0289390:CDS |
| TACGAACCTTACGATAGTAG+TGG | 0.662698 | 2_3:+35581274 | Msa0289390:CDS |
| TGACATCATCTGCATTAACA+CGG | 0.665820 | 2_3:-35583026 | None:intergenic |
| GGAATGGGTTAATCTGTCAG+AGG | 0.668396 | 2_3:+35583941 | Msa0289390:CDS |
| GTACCATCACAATCTTATGG+TGG | 0.670093 | 2_3:+35583296 | Msa0289390:CDS |
| TCAAAATAGAATTCCTAGAG+GGG | 0.671510 | 2_3:+35582682 | Msa0289390:CDS |
| CATCAAAATAGAATTCCTAG+AGG | 0.671706 | 2_3:+35582680 | Msa0289390:CDS |
| GATGTACGGTGAAATTGACA+TGG | 0.674935 | 2_3:+35582757 | Msa0289390:CDS |
| AGGGAGTGGAGACAGACAGG+AGG | 0.700855 | 2_3:+35583173 | Msa0289390:intron |
| ATGCAGATGATGTCATACGA+AGG | 0.702583 | 2_3:+35583034 | Msa0289390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTCAATATTATTTCTA+GGG | - | chr2_3:35581021-35581040 | None:intergenic | 10.0% |
| !!! | TTTTTTTCAATATTATTTCT+AGG | - | chr2_3:35581022-35581041 | None:intergenic | 10.0% |
| !! | TTAAAAAAGATTGAAAATTT+AGG | - | chr2_3:35581345-35581364 | None:intergenic | 10.0% |
| !!! | AAATTTTCAATCTTTTTTAA+TGG | + | chr2_3:35581345-35581364 | Msa0289390:intron | 10.0% |
| !!! | AATTTTCAATCTTTTTTAAT+GGG | + | chr2_3:35581346-35581365 | Msa0289390:intron | 10.0% |
| !! | TTATATACATATAAATTCAT+TGG | + | chr2_3:35582616-35582635 | Msa0289390:intron | 10.0% |
| !!! | TATTTTGAAATTTTTTAATC+AGG | + | chr2_3:35582893-35582912 | Msa0289390:intron | 10.0% |
| !!! | ATTTTATAACATGTTAAATT+AGG | + | chr2_3:35584920-35584939 | Msa0289390:intron | 10.0% |
| !!! | AATTACATATTATTTTTACA+TGG | - | chr2_3:35585167-35585186 | None:intergenic | 10.0% |
| !!! | ATGGAAAATATTTAAATTTT+TGG | + | chr2_3:35585676-35585695 | Msa0289390:intron | 10.0% |
| !!! | TGGAAAATATTTAAATTTTT+GGG | + | chr2_3:35585677-35585696 | Msa0289390:intron | 10.0% |
| !! | AAATTAAAATTAAAATGCTA+TGG | + | chr2_3:35586034-35586053 | Msa0289390:intron | 10.0% |
| !! | AAAAATAAGAAAAGAAAAGA+AGG | + | chr2_3:35581037-35581056 | Msa0289390:five_prime_UTR | 15.0% |
| !!! | TTGTTTTGATTGATTTAATT+AGG | + | chr2_3:35581402-35581421 | Msa0289390:intron | 15.0% |
| !!! | TGTTTTGATTGATTTAATTA+GGG | + | chr2_3:35581403-35581422 | Msa0289390:intron | 15.0% |
| !!! | TGAAGTATTTTTTTTTTCTA+TGG | + | chr2_3:35581681-35581700 | Msa0289390:intron | 15.0% |
| !! | TCTAATGTAATAATTTCTTT+AGG | + | chr2_3:35584501-35584520 | Msa0289390:intron | 15.0% |
| !!! | GCATTTTAATTTTAATTTAG+AGG | - | chr2_3:35586032-35586051 | None:intergenic | 15.0% |
| !!! | TTGGTAATAATTATTTATTG+AGG | + | chr2_3:35586724-35586743 | Msa0289390:three_prime_UTR | 15.0% |
| !! | TGGTAATAATTATTTATTGA+GGG | + | chr2_3:35586725-35586744 | Msa0289390:three_prime_UTR | 15.0% |
| !! | TAATTTAATACAGCAAATAT+AGG | - | chr2_3:35586811-35586830 | None:intergenic | 15.0% |
| !! | TGAAAATTTAGGAATAATGA+GGG | - | chr2_3:35581334-35581353 | None:intergenic | 20.0% |
| !! | TTGAAAATTTAGGAATAATG+AGG | - | chr2_3:35581335-35581354 | None:intergenic | 20.0% |
| !!! | TCTTTCAATTTTAGGATTTA+GGG | + | chr2_3:35581371-35581390 | Msa0289390:intron | 20.0% |
| !! | TAGCATAAAACTACTAATTT+GGG | - | chr2_3:35581447-35581466 | None:intergenic | 20.0% |
| !! | ATAGCATAAAACTACTAATT+TGG | - | chr2_3:35581448-35581467 | None:intergenic | 20.0% |
| !! | ATTACACATACTACATAAAA+CGG | - | chr2_3:35581497-35581516 | None:intergenic | 20.0% |
| !!! | TTTTATGTAGTATGTGTAAT+TGG | + | chr2_3:35581497-35581516 | Msa0289390:intron | 20.0% |
| !!! | TTAAGAGTGTGATTAAATTA+TGG | + | chr2_3:35581528-35581547 | Msa0289390:intron | 20.0% |
| !!! | TTTTGATTGTTATTGAACAT+AGG | + | chr2_3:35581563-35581582 | Msa0289390:intron | 20.0% |
| !!! | TTTGATTGTTATTGAACATA+GGG | + | chr2_3:35581564-35581583 | Msa0289390:intron | 20.0% |
| !!! | TTGAAAATTTGAAATTGCTT+TGG | + | chr2_3:35581907-35581926 | Msa0289390:intron | 20.0% |
| !! | TGTTATCTTGAATAATTTGA+TGG | + | chr2_3:35581971-35581990 | Msa0289390:intron | 20.0% |
| !! | TCTGATAAAATTGTAAAACT+TGG | + | chr2_3:35583063-35583082 | Msa0289390:intron | 20.0% |
| !!! | GTTGTTAATCAACATTTTAT+TGG | + | chr2_3:35583139-35583158 | Msa0289390:intron | 20.0% |
| !!! | TTTTATTGGATGTTGATTTA+AGG | + | chr2_3:35583153-35583172 | Msa0289390:intron | 20.0% |
| !!! | TTTATTGGATGTTGATTTAA+GGG | + | chr2_3:35583154-35583173 | Msa0289390:intron | 20.0% |
| !! | TCTAACTCTTAATTTAAAGA+TGG | - | chr2_3:35584358-35584377 | None:intergenic | 20.0% |
| !! | ATCTTTATTAGAAAGAACTA+GGG | - | chr2_3:35584676-35584695 | None:intergenic | 20.0% |
| !! | TATCTTTATTAGAAAGAACT+AGG | - | chr2_3:35584677-35584696 | None:intergenic | 20.0% |
| !! | TAACATGTTAAATTAGGATT+TGG | + | chr2_3:35584926-35584945 | Msa0289390:intron | 20.0% |
| !! | TATAAAAAAAATTCAGAACG+AGG | - | chr2_3:35584974-35584993 | None:intergenic | 20.0% |
| !! | TAAATGTTATTGAACAATCA+AGG | - | chr2_3:35585288-35585307 | None:intergenic | 20.0% |
| !! | AAGAACATAAGATAAATTAG+CGG | - | chr2_3:35585830-35585849 | None:intergenic | 20.0% |
| !! | CAATTTAATGAATTAACTAC+AGG | + | chr2_3:35585870-35585889 | Msa0289390:intron | 20.0% |
| !!! | TAAATAGAAGTACAATAGTT+TGG | + | chr2_3:35586203-35586222 | Msa0289390:intron | 20.0% |
| !! | ATAGACAAAAGTGAAAAATA+TGG | - | chr2_3:35586383-35586402 | None:intergenic | 20.0% |
| !! | TTTAAAAAAGTAGTGAATAC+TGG | - | chr2_3:35586430-35586449 | None:intergenic | 20.0% |
| !! | ATCAATTATATTCAGTAAAG+TGG | + | chr2_3:35586461-35586480 | Msa0289390:intron | 20.0% |
| !! | TATCTTATTGTTTATACAGA+TGG | + | chr2_3:35586544-35586563 | Msa0289390:intron | 20.0% |
| !! | ATCTTATTGTTTATACAGAT+GGG | + | chr2_3:35586545-35586564 | Msa0289390:intron | 20.0% |
| !!! | TTCAATATTATTTCTAGGGA+GGG | - | chr2_3:35581017-35581036 | None:intergenic | 25.0% |
| !!! | TTTCAATATTATTTCTAGGG+AGG | - | chr2_3:35581018-35581037 | None:intergenic | 25.0% |
| !!! | CTCTTTCAATTTTAGGATTT+AGG | + | chr2_3:35581370-35581389 | Msa0289390:intron | 25.0% |
| !!! | AATTTTAGGATTTAGGGTTA+GGG | + | chr2_3:35581377-35581396 | Msa0289390:intron | 25.0% |
| !!! | GTAGTTTTATGCTATGTTTA+AGG | + | chr2_3:35581453-35581472 | Msa0289390:intron | 25.0% |
| !! | TTGATTGTTATTGAACATAG+GGG | + | chr2_3:35581565-35581584 | Msa0289390:intron | 25.0% |
| !! | TTCAGTTTCATAGTTTTCAT+TGG | + | chr2_3:35581605-35581624 | Msa0289390:intron | 25.0% |
| ! | TAATCATAACAACTAGTTGA+CGG | - | chr2_3:35581950-35581969 | None:intergenic | 25.0% |
| ! | AATCAACAAATTCACAACAT+GGG | - | chr2_3:35582337-35582356 | None:intergenic | 25.0% |
| ! | AAATCAACAAATTCACAACA+TGG | - | chr2_3:35582338-35582357 | None:intergenic | 25.0% |
| ! | GATAATAAATACTGCAGTTA+AGG | - | chr2_3:35582380-35582399 | None:intergenic | 25.0% |
| ! | AGCATTTACTAACTATACAA+AGG | - | chr2_3:35582433-35582452 | None:intergenic | 25.0% |
| ! | TATTTCAAGGATTTATAGTC+TGG | + | chr2_3:35582496-35582515 | Msa0289390:intron | 25.0% |
| ! | ATCAAAATAGAATTCCTAGA+GGG | + | chr2_3:35582681-35582700 | Msa0289390:CDS | 25.0% |
| !! | AAACAACATGTATTTTCTTC+AGG | + | chr2_3:35582930-35582949 | Msa0289390:intron | 25.0% |
| ! | AGAACTAAGATTATCAAATG+AGG | + | chr2_3:35582984-35583003 | Msa0289390:CDS | 25.0% |
| ! | ATTATCAAATGAGGAACATA+GGG | + | chr2_3:35582993-35583012 | Msa0289390:CDS | 25.0% |
| !!! | ATTTTTTAAGCAGCTATGAA+GGG | - | chr2_3:35583503-35583522 | None:intergenic | 25.0% |
| !!! | AATTTTTTAAGCAGCTATGA+AGG | - | chr2_3:35583504-35583523 | None:intergenic | 25.0% |
| ! | CAACACTATTTCATTTACTT+TGG | + | chr2_3:35583551-35583570 | Msa0289390:intron | 25.0% |
| ! | CAAATCTTAAACTGATTAAG+TGG | - | chr2_3:35583821-35583840 | None:intergenic | 25.0% |
| ! | TGTAAATGAATCATTGGAAT+GGG | + | chr2_3:35583926-35583945 | Msa0289390:CDS | 25.0% |
| ! | GAATGTCTAAAGAAATATGT+TGG | + | chr2_3:35584319-35584338 | Msa0289390:intron | 25.0% |
| !!! | AGATGCTAAAAATGTTTTGA+AGG | + | chr2_3:35584845-35584864 | Msa0289390:intron | 25.0% |
| !!! | AATGTTTTGAAGGAAACTAT+TGG | + | chr2_3:35584855-35584874 | Msa0289390:intron | 25.0% |
| !!! | ATGTTTTGAAGGAAACTATT+GGG | + | chr2_3:35584856-35584875 | Msa0289390:intron | 25.0% |
| ! | TTAAATAACAACCACAATTC+AGG | - | chr2_3:35585229-35585248 | None:intergenic | 25.0% |
| ! | TTACAAGACTGTATCTAATT+AGG | - | chr2_3:35585357-35585376 | None:intergenic | 25.0% |
| !!! | TGATGGCAATAAATCTTTTT+TGG | - | chr2_3:35585531-35585550 | None:intergenic | 25.0% |
| !! | GAGATTGTTTAATCTTTTCA+TGG | + | chr2_3:35585657-35585676 | Msa0289390:intron | 25.0% |
| !! | CTTTACCTTCAATATTTTCT+TGG | - | chr2_3:35585766-35585785 | None:intergenic | 25.0% |
| ! | CAAGAAAATATTGAAGGTAA+AGG | + | chr2_3:35585764-35585783 | Msa0289390:intron | 25.0% |
| ! | AATTAAAATGCTATGGAGTA+TGG | + | chr2_3:35586041-35586060 | Msa0289390:intron | 25.0% |
| !! | TACAATAGTTTGGAATAACA+AGG | + | chr2_3:35586213-35586232 | Msa0289390:intron | 25.0% |
| ! | ATATTAAATCGTAGGATGAT+TGG | - | chr2_3:35586343-35586362 | None:intergenic | 25.0% |
| ! | TTTGTCTATTTAAACAACCT+TGG | + | chr2_3:35586394-35586413 | Msa0289390:intron | 25.0% |
| ! | TCTTATTGTTTATACAGATG+GGG | + | chr2_3:35586546-35586565 | Msa0289390:intron | 25.0% |
| ! | TTGATTTAACATGTGAGAAA+TGG | - | chr2_3:35586579-35586598 | None:intergenic | 25.0% |
| ! | TTTCTCACATGTTAAATCAA+TGG | + | chr2_3:35586579-35586598 | Msa0289390:CDS | 25.0% |
| ! | AGGATGACAATTATGTAATT+TGG | + | chr2_3:35586705-35586724 | Msa0289390:three_prime_UTR | 25.0% |
| !! | GTATAAAAAGAGTATGATAG+TGG | + | chr2_3:35586778-35586797 | Msa0289390:three_prime_UTR | 25.0% |
| ! | AATGGGTCTCTTTCAATTTT+AGG | + | chr2_3:35581363-35581382 | Msa0289390:intron | 30.0% |
| !!! | CAATTTTAGGATTTAGGGTT+AGG | + | chr2_3:35581376-35581395 | Msa0289390:intron | 30.0% |
| CATAAAACTACTAATTTGGG+TGG | - | chr2_3:35581444-35581463 | None:intergenic | 30.0% | |
| ! | TGATTGTTATTGAACATAGG+GGG | + | chr2_3:35581566-35581585 | Msa0289390:intron | 30.0% |
| !!! | GTTCTGTTTTGTTTAGCAAA+TGG | + | chr2_3:35581720-35581739 | Msa0289390:intron | 30.0% |
| TATAGTTCAAAATACGCGTT+AGG | - | chr2_3:35581778-35581797 | None:intergenic | 30.0% | |
| CTTTCTTTACCTTAGCAATA+AGG | + | chr2_3:35582006-35582025 | Msa0289390:intron | 30.0% | |
| ! | ATTGTCTATCCATTTGTTGA+CGG | + | chr2_3:35582159-35582178 | Msa0289390:intron | 30.0% |
| CACTTTCAAATATCCTCAAA+TGG | + | chr2_3:35582214-35582233 | Msa0289390:intron | 30.0% | |
| TTAGCCAATATTGTGTCAAA+CGG | - | chr2_3:35582257-35582276 | None:intergenic | 30.0% | |
| ! | TCTGGTTGATGTATATTTCA+AGG | + | chr2_3:35582483-35582502 | Msa0289390:intron | 30.0% |
| ! | TTGTTGTTGTTGTTATAGTC+CGG | + | chr2_3:35582574-35582593 | Msa0289390:intron | 30.0% |
| GTATAATAACAAAGTCAGTC+CGG | - | chr2_3:35582596-35582615 | None:intergenic | 30.0% | |
| !!! | ATTCTATTTTGATGTGTTGG+TGG | - | chr2_3:35582674-35582693 | None:intergenic | 30.0% |
| !!! | GGAATTCTATTTTGATGTGT+TGG | - | chr2_3:35582677-35582696 | None:intergenic | 30.0% |
| CATCAAAATAGAATTCCTAG+AGG | + | chr2_3:35582680-35582699 | Msa0289390:CDS | 30.0% | |
| TCAAAATAGAATTCCTAGAG+GGG | + | chr2_3:35582682-35582701 | Msa0289390:CDS | 30.0% | |
| AAGAAAATGTACCCAAGTAA+TGG | - | chr2_3:35582855-35582874 | None:intergenic | 30.0% | |
| GATTATCAAATGAGGAACAT+AGG | + | chr2_3:35582992-35583011 | Msa0289390:CDS | 30.0% | |
| TGTAAGTAAACATAGAAGTC+CGG | + | chr2_3:35583427-35583446 | Msa0289390:intron | 30.0% | |
| !!! | TTTTTTAAGCAGCTATGAAG+GGG | - | chr2_3:35583502-35583521 | None:intergenic | 30.0% |
| !! | TGAAATAGTGTTGCTTATGT+AGG | - | chr2_3:35583544-35583563 | None:intergenic | 30.0% |
| !!! | ACTTTGGTTCTTTTATATGC+AGG | + | chr2_3:35583567-35583586 | Msa0289390:intron | 30.0% |
| !!! | CTTTGGTTCTTTTATATGCA+GGG | + | chr2_3:35583568-35583587 | Msa0289390:intron | 30.0% |
| AATAAAGCAATACCCTTCTT+CGG | + | chr2_3:35583615-35583634 | Msa0289390:CDS | 30.0% | |
| AGTACCTAATAGAGTTACTT+CGG | + | chr2_3:35583657-35583676 | Msa0289390:CDS | 30.0% | |
| TCATAGAAGTTATTGTCATC+AGG | - | chr2_3:35583757-35583776 | None:intergenic | 30.0% | |
| GTGTAAATGAATCATTGGAA+TGG | + | chr2_3:35583925-35583944 | Msa0289390:CDS | 30.0% | |
| !!! | CTTTTAGTTTCAATTTCGCA+AGG | - | chr2_3:35584053-35584072 | None:intergenic | 30.0% |
| GATCCAAATCCTTTCATAAT+TGG | - | chr2_3:35584399-35584418 | None:intergenic | 30.0% | |
| AATCCTAGGATTCATATGAA+TGG | + | chr2_3:35584443-35584462 | Msa0289390:intron | 30.0% | |
| TTTCCATTCATATGAATCCT+AGG | - | chr2_3:35584449-35584468 | None:intergenic | 30.0% | |
| !! | ATGAATGGAAAAAGTACTAC+TGG | + | chr2_3:35584458-35584477 | Msa0289390:intron | 30.0% |
| !! | TGAATGGAAAAAGTACTACT+GGG | + | chr2_3:35584459-35584478 | Msa0289390:intron | 30.0% |
| GGTAACTTTCAGCATAAATT+CGG | + | chr2_3:35584788-35584807 | Msa0289390:intron | 30.0% | |
| TCATGAATGAATGCATAATG+TGG | + | chr2_3:35585104-35585123 | Msa0289390:intron | 30.0% | |
| GTTAAAGAGGTAACTGAAAA+CGG | + | chr2_3:35585611-35585630 | Msa0289390:intron | 30.0% | |
| !!! | AAATTTTTGGGTAACTTGTC+AGG | + | chr2_3:35585689-35585708 | Msa0289390:intron | 30.0% |
| TTCTCAATTTCATGTACATC+AGG | - | chr2_3:35585741-35585760 | None:intergenic | 30.0% | |
| GAAAGCCAAGAAAATATTGA+AGG | + | chr2_3:35585758-35585777 | Msa0289390:CDS | 30.0% | |
| ! | AATACTGCAAAAGTGCAAAT+AGG | - | chr2_3:35585981-35586000 | None:intergenic | 30.0% |
| !! | GATTTTCACTGATTATTGCT+TGG | + | chr2_3:35586240-35586259 | Msa0289390:intron | 30.0% |
| TGCTTGGTATATTAAATCGT+AGG | - | chr2_3:35586351-35586370 | None:intergenic | 30.0% | |
| TACGATTTAATATACCAAGC+AGG | + | chr2_3:35586350-35586369 | Msa0289390:intron | 30.0% | |
| ACGATTTAATATACCAAGCA+GGG | + | chr2_3:35586351-35586370 | Msa0289390:intron | 30.0% | |
| TAGTGAATACTGGATACTTT+AGG | - | chr2_3:35586420-35586439 | None:intergenic | 30.0% | |
| TTTATACACAGAATCAAGTG+TGG | - | chr2_3:35586509-35586528 | None:intergenic | 30.0% | |
| CTTATTGTTTATACAGATGG+GGG | + | chr2_3:35586547-35586566 | Msa0289390:intron | 30.0% | |
| TCTCTTGTATTCTATCAGAT+AGG | + | chr2_3:35586685-35586704 | Msa0289390:three_prime_UTR | 30.0% | |
| ACCCATGATGATTAAGATTT+GGG | - | chr2_3:35586887-35586906 | None:intergenic | 30.0% | |
| TACCCATGATGATTAAGATT+TGG | - | chr2_3:35586888-35586907 | None:intergenic | 30.0% | |
| ATGAACGAATCGAAGATCTT+AGG | - | chr2_3:35581132-35581151 | None:intergenic | 35.0% | |
| AAAGTGAAAGAGAATGAGGA+AGG | - | chr2_3:35581185-35581204 | None:intergenic | 35.0% | |
| TAATCCATAGCCAGATTTCA+CGG | - | chr2_3:35581256-35581275 | None:intergenic | 35.0% | |
| CATAATCAAGTTCATGGAAC+TGG | - | chr2_3:35581812-35581831 | None:intergenic | 35.0% | |
| AACCGAATAAACCAGTTTAG+CGG | - | chr2_3:35581835-35581854 | None:intergenic | 35.0% | |
| ! | TATTCGGTTGGTATACTAGT+TGG | + | chr2_3:35581846-35581865 | Msa0289390:intron | 35.0% |
| ! | ATTCGGTTGGTATACTAGTT+GGG | + | chr2_3:35581847-35581866 | Msa0289390:intron | 35.0% |
| ! | TGAATAATTTGATGGCCTCT+TGG | + | chr2_3:35581979-35581998 | Msa0289390:intron | 35.0% |
| GGTAAAGAAAGAAAACCAAG+AGG | - | chr2_3:35581997-35582016 | None:intergenic | 35.0% | |
| ! | TTGTCTATCCATTTGTTGAC+GGG | + | chr2_3:35582160-35582179 | Msa0289390:intron | 35.0% |
| AACAAAAAGGTAGCCATTTG+AGG | - | chr2_3:35582230-35582249 | None:intergenic | 35.0% | |
| GTCAAACGGGAAAAACAAAA+AGG | - | chr2_3:35582243-35582262 | None:intergenic | 35.0% | |
| TTTCCCGTTTGACACAATAT+TGG | + | chr2_3:35582250-35582269 | Msa0289390:intron | 35.0% | |
| TAGCCAATATTGTGTCAAAC+GGG | - | chr2_3:35582256-35582275 | None:intergenic | 35.0% | |
| TATGTCAGTGTTACACTGAA+TGG | - | chr2_3:35582293-35582312 | None:intergenic | 35.0% | |
| ! | CAGATTTTACTAAATGCAGC+AGG | - | chr2_3:35582467-35582486 | None:intergenic | 35.0% |
| CTGCTGCATTTAGTAAAATC+TGG | + | chr2_3:35582465-35582484 | Msa0289390:intron | 35.0% | |
| TCATTGGATGTAATGATTGC+AGG | + | chr2_3:35582632-35582651 | Msa0289390:intron | 35.0% | |
| ! | CATGTATTTTCTTCAGGAGA+AGG | + | chr2_3:35582936-35582955 | Msa0289390:intron | 35.0% |
| TGACATCATCTGCATTAACA+CGG | - | chr2_3:35583029-35583048 | None:intergenic | 35.0% | |
| ATGATGTCATACGAAGGATA+AGG | + | chr2_3:35583040-35583059 | Msa0289390:CDS | 35.0% | |
| ACCATAAGATTGTGATGGTA+CGG | - | chr2_3:35583297-35583316 | None:intergenic | 35.0% | |
| TACCATCACAATCTTATGGT+GGG | + | chr2_3:35583297-35583316 | Msa0289390:CDS | 35.0% | |
| GGACTTCTATGTTTACTTAC+AGG | - | chr2_3:35583428-35583447 | None:intergenic | 35.0% | |
| GAGAAGAAGAACAATGTAAC+CGG | - | chr2_3:35583449-35583468 | None:intergenic | 35.0% | |
| !! | GAAGGGTATTGCTTTATTGA+AGG | - | chr2_3:35583613-35583632 | None:intergenic | 35.0% |
| ATAAAGCAATACCCTTCTTC+GGG | + | chr2_3:35583616-35583635 | Msa0289390:CDS | 35.0% | |
| GTACCTAATAGAGTTACTTC+GGG | + | chr2_3:35583658-35583677 | Msa0289390:CDS | 35.0% | |
| TACATCTACTGGATTGTAGT+CGG | - | chr2_3:35583791-35583810 | None:intergenic | 35.0% | |
| ! | GGGAAGTGTAAATGAATCAT+TGG | + | chr2_3:35583920-35583939 | Msa0289390:CDS | 35.0% |
| AGTTTCAATTTCGCAAGGTT+TGG | - | chr2_3:35584048-35584067 | None:intergenic | 35.0% | |
| GTTAGATTTCCAATGTGTGT+TGG | + | chr2_3:35584372-35584391 | Msa0289390:intron | 35.0% | |
| ATAATTGGACCAACACACAT+TGG | - | chr2_3:35584384-35584403 | None:intergenic | 35.0% | |
| ! | TGTGTTGGTCCAATTATGAA+AGG | + | chr2_3:35584387-35584406 | Msa0289390:intron | 35.0% |
| GGTCCAATTATGAAAGGATT+TGG | + | chr2_3:35584393-35584412 | Msa0289390:intron | 35.0% | |
| ATTTGGATCTCATAAGCATG+TGG | + | chr2_3:35584410-35584429 | Msa0289390:intron | 35.0% | |
| TGAATCCTAGGATTTAACTG+AGG | - | chr2_3:35584437-35584456 | None:intergenic | 35.0% | |
| TTTGAGAGAGTTAAGACCTT+TGG | + | chr2_3:35584589-35584608 | Msa0289390:intron | 35.0% | |
| TTGAGAGAGTTAAGACCTTT+GGG | + | chr2_3:35584590-35584609 | Msa0289390:intron | 35.0% | |
| TATAGGTGGCAGAATTTCAA+GGG | - | chr2_3:35584634-35584653 | None:intergenic | 35.0% | |
| GAATTCCCTCAATAGAGTAT+AGG | - | chr2_3:35584651-35584670 | None:intergenic | 35.0% | |
| AAGTTTCTATCACGTATCTC+AGG | + | chr2_3:35584698-35584717 | Msa0289390:intron | 35.0% | |
| ACCAAATTGAGATGTCAAGT+TGG | + | chr2_3:35585048-35585067 | Msa0289390:intron | 35.0% | |
| CTTTCAGTAATCCTGAATTG+TGG | + | chr2_3:35585215-35585234 | Msa0289390:intron | 35.0% | |
| GATTTATTGCCATCACAGAA+TGG | + | chr2_3:35585536-35585555 | Msa0289390:CDS | 35.0% | |
| ACAGAATGGAATCGGAAAAA+AGG | + | chr2_3:35585550-35585569 | Msa0289390:CDS | 35.0% | |
| CAGTAAAATAAATGGCAGAC+TGG | - | chr2_3:35585803-35585822 | None:intergenic | 35.0% | |
| GGGTGTAGTGTAACAAATTA+TGG | - | chr2_3:35586315-35586334 | None:intergenic | 35.0% | |
| CGATTTAATATACCAAGCAG+GGG | + | chr2_3:35586352-35586371 | Msa0289390:intron | 35.0% | |
| TGAACACCTACGTTGTAAAA+TGG | + | chr2_3:35586614-35586633 | Msa0289390:three_prime_UTR | 35.0% | |
| GAACACCTACGTTGTAAAAT+GGG | + | chr2_3:35586615-35586634 | Msa0289390:three_prime_UTR | 35.0% | |
| ! | CTTTTCCCATTTTACAACGT+AGG | - | chr2_3:35586623-35586642 | None:intergenic | 35.0% |
| CTACGTTGTAAAATGGGAAA+AGG | + | chr2_3:35586621-35586640 | Msa0289390:three_prime_UTR | 35.0% | |
| ATTCAAGGAAGCAAAAGTCA+CGG | + | chr2_3:35586648-35586667 | Msa0289390:three_prime_UTR | 35.0% | |
| CACCATTTATTCACAAGACT+TGG | + | chr2_3:35586839-35586858 | Msa0289390:three_prime_UTR | 35.0% | |
| ! | CACCAAGTCTTGTGAATAAA+TGG | - | chr2_3:35586844-35586863 | None:intergenic | 35.0% |
| ACCCCAAATCTTAATCATCA+TGG | + | chr2_3:35586882-35586901 | Msa0289390:three_prime_UTR | 35.0% | |
| CCCATGATGATTAAGATTTG+GGG | - | chr2_3:35586886-35586905 | None:intergenic | 35.0% | |
| CCCCAAATCTTAATCATCAT+GGG | + | chr2_3:35586883-35586902 | Msa0289390:three_prime_UTR | 35.0% | |
| ! | TGAGTTTCGATTTGTCGTGT+CGG | - | chr2_3:35581093-35581112 | None:intergenic | 40.0% |
| GAGTAGAGGAACAATGATTG+AGG | - | chr2_3:35581160-35581179 | None:intergenic | 40.0% | |
| AGCGAAAGTGAAAGAGAATG+AGG | - | chr2_3:35581189-35581208 | None:intergenic | 40.0% | |
| AATCCATAGCCAGATTTCAC+GGG | - | chr2_3:35581255-35581274 | None:intergenic | 40.0% | |
| TACGAACCTTACGATAGTAG+TGG | + | chr2_3:35581274-35581293 | Msa0289390:CDS | 40.0% | |
| AGCTTACCACTACTATCGTA+AGG | - | chr2_3:35581283-35581302 | None:intergenic | 40.0% | |
| TTATTGAACATAGGGGGCTA+TGG | + | chr2_3:35581572-35581591 | Msa0289390:intron | 40.0% | |
| TAGCGGCATAATCAAGTTCA+TGG | - | chr2_3:35581818-35581837 | None:intergenic | 40.0% | |
| ACTTGATTATGCCGCTAAAC+TGG | + | chr2_3:35581821-35581840 | Msa0289390:intron | 40.0% | |
| ! | TGCCGCTAAACTGGTTTATT+CGG | + | chr2_3:35581830-35581849 | Msa0289390:intron | 40.0% |
| ! | GCTAAACTGGTTTATTCGGT+TGG | + | chr2_3:35581834-35581853 | Msa0289390:intron | 40.0% |
| TTGGTATACTAGTTGGGAAC+TGG | + | chr2_3:35581853-35581872 | Msa0289390:intron | 40.0% | |
| TGGTATACTAGTTGGGAACT+GGG | + | chr2_3:35581854-35581873 | Msa0289390:intron | 40.0% | |
| AACAACTAGTTGACGGTCTT+TGG | - | chr2_3:35581943-35581962 | None:intergenic | 40.0% | |
| AAAGTCGCACCTTATTGCTA+AGG | - | chr2_3:35582018-35582037 | None:intergenic | 40.0% | |
| ! | GCGACTTTTCTGAACTAGAA+AGG | + | chr2_3:35582030-35582049 | Msa0289390:intron | 40.0% |
| GGTGATATCGGACTCTATAT+TGG | + | chr2_3:35582095-35582114 | Msa0289390:intron | 40.0% | |
| ! | TGTCTATCCATTTGTTGACG+GGG | + | chr2_3:35582161-35582180 | Msa0289390:intron | 40.0% |
| CAGTGTTACACTGAATGGTA+GGG | - | chr2_3:35582288-35582307 | None:intergenic | 40.0% | |
| TCAGTGTTACACTGAATGGT+AGG | - | chr2_3:35582289-35582308 | None:intergenic | 40.0% | |
| TTGTTGCATTGAGTAGATCG+TGG | + | chr2_3:35582407-35582426 | Msa0289390:intron | 40.0% | |
| TCAATTTCACCGTACATCCT+GGG | - | chr2_3:35582755-35582774 | None:intergenic | 40.0% | |
| GATGTACGGTGAAATTGACA+TGG | + | chr2_3:35582757-35582776 | Msa0289390:CDS | 40.0% | |
| TCAAATTCACCAACTTGAGC+AGG | + | chr2_3:35582784-35582803 | Msa0289390:CDS | 40.0% | |
| TCAAGCTGATGCCATTACTT+GGG | + | chr2_3:35582841-35582860 | Msa0289390:CDS | 40.0% | |
| ATGCAGATGATGTCATACGA+AGG | + | chr2_3:35583034-35583053 | Msa0289390:CDS | 40.0% | |
| !! | TGGATGTTGATTTAAGGGAG+TGG | + | chr2_3:35583159-35583178 | Msa0289390:intron | 40.0% |
| TGCTTCTCGTAAGAAGCAAA+AGG | + | chr2_3:35583262-35583281 | Msa0289390:CDS | 40.0% | |
| TAAGATTGTGATGGTACGGA+CGG | - | chr2_3:35583293-35583312 | None:intergenic | 40.0% | |
| TCCGTACCATCACAATCTTA+TGG | + | chr2_3:35583293-35583312 | Msa0289390:CDS | 40.0% | |
| GTACCATCACAATCTTATGG+TGG | + | chr2_3:35583296-35583315 | Msa0289390:CDS | 40.0% | |
| ! | CGTTTTCCAACAGAAGAAGA+TGG | - | chr2_3:35583368-35583387 | None:intergenic | 40.0% |
| TCTTCTTCTGTTGGAAAACG+TGG | + | chr2_3:35583368-35583387 | Msa0289390:CDS | 40.0% | |
| TAGTTTATCTGCAGTGAGCT+TGG | + | chr2_3:35583470-35583489 | Msa0289390:intron | 40.0% | |
| GCTTATGTAGGCTTGAATAG+TGG | - | chr2_3:35583532-35583551 | None:intergenic | 40.0% | |
| GTACCCGAAGTAACTCTATT+AGG | - | chr2_3:35583664-35583683 | None:intergenic | 40.0% | |
| AATAGAGTTACTTCGGGTAC+TGG | + | chr2_3:35583664-35583683 | Msa0289390:CDS | 40.0% | |
| ! | GCAAGAAAGTACGAACAAGA+TGG | + | chr2_3:35583731-35583750 | Msa0289390:CDS | 40.0% |
| GTGGATGTAAGTACATCTAC+TGG | - | chr2_3:35583802-35583821 | None:intergenic | 40.0% | |
| CACAATCTGGTCTATGACAT+GGG | + | chr2_3:35583900-35583919 | Msa0289390:CDS | 40.0% | |
| ! | GTCTTTGAGTAGAGTTCTGA+AGG | + | chr2_3:35584247-35584266 | Msa0289390:intron | 40.0% |
| GCTAACATCACTAACTACAG+AGG | - | chr2_3:35584529-35584548 | None:intergenic | 40.0% | |
| ! | TAGTTAGTGATGTTAGCCTG+TGG | + | chr2_3:35584532-35584551 | Msa0289390:intron | 40.0% |
| AGTTAAGACCTTTGGGCATT+AGG | + | chr2_3:35584597-35584616 | Msa0289390:intron | 40.0% | |
| GTATAGGTGGCAGAATTTCA+AGG | - | chr2_3:35584635-35584654 | None:intergenic | 40.0% | |
| TGCCACCTATACTCTATTGA+GGG | + | chr2_3:35584643-35584662 | Msa0289390:intron | 40.0% | |
| TTCCCTCAATAGAGTATAGG+TGG | - | chr2_3:35584648-35584667 | None:intergenic | 40.0% | |
| AGATCTGTCTCTTACCTACT+GGG | + | chr2_3:35584721-35584740 | Msa0289390:intron | 40.0% | |
| !!! | ATCCCAGCCCACATTTTTTT+GGG | - | chr2_3:35584762-35584781 | None:intergenic | 40.0% |
| GCCAACTTGACATCTCAATT+TGG | - | chr2_3:35585052-35585071 | None:intergenic | 40.0% | |
| ATCAAGGTACACGAGAATAG+CGG | - | chr2_3:35585272-35585291 | None:intergenic | 40.0% | |
| GACTGTATCTAATTAGGTGC+TGG | - | chr2_3:35585351-35585370 | None:intergenic | 40.0% | |
| TCTCTCCGGAAGATATTCAA+TGG | + | chr2_3:35585384-35585403 | Msa0289390:CDS | 40.0% | |
| CTCTCCGGAAGATATTCAAT+GGG | + | chr2_3:35585385-35585404 | Msa0289390:CDS | 40.0% | |
| CCTACCCATTGAATATCTTC+CGG | - | chr2_3:35585392-35585411 | None:intergenic | 40.0% | |
| CGGAAGATATTCAATGGGTA+GGG | + | chr2_3:35585390-35585409 | Msa0289390:CDS | 40.0% | |
| GGAAGATATTCAATGGGTAG+GGG | + | chr2_3:35585391-35585410 | Msa0289390:CDS | 40.0% | |
| ! | CTGGAATCAACCATCGTTTT+GGG | + | chr2_3:35585420-35585439 | Msa0289390:CDS | 40.0% |
| ! | TGGAATCAACCATCGTTTTG+GGG | + | chr2_3:35585421-35585440 | Msa0289390:CDS | 40.0% |
| TTGCCATCACAGAATGGAAT+CGG | + | chr2_3:35585542-35585561 | Msa0289390:CDS | 40.0% | |
| TTTCCGATTCCATTCTGTGA+TGG | - | chr2_3:35585548-35585567 | None:intergenic | 40.0% | |
| CACAGACACACTAGTTAAAG+AGG | + | chr2_3:35585598-35585617 | Msa0289390:CDS | 40.0% | |
| !!! | TTTTTGGGTAACTTGTCAGG+TGG | + | chr2_3:35585692-35585711 | Msa0289390:intron | 40.0% |
| GCGGCTAGCAGTAAAATAAA+TGG | - | chr2_3:35585811-35585830 | None:intergenic | 40.0% | |
| CTCTTATCGATGCAATTGCA+AGG | + | chr2_3:35585905-35585924 | Msa0289390:CDS | 40.0% | |
| ! | GATCTTTCTGATGGCGATAA+TGG | + | chr2_3:35585934-35585953 | Msa0289390:CDS | 40.0% |
| ATGGAGTATGGACTTCGTTT+AGG | + | chr2_3:35586053-35586072 | Msa0289390:intron | 40.0% | |
| AATTATGGCCACTGTTTCCA+CGG | - | chr2_3:35586300-35586319 | None:intergenic | 40.0% | |
| ATCGTAGGATGATTGGAAGT+GGG | - | chr2_3:35586336-35586355 | None:intergenic | 40.0% | |
| AATCGTAGGATGATTGGAAG+TGG | - | chr2_3:35586337-35586356 | None:intergenic | 40.0% | |
| ATACTGGATACTTTAGGCCA+AGG | - | chr2_3:35586414-35586433 | None:intergenic | 40.0% | |
| ATTGTTTATACAGATGGGGG+CGG | + | chr2_3:35586550-35586569 | Msa0289390:intron | 40.0% | |
| CGTTGTAAAATGGGAAAAGG+AGG | + | chr2_3:35586624-35586643 | Msa0289390:three_prime_UTR | 40.0% | |
| TTCAAGGAAGCAAAAGTCAC+GGG | + | chr2_3:35586649-35586668 | Msa0289390:three_prime_UTR | 40.0% | |
| TTGAGGGTAAGATTTGACCT+AGG | + | chr2_3:35586741-35586760 | Msa0289390:three_prime_UTR | 40.0% | |
| GGACTCGGAAACTGAGTTAT+TGG | - | chr2_3:35581072-35581091 | None:intergenic | 45.0% | |
| GTGAAAGAGAATGAGGAAGG+AGG | - | chr2_3:35581182-35581201 | None:intergenic | 45.0% | |
| AAGCGAAGTACAGAGATCGA+AGG | - | chr2_3:35581232-35581251 | None:intergenic | 45.0% | |
| AACATAGGGGGCTATGGTAT+TGG | + | chr2_3:35581578-35581597 | Msa0289390:intron | 45.0% | |
| ! | GTCTATCCATTTGTTGACGG+GGG | + | chr2_3:35582162-35582181 | Msa0289390:intron | 45.0% |
| CTAAATCCCCCGTCAACAAA+TGG | - | chr2_3:35582171-35582190 | None:intergenic | 45.0% | |
| ! | GGACTGACTTTGATCCATGT+AGG | + | chr2_3:35582517-35582536 | Msa0289390:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr2_3:35582546-35582565 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr2_3:35582547-35582566 | None:intergenic | 45.0% |
| ATGTCATACCCCAGGATGTA+CGG | + | chr2_3:35582743-35582762 | Msa0289390:CDS | 45.0% | |
| CAATTTCACCGTACATCCTG+GGG | - | chr2_3:35582754-35582773 | None:intergenic | 45.0% | |
| GTCAATTTCACCGTACATCC+TGG | - | chr2_3:35582756-35582775 | None:intergenic | 45.0% | |
| ! | GGCATCAGCTTGAGCTTTAA+AGG | - | chr2_3:35582834-35582853 | None:intergenic | 45.0% |
| CTCAAGCTGATGCCATTACT+TGG | + | chr2_3:35582840-35582859 | Msa0289390:CDS | 45.0% | |
| GAGGAACATAGGGAACTTCT+AGG | + | chr2_3:35583003-35583022 | Msa0289390:CDS | 45.0% | |
| TTACGAGAAGCAGAGACTGT+TGG | - | chr2_3:35583254-35583273 | None:intergenic | 45.0% | |
| TGGGGATGAAATGAAGGAGA+AGG | - | chr2_3:35583323-35583342 | None:intergenic | 45.0% | |
| AACAGAAGAAGATGGCTGGT+GGG | - | chr2_3:35583360-35583379 | None:intergenic | 45.0% | |
| TTCCAACAGAAGAAGATGGC+TGG | - | chr2_3:35583364-35583383 | None:intergenic | 45.0% | |
| ! | AAGGTGCTCCTGGTAATACT+TGG | - | chr2_3:35583594-35583613 | None:intergenic | 45.0% |
| !! | TGCTTTATTGAAGGTGCTCC+TGG | - | chr2_3:35583604-35583623 | None:intergenic | 45.0% |
| GCATCAATTGATCCACTCGT+TGG | + | chr2_3:35583709-35583728 | Msa0289390:CDS | 45.0% | |
| TGCAGACGCTGAAAAGTTAG+AGG | - | chr2_3:35583882-35583901 | None:intergenic | 45.0% | |
| ! | TTTTCAGCGTCTGCACAATC+TGG | + | chr2_3:35583887-35583906 | Msa0289390:intron | 45.0% |
| GCACAATCTGGTCTATGACA+TGG | + | chr2_3:35583899-35583918 | Msa0289390:CDS | 45.0% | |
| !! | GGAATGGGTTAATCTGTCAG+AGG | + | chr2_3:35583941-35583960 | Msa0289390:CDS | 45.0% |
| GTGGTCCTCAGTTAAATCCT+AGG | + | chr2_3:35584429-35584448 | Msa0289390:intron | 45.0% | |
| ACTGGGATGTGCTCAAACTT+TGG | + | chr2_3:35584476-35584495 | Msa0289390:intron | 45.0% | |
| TATGTCCTTGTATGCACCAC+AGG | - | chr2_3:35584551-35584570 | None:intergenic | 45.0% | |
| GTGCATACAAGGACATAGAC+TGG | + | chr2_3:35584554-35584573 | Msa0289390:intron | 45.0% | |
| CTGCCACCTATACTCTATTG+AGG | + | chr2_3:35584642-35584661 | Msa0289390:intron | 45.0% | |
| GAGATCTGTCTCTTACCTAC+TGG | + | chr2_3:35584720-35584739 | Msa0289390:intron | 45.0% | |
| CTACTGGGTAAAATGCTCCA+GGG | + | chr2_3:35584736-35584755 | Msa0289390:intron | 45.0% | |
| TCCAGGGCCCAAAAAAATGT+GGG | + | chr2_3:35584752-35584771 | Msa0289390:intron | 45.0% | |
| !!! | CATCCCAGCCCACATTTTTT+TGG | - | chr2_3:35584763-35584782 | None:intergenic | 45.0% |
| ATATCTTCCGGAGAGATCTG+CGG | - | chr2_3:35585380-35585399 | None:intergenic | 45.0% | |
| CCGGAAGATATTCAATGGGT+AGG | + | chr2_3:35585389-35585408 | Msa0289390:CDS | 45.0% | |
| AGATATTCAATGGGTAGGGG+AGG | + | chr2_3:35585394-35585413 | Msa0289390:CDS | 45.0% | |
| ! | CCAAAACGATGGTTGATTCC+AGG | - | chr2_3:35585422-35585441 | None:intergenic | 45.0% |
| ! | CCTGGAATCAACCATCGTTT+TGG | + | chr2_3:35585419-35585438 | Msa0289390:CDS | 45.0% |
| ! | GGAATCAACCATCGTTTTGG+GGG | + | chr2_3:35585422-35585441 | Msa0289390:CDS | 45.0% |
| TGGAATCGGAAAAAAGGCTC+TGG | + | chr2_3:35585556-35585575 | Msa0289390:CDS | 45.0% | |
| ! | GGTAACTTGTCAGGTGGAAA+GGG | + | chr2_3:35585698-35585717 | Msa0289390:intron | 45.0% |
| AGGCTTGCAGATCTTTCTGA+TGG | + | chr2_3:35585925-35585944 | Msa0289390:CDS | 45.0% | |
| TTCATCTTACTTCCATGCCG+TGG | + | chr2_3:35586280-35586299 | Msa0289390:intron | 45.0% | |
| TCGTAGGATGATTGGAAGTG+GGG | - | chr2_3:35586335-35586354 | None:intergenic | 45.0% | |
| AATATGGAATCACCCCTGCT+TGG | - | chr2_3:35586367-35586386 | None:intergenic | 45.0% | |
| TTCAGTAAAGTGGCCAGTGA+TGG | + | chr2_3:35586471-35586490 | Msa0289390:intron | 45.0% | |
| GAGATCCATTGTTCCATCAC+TGG | - | chr2_3:35586487-35586506 | None:intergenic | 45.0% | |
| !! | ATGGGAAAAGGAGGCATTCA+AGG | + | chr2_3:35586633-35586652 | Msa0289390:three_prime_UTR | 45.0% |
| TACAAGCAGAAGCTGATCCT+AGG | - | chr2_3:35586761-35586780 | None:intergenic | 45.0% | |
| !! | CACAAGACTTGGTGACTGTT+TGG | + | chr2_3:35586850-35586869 | Msa0289390:three_prime_UTR | 45.0% |
| !!! | ATTTAATAATTCTAAAATAT+TGG | + | chr2_3:35584127-35584146 | Msa0289390:intron | 5.0% |
| ! | TCGATTTGTCGTGTCGGACT+CGG | - | chr2_3:35581087-35581106 | None:intergenic | 50.0% |
| GAATGAGGAAGGAGGAGTAG+AGG | - | chr2_3:35581174-35581193 | None:intergenic | 50.0% | |
| ACTTCGCTTCCCGTGAAATC+TGG | + | chr2_3:35581243-35581262 | Msa0289390:five_prime_UTR | 50.0% | |
| CTTCCCGTGAAATCTGGCTA+TGG | + | chr2_3:35581249-35581268 | Msa0289390:exon | 50.0% | |
| CTGACCGCTTCTGGTGATAT+CGG | + | chr2_3:35582083-35582102 | Msa0289390:intron | 50.0% | |
| GAGTCCGATATCACCAGAAG+CGG | - | chr2_3:35582090-35582109 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr2_3:35582548-35582567 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr2_3:35582545-35582564 | Msa0289390:intron | 50.0% | |
| CTTAGTGGGATAAGGCTTGG+TGG | + | chr2_3:35582548-35582567 | Msa0289390:intron | 50.0% | |
| TAGGTTCGATGTCATACCCC+AGG | + | chr2_3:35582735-35582754 | Msa0289390:CDS | 50.0% | |
| TATACGCGTCCTGCTCAAGT+TGG | - | chr2_3:35582796-35582815 | None:intergenic | 50.0% | |
| TTAAGGGAGTGGAGACAGAC+AGG | + | chr2_3:35583170-35583189 | Msa0289390:intron | 50.0% | |
| TGTCCAGAACTCAGCACACT+GGG | - | chr2_3:35583206-35583225 | None:intergenic | 50.0% | |
| ATGTCCAGAACTCAGCACAC+TGG | - | chr2_3:35583207-35583226 | None:intergenic | 50.0% | |
| GAAGCAGAGACTGTTGGACT+TGG | - | chr2_3:35583248-35583267 | None:intergenic | 50.0% | |
| GGCCCACCATAAGATTGTGA+TGG | - | chr2_3:35583302-35583321 | None:intergenic | 50.0% | |
| ACAGAAGAAGATGGCTGGTG+GGG | - | chr2_3:35583359-35583378 | None:intergenic | 50.0% | |
| CAACAGAAGAAGATGGCTGG+TGG | - | chr2_3:35583361-35583380 | None:intergenic | 50.0% | |
| CACCAGCCATCTTCTTCTGT+TGG | + | chr2_3:35583359-35583378 | Msa0289390:CDS | 50.0% | |
| TGGACCTGTTCCAGGAACTA+AGG | + | chr2_3:35583388-35583407 | Msa0289390:CDS | 50.0% | |
| GGACCTGTTCCAGGAACTAA+GGG | + | chr2_3:35583389-35583408 | Msa0289390:CDS | 50.0% | |
| TTGCCCTTAGTTCCTGGAAC+AGG | - | chr2_3:35583395-35583414 | None:intergenic | 50.0% | |
| TGCTTCTTGCCCTTAGTTCC+TGG | - | chr2_3:35583401-35583420 | None:intergenic | 50.0% | |
| ATGCAGGGCCAAGTATTACC+AGG | + | chr2_3:35583583-35583602 | Msa0289390:intron | 50.0% | |
| AATACCCTTCTTCGGGACCA+GGG | + | chr2_3:35583623-35583642 | Msa0289390:CDS | 50.0% | |
| CGTACTTTCTTGCCAACGAG+TGG | - | chr2_3:35583724-35583743 | None:intergenic | 50.0% | |
| ! | GTTAGCCTGTGGTGCATACA+AGG | + | chr2_3:35584543-35584562 | Msa0289390:intron | 50.0% |
| AGACCTTTGGGCATTAGGAG+AGG | + | chr2_3:35584602-35584621 | Msa0289390:intron | 50.0% | |
| !! | CCTGGAGCATTTTACCCAGT+AGG | - | chr2_3:35584738-35584757 | None:intergenic | 50.0% |
| CCTACTGGGTAAAATGCTCC+AGG | + | chr2_3:35584735-35584754 | Msa0289390:intron | 50.0% | |
| CTCCAGGGCCCAAAAAAATG+TGG | + | chr2_3:35584751-35584770 | Msa0289390:intron | 50.0% | |
| GGCCCAAAAAAATGTGGGCT+GGG | + | chr2_3:35584757-35584776 | Msa0289390:intron | 50.0% | |
| !! | AATGTGGGCTGGGATGTGTT+TGG | + | chr2_3:35584767-35584786 | Msa0289390:intron | 50.0% |
| TTACATGGAACCAGCAGCTG+CGG | - | chr2_3:35585152-35585171 | None:intergenic | 50.0% | |
| CTTGTAACCGCAGATCTCTC+CGG | + | chr2_3:35585370-35585389 | Msa0289390:intron | 50.0% | |
| !!! | AACCATCGTTTTGGGGGATC+TGG | + | chr2_3:35585428-35585447 | Msa0289390:CDS | 50.0% |
| GATCTGGTCGTGGGATGAAT+AGG | + | chr2_3:35585444-35585463 | Msa0289390:CDS | 50.0% | |
| CGTGGGATGAATAGGTCTGT+AGG | + | chr2_3:35585452-35585471 | Msa0289390:CDS | 50.0% | |
| ! | GTAGGTCGTGATAGTGTTCC+AGG | + | chr2_3:35585470-35585489 | Msa0289390:CDS | 50.0% |
| ! | AAGAGGTAGGGGAGGTACAA+AGG | + | chr2_3:35585499-35585518 | Msa0289390:CDS | 50.0% |
| ! | AGAGGTAGGGGAGGTACAAA+GGG | + | chr2_3:35585500-35585519 | Msa0289390:CDS | 50.0% |
| ! | GGGTAACTTGTCAGGTGGAA+AGG | + | chr2_3:35585697-35585716 | Msa0289390:intron | 50.0% |
| ! | AGTGGCCAGTGATGGAACAA+TGG | + | chr2_3:35586479-35586498 | Msa0289390:intron | 50.0% |
| ! | CTCTTGCTGCTTGAGGTGCT+TGG | - | chr2_3:35582060-35582079 | None:intergenic | 55.0% |
| CAAGCACCTCAAGCAGCAAG+AGG | + | chr2_3:35582058-35582077 | Msa0289390:intron | 55.0% | |
| ! | TCAGCACCTCTTGCTGCTTG+AGG | - | chr2_3:35582067-35582086 | None:intergenic | 55.0% |
| ACTAAGTGGGGCAGCCTACA+TGG | - | chr2_3:35582534-35582553 | None:intergenic | 55.0% | |
| ATGTAGGCTGCCCCACTTAG+TGG | + | chr2_3:35582533-35582552 | Msa0289390:intron | 55.0% | |
| TGTAGGCTGCCCCACTTAGT+GGG | + | chr2_3:35582534-35582553 | Msa0289390:intron | 55.0% | |
| CTGCCCCACTTAGTGGGATA+AGG | + | chr2_3:35582540-35582559 | Msa0289390:intron | 55.0% | |
| AACTCAGCACACTGGGCTGA+TGG | - | chr2_3:35583199-35583218 | None:intergenic | 55.0% | |
| !! | ACGGGCTGGGGATGAAATGA+AGG | - | chr2_3:35583329-35583348 | None:intergenic | 55.0% |
| TTCATTTCATCCCCAGCCCG+TGG | + | chr2_3:35583328-35583347 | Msa0289390:CDS | 55.0% | |
| GGAAAACGTGGACCTGTTCC+AGG | + | chr2_3:35583380-35583399 | Msa0289390:CDS | 55.0% | |
| CAATACCCTTCTTCGGGACC+AGG | + | chr2_3:35583622-35583641 | Msa0289390:CDS | 55.0% | |
| ATACCCTTCTTCGGGACCAG+GGG | + | chr2_3:35583624-35583643 | Msa0289390:CDS | 55.0% | |
| GGTACTTGATTCCTTCCCCC+TGG | - | chr2_3:35583643-35583662 | None:intergenic | 55.0% | |
| !! | GTTACTTCGGGTACTGGCAC+AGG | + | chr2_3:35583670-35583689 | Msa0289390:CDS | 55.0% |
| GCACCTCTCCTAATGCCCAA+AGG | - | chr2_3:35584608-35584627 | None:intergenic | 55.0% | |
| !!! | GCCCACATTTTTTTGGGCCC+TGG | - | chr2_3:35584756-35584775 | None:intergenic | 55.0% |
| GGGCCCAAAAAAATGTGGGC+TGG | + | chr2_3:35584756-35584775 | Msa0289390:intron | 55.0% | |
| GACCAGATCCCCCAAAACGA+TGG | - | chr2_3:35585433-35585452 | None:intergenic | 55.0% | |
| !!! | GTTTTGGGGGATCTGGTCGT+GGG | + | chr2_3:35585435-35585454 | Msa0289390:CDS | 55.0% |
| ! | GAGGTAGGGGAGGTACAAAG+GGG | + | chr2_3:35585501-35585520 | Msa0289390:CDS | 55.0% |
| CTTCCATGCCGTGGAAACAG+TGG | + | chr2_3:35586289-35586308 | Msa0289390:intron | 55.0% | |
| !! | CAAGAGGTGCTGACCGCTTC+TGG | + | chr2_3:35582074-35582093 | Msa0289390:intron | 60.0% |
| ! | CTAGAGGGGCACGTCTTGCT+GGG | + | chr2_3:35582696-35582715 | Msa0289390:CDS | 60.0% |
| GGGCACGTCTTGCTGGGAAT+GGG | + | chr2_3:35582702-35582721 | Msa0289390:CDS | 60.0% | |
| GGGAATGGGCGATCTGCAGT+AGG | + | chr2_3:35582716-35582735 | Msa0289390:CDS | 60.0% | |
| AGGGAGTGGAGACAGACAGG+AGG | + | chr2_3:35583173-35583192 | Msa0289390:intron | 60.0% | |
| CAGCCCAGTGTGCTGAGTTC+TGG | + | chr2_3:35583200-35583219 | Msa0289390:CDS | 60.0% | |
| TACCCTTCTTCGGGACCAGG+GGG | + | chr2_3:35583625-35583644 | Msa0289390:CDS | 60.0% | |
| TTCCCCCTGGTCCCGAAGAA+GGG | - | chr2_3:35583630-35583649 | None:intergenic | 60.0% | |
| !! | TGGCACAGGTGAGCTTGCTG+AGG | + | chr2_3:35583684-35583703 | Msa0289390:CDS | 60.0% |
| !! | GGCACAGGTGAGCTTGCTGA+GGG | + | chr2_3:35583685-35583704 | Msa0289390:CDS | 60.0% |
| CAGTTGAAGACCGCAGCTGC+TGG | + | chr2_3:35585139-35585158 | Msa0289390:intron | 60.0% | |
| CAATGGGTAGGGGAGGAACC+TGG | + | chr2_3:35585401-35585420 | Msa0289390:CDS | 60.0% | |
| !!! | CGTTTTGGGGGATCTGGTCG+TGG | + | chr2_3:35585434-35585453 | Msa0289390:CDS | 60.0% |
| ! | CGTGATAGTGTTCCAGGCGC+TGG | + | chr2_3:35585476-35585495 | Msa0289390:CDS | 60.0% |
| !! | AGTGTTCCAGGCGCTGGAAG+AGG | + | chr2_3:35585482-35585501 | Msa0289390:CDS | 60.0% |
| !! | TTCCAGGCGCTGGAAGAGGT+AGG | + | chr2_3:35585486-35585505 | Msa0289390:CDS | 60.0% |
| !! | TCCAGGCGCTGGAAGAGGTA+GGG | + | chr2_3:35585487-35585506 | Msa0289390:CDS | 60.0% |
| TGGCCACTGTTTCCACGGCA+TGG | - | chr2_3:35586295-35586314 | None:intergenic | 60.0% | |
| CCAGCAAGACGTGCCCCTCT+AGG | - | chr2_3:35582698-35582717 | None:intergenic | 65.0% | |
| ! | CCTAGAGGGGCACGTCTTGC+TGG | + | chr2_3:35582695-35582714 | Msa0289390:CDS | 65.0% |
| GGGGCACGTCTTGCTGGGAA+TGG | + | chr2_3:35582701-35582720 | Msa0289390:CDS | 65.0% | |
| CTTCCCCCTGGTCCCGAAGA+AGG | - | chr2_3:35583631-35583650 | None:intergenic | 65.0% | |
| CTTCTTCGGGACCAGGGGGA+AGG | + | chr2_3:35583629-35583648 | Msa0289390:CDS | 65.0% | |
| !! | CCAGGCGCTGGAAGAGGTAG+GGG | + | chr2_3:35585488-35585507 | Msa0289390:CDS | 65.0% |
| TGGCTGGTGGGGTGCAGCCA+CGG | - | chr2_3:35583348-35583367 | None:intergenic | 70.0% | |
| CCCCTACCTCTTCCAGCGCC+TGG | - | chr2_3:35585491-35585510 | None:intergenic | 70.0% | |
| ! | GGCGCTGGAAGAGGTAGGGG+AGG | + | chr2_3:35585491-35585510 | Msa0289390:CDS | 70.0% |
| ! | TGGGGTGCAGCCACGGGCTG+GGG | - | chr2_3:35583341-35583360 | None:intergenic | 75.0% |
| GTGGGGTGCAGCCACGGGCT+GGG | - | chr2_3:35583342-35583361 | None:intergenic | 75.0% | |
| GGCTGGTGGGGTGCAGCCAC+GGG | - | chr2_3:35583347-35583366 | None:intergenic | 75.0% | |
| ! | GGTGGGGTGCAGCCACGGGC+TGG | - | chr2_3:35583343-35583362 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 35581002 | 35586911 | 35581002 | ID=Msa0289390;Name=Msa0289390 |
| chr2_3 | mRNA | 35581002 | 35586911 | 35581002 | ID=Msa0289390-mRNA-1;Parent=Msa0289390;Name=Msa0289390-mRNA-1;_AED=0.06;_eAED=0.06;_QI=266|1|1|1|0.88|0.9|10|299|435 |
| chr2_3 | exon | 35581002 | 35581295 | 35581002 | ID=Msa0289390-mRNA-1:exon:11492;Parent=Msa0289390-mRNA-1 |
| chr2_3 | exon | 35582654 | 35582862 | 35582654 | ID=Msa0289390-mRNA-1:exon:11493;Parent=Msa0289390-mRNA-1 |
| chr2_3 | exon | 35582952 | 35583061 | 35582952 | ID=Msa0289390-mRNA-1:exon:11494;Parent=Msa0289390-mRNA-1 |
| chr2_3 | exon | 35583175 | 35583427 | 35583175 | ID=Msa0289390-mRNA-1:exon:11495;Parent=Msa0289390-mRNA-1 |
| chr2_3 | exon | 35583589 | 35583807 | 35583589 | ID=Msa0289390-mRNA-1:exon:11496;Parent=Msa0289390-mRNA-1 |
| chr2_3 | exon | 35583894 | 35583962 | 35583894 | ID=Msa0289390-mRNA-1:exon:11497;Parent=Msa0289390-mRNA-1 |
| chr2_3 | exon | 35585383 | 35585619 | 35585383 | ID=Msa0289390-mRNA-1:exon:11498;Parent=Msa0289390-mRNA-1 |
| chr2_3 | exon | 35585711 | 35585779 | 35585711 | ID=Msa0289390-mRNA-1:exon:11499;Parent=Msa0289390-mRNA-1 |
| chr2_3 | exon | 35585892 | 35585955 | 35585892 | ID=Msa0289390-mRNA-1:exon:11500;Parent=Msa0289390-mRNA-1 |
| chr2_3 | exon | 35586563 | 35586911 | 35586563 | ID=Msa0289390-mRNA-1:exon:11501;Parent=Msa0289390-mRNA-1 |
| chr2_3 | five_prime_UTR | 35581002 | 35581267 | 35581002 | ID=Msa0289390-mRNA-1:five_prime_utr;Parent=Msa0289390-mRNA-1 |
| chr2_3 | CDS | 35581268 | 35581295 | 35581268 | ID=Msa0289390-mRNA-1:cds;Parent=Msa0289390-mRNA-1 |
| chr2_3 | CDS | 35582654 | 35582862 | 35582654 | ID=Msa0289390-mRNA-1:cds;Parent=Msa0289390-mRNA-1 |
| chr2_3 | CDS | 35582952 | 35583061 | 35582952 | ID=Msa0289390-mRNA-1:cds;Parent=Msa0289390-mRNA-1 |
| chr2_3 | CDS | 35583175 | 35583427 | 35583175 | ID=Msa0289390-mRNA-1:cds;Parent=Msa0289390-mRNA-1 |
| chr2_3 | CDS | 35583589 | 35583807 | 35583589 | ID=Msa0289390-mRNA-1:cds;Parent=Msa0289390-mRNA-1 |
| chr2_3 | CDS | 35583894 | 35583962 | 35583894 | ID=Msa0289390-mRNA-1:cds;Parent=Msa0289390-mRNA-1 |
| chr2_3 | CDS | 35585383 | 35585619 | 35585383 | ID=Msa0289390-mRNA-1:cds;Parent=Msa0289390-mRNA-1 |
| chr2_3 | CDS | 35585711 | 35585779 | 35585711 | ID=Msa0289390-mRNA-1:cds;Parent=Msa0289390-mRNA-1 |
| chr2_3 | CDS | 35585892 | 35585955 | 35585892 | ID=Msa0289390-mRNA-1:cds;Parent=Msa0289390-mRNA-1 |
| chr2_3 | CDS | 35586563 | 35586612 | 35586563 | ID=Msa0289390-mRNA-1:cds;Parent=Msa0289390-mRNA-1 |
| chr2_3 | three_prime_UTR | 35586613 | 35586911 | 35586613 | ID=Msa0289390-mRNA-1:three_prime_utr;Parent=Msa0289390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
