AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0210260


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0210260 MtrunA17_Chr2g0308511 98.851 435 2 1 1 432 1 435 0.0 869
Msa0210260 MtrunA17_Chr1g0175141 52.308 390 124 9 51 431 1 337 1.70e-122 360
Msa0210260 MtrunA17_Chr4g0010421 84.884 172 23 1 1 169 1 172 4.54e-103 303
Msa0210260 MtrunA17_Chr4g0010411 74.146 205 48 4 232 432 2 205 6.52e-87 263
Msa0210260 MtrunA17_Chr4g0056121 80.435 46 9 0 60 105 20 65 5.39e-17 77.8
Msa0210260 MtrunA17_Chr4g0056121 54.795 73 30 2 198 268 66 137 1.07e-14 71.2
Msa0210260 MtrunA17_Chr7g0254081 53.333 60 28 0 58 117 1 60 1.33e-14 75.5
Msa0210260 MtrunA17_Chr4g0056131 46.377 69 24 1 347 415 1 56 2.35e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0210260 AT5G13020.1 55.476 420 157 9 1 416 1 394 4.74e-141 409
Msa0210260 AT2G44440.1 55.243 391 158 9 41 421 45 428 7.49e-141 409
Msa0210260 AT5G13020.3 56.610 295 105 6 1 294 1 273 1.26e-97 294
Msa0210260 AT5G13020.2 56.401 289 103 6 1 288 1 267 9.11e-94 286
Msa0210260 AT3G12140.2 47.606 376 127 9 51 418 1 314 1.02e-88 273
Msa0210260 AT3G12140.1 47.606 376 127 9 51 418 1 314 1.02e-88 273
Msa0210260 AT5G06780.1 43.085 376 134 8 49 418 6 307 6.21e-87 268
Msa0210260 AT3G12140.3 47.453 373 126 9 51 415 1 311 6.58e-87 270
Msa0210260 AT5G06780.2 43.048 374 133 8 51 418 1 300 4.27e-86 265

Find 168 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAACACCTACGTTGTAAAA+TGG 0.171586 2_1:-50400385 Msa0210260:three_prime_UTR
GGCATCAGCTTGAGCTTTAA+AGG 0.189479 2_1:+50404123 None:intergenic
TGCTTCTTGCCCTTAGTTCC+TGG 0.200809 2_1:+50403556 None:intergenic
AGGATGACAATTATGTAATT+TGG 0.222474 2_1:-50400294 Msa0210260:three_prime_UTR
ACCCATGATGATTAAGATTT+GGG 0.247179 2_1:+50400115 None:intergenic
GTGGGGTGCAGCCACGGGCT+GGG 0.250938 2_1:+50403615 None:intergenic
CACCAAGTCTTGTGAATAAA+TGG 0.261589 2_1:+50400158 None:intergenic
GGTGGGGTGCAGCCACGGGC+TGG 0.267425 2_1:+50403614 None:intergenic
CAGCCCAGTGTGCTGAGTTC+TGG 0.291340 2_1:-50403754 Msa0210260:CDS
CCTAGAGGGGCACGTCTTGC+TGG 0.293075 2_1:-50404259 Msa0210260:CDS
TACCCATGATGATTAAGATT+TGG 0.296054 2_1:+50400114 None:intergenic
ATGAACGAATCGAAGATCTT+AGG 0.308453 2_1:+50405836 None:intergenic
CCTGGAATCAACCATCGTTT+TGG 0.329010 2_1:-50401546 Msa0210260:CDS
AATAAAGCAATACCCTTCTT+CGG 0.340861 2_1:-50403339 Msa0210260:CDS
TGGGGTGCAGCCACGGGCTG+GGG 0.347249 2_1:+50403616 None:intergenic
CTCAAGCTGATGCCATTACT+TGG 0.350686 2_1:-50404114 Msa0210260:CDS
GTAGGTCGTGATAGTGTTCC+AGG 0.351196 2_1:-50401495 Msa0210260:CDS
GGACTCGGAAACTGAGTTAT+TGG 0.357216 2_1:+50405896 None:intergenic
GATCTTTCTGATGGCGATAA+TGG 0.357677 2_1:-50401031 Msa0210260:intron
CACAAGACTTGGTGACTGTT+TGG 0.364338 2_1:-50400149 Msa0210260:three_prime_UTR
TGGCTGGTGGGGTGCAGCCA+CGG 0.365263 2_1:+50403609 None:intergenic
GAGGAACATAGGGAACTTCT+AGG 0.365417 2_1:-50403951 Msa0210260:CDS
GTCAATTTCACCGTACATCC+TGG 0.372915 2_1:+50404201 None:intergenic
GGGGCACGTCTTGCTGGGAA+TGG 0.373208 2_1:-50404253 Msa0210260:CDS
GTACCCGAAGTAACTCTATT+AGG 0.380380 2_1:+50403293 None:intergenic
TTGCCCTTAGTTCCTGGAAC+AGG 0.381177 2_1:+50403562 None:intergenic
TTCTCAATTTCATGTACATC+AGG 0.383976 2_1:+50401227 None:intergenic
GGCTGGTGGGGTGCAGCCAC+GGG 0.385323 2_1:+50403610 None:intergenic
CCAAAACGATGGTTGATTCC+AGG 0.388750 2_1:+50401546 None:intergenic
TGCTTTATTGAAGGTGCTCC+TGG 0.391044 2_1:+50403353 None:intergenic
TTGATTTAACATGTGAGAAA+TGG 0.395327 2_1:+50400423 None:intergenic
ATAAAGCAATACCCTTCTTC+GGG 0.395622 2_1:-50403338 Msa0210260:CDS
GAACACCTACGTTGTAAAAT+GGG 0.410249 2_1:-50400384 Msa0210260:three_prime_UTR
TCGATTTGTCGTGTCGGACT+CGG 0.413204 2_1:+50405881 None:intergenic
TTTCTCACATGTTAAATCAA+TGG 0.415277 2_1:-50400420 Msa0210260:CDS
GGAAAACGTGGACCTGTTCC+AGG 0.422832 2_1:-50403574 Msa0210260:CDS
ACTTCGCTTCCCGTGAAATC+TGG 0.422993 2_1:-50405722 Msa0210260:five_prime_UTR
TGGTAATAATTATTTATTGA+GGG 0.429672 2_1:-50400274 Msa0210260:three_prime_UTR
GGGAAGTGTAAATGAATCAT+TGG 0.431698 2_1:-50403034 Msa0210260:CDS
ACCCCAAATCTTAATCATCA+TGG 0.431728 2_1:-50400117 Msa0210260:three_prime_UTR
TCTCTTGTATTCTATCAGAT+AGG 0.434573 2_1:-50400314 Msa0210260:three_prime_UTR
CCCCTACCTCTTCCAGCGCC+TGG 0.437181 2_1:+50401477 None:intergenic
GATCTGGTCGTGGGATGAAT+AGG 0.438428 2_1:-50401521 Msa0210260:CDS
TCATAGAAGTTATTGTCATC+AGG 0.439972 2_1:+50403200 None:intergenic
ATGGGAAAAGGAGGCATTCA+AGG 0.441036 2_1:-50400366 Msa0210260:three_prime_UTR
TAATTTAATACAGCAAATAT+AGG 0.442764 2_1:+50400191 None:intergenic
GGGCACGTCTTGCTGGGAAT+GGG 0.448749 2_1:-50404252 Msa0210260:CDS
AGAGGTAGGGGAGGTACAAA+GGG 0.450148 2_1:-50401465 Msa0210260:CDS
TTGCCATCACAGAATGGAAT+CGG 0.451792 2_1:-50401423 Msa0210260:CDS
TTCAATATTATTTCTAGGGA+GGG 0.453417 2_1:+50405951 None:intergenic
CGTGATAGTGTTCCAGGCGC+TGG 0.455267 2_1:-50401489 Msa0210260:CDS
GAATGAGGAAGGAGGAGTAG+AGG 0.456632 2_1:+50405794 None:intergenic
CACCAGCCATCTTCTTCTGT+TGG 0.456682 2_1:-50403595 Msa0210260:CDS
CAATACCCTTCTTCGGGACC+AGG 0.459640 2_1:-50403332 Msa0210260:CDS
CGGAAGATATTCAATGGGTA+GGG 0.460464 2_1:-50401575 Msa0210260:CDS
CACCATTTATTCACAAGACT+TGG 0.462492 2_1:-50400160 Msa0210260:three_prime_UTR
GATTATCAAATGAGGAACAT+AGG 0.464821 2_1:-50403962 Msa0210260:CDS
GAAGGGTATTGCTTTATTGA+AGG 0.465077 2_1:+50403344 None:intergenic
TGTAAATGAATCATTGGAAT+GGG 0.466303 2_1:-50403028 Msa0210260:CDS
ATTATCAAATGAGGAACATA+GGG 0.470814 2_1:-50403961 Msa0210260:CDS
GGGTAACTTGTCAGGTGGAA+AGG 0.475104 2_1:-50401268 Msa0210260:intron
TTGGTAATAATTATTTATTG+AGG 0.477000 2_1:-50400275 Msa0210260:three_prime_UTR
CACAGACACACTAGTTAAAG+AGG 0.478328 2_1:-50401367 Msa0210260:intron
TCTCTCCGGAAGATATTCAA+TGG 0.483434 2_1:-50401581 Msa0210260:CDS
GAGTAGAGGAACAATGATTG+AGG 0.486194 2_1:+50405808 None:intergenic
TCCGTACCATCACAATCTTA+TGG 0.486303 2_1:-50403661 Msa0210260:CDS
TGGACCTGTTCCAGGAACTA+AGG 0.487227 2_1:-50403566 Msa0210260:CDS
GTGTAAATGAATCATTGGAA+TGG 0.491091 2_1:-50403029 Msa0210260:CDS
TTAAGGGAGTGGAGACAGAC+AGG 0.491451 2_1:-50403784 Msa0210260:intron
GAAAGCCAAGAAAATATTGA+AGG 0.498578 2_1:-50401207 Msa0210260:intron
CCAGGCGCTGGAAGAGGTAG+GGG 0.498970 2_1:-50401477 Msa0210260:CDS
GTACCTAATAGAGTTACTTC+GGG 0.499309 2_1:-50403296 Msa0210260:CDS
CCTACCCATTGAATATCTTC+CGG 0.502345 2_1:+50401576 None:intergenic
AGTACCTAATAGAGTTACTT+CGG 0.502873 2_1:-50403297 Msa0210260:CDS
CTAGAGGGGCACGTCTTGCT+GGG 0.503115 2_1:-50404258 Msa0210260:CDS
GGTAACTTGTCAGGTGGAAA+GGG 0.504129 2_1:-50401267 Msa0210260:intron
GTGGATGTAAGTACATCTAC+TGG 0.505198 2_1:+50403155 None:intergenic
GAAGCAGAGACTGTTGGACT+TGG 0.505403 2_1:+50403709 None:intergenic
AATAGAGTTACTTCGGGTAC+TGG 0.508423 2_1:-50403290 Msa0210260:CDS
TTACGAGAAGCAGAGACTGT+TGG 0.510483 2_1:+50403703 None:intergenic
AGTGTTCCAGGCGCTGGAAG+AGG 0.511098 2_1:-50401483 Msa0210260:CDS
AACTCAGCACACTGGGCTGA+TGG 0.513722 2_1:+50403758 None:intergenic
TCAATTTCACCGTACATCCT+GGG 0.514345 2_1:+50404202 None:intergenic
CCAGCAAGACGTGCCCCTCT+AGG 0.514854 2_1:+50404259 None:intergenic
CTACGTTGTAAAATGGGAAA+AGG 0.518139 2_1:-50400378 Msa0210260:three_prime_UTR
TTTCCGATTCCATTCTGTGA+TGG 0.519534 2_1:+50401420 None:intergenic
CAATGGGTAGGGGAGGAACC+TGG 0.520661 2_1:-50401564 Msa0210260:CDS
AAGAAAATGTACCCAAGTAA+TGG 0.521418 2_1:+50404102 None:intergenic
CTTCCCGTGAAATCTGGCTA+TGG 0.521624 2_1:-50405716 Msa0210260:exon
AGCGAAAGTGAAAGAGAATG+AGG 0.522621 2_1:+50405779 None:intergenic
CGTACTTTCTTGCCAACGAG+TGG 0.524221 2_1:+50403233 None:intergenic
GATTTATTGCCATCACAGAA+TGG 0.526792 2_1:-50401429 Msa0210260:CDS
TGCTTCTCGTAAGAAGCAAA+AGG 0.528673 2_1:-50403692 Msa0210260:CDS
GTTACTTCGGGTACTGGCAC+AGG 0.529579 2_1:-50403284 Msa0210260:CDS
CTCTCCGGAAGATATTCAAT+GGG 0.530818 2_1:-50401580 Msa0210260:CDS
TTCCAACAGAAGAAGATGGC+TGG 0.531524 2_1:+50403593 None:intergenic
TGTCCAGAACTCAGCACACT+GGG 0.531670 2_1:+50403751 None:intergenic
CCCCAAATCTTAATCATCAT+GGG 0.536554 2_1:-50400116 Msa0210260:three_prime_UTR
CACAATCTGGTCTATGACAT+GGG 0.537543 2_1:-50403054 Msa0210260:CDS
AAGGTGCTCCTGGTAATACT+TGG 0.538548 2_1:+50403363 None:intergenic
CTTGTAACCGCAGATCTCTC+CGG 0.540537 2_1:-50401595 Msa0210260:intron
ATGTCATACCCCAGGATGTA+CGG 0.542230 2_1:-50404211 Msa0210260:CDS
TTTCAATATTATTTCTAGGG+AGG 0.543126 2_1:+50405950 None:intergenic
TCAAATTCACCAACTTGAGC+AGG 0.543941 2_1:-50404170 Msa0210260:CDS
AAGAGGTAGGGGAGGTACAA+AGG 0.547461 2_1:-50401466 Msa0210260:CDS
TAATCCATAGCCAGATTTCA+CGG 0.548341 2_1:+50405712 None:intergenic
ACCATAAGATTGTGATGGTA+CGG 0.550660 2_1:+50403660 None:intergenic
ACGGGCTGGGGATGAAATGA+AGG 0.550737 2_1:+50403628 None:intergenic
CCGGAAGATATTCAATGGGT+AGG 0.552057 2_1:-50401576 Msa0210260:CDS
ATCAAAATAGAATTCCTAGA+GGG 0.552953 2_1:-50404273 Msa0210260:CDS
TACAAGCAGAAGCTGATCCT+AGG 0.553253 2_1:+50400241 None:intergenic
AAAGTGAAAGAGAATGAGGA+AGG 0.556604 2_1:+50405783 None:intergenic
TTCATTTCATCCCCAGCCCG+TGG 0.558407 2_1:-50403626 Msa0210260:CDS
ACAGAAGAAGATGGCTGGTG+GGG 0.563016 2_1:+50403598 None:intergenic
AATCCATAGCCAGATTTCAC+GGG 0.564228 2_1:+50405713 None:intergenic
CCCATGATGATTAAGATTTG+GGG 0.565451 2_1:+50400116 None:intergenic
TCCAGGCGCTGGAAGAGGTA+GGG 0.566490 2_1:-50401478 Msa0210260:CDS
GTGAAAGAGAATGAGGAAGG+AGG 0.567437 2_1:+50405786 None:intergenic
TCTTCTTCTGTTGGAAAACG+TGG 0.568821 2_1:-50403586 Msa0210260:CDS
ATGTCCAGAACTCAGCACAC+TGG 0.569046 2_1:+50403750 None:intergenic
TTCAAGGAAGCAAAAGTCAC+GGG 0.571010 2_1:-50400350 Msa0210260:three_prime_UTR
GAGGTAGGGGAGGTACAAAG+GGG 0.571827 2_1:-50401464 Msa0210260:CDS
AGGCTTGCAGATCTTTCTGA+TGG 0.572035 2_1:-50401040 Msa0210260:CDS
CGTGGGATGAATAGGTCTGT+AGG 0.575629 2_1:-50401513 Msa0210260:CDS
AACAGAAGAAGATGGCTGGT+GGG 0.578561 2_1:+50403597 None:intergenic
ATGATGTCATACGAAGGATA+AGG 0.581095 2_1:-50403914 Msa0210260:intron
AGAACTAAGATTATCAAATG+AGG 0.581607 2_1:-50403970 Msa0210260:CDS
TGAGTTTCGATTTGTCGTGT+CGG 0.583372 2_1:+50405875 None:intergenic
TAGGTTCGATGTCATACCCC+AGG 0.585808 2_1:-50404219 Msa0210260:CDS
CTCTTATCGATGCAATTGCA+AGG 0.587215 2_1:-50401060 Msa0210260:CDS
TGGGGATGAAATGAAGGAGA+AGG 0.587707 2_1:+50403634 None:intergenic
ATGCAGGGCCAAGTATTACC+AGG 0.589351 2_1:-50403371 Msa0210260:intron
CAACAGAAGAAGATGGCTGG+TGG 0.590040 2_1:+50403596 None:intergenic
AATACCCTTCTTCGGGACCA+GGG 0.590984 2_1:-50403331 Msa0210260:CDS
GCATCAATTGATCCACTCGT+TGG 0.592131 2_1:-50403245 Msa0210260:CDS
GGCACAGGTGAGCTTGCTGA+GGG 0.592343 2_1:-50403269 Msa0210260:CDS
TACCATCACAATCTTATGGT+GGG 0.594162 2_1:-50403657 Msa0210260:CDS
TGGCACAGGTGAGCTTGCTG+AGG 0.594365 2_1:-50403270 Msa0210260:CDS
AGCTTACCACTACTATCGTA+AGG 0.596626 2_1:+50405685 None:intergenic
GCACAATCTGGTCTATGACA+TGG 0.596902 2_1:-50403055 Msa0210260:CDS
GGGAATGGGCGATCTGCAGT+AGG 0.597765 2_1:-50404238 Msa0210260:CDS
TACATCTACTGGATTGTAGT+CGG 0.599461 2_1:+50403166 None:intergenic
GCAAGAAAGTACGAACAAGA+TGG 0.604041 2_1:-50403223 Msa0210260:CDS
TATACGCGTCCTGCTCAAGT+TGG 0.614385 2_1:+50404161 None:intergenic
ATTCAAGGAAGCAAAAGTCA+CGG 0.617397 2_1:-50400351 Msa0210260:three_prime_UTR
TCAAGCTGATGCCATTACTT+GGG 0.618960 2_1:-50404113 Msa0210260:intron
CGTTGTAAAATGGGAAAAGG+AGG 0.620575 2_1:-50400375 Msa0210260:three_prime_UTR
TTGAGGGTAAGATTTGACCT+AGG 0.621339 2_1:-50400258 Msa0210260:three_prime_UTR
TTCCAGGCGCTGGAAGAGGT+AGG 0.621453 2_1:-50401479 Msa0210260:CDS
AGATATTCAATGGGTAGGGG+AGG 0.622945 2_1:-50401571 Msa0210260:CDS
AAGCGAAGTACAGAGATCGA+AGG 0.629562 2_1:+50405736 None:intergenic
GGAAGATATTCAATGGGTAG+GGG 0.632331 2_1:-50401574 Msa0210260:CDS
ATACCCTTCTTCGGGACCAG+GGG 0.638170 2_1:-50403330 Msa0210260:CDS
GGACCTGTTCCAGGAACTAA+GGG 0.641860 2_1:-50403565 Msa0210260:CDS
CAATTTCACCGTACATCCTG+GGG 0.645515 2_1:+50404203 None:intergenic
GGCGCTGGAAGAGGTAGGGG+AGG 0.649489 2_1:-50401474 Msa0210260:CDS
GGCCCACCATAAGATTGTGA+TGG 0.650903 2_1:+50403655 None:intergenic
TAAGATTGTGATGGTACGGA+CGG 0.655045 2_1:+50403664 None:intergenic
TACCCTTCTTCGGGACCAGG+GGG 0.660578 2_1:-50403329 Msa0210260:CDS
TACGAACCTTACGATAGTAG+TGG 0.662698 2_1:-50405691 Msa0210260:intron
TGACATCATCTGCATTAACA+CGG 0.665820 2_1:+50403928 None:intergenic
GGAATGGGTTAATCTGTCAG+AGG 0.668396 2_1:-50403013 Msa0210260:intron
GTACCATCACAATCTTATGG+TGG 0.670093 2_1:-50403658 Msa0210260:CDS
TCAAAATAGAATTCCTAGAG+GGG 0.671510 2_1:-50404272 Msa0210260:CDS
CATCAAAATAGAATTCCTAG+AGG 0.671706 2_1:-50404274 Msa0210260:CDS
GATGTACGGTGAAATTGACA+TGG 0.674935 2_1:-50404197 Msa0210260:CDS
AGGGAGTGGAGACAGACAGG+AGG 0.700855 2_1:-50403781 Msa0210260:intron
ATGCAGATGATGTCATACGA+AGG 0.702583 2_1:-50403920 Msa0210260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTCAATATTATTTCTA+GGG + chr2_1:50400129-50400148 None:intergenic 10.0%
!!! TTTTTTTCAATATTATTTCT+AGG + chr2_1:50400130-50400149 None:intergenic 10.0%
!! ATTAAAAAAGATTGAAATTT+AGG + chr2_1:50400453-50400472 None:intergenic 10.0%
!!! TAAATTTCAATCTTTTTTAA+TGG - chr2_1:50400452-50400471 Msa0210260:intron 10.0%
!!! AAATTTCAATCTTTTTTAAT+GGG - chr2_1:50400453-50400472 Msa0210260:intron 10.0%
!! TTATATACATATAAATTCAT+TGG - chr2_1:50401735-50401754 Msa0210260:intron 10.0%
!!! TATTTTGAAAATTTTTAATC+AGG - chr2_1:50402012-50402031 Msa0210260:intron 10.0%
!!! ATTTTATAACATGTTAAATT+AGG - chr2_1:50404022-50404041 Msa0210260:intron 10.0%
!!! AATTACATATTATTTTTACA+TGG + chr2_1:50404271-50404290 None:intergenic 10.0%
!!! ATGGAAAATATTTAAATTTT+TGG - chr2_1:50404784-50404803 Msa0210260:intron 10.0%
!!! TGGAAAATATTTAAATTTTT+GGG - chr2_1:50404785-50404804 Msa0210260:intron 10.0%
!! AAATTAAAATTAAAATGCTA+TGG - chr2_1:50405142-50405161 Msa0210260:intron 10.0%
!! AAAAATAAGAAAAGAAAAGA+AGG - chr2_1:50400145-50400164 Msa0210260:three_prime_UTR 15.0%
!!! TTGTTTTGATTGATTTAATT+AGG - chr2_1:50400509-50400528 Msa0210260:intron 15.0%
!!! TGTTTTGATTGATTTAATTA+GGG - chr2_1:50400510-50400529 Msa0210260:intron 15.0%
!!! GTTAAGTATTTTTTTTTCTA+TGG - chr2_1:50400786-50400805 Msa0210260:intron 15.0%
!! TCTAATGTAATAATTTCTTT+AGG - chr2_1:50403603-50403622 Msa0210260:CDS 15.0%
!!! GCATTTTAATTTTAATTTAG+AGG + chr2_1:50405140-50405159 None:intergenic 15.0%
!!! TTGGTAATAATTATTTATTG+AGG - chr2_1:50405798-50405817 Msa0210260:five_prime_UTR 15.0%
!! TGGTAATAATTATTTATTGA+GGG - chr2_1:50405799-50405818 Msa0210260:five_prime_UTR 15.0%
!! TAATTTAATACAGCAAATAT+AGG + chr2_1:50405885-50405904 None:intergenic 15.0%
!! TTGAAATTTAGGAATAATGA+GGG + chr2_1:50400442-50400461 None:intergenic 20.0%
!! ATTGAAATTTAGGAATAATG+AGG + chr2_1:50400443-50400462 None:intergenic 20.0%
!!! TTCTTTCAATTTTAGGATTT+AGG - chr2_1:50400477-50400496 Msa0210260:intron 20.0%
!!! TCTTTCAATTTTAGGATTTA+GGG - chr2_1:50400478-50400497 Msa0210260:intron 20.0%
!!! AATTAGGGTAAATTTTCAAT+TGG - chr2_1:50400525-50400544 Msa0210260:intron 20.0%
!! TAGCATAAAACTACTAATTT+GGG + chr2_1:50400553-50400572 None:intergenic 20.0%
!! ATAGCATAAAACTACTAATT+TGG + chr2_1:50400554-50400573 None:intergenic 20.0%
!! ATTACACATACTACATAAAA+CGG + chr2_1:50400603-50400622 None:intergenic 20.0%
!!! TTTTATGTAGTATGTGTAAT+TGG - chr2_1:50400603-50400622 Msa0210260:intron 20.0%
!!! TTAAGAGTGTGATTAAATTA+TGG - chr2_1:50400634-50400653 Msa0210260:intron 20.0%
!!! TTTTGATTGTTATTGAACAT+AGG - chr2_1:50400669-50400688 Msa0210260:intron 20.0%
!!! TTTGATTGTTATTGAACATA+GGG - chr2_1:50400670-50400689 Msa0210260:intron 20.0%
!!! TTGAAAATTTGAAATTGCTT+TGG - chr2_1:50401012-50401031 Msa0210260:intron 20.0%
!! TGTTATCTTGAATAATTTGA+TGG - chr2_1:50401076-50401095 Msa0210260:CDS 20.0%
!!! TTAGAGTTTTTCTAACTTAA+AGG - chr2_1:50401309-50401328 Msa0210260:intron 20.0%
!! TCTGATAAAATTGTAAAACT+TGG - chr2_1:50402182-50402201 Msa0210260:intron 20.0%
!!! GTTGTTAATCAACATTTTAT+TGG - chr2_1:50402258-50402277 Msa0210260:intron 20.0%
!!! TTTTATTGGATGTTGATTTA+AGG - chr2_1:50402272-50402291 Msa0210260:intron 20.0%
!!! TTTATTGGATGTTGATTTAA+GGG - chr2_1:50402273-50402292 Msa0210260:intron 20.0%
!! TCTAACTCTTAATTTAAAGA+TGG + chr2_1:50403460-50403479 None:intergenic 20.0%
!! ATCTTTATTAGAAAGAACTA+GGG + chr2_1:50403778-50403797 None:intergenic 20.0%
!! TATCTTTATTAGAAAGAACT+AGG + chr2_1:50403779-50403798 None:intergenic 20.0%
!! TAACATGTTAAATTAGGATT+TGG - chr2_1:50404028-50404047 Msa0210260:intron 20.0%
!! TATAAAAAAAATTCAGAACG+AGG + chr2_1:50404076-50404095 None:intergenic 20.0%
!! TAAATGTTATTGAACAATCA+AGG + chr2_1:50404396-50404415 None:intergenic 20.0%
!! AAGAACATAAGATAAATTAG+CGG + chr2_1:50404938-50404957 None:intergenic 20.0%
!! CAATTTAATGAATTAACTAC+AGG - chr2_1:50404978-50404997 Msa0210260:intron 20.0%
!!! TAAATAGAAGTACAATAGTT+TGG - chr2_1:50405277-50405296 Msa0210260:intron 20.0%
!! ATAGACAAAAGTGAAAAATA+TGG + chr2_1:50405457-50405476 None:intergenic 20.0%
!! TTTAAAAAAGTAGTGAATAC+TGG + chr2_1:50405504-50405523 None:intergenic 20.0%
!! ATCAATTATATTCAGTAAAG+TGG - chr2_1:50405535-50405554 Msa0210260:intron 20.0%
!! TATCTTATTGTTTATACAGA+TGG - chr2_1:50405618-50405637 Msa0210260:intron 20.0%
!! ATCTTATTGTTTATACAGAT+GGG - chr2_1:50405619-50405638 Msa0210260:intron 20.0%
!!! TTCAATATTATTTCTAGGGA+GGG + chr2_1:50400125-50400144 None:intergenic 25.0%
!!! TTTCAATATTATTTCTAGGG+AGG + chr2_1:50400126-50400145 None:intergenic 25.0%
!!! AATGGGTTTCTTTCAATTTT+AGG - chr2_1:50400470-50400489 Msa0210260:intron 25.0%
!!! AATTTTAGGATTTAGGGTTA+GGG - chr2_1:50400484-50400503 Msa0210260:intron 25.0%
!!! GTAGTTTTATGCTATGTTTA+AGG - chr2_1:50400559-50400578 Msa0210260:intron 25.0%
!! TTGATTGTTATTGAACATAG+GGG - chr2_1:50400671-50400690 Msa0210260:intron 25.0%
!! TTCAGTTTCATAGTTTTCAT+TGG - chr2_1:50400711-50400730 Msa0210260:intron 25.0%
! TAATCATAACAACTAGTTGA+CGG + chr2_1:50401055-50401074 None:intergenic 25.0%
! AATCAACAAATTCACAACAT+GGG + chr2_1:50401459-50401478 None:intergenic 25.0%
! AAATCAACAAATTCACAACA+TGG + chr2_1:50401460-50401479 None:intergenic 25.0%
! GATAATAAATACTGCAGTTA+AGG + chr2_1:50401502-50401521 None:intergenic 25.0%
! AGCATTTACTAACTATACAA+AGG + chr2_1:50401555-50401574 None:intergenic 25.0%
! TATTTCAAGGATTTATAGTC+TGG - chr2_1:50401618-50401637 Msa0210260:intron 25.0%
! ATCAAAATAGAATTCCTAGA+GGG - chr2_1:50401800-50401819 Msa0210260:intron 25.0%
!! AAACAACATGTATTTTCTTC+AGG - chr2_1:50402049-50402068 Msa0210260:intron 25.0%
! AGAACTAAGATTATCAAATG+AGG - chr2_1:50402103-50402122 Msa0210260:intron 25.0%
! ATTATCAAATGAGGAACATA+GGG - chr2_1:50402112-50402131 Msa0210260:intron 25.0%
!!! ATTTTTTAAGCAGCTATGAA+GGG + chr2_1:50402622-50402641 None:intergenic 25.0%
!!! AATTTTTTAAGCAGCTATGA+AGG + chr2_1:50402623-50402642 None:intergenic 25.0%
! CAACACTATTTCATTTACTT+TGG - chr2_1:50402670-50402689 Msa0210260:intron 25.0%
! CAAATCTTAAACTGATTAAG+TGG + chr2_1:50402940-50402959 None:intergenic 25.0%
! TGTAAATGAATCATTGGAAT+GGG - chr2_1:50403045-50403064 Msa0210260:CDS 25.0%
! GAATGTCTAAAGAAATATGT+TGG - chr2_1:50403421-50403440 Msa0210260:intron 25.0%
!!! AGATGCTAAAAATGTTTTGA+AGG - chr2_1:50403947-50403966 Msa0210260:CDS 25.0%
!!! AATGTTTTGAAGGAAACTAT+TGG - chr2_1:50403957-50403976 Msa0210260:CDS 25.0%
!!! ATGTTTTGAAGGAAACTATT+GGG - chr2_1:50403958-50403977 Msa0210260:CDS 25.0%
! TTAAATAACAACCACAATTC+AGG + chr2_1:50404337-50404356 None:intergenic 25.0%
! TTACAAGACTGTATCTAATT+AGG + chr2_1:50404465-50404484 None:intergenic 25.0%
!!! TGATGGCAATAAATCTTTTT+TGG + chr2_1:50404639-50404658 None:intergenic 25.0%
!! GAGATTGTTTAATCTTTTCA+TGG - chr2_1:50404765-50404784 Msa0210260:intron 25.0%
!! CTTTACCTTCAATATTTTCT+TGG + chr2_1:50404874-50404893 None:intergenic 25.0%
! CAAGAAAATATTGAAGGTAA+AGG - chr2_1:50404872-50404891 Msa0210260:intron 25.0%
! AATTAAAATGCTATGGAGTA+TGG - chr2_1:50405149-50405168 Msa0210260:intron 25.0%
!! TACAATAGTTTGGAATAACA+AGG - chr2_1:50405287-50405306 Msa0210260:intron 25.0%
! ATATTAAATCGTAGGATGAT+TGG + chr2_1:50405417-50405436 None:intergenic 25.0%
! TTTGTCTATTTAAACAACCT+TGG - chr2_1:50405468-50405487 Msa0210260:intron 25.0%
! TCTTATTGTTTATACAGATG+GGG - chr2_1:50405620-50405639 Msa0210260:intron 25.0%
! TTGATTTAACATGTGAGAAA+TGG + chr2_1:50405653-50405672 None:intergenic 25.0%
! TTTCTCACATGTTAAATCAA+TGG - chr2_1:50405653-50405672 Msa0210260:intron 25.0%
! AGGATGACAATTATGTAATT+TGG - chr2_1:50405779-50405798 Msa0210260:five_prime_UTR 25.0%
!! GTATAAAAAGAGTATGATAG+TGG - chr2_1:50405852-50405871 Msa0210260:five_prime_UTR 25.0%
!!! CAATTTTAGGATTTAGGGTT+AGG - chr2_1:50400483-50400502 Msa0210260:intron 30.0%
! TGATTGTTATTGAACATAGG+GGG - chr2_1:50400672-50400691 Msa0210260:intron 30.0%
!!! GTTCTGTTTTGTTTAGCAAA+TGG - chr2_1:50400825-50400844 Msa0210260:intron 30.0%
TATAGTTCAAAATACGCGTT+AGG + chr2_1:50400883-50400902 None:intergenic 30.0%
CTTTCTTTACCTTAGCAATA+AGG - chr2_1:50401111-50401130 Msa0210260:intron 30.0%
! ATTGTCTATCCATTTGTTGA+CGG - chr2_1:50401281-50401300 Msa0210260:intron 30.0%
CACTTTCAAATATCCTCAAA+TGG - chr2_1:50401336-50401355 Msa0210260:intron 30.0%
TTAGCCAATATTGTGTCAAA+CGG + chr2_1:50401379-50401398 None:intergenic 30.0%
! TCTGGTTGATGTATATTTCA+AGG - chr2_1:50401605-50401624 Msa0210260:intron 30.0%
! TTGTTGTTGTTGTTATAGTC+CGG - chr2_1:50401693-50401712 Msa0210260:intron 30.0%
GTATAATAACAAAGTCAGTC+CGG + chr2_1:50401715-50401734 None:intergenic 30.0%
!!! ATTCTATTTTGATGTGTTGG+TGG + chr2_1:50401793-50401812 None:intergenic 30.0%
!!! GGAATTCTATTTTGATGTGT+TGG + chr2_1:50401796-50401815 None:intergenic 30.0%
CATCAAAATAGAATTCCTAG+AGG - chr2_1:50401799-50401818 Msa0210260:intron 30.0%
TCAAAATAGAATTCCTAGAG+GGG - chr2_1:50401801-50401820 Msa0210260:intron 30.0%
AAGAAAATGTACCCAAGTAA+TGG + chr2_1:50401974-50401993 None:intergenic 30.0%
GATTATCAAATGAGGAACAT+AGG - chr2_1:50402111-50402130 Msa0210260:intron 30.0%
TGTAAGTAAACATAGAAGTC+CGG - chr2_1:50402546-50402565 Msa0210260:intron 30.0%
!!! TTTTTTAAGCAGCTATGAAG+GGG + chr2_1:50402621-50402640 None:intergenic 30.0%
!! TGAAATAGTGTTGCTTATGT+AGG + chr2_1:50402663-50402682 None:intergenic 30.0%
!!! ACTTTGGTTCTTTTATATGC+AGG - chr2_1:50402686-50402705 Msa0210260:intron 30.0%
!!! CTTTGGTTCTTTTATATGCA+GGG - chr2_1:50402687-50402706 Msa0210260:intron 30.0%
AATAAAGCAATACCCTTCTT+CGG - chr2_1:50402734-50402753 Msa0210260:intron 30.0%
AGTACCTAATAGAGTTACTT+CGG - chr2_1:50402776-50402795 Msa0210260:intron 30.0%
TCATAGAAGTTATTGTCATC+AGG + chr2_1:50402876-50402895 None:intergenic 30.0%
GTGTAAATGAATCATTGGAA+TGG - chr2_1:50403044-50403063 Msa0210260:CDS 30.0%
!!! CTTTTAGTTTCAATTTCGCA+AGG + chr2_1:50403153-50403172 None:intergenic 30.0%
GATCCAAATCCTTTCATAAT+TGG + chr2_1:50403501-50403520 None:intergenic 30.0%
AATCCTAGGATTCATATGAA+TGG - chr2_1:50403545-50403564 Msa0210260:intron 30.0%
TTTCCATTCATATGAATCCT+AGG + chr2_1:50403551-50403570 None:intergenic 30.0%
!! ATGAATGGAAAAAGTACTAC+TGG - chr2_1:50403560-50403579 Msa0210260:CDS 30.0%
!! TGAATGGAAAAAGTACTACT+GGG - chr2_1:50403561-50403580 Msa0210260:CDS 30.0%
GGTAACTTTCAGCATAAATT+CGG - chr2_1:50403890-50403909 Msa0210260:intron 30.0%
TCATGAATGAATGCATAATG+TGG - chr2_1:50404208-50404227 Msa0210260:CDS 30.0%
GTTAAAGAGGTAACTGAAAA+CGG - chr2_1:50404719-50404738 Msa0210260:intron 30.0%
!!! AAATTTTTGGGTAACTTGTC+AGG - chr2_1:50404797-50404816 Msa0210260:intron 30.0%
TTCTCAATTTCATGTACATC+AGG + chr2_1:50404849-50404868 None:intergenic 30.0%
GAAAGCCAAGAAAATATTGA+AGG - chr2_1:50404866-50404885 Msa0210260:intron 30.0%
! AATACTGCAAAAGTGCAAAT+AGG + chr2_1:50405089-50405108 None:intergenic 30.0%
!! GATTTTCACTGATTATTGCT+TGG - chr2_1:50405314-50405333 Msa0210260:intron 30.0%
TGCTTGGTATATTAAATCGT+AGG + chr2_1:50405425-50405444 None:intergenic 30.0%
TACGATTTAATATACCAAGC+AGG - chr2_1:50405424-50405443 Msa0210260:intron 30.0%
ACGATTTAATATACCAAGCA+GGG - chr2_1:50405425-50405444 Msa0210260:intron 30.0%
TAGTGAATACTGGATACTTT+AGG + chr2_1:50405494-50405513 None:intergenic 30.0%
TTTATACACAGAATCAAGTG+TGG + chr2_1:50405583-50405602 None:intergenic 30.0%
CTTATTGTTTATACAGATGG+GGG - chr2_1:50405621-50405640 Msa0210260:intron 30.0%
TCTCTTGTATTCTATCAGAT+AGG - chr2_1:50405759-50405778 Msa0210260:five_prime_UTR 30.0%
ACCCATGATGATTAAGATTT+GGG + chr2_1:50405961-50405980 None:intergenic 30.0%
TACCCATGATGATTAAGATT+TGG + chr2_1:50405962-50405981 None:intergenic 30.0%
ATGAACGAATCGAAGATCTT+AGG + chr2_1:50400240-50400259 None:intergenic 35.0%
AAAGTGAAAGAGAATGAGGA+AGG + chr2_1:50400293-50400312 None:intergenic 35.0%
TAATCCATAGCCAGATTTCA+CGG + chr2_1:50400364-50400383 None:intergenic 35.0%
CATAATCAAGTTCATGGAAC+TGG + chr2_1:50400917-50400936 None:intergenic 35.0%
AACCGAATAAACCAGTTTAG+CGG + chr2_1:50400940-50400959 None:intergenic 35.0%
! TTATTCGGTTGGTATACTAG+TGG - chr2_1:50400950-50400969 Msa0210260:intron 35.0%
! TATTCGGTTGGTATACTAGT+GGG - chr2_1:50400951-50400970 Msa0210260:intron 35.0%
! TGAATAATTTGATGGCCTCT+TGG - chr2_1:50401084-50401103 Msa0210260:intron 35.0%
GGTAAAGAAAGAAAACCAAG+AGG + chr2_1:50401102-50401121 None:intergenic 35.0%
!!! GCGACTTTTCTGAAATAGAA+AGG - chr2_1:50401135-50401154 Msa0210260:intron 35.0%
! TTGTCTATCCATTTGTTGAC+GGG - chr2_1:50401282-50401301 Msa0210260:intron 35.0%
AACAAAAAGGTAGCCATTTG+AGG + chr2_1:50401352-50401371 None:intergenic 35.0%
GTCAAACGGGAAAAACAAAA+AGG + chr2_1:50401365-50401384 None:intergenic 35.0%
TTTCCCGTTTGACACAATAT+TGG - chr2_1:50401372-50401391 Msa0210260:CDS 35.0%
TAGCCAATATTGTGTCAAAC+GGG + chr2_1:50401378-50401397 None:intergenic 35.0%
TATGTCAGTGTTACACTGAA+TGG + chr2_1:50401415-50401434 None:intergenic 35.0%
! CAGATTTTACTAAATGCAGC+AGG + chr2_1:50401589-50401608 None:intergenic 35.0%
CTGCTGCATTTAGTAAAATC+TGG - chr2_1:50401587-50401606 Msa0210260:intron 35.0%
TCATTGGATGTAATGATTGC+AGG - chr2_1:50401751-50401770 Msa0210260:intron 35.0%
! CATGTATTTTCTTCAGGAGA+AGG - chr2_1:50402055-50402074 Msa0210260:intron 35.0%
TGACATCATCTGCATTAACA+CGG + chr2_1:50402148-50402167 None:intergenic 35.0%
ATGATGTCATACGAAGGATA+AGG - chr2_1:50402159-50402178 Msa0210260:intron 35.0%
ACCATAAGATTGTGATGGTA+CGG + chr2_1:50402416-50402435 None:intergenic 35.0%
TACCATCACAATCTTATGGT+GGG - chr2_1:50402416-50402435 Msa0210260:intron 35.0%
GGACTTCTATGTTTACTTAC+AGG + chr2_1:50402547-50402566 None:intergenic 35.0%
GAGAAGAAGAACAATGTAAC+CGG + chr2_1:50402568-50402587 None:intergenic 35.0%
!! GAAGGGTATTGCTTTATTGA+AGG + chr2_1:50402732-50402751 None:intergenic 35.0%
ATAAAGCAATACCCTTCTTC+GGG - chr2_1:50402735-50402754 Msa0210260:intron 35.0%
GTACCTAATAGAGTTACTTC+GGG - chr2_1:50402777-50402796 Msa0210260:intron 35.0%
TACATCTACTGGATTGTAGT+CGG + chr2_1:50402910-50402929 None:intergenic 35.0%
! GGGAAGTGTAAATGAATCAT+TGG - chr2_1:50403039-50403058 Msa0210260:CDS 35.0%
AGTTTCAATTTCGCAAGGTT+TGG + chr2_1:50403148-50403167 None:intergenic 35.0%
GTTAGATTTCCAATGTGTGT+TGG - chr2_1:50403474-50403493 Msa0210260:intron 35.0%
ATAATTGGACCAACACACAT+TGG + chr2_1:50403486-50403505 None:intergenic 35.0%
! TGTGTTGGTCCAATTATGAA+AGG - chr2_1:50403489-50403508 Msa0210260:intron 35.0%
GGTCCAATTATGAAAGGATT+TGG - chr2_1:50403495-50403514 Msa0210260:intron 35.0%
ATTTGGATCTCATAAGCATG+TGG - chr2_1:50403512-50403531 Msa0210260:intron 35.0%
TGAATCCTAGGATTTAACTG+AGG + chr2_1:50403539-50403558 None:intergenic 35.0%
TTTGAGAGAGTTAAGACCTT+TGG - chr2_1:50403691-50403710 Msa0210260:CDS 35.0%
TTGAGAGAGTTAAGACCTTT+GGG - chr2_1:50403692-50403711 Msa0210260:CDS 35.0%
TATAGGTGGCAGAATTTCAA+GGG + chr2_1:50403736-50403755 None:intergenic 35.0%
GAATTCCCTCAATAGAGTAT+AGG + chr2_1:50403753-50403772 None:intergenic 35.0%
AAGTTTCTATCACGTATCTC+AGG - chr2_1:50403800-50403819 Msa0210260:intron 35.0%
ACCAAATTGAGATGTCAAGT+TGG - chr2_1:50404150-50404169 Msa0210260:CDS 35.0%
GATTTATTGCCATCACAGAA+TGG - chr2_1:50404644-50404663 Msa0210260:intron 35.0%
ACAGAATGGAATCGGAAAAA+AGG - chr2_1:50404658-50404677 Msa0210260:intron 35.0%
CAGTAAAATAAATGGCAGAC+TGG + chr2_1:50404911-50404930 None:intergenic 35.0%
GGGTGTAGTGTAACAAATTA+TGG + chr2_1:50405389-50405408 None:intergenic 35.0%
CGATTTAATATACCAAGCAG+GGG - chr2_1:50405426-50405445 Msa0210260:intron 35.0%
TGAACACCTACGTTGTAAAA+TGG - chr2_1:50405688-50405707 Msa0210260:intron 35.0%
GAACACCTACGTTGTAAAAT+GGG - chr2_1:50405689-50405708 Msa0210260:intron 35.0%
! CTTTTCCCATTTTACAACGT+AGG + chr2_1:50405697-50405716 None:intergenic 35.0%
CTACGTTGTAAAATGGGAAA+AGG - chr2_1:50405695-50405714 Msa0210260:CDS 35.0%
ATTCAAGGAAGCAAAAGTCA+CGG - chr2_1:50405722-50405741 Msa0210260:five_prime_UTR 35.0%
CACCATTTATTCACAAGACT+TGG - chr2_1:50405913-50405932 Msa0210260:five_prime_UTR 35.0%
! CACCAAGTCTTGTGAATAAA+TGG + chr2_1:50405918-50405937 None:intergenic 35.0%
ACCCCAAATCTTAATCATCA+TGG - chr2_1:50405956-50405975 Msa0210260:five_prime_UTR 35.0%
CCCATGATGATTAAGATTTG+GGG + chr2_1:50405960-50405979 None:intergenic 35.0%
CCCCAAATCTTAATCATCAT+GGG - chr2_1:50405957-50405976 Msa0210260:five_prime_UTR 35.0%
! TGAGTTTCGATTTGTCGTGT+CGG + chr2_1:50400201-50400220 None:intergenic 40.0%
GAGTAGAGGAACAATGATTG+AGG + chr2_1:50400268-50400287 None:intergenic 40.0%
AGCGAAAGTGAAAGAGAATG+AGG + chr2_1:50400297-50400316 None:intergenic 40.0%
AATCCATAGCCAGATTTCAC+GGG + chr2_1:50400363-50400382 None:intergenic 40.0%
TACGAACCTTACGATAGTAG+TGG - chr2_1:50400382-50400401 Msa0210260:three_prime_UTR 40.0%
AGCTTACCACTACTATCGTA+AGG + chr2_1:50400391-50400410 None:intergenic 40.0%
TTATTGAACATAGGGGGCTA+TGG - chr2_1:50400678-50400697 Msa0210260:intron 40.0%
TAGCGGCATAATCAAGTTCA+TGG + chr2_1:50400923-50400942 None:intergenic 40.0%
ACTTGATTATGCCGCTAAAC+TGG - chr2_1:50400926-50400945 Msa0210260:intron 40.0%
! TGCCGCTAAACTGGTTTATT+CGG - chr2_1:50400935-50400954 Msa0210260:intron 40.0%
! GCTAAACTGGTTTATTCGGT+TGG - chr2_1:50400939-50400958 Msa0210260:intron 40.0%
! ATTCGGTTGGTATACTAGTG+GGG - chr2_1:50400952-50400971 Msa0210260:intron 40.0%
AACAACTAGTTGACGGTCTT+TGG + chr2_1:50401048-50401067 None:intergenic 40.0%
AAAGTCGCACCTTATTGCTA+AGG + chr2_1:50401123-50401142 None:intergenic 40.0%
GGTGATATCGGACTCTATAT+TGG - chr2_1:50401200-50401219 Msa0210260:intron 40.0%
! TGTCTATCCATTTGTTGACG+GGG - chr2_1:50401283-50401302 Msa0210260:intron 40.0%
CAGTGTTACACTGAATGGTA+GGG + chr2_1:50401410-50401429 None:intergenic 40.0%
TCAGTGTTACACTGAATGGT+AGG + chr2_1:50401411-50401430 None:intergenic 40.0%
TTGTTGCATTGAGTAGATCG+TGG - chr2_1:50401529-50401548 Msa0210260:CDS 40.0%
TCAATTTCACCGTACATCCT+GGG + chr2_1:50401874-50401893 None:intergenic 40.0%
GATGTACGGTGAAATTGACA+TGG - chr2_1:50401876-50401895 Msa0210260:intron 40.0%
TCAAATTCACCAACTTGAGC+AGG - chr2_1:50401903-50401922 Msa0210260:intron 40.0%
TCAAGCTGATGCCATTACTT+GGG - chr2_1:50401960-50401979 Msa0210260:intron 40.0%
ATGCAGATGATGTCATACGA+AGG - chr2_1:50402153-50402172 Msa0210260:intron 40.0%
!! TGGATGTTGATTTAAGGGAG+TGG - chr2_1:50402278-50402297 Msa0210260:intron 40.0%
TGCTTCTCGTAAGAAGCAAA+AGG - chr2_1:50402381-50402400 Msa0210260:intron 40.0%
TAAGATTGTGATGGTACGGA+CGG + chr2_1:50402412-50402431 None:intergenic 40.0%
TCCGTACCATCACAATCTTA+TGG - chr2_1:50402412-50402431 Msa0210260:intron 40.0%
GTACCATCACAATCTTATGG+TGG - chr2_1:50402415-50402434 Msa0210260:intron 40.0%
! CGTTTTCCAACAGAAGAAGA+TGG + chr2_1:50402487-50402506 None:intergenic 40.0%
TCTTCTTCTGTTGGAAAACG+TGG - chr2_1:50402487-50402506 Msa0210260:intron 40.0%
TAGTTTATCTGCAGTGAGCT+TGG - chr2_1:50402589-50402608 Msa0210260:intron 40.0%
GCTTATGTAGGCTTGAATAG+TGG + chr2_1:50402651-50402670 None:intergenic 40.0%
GTACCCGAAGTAACTCTATT+AGG + chr2_1:50402783-50402802 None:intergenic 40.0%
AATAGAGTTACTTCGGGTAC+TGG - chr2_1:50402783-50402802 Msa0210260:intron 40.0%
! GCAAGAAAGTACGAACAAGA+TGG - chr2_1:50402850-50402869 Msa0210260:intron 40.0%
GTGGATGTAAGTACATCTAC+TGG + chr2_1:50402921-50402940 None:intergenic 40.0%
CACAATCTGGTCTATGACAT+GGG - chr2_1:50403019-50403038 Msa0210260:CDS 40.0%
! GTCTTTGAGTAGAGTTCTGA+AGG - chr2_1:50403347-50403366 Msa0210260:CDS 40.0%
GCTAACATCACTAACTACAG+AGG + chr2_1:50403631-50403650 None:intergenic 40.0%
! TAGTTAGTGATGTTAGCCTG+TGG - chr2_1:50403634-50403653 Msa0210260:CDS 40.0%
AGTTAAGACCTTTGGGCATT+AGG - chr2_1:50403699-50403718 Msa0210260:CDS 40.0%
GTATAGGTGGCAGAATTTCA+AGG + chr2_1:50403737-50403756 None:intergenic 40.0%
TGCCACCTATACTCTATTGA+GGG - chr2_1:50403745-50403764 Msa0210260:CDS 40.0%
TTCCCTCAATAGAGTATAGG+TGG + chr2_1:50403750-50403769 None:intergenic 40.0%
AGATCTGTCTCTTACCTACT+GGG - chr2_1:50403823-50403842 Msa0210260:intron 40.0%
!!! ATCCCAGCCCACATTTTTTT+GGG + chr2_1:50403864-50403883 None:intergenic 40.0%
GCCAACTTGACATCTCAATT+TGG + chr2_1:50404154-50404173 None:intergenic 40.0%
ATAACAACCACAATTCAGGC+AGG + chr2_1:50404333-50404352 None:intergenic 40.0%
ATCAAGGTACACGAGAATAG+CGG + chr2_1:50404380-50404399 None:intergenic 40.0%
GACTGTATCTAATTAGGTGC+TGG + chr2_1:50404459-50404478 None:intergenic 40.0%
TCTCTCCGGAAGATATTCAA+TGG - chr2_1:50404492-50404511 Msa0210260:intron 40.0%
CTCTCCGGAAGATATTCAAT+GGG - chr2_1:50404493-50404512 Msa0210260:intron 40.0%
CCTACCCATTGAATATCTTC+CGG + chr2_1:50404500-50404519 None:intergenic 40.0%
CGGAAGATATTCAATGGGTA+GGG - chr2_1:50404498-50404517 Msa0210260:intron 40.0%
GGAAGATATTCAATGGGTAG+GGG - chr2_1:50404499-50404518 Msa0210260:intron 40.0%
! CTGGAATCAACCATCGTTTT+GGG - chr2_1:50404528-50404547 Msa0210260:intron 40.0%
! TGGAATCAACCATCGTTTTG+GGG - chr2_1:50404529-50404548 Msa0210260:intron 40.0%
TTGCCATCACAGAATGGAAT+CGG - chr2_1:50404650-50404669 Msa0210260:intron 40.0%
TTTCCGATTCCATTCTGTGA+TGG + chr2_1:50404656-50404675 None:intergenic 40.0%
CACAGACACACTAGTTAAAG+AGG - chr2_1:50404706-50404725 Msa0210260:intron 40.0%
!!! TTTTTGGGTAACTTGTCAGG+TGG - chr2_1:50404800-50404819 Msa0210260:intron 40.0%
GCGGCTAGCAGTAAAATAAA+TGG + chr2_1:50404919-50404938 None:intergenic 40.0%
CTCTTATCGATGCAATTGCA+AGG - chr2_1:50405013-50405032 Msa0210260:intron 40.0%
! GATCTTTCTGATGGCGATAA+TGG - chr2_1:50405042-50405061 Msa0210260:intron 40.0%
AATTATGGCCACTGTTTCCA+CGG + chr2_1:50405374-50405393 None:intergenic 40.0%
ATCGTAGGATGATTGGAAGT+GGG + chr2_1:50405410-50405429 None:intergenic 40.0%
AATCGTAGGATGATTGGAAG+TGG + chr2_1:50405411-50405430 None:intergenic 40.0%
ATACTGGATACTTTAGGCCA+AGG + chr2_1:50405488-50405507 None:intergenic 40.0%
ATTGTTTATACAGATGGGGG+CGG - chr2_1:50405624-50405643 Msa0210260:intron 40.0%
CGTTGTAAAATGGGAAAAGG+AGG - chr2_1:50405698-50405717 Msa0210260:CDS 40.0%
TTCAAGGAAGCAAAAGTCAC+GGG - chr2_1:50405723-50405742 Msa0210260:five_prime_UTR 40.0%
TTGAGGGTAAGATTTGACCT+AGG - chr2_1:50405815-50405834 Msa0210260:five_prime_UTR 40.0%
GGACTCGGAAACTGAGTTAT+TGG + chr2_1:50400180-50400199 None:intergenic 45.0%
GTGAAAGAGAATGAGGAAGG+AGG + chr2_1:50400290-50400309 None:intergenic 45.0%
AAGCGAAGTACAGAGATCGA+AGG + chr2_1:50400340-50400359 None:intergenic 45.0%
AACATAGGGGGCTATGGTAT+TGG - chr2_1:50400684-50400703 Msa0210260:intron 45.0%
TTGGTATACTAGTGGGGAAC+TGG - chr2_1:50400958-50400977 Msa0210260:intron 45.0%
TGGTATACTAGTGGGGAACT+GGG - chr2_1:50400959-50400978 Msa0210260:intron 45.0%
! GTCTATCCATTTGTTGACGG+GGG - chr2_1:50401284-50401303 Msa0210260:intron 45.0%
CTAAATCCCCCGTCAACAAA+TGG + chr2_1:50401293-50401312 None:intergenic 45.0%
! GGACTGACTTTGATCCATGT+AGG - chr2_1:50401639-50401658 Msa0210260:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr2_1:50401668-50401687 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2_1:50401669-50401688 None:intergenic 45.0%
ATGTCATACCCCAGGATGTA+CGG - chr2_1:50401862-50401881 Msa0210260:intron 45.0%
CAATTTCACCGTACATCCTG+GGG + chr2_1:50401873-50401892 None:intergenic 45.0%
GTCAATTTCACCGTACATCC+TGG + chr2_1:50401875-50401894 None:intergenic 45.0%
! GGCATCAGCTTGAGCTTTAA+AGG + chr2_1:50401953-50401972 None:intergenic 45.0%
CTCAAGCTGATGCCATTACT+TGG - chr2_1:50401959-50401978 Msa0210260:intron 45.0%
GAGGAACATAGGGAACTTCT+AGG - chr2_1:50402122-50402141 Msa0210260:intron 45.0%
TTACGAGAAGCAGAGACTGT+TGG + chr2_1:50402373-50402392 None:intergenic 45.0%
TGGGGATGAAATGAAGGAGA+AGG + chr2_1:50402442-50402461 None:intergenic 45.0%
AACAGAAGAAGATGGCTGGT+GGG + chr2_1:50402479-50402498 None:intergenic 45.0%
TTCCAACAGAAGAAGATGGC+TGG + chr2_1:50402483-50402502 None:intergenic 45.0%
! AAGGTGCTCCTGGTAATACT+TGG + chr2_1:50402713-50402732 None:intergenic 45.0%
!! TGCTTTATTGAAGGTGCTCC+TGG + chr2_1:50402723-50402742 None:intergenic 45.0%
GCATCAATTGATCCACTCGT+TGG - chr2_1:50402828-50402847 Msa0210260:intron 45.0%
TGCAGACGCTGAAAAGTTAG+AGG + chr2_1:50403001-50403020 None:intergenic 45.0%
! TTTTCAGCGTCTGCACAATC+TGG - chr2_1:50403006-50403025 Msa0210260:intron 45.0%
GCACAATCTGGTCTATGACA+TGG - chr2_1:50403018-50403037 Msa0210260:CDS 45.0%
!! GGAATGGGTTAATCTGTCAG+AGG - chr2_1:50403060-50403079 Msa0210260:CDS 45.0%
GTGGTCCTCAGTTAAATCCT+AGG - chr2_1:50403531-50403550 Msa0210260:intron 45.0%
ACTGGGATGTGCTCAAACTT+TGG - chr2_1:50403578-50403597 Msa0210260:CDS 45.0%
TATGTCCTTGTATGCACCAC+AGG + chr2_1:50403653-50403672 None:intergenic 45.0%
GTGCATACAAGGACATAGAC+TGG - chr2_1:50403656-50403675 Msa0210260:CDS 45.0%
CTGCCACCTATACTCTATTG+AGG - chr2_1:50403744-50403763 Msa0210260:CDS 45.0%
GAGATCTGTCTCTTACCTAC+TGG - chr2_1:50403822-50403841 Msa0210260:intron 45.0%
CTACTGGGTAAAATGCTCCA+GGG - chr2_1:50403838-50403857 Msa0210260:intron 45.0%
TCCAGGGCCCAAAAAAATGT+GGG - chr2_1:50403854-50403873 Msa0210260:intron 45.0%
!!! CATCCCAGCCCACATTTTTT+TGG + chr2_1:50403865-50403884 None:intergenic 45.0%
CAGTAATCCTGCCTGAATTG+TGG - chr2_1:50404323-50404342 Msa0210260:intron 45.0%
ATATCTTCCGGAGAGATCTG+CGG + chr2_1:50404488-50404507 None:intergenic 45.0%
CCGGAAGATATTCAATGGGT+AGG - chr2_1:50404497-50404516 Msa0210260:intron 45.0%
AGATATTCAATGGGTAGGGG+AGG - chr2_1:50404502-50404521 Msa0210260:intron 45.0%
! CCAAAACGATGGTTGATTCC+AGG + chr2_1:50404530-50404549 None:intergenic 45.0%
! CCTGGAATCAACCATCGTTT+TGG - chr2_1:50404527-50404546 Msa0210260:intron 45.0%
! GGAATCAACCATCGTTTTGG+GGG - chr2_1:50404530-50404549 Msa0210260:intron 45.0%
TGGAATCGGAAAAAAGGCTC+TGG - chr2_1:50404664-50404683 Msa0210260:intron 45.0%
! GGTAACTTGTCAGGTGGAAA+GGG - chr2_1:50404806-50404825 Msa0210260:intron 45.0%
AGGCTTGCAGATCTTTCTGA+TGG - chr2_1:50405033-50405052 Msa0210260:intron 45.0%
TTCATCTTACTTCCATGCCG+TGG - chr2_1:50405354-50405373 Msa0210260:intron 45.0%
TCGTAGGATGATTGGAAGTG+GGG + chr2_1:50405409-50405428 None:intergenic 45.0%
AATATGGAATCACCCCTGCT+TGG + chr2_1:50405441-50405460 None:intergenic 45.0%
TTCAGTAAAGTGGCCAGTGA+TGG - chr2_1:50405545-50405564 Msa0210260:intron 45.0%
GAGATCCATTGTTCCATCAC+TGG + chr2_1:50405561-50405580 None:intergenic 45.0%
!! ATGGGAAAAGGAGGCATTCA+AGG - chr2_1:50405707-50405726 Msa0210260:exon 45.0%
TACAAGCAGAAGCTGATCCT+AGG + chr2_1:50405835-50405854 None:intergenic 45.0%
!! CACAAGACTTGGTGACTGTT+TGG - chr2_1:50405924-50405943 Msa0210260:five_prime_UTR 45.0%
!!! ATTTAATAATTCTAAAATAT+TGG - chr2_1:50403227-50403246 Msa0210260:CDS 5.0%
! TCGATTTGTCGTGTCGGACT+CGG + chr2_1:50400195-50400214 None:intergenic 50.0%
GAATGAGGAAGGAGGAGTAG+AGG + chr2_1:50400282-50400301 None:intergenic 50.0%
ACTTCGCTTCCCGTGAAATC+TGG - chr2_1:50400351-50400370 Msa0210260:three_prime_UTR 50.0%
CTTCCCGTGAAATCTGGCTA+TGG - chr2_1:50400357-50400376 Msa0210260:three_prime_UTR 50.0%
CTGACCGCTTCTGGTGATAT+CGG - chr2_1:50401188-50401207 Msa0210260:intron 50.0%
GAGTCCGATATCACCAGAAG+CGG + chr2_1:50401195-50401214 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr2_1:50401670-50401689 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr2_1:50401667-50401686 Msa0210260:intron 50.0%
CTTAGTGGGATAAGGCTTGG+TGG - chr2_1:50401670-50401689 Msa0210260:intron 50.0%
TAGGTTCGATGTCATACCCC+AGG - chr2_1:50401854-50401873 Msa0210260:intron 50.0%
TATACGCGTCCTGCTCAAGT+TGG + chr2_1:50401915-50401934 None:intergenic 50.0%
TTAAGGGAGTGGAGACAGAC+AGG - chr2_1:50402289-50402308 Msa0210260:intron 50.0%
TGTCCAGAACTCAGCACACT+GGG + chr2_1:50402325-50402344 None:intergenic 50.0%
ATGTCCAGAACTCAGCACAC+TGG + chr2_1:50402326-50402345 None:intergenic 50.0%
GAAGCAGAGACTGTTGGACT+TGG + chr2_1:50402367-50402386 None:intergenic 50.0%
GGCCCACCATAAGATTGTGA+TGG + chr2_1:50402421-50402440 None:intergenic 50.0%
ACAGAAGAAGATGGCTGGTG+GGG + chr2_1:50402478-50402497 None:intergenic 50.0%
CAACAGAAGAAGATGGCTGG+TGG + chr2_1:50402480-50402499 None:intergenic 50.0%
CACCAGCCATCTTCTTCTGT+TGG - chr2_1:50402478-50402497 Msa0210260:intron 50.0%
TGGACCTGTTCCAGGAACTA+AGG - chr2_1:50402507-50402526 Msa0210260:intron 50.0%
GGACCTGTTCCAGGAACTAA+GGG - chr2_1:50402508-50402527 Msa0210260:intron 50.0%
TTGCCCTTAGTTCCTGGAAC+AGG + chr2_1:50402514-50402533 None:intergenic 50.0%
TGCTTCTTGCCCTTAGTTCC+TGG + chr2_1:50402520-50402539 None:intergenic 50.0%
ATGCAGGGCCAAGTATTACC+AGG - chr2_1:50402702-50402721 Msa0210260:intron 50.0%
AATACCCTTCTTCGGGACCA+GGG - chr2_1:50402742-50402761 Msa0210260:intron 50.0%
CGTACTTTCTTGCCAACGAG+TGG + chr2_1:50402843-50402862 None:intergenic 50.0%
! GTTAGCCTGTGGTGCATACA+AGG - chr2_1:50403645-50403664 Msa0210260:CDS 50.0%
AGACCTTTGGGCATTAGGAG+AGG - chr2_1:50403704-50403723 Msa0210260:CDS 50.0%
!! CCTGGAGCATTTTACCCAGT+AGG + chr2_1:50403840-50403859 None:intergenic 50.0%
CCTACTGGGTAAAATGCTCC+AGG - chr2_1:50403837-50403856 Msa0210260:intron 50.0%
CTCCAGGGCCCAAAAAAATG+TGG - chr2_1:50403853-50403872 Msa0210260:intron 50.0%
GGCCCAAAAAAATGTGGGCT+GGG - chr2_1:50403859-50403878 Msa0210260:intron 50.0%
!! AATGTGGGCTGGGATGTGTT+TGG - chr2_1:50403869-50403888 Msa0210260:intron 50.0%
TTACATGGAACCAGCAGCTG+CGG + chr2_1:50404256-50404275 None:intergenic 50.0%
CTTGTAACCGCAGATCTCTC+CGG - chr2_1:50404478-50404497 Msa0210260:intron 50.0%
!!! AACCATCGTTTTGGGGGATC+TGG - chr2_1:50404536-50404555 Msa0210260:intron 50.0%
GATCTGGTCGTGGGATGAAT+AGG - chr2_1:50404552-50404571 Msa0210260:intron 50.0%
CGTGGGATGAATAGGTCTGT+AGG - chr2_1:50404560-50404579 Msa0210260:intron 50.0%
! GTAGGTCGTGATAGTGTTCC+AGG - chr2_1:50404578-50404597 Msa0210260:intron 50.0%
! AAGAGGTAGGGGAGGTACAA+AGG - chr2_1:50404607-50404626 Msa0210260:intron 50.0%
! AGAGGTAGGGGAGGTACAAA+GGG - chr2_1:50404608-50404627 Msa0210260:intron 50.0%
! GGGTAACTTGTCAGGTGGAA+AGG - chr2_1:50404805-50404824 Msa0210260:intron 50.0%
! AGTGGCCAGTGATGGAACAA+TGG - chr2_1:50405553-50405572 Msa0210260:intron 50.0%
! CTCTTGCTGCTTGAGGTGCT+TGG + chr2_1:50401165-50401184 None:intergenic 55.0%
CAAGCACCTCAAGCAGCAAG+AGG - chr2_1:50401163-50401182 Msa0210260:intron 55.0%
! TCAGCACCTCTTGCTGCTTG+AGG + chr2_1:50401172-50401191 None:intergenic 55.0%
ACTAAGTGGGGCAGCCTACA+TGG + chr2_1:50401656-50401675 None:intergenic 55.0%
ATGTAGGCTGCCCCACTTAG+TGG - chr2_1:50401655-50401674 Msa0210260:intron 55.0%
TGTAGGCTGCCCCACTTAGT+GGG - chr2_1:50401656-50401675 Msa0210260:intron 55.0%
CTGCCCCACTTAGTGGGATA+AGG - chr2_1:50401662-50401681 Msa0210260:intron 55.0%
AACTCAGCACACTGGGCTGA+TGG + chr2_1:50402318-50402337 None:intergenic 55.0%
!! ACGGGCTGGGGATGAAATGA+AGG + chr2_1:50402448-50402467 None:intergenic 55.0%
TTCATTTCATCCCCAGCCCG+TGG - chr2_1:50402447-50402466 Msa0210260:intron 55.0%
GGAAAACGTGGACCTGTTCC+AGG - chr2_1:50402499-50402518 Msa0210260:intron 55.0%
CAATACCCTTCTTCGGGACC+AGG - chr2_1:50402741-50402760 Msa0210260:intron 55.0%
ATACCCTTCTTCGGGACCAG+GGG - chr2_1:50402743-50402762 Msa0210260:intron 55.0%
GGTACTTGATTCCTTCCCCC+TGG + chr2_1:50402762-50402781 None:intergenic 55.0%
!! GTTACTTCGGGTACTGGCAC+AGG - chr2_1:50402789-50402808 Msa0210260:intron 55.0%
GCACCTCTCCTAATGCCCAA+AGG + chr2_1:50403710-50403729 None:intergenic 55.0%
!!! GCCCACATTTTTTTGGGCCC+TGG + chr2_1:50403858-50403877 None:intergenic 55.0%
GGGCCCAAAAAAATGTGGGC+TGG - chr2_1:50403858-50403877 Msa0210260:intron 55.0%
GACCAGATCCCCCAAAACGA+TGG + chr2_1:50404541-50404560 None:intergenic 55.0%
!!! GTTTTGGGGGATCTGGTCGT+GGG - chr2_1:50404543-50404562 Msa0210260:intron 55.0%
! GAGGTAGGGGAGGTACAAAG+GGG - chr2_1:50404609-50404628 Msa0210260:intron 55.0%
CTTCCATGCCGTGGAAACAG+TGG - chr2_1:50405363-50405382 Msa0210260:intron 55.0%
!! CAAGAGGTGCTGACCGCTTC+TGG - chr2_1:50401179-50401198 Msa0210260:intron 60.0%
! CTAGAGGGGCACGTCTTGCT+GGG - chr2_1:50401815-50401834 Msa0210260:intron 60.0%
GGGCACGTCTTGCTGGGAAT+GGG - chr2_1:50401821-50401840 Msa0210260:intron 60.0%
GGGAATGGGCGATCTGCAGT+AGG - chr2_1:50401835-50401854 Msa0210260:intron 60.0%
AGGGAGTGGAGACAGACAGG+AGG - chr2_1:50402292-50402311 Msa0210260:intron 60.0%
CAGCCCAGTGTGCTGAGTTC+TGG - chr2_1:50402319-50402338 Msa0210260:intron 60.0%
TACCCTTCTTCGGGACCAGG+GGG - chr2_1:50402744-50402763 Msa0210260:intron 60.0%
TTCCCCCTGGTCCCGAAGAA+GGG + chr2_1:50402749-50402768 None:intergenic 60.0%
!! TGGCACAGGTGAGCTTGCTG+AGG - chr2_1:50402803-50402822 Msa0210260:intron 60.0%
!! GGCACAGGTGAGCTTGCTGA+GGG - chr2_1:50402804-50402823 Msa0210260:intron 60.0%
CAGTTGAAGACCGCAGCTGC+TGG - chr2_1:50404243-50404262 Msa0210260:CDS 60.0%
CAATGGGTAGGGGAGGAACC+TGG - chr2_1:50404509-50404528 Msa0210260:intron 60.0%
!!! CGTTTTGGGGGATCTGGTCG+TGG - chr2_1:50404542-50404561 Msa0210260:intron 60.0%
! CGTGATAGTGTTCCAGGCGC+TGG - chr2_1:50404584-50404603 Msa0210260:intron 60.0%
!! AGTGTTCCAGGCGCTGGAAG+AGG - chr2_1:50404590-50404609 Msa0210260:intron 60.0%
!! TTCCAGGCGCTGGAAGAGGT+AGG - chr2_1:50404594-50404613 Msa0210260:intron 60.0%
!! TCCAGGCGCTGGAAGAGGTA+GGG - chr2_1:50404595-50404614 Msa0210260:intron 60.0%
TGGCCACTGTTTCCACGGCA+TGG + chr2_1:50405369-50405388 None:intergenic 60.0%
CCAGCAAGACGTGCCCCTCT+AGG + chr2_1:50401817-50401836 None:intergenic 65.0%
! CCTAGAGGGGCACGTCTTGC+TGG - chr2_1:50401814-50401833 Msa0210260:intron 65.0%
GGGGCACGTCTTGCTGGGAA+TGG - chr2_1:50401820-50401839 Msa0210260:intron 65.0%
CTTCCCCCTGGTCCCGAAGA+AGG + chr2_1:50402750-50402769 None:intergenic 65.0%
CTTCTTCGGGACCAGGGGGA+AGG - chr2_1:50402748-50402767 Msa0210260:intron 65.0%
!! CCAGGCGCTGGAAGAGGTAG+GGG - chr2_1:50404596-50404615 Msa0210260:intron 65.0%
TGGCTGGTGGGGTGCAGCCA+CGG + chr2_1:50402467-50402486 None:intergenic 70.0%
CCCCTACCTCTTCCAGCGCC+TGG + chr2_1:50404599-50404618 None:intergenic 70.0%
! GGCGCTGGAAGAGGTAGGGG+AGG - chr2_1:50404599-50404618 Msa0210260:intron 70.0%
! TGGGGTGCAGCCACGGGCTG+GGG + chr2_1:50402460-50402479 None:intergenic 75.0%
GTGGGGTGCAGCCACGGGCT+GGG + chr2_1:50402461-50402480 None:intergenic 75.0%
GGCTGGTGGGGTGCAGCCAC+GGG + chr2_1:50402466-50402485 None:intergenic 75.0%
! GGTGGGGTGCAGCCACGGGC+TGG + chr2_1:50402462-50402481 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 50400110 50405985 50400110 ID=Msa0210260;Name=Msa0210260
chr2_1 mRNA 50400110 50405985 50400110 ID=Msa0210260-mRNA-1;Parent=Msa0210260;Name=Msa0210260-mRNA-1;_AED=0.06;_eAED=0.06;_QI=266|0.88|0.9|1|0.77|0.9|10|299|432
chr2_1 exon 50400110 50400458 50400110 ID=Msa0210260-mRNA-1:exon:13923;Parent=Msa0210260-mRNA-1
chr2_1 exon 50401032 50401095 50401032 ID=Msa0210260-mRNA-1:exon:13922;Parent=Msa0210260-mRNA-1
chr2_1 exon 50401208 50401276 50401208 ID=Msa0210260-mRNA-1:exon:13921;Parent=Msa0210260-mRNA-1
chr2_1 exon 50401368 50401604 50401368 ID=Msa0210260-mRNA-1:exon:13920;Parent=Msa0210260-mRNA-1
chr2_1 exon 50403014 50403082 50403014 ID=Msa0210260-mRNA-1:exon:13919;Parent=Msa0210260-mRNA-1
chr2_1 exon 50403169 50403387 50403169 ID=Msa0210260-mRNA-1:exon:13918;Parent=Msa0210260-mRNA-1
chr2_1 exon 50403549 50403792 50403549 ID=Msa0210260-mRNA-1:exon:13917;Parent=Msa0210260-mRNA-1
chr2_1 exon 50403915 50404024 50403915 ID=Msa0210260-mRNA-1:exon:13916;Parent=Msa0210260-mRNA-1
chr2_1 exon 50404114 50404322 50404114 ID=Msa0210260-mRNA-1:exon:13915;Parent=Msa0210260-mRNA-1
chr2_1 exon 50405692 50405985 50405692 ID=Msa0210260-mRNA-1:exon:13914;Parent=Msa0210260-mRNA-1
chr2_1 five_prime_UTR 50405720 50405985 50405720 ID=Msa0210260-mRNA-1:five_prime_utr;Parent=Msa0210260-mRNA-1
chr2_1 CDS 50405692 50405719 50405692 ID=Msa0210260-mRNA-1:cds;Parent=Msa0210260-mRNA-1
chr2_1 CDS 50404114 50404322 50404114 ID=Msa0210260-mRNA-1:cds;Parent=Msa0210260-mRNA-1
chr2_1 CDS 50403915 50404024 50403915 ID=Msa0210260-mRNA-1:cds;Parent=Msa0210260-mRNA-1
chr2_1 CDS 50403549 50403792 50403549 ID=Msa0210260-mRNA-1:cds;Parent=Msa0210260-mRNA-1
chr2_1 CDS 50403169 50403387 50403169 ID=Msa0210260-mRNA-1:cds;Parent=Msa0210260-mRNA-1
chr2_1 CDS 50403014 50403082 50403014 ID=Msa0210260-mRNA-1:cds;Parent=Msa0210260-mRNA-1
chr2_1 CDS 50401368 50401604 50401368 ID=Msa0210260-mRNA-1:cds;Parent=Msa0210260-mRNA-1
chr2_1 CDS 50401208 50401276 50401208 ID=Msa0210260-mRNA-1:cds;Parent=Msa0210260-mRNA-1
chr2_1 CDS 50401032 50401095 50401032 ID=Msa0210260-mRNA-1:cds;Parent=Msa0210260-mRNA-1
chr2_1 CDS 50400409 50400458 50400409 ID=Msa0210260-mRNA-1:cds;Parent=Msa0210260-mRNA-1
chr2_1 three_prime_UTR 50400110 50400408 50400110 ID=Msa0210260-mRNA-1:three_prime_utr;Parent=Msa0210260-mRNA-1
Gene Sequence

>Msa0210260

ATGGATTACGAACCTTACGATAGTAGTGGTACTGATGATGATCTTCCACCAACACATCAAAATAGAATTCCTAGAGGGGCACGTCTTGCTGGGAATGGGCGATCTGCAGTAGGTTCGATGTCATACCCCAGGATGTACGGTGAAATTGACATGGAAGCTCAAATTCACCAACTTGAGCAGGACGCGTATAGTTCAGTTTTACGAGCCTTTAAAGCTCAAGCTGATGCCATTACTTGGGAGAAGGAAAGCTTGATAACAGAACTAAGAAAAGAACTAAGATTATCAAATGAGGAACATAGGGAACTTCTAGGCCGTGTTAATGCAGATGATGTCATACGAAGGATAAGACAGACAGGAGGCCATCAGCCCAGTGTGCTGAGTTCTGGACATGTTATTCACGATTCAGTTCCAAGTCCAACAGTCTCTGCTTCTCGTAAGAAGCAAAAGGTAACACCGTCCGTACCATCACAATCTTATGGTGGGCCTTCTCCTTCATTTCATCCCCAGCCCGTGGCTGCACCCCACCAGCCATCTTCTTCTGTTGGAAAACGTGGACCTGTTCCAGGAACTAAGGGCAAGAAGCAAAAACCTGGCCAAGTATTACCAGGAGCACCTTCAATAAAGCAATACCCTTCTTCGGGACCAGGGGGAAGGAATCAAGTACCTAATAGAGTTACTTCGGGTACTGGCACAGGTGAGCTTGCTGAGGGAGCATCAATTGATCCACTCGTTGGCAAGAAAGTACGAACAAGATGGCCTGATGACAATAACTTCTATGAAGCAGTTATCACCGACTACAATCCAGTAGATCGTCTGCACAATCTGGTCTATGACATGGGAAGTGTAAATGAATCATTGGAATGGGTTAATCTGTCAGAGATCTCTCCGGAAGATATTCAATGGGTAGGGGAGGAACCTGGAATCAACCATCGTTTTGGGGGATCTGGTCGTGGGATGAATAGGTCTGTAGGTCGTGATAGTGTTCCAGGCGCTGGAAGAGGTAGGGGAGGTACAAAGGGGCAATCCAAAAAAGATTTATTGCCATCACAGAATGGAATCGGAAAAAAGGCTCTGGATGATATACAAATACTTCACACAGACACACTAGTTAAAGAGGTGGAAAGGGTGTTCAGTGCAAATCATCCTGATGTACATGAAATTGAGAAAGCCAAGAAAATATTGAAGGATCATGAGCAAGCTCTTATCGATGCAATTGCAAGGCTTGCAGATCTTTCTGATGGCGATAATGATGGGGGCGGTCGCCATTTCTCACATGTTAAATCAATGGATCGAGAATGA

Protein sequence

>Msa0210260

MDYEPYDSSGTDDDLPPTHQNRIPRGARLAGNGRSAVGSMSYPRMYGEIDMEAQIHQLEQDAYSSVLRAFKAQADAITWEKESLITELRKELRLSNEEHRELLGRVNADDVIRRIRQTGGHQPSVLSSGHVIHDSVPSPTVSASRKKQKVTPSVPSQSYGGPSPSFHPQPVAAPHQPSSSVGKRGPVPGTKGKKQKPGQVLPGAPSIKQYPSSGPGGRNQVPNRVTSGTGTGELAEGASIDPLVGKKVRTRWPDDNNFYEAVITDYNPVDRLHNLVYDMGSVNESLEWVNLSEISPEDIQWVGEEPGINHRFGGSGRGMNRSVGRDSVPGAGRGRGGTKGQSKKDLLPSQNGIGKKALDDIQILHTDTLVKEVERVFSANHPDVHEIEKAKKILKDHEQALIDAIARLADLSDGDNDGGGRHFSHVKSMDRE*