Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0628400 | KEH28769.1 | 96.127 | 723 | 20 | 3 | 1 | 716 | 1 | 722 | 0.0 | 1408 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0628400 | sp|Q93ZJ9|MLN51_ARATH | 37.662 | 693 | 305 | 26 | 8 | 675 | 7 | 597 | 3.71e-92 | 302 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002560 | Msa0628400 | 0.805689 | 1.182248e-49 | -8.615850e-47 |
Msa0003220 | Msa0628400 | 0.833961 | 3.947235e-56 | -8.615850e-47 |
Msa0003270 | Msa0628400 | 0.831246 | 1.861422e-55 | -8.615850e-47 |
Msa0010770 | Msa0628400 | 0.824102 | 9.681129e-54 | -8.615850e-47 |
Msa0015090 | Msa0628400 | 0.805063 | 1.599649e-49 | -8.615850e-47 |
Msa0023330 | Msa0628400 | 0.829601 | 4.697676e-55 | -8.615850e-47 |
Msa0026910 | Msa0628400 | 0.804639 | 1.961436e-49 | -8.615850e-47 |
Msa0030300 | Msa0628400 | 0.805331 | 1.405598e-49 | -8.615850e-47 |
Msa0031180 | Msa0628400 | 0.829656 | 4.555712e-55 | -8.615850e-47 |
Msa0045340 | Msa0628400 | 0.815864 | 7.429440e-52 | -8.615850e-47 |
Msa0047640 | Msa0628400 | 0.816936 | 4.277153e-52 | -8.615850e-47 |
Msa0049750 | Msa0628400 | 0.816799 | 4.590114e-52 | -8.615850e-47 |
Msa0051740 | Msa0628400 | 0.809041 | 2.301342e-50 | -8.615850e-47 |
Msa0054820 | Msa0628400 | 0.813838 | 2.089923e-51 | -8.615850e-47 |
Msa0065650 | Msa0628400 | 0.811546 | 6.632874e-51 | -8.615850e-47 |
Msa0074750 | Msa0628400 | 0.847376 | 1.202557e-59 | -8.615850e-47 |
Msa0078480 | Msa0628400 | 0.826884 | 2.123027e-54 | -8.615850e-47 |
Msa0081650 | Msa0628400 | 0.802822 | 4.674326e-49 | -8.615850e-47 |
Msa0090550 | Msa0628400 | 0.806298 | 8.805640e-50 | -8.615850e-47 |
Msa0091780 | Msa0628400 | 0.819577 | 1.079409e-52 | -8.615850e-47 |
Msa0092440 | Msa0628400 | 0.805104 | 1.567938e-49 | -8.615850e-47 |
Msa0096580 | Msa0628400 | 0.814716 | 1.337193e-51 | -8.615850e-47 |
Msa0100160 | Msa0628400 | 0.813477 | 2.509282e-51 | -8.615850e-47 |
Msa0103480 | Msa0628400 | 0.824475 | 7.909579e-54 | -8.615850e-47 |
Msa0106620 | Msa0628400 | 0.805942 | 1.046287e-49 | -8.615850e-47 |
Msa0111080 | Msa0628400 | 0.858082 | 1.051185e-62 | -8.615850e-47 |
Msa0116080 | Msa0628400 | 0.801410 | 9.124906e-49 | -8.615850e-47 |
Msa0614510 | Msa0628400 | 0.812502 | 4.104369e-51 | -8.615850e-47 |
Msa0618950 | Msa0628400 | 0.828567 | 8.368935e-55 | -8.615850e-47 |
Msa0618970 | Msa0628400 | 0.831594 | 1.528049e-55 | -8.615850e-47 |
Msa0623990 | Msa0628400 | 0.814148 | 1.785092e-51 | -8.615850e-47 |
Msa0624060 | Msa0628400 | 0.810784 | 9.704030e-51 | -8.615850e-47 |
Msa0628400 | Msa0628420 | 0.843753 | 1.154007e-58 | -8.615850e-47 |
Msa0628400 | Msa0628500 | 0.812211 | 4.750970e-51 | -8.615850e-47 |
Msa0628400 | Msa0640940 | 0.860616 | 1.824121e-63 | -8.615850e-47 |
Msa0628400 | Msa0641730 | 0.819156 | 1.346235e-52 | -8.615850e-47 |
Msa0628400 | Msa0652690 | 0.835646 | 1.486942e-56 | -8.615850e-47 |
Msa0628400 | Msa0665080 | 0.801169 | 1.022350e-48 | -8.615850e-47 |
Msa0628400 | Msa0672550 | 0.818720 | 1.691435e-52 | -8.615850e-47 |
Msa0628400 | Msa0676130 | 0.803713 | 3.057497e-49 | -8.615850e-47 |
Msa0628400 | Msa0679360 | 0.859156 | 5.024226e-63 | -8.615850e-47 |
Msa0628400 | Msa0689420 | 0.811996 | 5.293561e-51 | -8.615850e-47 |
Msa0628400 | Msa0689440 | 0.805208 | 1.491354e-49 | -8.615850e-47 |
Msa0628400 | Msa0697720 | 0.803576 | 3.263767e-49 | -8.615850e-47 |
Msa0628400 | Msa0705390 | 0.852568 | 4.238099e-61 | -8.615850e-47 |
Msa0628400 | Msa0705990 | 0.831280 | 1.825359e-55 | -8.615850e-47 |
Msa0628400 | Msa0713320 | 0.803959 | 2.717825e-49 | -8.615850e-47 |
Msa0628400 | Msa0743530 | 0.821615 | 3.674422e-53 | -8.615850e-47 |
Msa0628400 | Msa0746170 | 0.800769 | 1.233974e-48 | -8.615850e-47 |
Msa0628400 | Msa0746210 | 0.802061 | 6.706084e-49 | -8.615850e-47 |
Msa0628400 | Msa0748730 | 0.820503 | 6.627160e-53 | -8.615850e-47 |
Msa0628400 | Msa0750850 | 0.804027 | 2.630763e-49 | -8.615850e-47 |
Msa0628400 | Msa0752700 | 0.801823 | 7.505473e-49 | -8.615850e-47 |
Msa0628400 | Msa0756380 | 0.831483 | 1.627182e-55 | -8.615850e-47 |
Msa0628400 | Msa0763890 | 0.837593 | 4.744362e-57 | -8.615850e-47 |
Msa0628400 | Msa0763920 | 0.840726 | 7.308646e-58 | -8.615850e-47 |
Msa0628400 | Msa0787150 | 0.809885 | 1.516465e-50 | -8.615850e-47 |
Msa0628400 | Msa0789560 | 0.840158 | 1.028859e-57 | -8.615850e-47 |
Msa0628400 | Msa0794970 | 0.805332 | 1.404745e-49 | -8.615850e-47 |
Msa0628400 | Msa0811040 | 0.801923 | 7.160670e-49 | -8.615850e-47 |
Msa0628400 | Msa0813500 | 0.800920 | 1.148995e-48 | -8.615850e-47 |
Msa0628400 | Msa0831100 | 0.815241 | 1.022522e-51 | -8.615850e-47 |
Msa0628400 | Msa0834750 | 0.810111 | 1.355701e-50 | -8.615850e-47 |
Msa0628400 | Msa0844110 | 0.817705 | 2.870576e-52 | -8.615850e-47 |
Msa0628400 | Msa0853950 | 0.829031 | 6.462239e-55 | -8.615850e-47 |
Msa0628400 | Msa0866400 | 0.800859 | 1.182902e-48 | -8.615850e-47 |
Msa0628400 | Msa0892640 | 0.803447 | 3.471235e-49 | -8.615850e-47 |
Msa0628400 | Msa0903780 | 0.800360 | 1.495198e-48 | -8.615850e-47 |
Msa0628400 | Msa0933760 | 0.803536 | 3.326767e-49 | -8.615850e-47 |
Msa0628400 | Msa0934140 | 0.814929 | 1.199128e-51 | -8.615850e-47 |
Msa0628400 | Msa0945240 | 0.841552 | 4.434178e-58 | -8.615850e-47 |
Msa0628400 | Msa0958030 | 0.815502 | 8.947325e-52 | -8.615850e-47 |
Msa0628400 | Msa0970600 | 0.800470 | 1.419630e-48 | -8.615850e-47 |
Msa0628400 | Msa0971650 | 0.804789 | 1.825147e-49 | -8.615850e-47 |
Msa0628400 | Msa0983770 | 0.802207 | 6.259610e-49 | -8.615850e-47 |
Msa0628400 | Msa0985180 | 0.811301 | 7.497704e-51 | -8.615850e-47 |
Msa0628400 | Msa0986510 | 0.805810 | 1.115012e-49 | -8.615850e-47 |
Msa0628400 | Msa0992580 | 0.802283 | 6.039399e-49 | -8.615850e-47 |
Msa0628400 | Msa0994370 | 0.804092 | 2.549430e-49 | -8.615850e-47 |
Msa0628400 | Msa1002960 | 0.803461 | 3.448360e-49 | -8.615850e-47 |
Msa0628400 | Msa1008750 | 0.806163 | 9.400361e-50 | -8.615850e-47 |
Msa0628400 | Msa1026640 | 0.801027 | 1.092555e-48 | -8.615850e-47 |
Msa0628400 | Msa1034280 | 0.805920 | 1.057593e-49 | -8.615850e-47 |
Msa0628400 | Msa1034500 | 0.802418 | 5.663827e-49 | -8.615850e-47 |
Msa0628400 | Msa1042660 | 0.831888 | 1.293021e-55 | -8.615850e-47 |
Msa0628400 | Msa1063420 | 0.802131 | 6.489229e-49 | -8.615850e-47 |
Msa0628400 | Msa1072900 | 0.821220 | 4.532439e-53 | -8.615850e-47 |
Msa0628400 | Msa1077070 | 0.818768 | 1.649641e-52 | -8.615850e-47 |
Msa0628400 | Msa1121110 | 0.807192 | 5.699734e-50 | -8.615850e-47 |
Msa0628400 | Msa1122780 | 0.820930 | 5.286903e-53 | -8.615850e-47 |
Msa0628400 | Msa1127430 | 0.855953 | 4.462575e-62 | -8.615850e-47 |
Msa0628400 | Msa1130400 | 0.813535 | 2.437520e-51 | -8.615850e-47 |
Msa0628400 | Msa1130530 | 0.811852 | 5.690567e-51 | -8.615850e-47 |
Msa0628400 | Msa1144040 | 0.819966 | 8.798558e-53 | -8.615850e-47 |
Msa0628400 | Msa1163870 | 0.807899 | 4.034198e-50 | -8.615850e-47 |
Msa0628400 | Msa1201640 | 0.833974 | 3.917265e-56 | -8.615850e-47 |
Msa0628400 | Msa1205480 | 0.827979 | 1.160079e-54 | -8.615850e-47 |
Msa0628400 | Msa1205590 | 0.854454 | 1.218116e-61 | -8.615850e-47 |
Msa0628400 | Msa1208790 | 0.805727 | 1.161187e-49 | -8.615850e-47 |
Msa0628400 | Msa1209190 | 0.825093 | 5.657730e-54 | -8.615850e-47 |
Msa0628400 | Msa1211340 | 0.839692 | 1.361419e-57 | -8.615850e-47 |
Msa0628400 | Msa1215920 | 0.819952 | 8.862996e-53 | -8.615850e-47 |
Msa0628400 | Msa1221330 | 0.801393 | 9.198918e-49 | -8.615850e-47 |
Msa0628400 | Msa1227320 | 0.812785 | 3.560196e-51 | -8.615850e-47 |
Msa0628400 | Msa1250110 | 0.823102 | 1.659543e-53 | -8.615850e-47 |
Msa0628400 | Msa1250730 | 0.819027 | 1.440774e-52 | -8.615850e-47 |
Msa0628400 | Msa1254620 | 0.815895 | 7.313577e-52 | -8.615850e-47 |
Msa0628400 | Msa1258370 | 0.801479 | 8.831533e-49 | -8.615850e-47 |
Msa0628400 | Msa1258980 | 0.800640 | 1.310644e-48 | -8.615850e-47 |
Msa0628400 | Msa1259640 | 0.841593 | 4.324421e-58 | -8.615850e-47 |
Msa0628400 | Msa1262010 | 0.801729 | 7.848091e-49 | -8.615850e-47 |
Msa0628400 | Msa1270660 | 0.834387 | 3.086230e-56 | -8.615850e-47 |
Msa0628400 | Msa1270730 | 0.824071 | 9.845755e-54 | -8.615850e-47 |
Msa0628400 | Msa1297530 | 0.851601 | 7.980711e-61 | -8.615850e-47 |
Msa0628400 | Msa1299330 | 0.818984 | 1.473367e-52 | -8.615850e-47 |
Msa0628400 | Msa1304810 | 0.818514 | 1.884137e-52 | -8.615850e-47 |
Msa0628400 | Msa1329790 | 0.837510 | 4.981152e-57 | -8.615850e-47 |
Msa0628400 | Msa1330270 | 0.804553 | 2.044435e-49 | -8.615850e-47 |
Msa0628400 | Msa1330630 | 0.806030 | 1.002670e-49 | -8.615850e-47 |
Msa0628400 | Msa1332050 | 0.809372 | 1.954641e-50 | -8.615850e-47 |
Msa0628400 | Msa1336040 | 0.839501 | 1.525598e-57 | -8.615850e-47 |
Msa0628400 | Msa1340130 | 0.811071 | 8.408511e-51 | -8.615850e-47 |
Msa0628400 | Msa1341490 | 0.837558 | 4.842391e-57 | -8.615850e-47 |
Msa0628400 | Msa1344660 | 0.803769 | 2.976671e-49 | -8.615850e-47 |
Msa0628400 | Msa1359560 | 0.826847 | 2.166872e-54 | -8.615850e-47 |
Msa0628400 | Msa1369890 | 0.807429 | 5.077719e-50 | -8.615850e-47 |
Msa0628400 | Msa1370590 | 0.818143 | 2.286156e-52 | -8.615850e-47 |
Msa0628400 | Msa1372290 | 0.837688 | 4.483531e-57 | -8.615850e-47 |
Msa0628400 | Msa1378410 | 0.812362 | 4.404818e-51 | -8.615850e-47 |
Msa0628400 | Msa1384100 | 0.817428 | 3.314526e-52 | -8.615850e-47 |
Msa0628400 | Msa1400120 | 0.836010 | 1.202397e-56 | -8.615850e-47 |
Msa0628400 | Msa1400930 | 0.850920 | 1.243071e-60 | -8.615850e-47 |
Msa0628400 | Msa1401460 | 0.839755 | 1.311004e-57 | -8.615850e-47 |
Msa0628400 | Msa1411950 | 0.826865 | 2.145210e-54 | -8.615850e-47 |
Msa0628400 | Msa1411980 | 0.916884 | 1.039667e-85 | -8.615850e-47 |
Msa0628400 | Msa1426570 | 0.806509 | 7.946045e-50 | -8.615850e-47 |
Msa0628400 | Msa1426910 | 0.843680 | 1.207128e-58 | -8.615850e-47 |
Msa0628400 | Msa1428780 | 0.832035 | 1.189324e-55 | -8.615850e-47 |
Msa0628400 | Msa1437330 | 0.837251 | 5.802504e-57 | -8.615850e-47 |
Msa0628400 | Msa1438520 | 0.827504 | 1.508627e-54 | -8.615850e-47 |
Msa0628400 | Msa1438840 | 0.806942 | 6.438253e-50 | -8.615850e-47 |
Msa0628400 | Msa1442790 | 0.821829 | 3.278470e-53 | -8.615850e-47 |
Msa0628400 | Msa1444120 | 0.821775 | 3.374446e-53 | -8.615850e-47 |
Msa0628400 | Msa1446080 | 0.819446 | 1.156669e-52 | -8.615850e-47 |
Msa0628400 | Msa1448490 | 0.805650 | 1.204772e-49 | -8.615850e-47 |
Msa0628400 | Msa1450720 | 0.836147 | 1.109270e-56 | -8.615850e-47 |
Msa0628400 | Msa1454960 | 0.822670 | 2.091713e-53 | -8.615850e-47 |
Msa0628400 | Msa1458810 | 0.807608 | 4.652818e-50 | -8.615850e-47 |
Msa0628400 | Msa1463030 | 0.803234 | 3.842111e-49 | -8.615850e-47 |
Msa0126790 | Msa0628400 | 0.812754 | 3.615325e-51 | -8.615850e-47 |
Msa0130720 | Msa0628400 | 0.830730 | 2.490921e-55 | -8.615850e-47 |
Msa0131700 | Msa0628400 | 0.802827 | 4.664538e-49 | -8.615850e-47 |
Msa0138210 | Msa0628400 | 0.837756 | 4.308472e-57 | -8.615850e-47 |
Msa0142500 | Msa0628400 | 0.821745 | 3.429716e-53 | -8.615850e-47 |
Msa0143850 | Msa0628400 | 0.811803 | 5.830574e-51 | -8.615850e-47 |
Msa0144780 | Msa0628400 | 0.812740 | 3.641815e-51 | -8.615850e-47 |
Msa0146080 | Msa0628400 | 0.816667 | 4.914489e-52 | -8.615850e-47 |
Msa0149440 | Msa0628400 | 0.809214 | 2.113569e-50 | -8.615850e-47 |
Msa0154920 | Msa0628400 | 0.843898 | 1.055422e-58 | -8.615850e-47 |
Msa0160960 | Msa0628400 | 0.809381 | 1.946687e-50 | -8.615850e-47 |
Msa0171870 | Msa0628400 | 0.829622 | 4.643320e-55 | -8.615850e-47 |
Msa0173800 | Msa0628400 | 0.804388 | 2.212273e-49 | -8.615850e-47 |
Msa0177170 | Msa0628400 | 0.810102 | 1.362070e-50 | -8.615850e-47 |
Msa0183420 | Msa0628400 | 0.852544 | 4.306997e-61 | -8.615850e-47 |
Msa0183760 | Msa0628400 | 0.816744 | 4.723383e-52 | -8.615850e-47 |
Msa0183870 | Msa0628400 | 0.801970 | 7.002261e-49 | -8.615850e-47 |
Msa0187490 | Msa0628400 | 0.818803 | 1.619501e-52 | -8.615850e-47 |
Msa0202410 | Msa0628400 | 0.825854 | 3.735421e-54 | -8.615850e-47 |
Msa0202730 | Msa0628400 | 0.827283 | 1.704172e-54 | -8.615850e-47 |
Msa0210260 | Msa0628400 | 0.858000 | 1.111957e-62 | -8.615850e-47 |
Msa0220730 | Msa0628400 | 0.801678 | 8.039595e-49 | -8.615850e-47 |
Msa0227230 | Msa0628400 | 0.804124 | 2.511366e-49 | -8.615850e-47 |
Msa0230680 | Msa0628400 | 0.802857 | 4.596590e-49 | -8.615850e-47 |
Msa0232340 | Msa0628400 | 0.819090 | 1.393955e-52 | -8.615850e-47 |
Msa0233370 | Msa0628400 | 0.837779 | 4.249524e-57 | -8.615850e-47 |
Msa0237200 | Msa0628400 | 0.812825 | 3.489030e-51 | -8.615850e-47 |
Msa0376020 | Msa0628400 | 0.815504 | 8.935782e-52 | -8.615850e-47 |
Msa0376600 | Msa0628400 | 0.808917 | 2.446440e-50 | -8.615850e-47 |
Msa0377450 | Msa0628400 | 0.800692 | 1.279481e-48 | -8.615850e-47 |
Msa0378970 | Msa0628400 | 0.806982 | 6.315043e-50 | -8.615850e-47 |
Msa0382310 | Msa0628400 | 0.825014 | 5.903171e-54 | -8.615850e-47 |
Msa0382370 | Msa0628400 | 0.822426 | 2.384507e-53 | -8.615850e-47 |
Msa0387050 | Msa0628400 | 0.834009 | 3.840572e-56 | -8.615850e-47 |
Msa0392270 | Msa0628400 | 0.825950 | 3.543721e-54 | -8.615850e-47 |
Msa0395980 | Msa0628400 | 0.873942 | 9.943416e-68 | -8.615850e-47 |
Msa0403490 | Msa0628400 | 0.817693 | 2.888471e-52 | -8.615850e-47 |
Msa0417650 | Msa0628400 | 0.820871 | 5.454588e-53 | -8.615850e-47 |
Msa0430060 | Msa0628400 | 0.814992 | 1.161571e-51 | -8.615850e-47 |
Msa0430150 | Msa0628400 | 0.811035 | 8.561551e-51 | -8.615850e-47 |
Msa0431210 | Msa0628400 | 0.827044 | 1.944072e-54 | -8.615850e-47 |
Msa0432160 | Msa0628400 | 0.807465 | 4.987937e-50 | -8.615850e-47 |
Msa0432500 | Msa0628400 | 0.810487 | 1.125122e-50 | -8.615850e-47 |
Msa0440510 | Msa0628400 | 0.875263 | 3.536525e-68 | -8.615850e-47 |
Msa0442310 | Msa0628400 | 0.817094 | 3.941385e-52 | -8.615850e-47 |
Msa0458640 | Msa0628400 | 0.806396 | 8.395683e-50 | -8.615850e-47 |
Msa0468250 | Msa0628400 | 0.824072 | 9.840601e-54 | -8.615850e-47 |
Msa0474940 | Msa0628400 | 0.800159 | 1.642490e-48 | -8.615850e-47 |
Msa0476680 | Msa0628400 | 0.817306 | 3.531210e-52 | -8.615850e-47 |
Msa0480780 | Msa0628400 | 0.838661 | 2.518226e-57 | -8.615850e-47 |
Msa0481030 | Msa0628400 | 0.816098 | 6.589658e-52 | -8.615850e-47 |
Msa0481280 | Msa0628400 | 0.819295 | 1.251732e-52 | -8.615850e-47 |
Msa0481970 | Msa0628400 | 0.803811 | 2.917119e-49 | -8.615850e-47 |
Msa0244970 | Msa0628400 | 0.839356 | 1.664254e-57 | -8.615850e-47 |
Msa0244980 | Msa0628400 | 0.807946 | 3.941946e-50 | -8.615850e-47 |
Msa0245430 | Msa0628400 | 0.805638 | 1.211759e-49 | -8.615850e-47 |
Msa0249310 | Msa0628400 | 0.818083 | 2.358496e-52 | -8.615850e-47 |
Msa0265600 | Msa0628400 | 0.802574 | 5.259199e-49 | -8.615850e-47 |
Msa0271790 | Msa0628400 | 0.851830 | 6.874780e-61 | -8.615850e-47 |
Msa0274970 | Msa0628400 | 0.813452 | 2.541483e-51 | -8.615850e-47 |
Msa0280150 | Msa0628400 | 0.821063 | 4.927313e-53 | -8.615850e-47 |
Msa0287790 | Msa0628400 | 0.804832 | 1.787884e-49 | -8.615850e-47 |
Msa0289390 | Msa0628400 | 0.802053 | 6.734132e-49 | -8.615850e-47 |
Msa0290760 | Msa0628400 | 0.800187 | 1.620834e-48 | -8.615850e-47 |
Msa0308440 | Msa0628400 | 0.830572 | 2.723485e-55 | -8.615850e-47 |
Msa0308560 | Msa0628400 | 0.814337 | 1.621559e-51 | -8.615850e-47 |
Msa0310430 | Msa0628400 | 0.833700 | 4.586576e-56 | -8.615850e-47 |
Msa0311720 | Msa0628400 | 0.805068 | 1.595287e-49 | -8.615850e-47 |
Msa0315680 | Msa0628400 | 0.814093 | 1.836081e-51 | -8.615850e-47 |
Msa0318880 | Msa0628400 | 0.815004 | 1.154492e-51 | -8.615850e-47 |
Msa0321690 | Msa0628400 | 0.844137 | 9.104680e-59 | -8.615850e-47 |
Msa0341840 | Msa0628400 | 0.805695 | 1.179013e-49 | -8.615850e-47 |
Msa0347950 | Msa0628400 | 0.838881 | 2.209393e-57 | -8.615850e-47 |
Msa0347990 | Msa0628400 | 0.845311 | 4.395024e-59 | -8.615850e-47 |
Msa0358400 | Msa0628400 | 0.822223 | 2.657494e-53 | -8.615850e-47 |
Msa0362890 | Msa0628400 | 0.860776 | 1.631302e-63 | -8.615850e-47 |
Msa0482940 | Msa0628400 | 0.818851 | 1.579985e-52 | -8.615850e-47 |
Msa0487720 | Msa0628400 | 0.819572 | 1.082271e-52 | -8.615850e-47 |
Msa0489660 | Msa0628400 | 0.808846 | 2.533393e-50 | -8.615850e-47 |
Msa0491000 | Msa0628400 | 0.873570 | 1.327031e-67 | -8.615850e-47 |
Msa0500470 | Msa0628400 | 0.804012 | 2.649869e-49 | -8.615850e-47 |
Msa0516020 | Msa0628400 | 0.815485 | 9.022713e-52 | -8.615850e-47 |
Msa0518170 | Msa0628400 | 0.823018 | 1.735754e-53 | -8.615850e-47 |
Msa0520270 | Msa0628400 | 0.837777 | 4.254273e-57 | -8.615850e-47 |
Msa0521010 | Msa0628400 | 0.818099 | 2.339243e-52 | -8.615850e-47 |
Msa0526020 | Msa0628400 | 0.805742 | 1.152744e-49 | -8.615850e-47 |
Msa0530290 | Msa0628400 | 0.809035 | 2.308498e-50 | -8.615850e-47 |
Msa0531220 | Msa0628400 | 0.916000 | 3.013796e-85 | -8.615850e-47 |
Msa0531250 | Msa0628400 | 0.850170 | 2.018618e-60 | -8.615850e-47 |
Msa0542560 | Msa0628400 | 0.812189 | 4.805388e-51 | -8.615850e-47 |
Msa0544170 | Msa0628400 | 0.816317 | 5.886781e-52 | -8.615850e-47 |
Msa0544730 | Msa0628400 | 0.804090 | 2.551840e-49 | -8.615850e-47 |
Msa0560500 | Msa0628400 | 0.820684 | 6.023129e-53 | -8.615850e-47 |
Msa0566350 | Msa0628400 | 0.827576 | 1.449953e-54 | -8.615850e-47 |
Msa0566750 | Msa0628400 | 0.832878 | 7.352170e-56 | -8.615850e-47 |
Msa0573040 | Msa0628400 | 0.804684 | 1.919741e-49 | -8.615850e-47 |
Msa0581400 | Msa0628400 | 0.816334 | 5.835453e-52 | -8.615850e-47 |
Msa0585070 | Msa0628400 | 0.811130 | 8.167335e-51 | -8.615850e-47 |
Msa0588090 | Msa0628400 | 0.846142 | 2.615438e-59 | -8.615850e-47 |
Msa0594200 | Msa0628400 | 0.809724 | 1.642726e-50 | -8.615850e-47 |
Msa0600080 | Msa0628400 | 0.814179 | 1.757394e-51 | -8.615850e-47 |
Msa0600450 | Msa0628400 | 0.864367 | 1.279787e-64 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0628400 | MtrunA17_Chr4g0004221 | 96.188 | 682 | 18 | 3 | 1 | 675 | 1 | 681 | 0.0 | 1318 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0628400 | AT1G80000.4 | 37.662 | 693 | 305 | 25 | 8 | 675 | 7 | 597 | 3.19e-93 | 302 |
Msa0628400 | AT1G80000.1 | 37.662 | 693 | 305 | 26 | 8 | 675 | 7 | 597 | 3.77e-93 | 302 |
Msa0628400 | AT1G80000.2 | 37.662 | 693 | 305 | 26 | 8 | 675 | 7 | 597 | 3.77e-93 | 302 |
Msa0628400 | AT1G80000.3 | 37.662 | 693 | 305 | 26 | 8 | 675 | 7 | 597 | 3.77e-93 | 302 |
Msa0628400 | AT1G15280.2 | 33.763 | 699 | 311 | 30 | 5 | 676 | 1 | 574 | 2.52e-48 | 180 |
Msa0628400 | AT1G15280.1 | 34.192 | 699 | 307 | 30 | 5 | 676 | 1 | 573 | 2.66e-47 | 177 |
Find 273 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGGTGCTGCAGGAGCTTT+AGG | 0.093760 | 4_3:-9039737 | Msa0628400:CDS |
TTCAAGAAACTTTGCATAAA+AGG | 0.130703 | 4_3:-9043192 | Msa0628400:five_prime_UTR |
CTTCTTGAATTCAGTTAATT+TGG | 0.138584 | 4_3:-9038216 | Msa0628400:three_prime_UTR |
TCCCCATTTCTTGTCATCTT+TGG | 0.156157 | 4_3:+9041947 | None:intergenic |
AATAAATTTCAAGACTTTCT+AGG | 0.173388 | 4_3:-9039025 | Msa0628400:intron |
TTTCCCAGGCCTGCTGGGCC+TGG | 0.179598 | 4_3:-9041019 | Msa0628400:CDS |
AGAAGGTAATTATCTGATTT+TGG | 0.196276 | 4_3:+9043411 | None:intergenic |
TCCTGCTGGTGCTGCCAATT+TGG | 0.200071 | 4_3:+9041239 | None:intergenic |
AGATTCTGGTGAGGTTAATT+TGG | 0.215442 | 4_3:-9042616 | Msa0628400:CDS |
TCAATTAATTCACTTGATTC+TGG | 0.221617 | 4_3:-9040788 | Msa0628400:CDS |
CCTTTCAATTTCTTCAATTA+GGG | 0.226988 | 4_3:-9043273 | Msa0628400:five_prime_UTR |
TCCTTTCAATTTCTTCAATT+AGG | 0.230665 | 4_3:-9043274 | Msa0628400:five_prime_UTR |
AATGGGTGCTGCTGGAAATA+TGG | 0.244592 | 4_3:-9040651 | Msa0628400:CDS |
CTGGTGCTGCAGGAGCTTTA+GGG | 0.252912 | 4_3:-9039736 | Msa0628400:CDS |
AAACCCTAGATTGGAGATTT+AGG | 0.253364 | 4_3:+9043323 | None:intergenic |
TTGGCACCGCCTGGATCTTC+TGG | 0.261857 | 4_3:-9041064 | Msa0628400:CDS |
AATGAGATAGATTGTGAAAA+TGG | 0.263454 | 4_3:+9043248 | None:intergenic |
TTCCCAGGCCTGCTGGGCCT+GGG | 0.264948 | 4_3:-9041018 | Msa0628400:CDS |
ACATGCATGATGACCGCTTT+AGG | 0.265341 | 4_3:-9042542 | Msa0628400:CDS |
AGATATTCGGAGATGAATTT+TGG | 0.283446 | 4_3:-9039236 | Msa0628400:intron |
GGTTAATTTGGAGGAGAAAA+AGG | 0.297971 | 4_3:-9042604 | Msa0628400:CDS |
TCTCCCAGGCCCAGCAGGCC+TGG | 0.299414 | 4_3:+9041015 | None:intergenic |
GGTAAGAAGGTGGGGAAGTT+TGG | 0.301540 | 4_3:+9040611 | None:intergenic |
GTTATGCAGGCCTTACTCTT+AGG | 0.302721 | 4_3:-9039090 | Msa0628400:intron |
AGCGATCTTTGCGCCTCTTC+AGG | 0.305425 | 4_3:+9042957 | None:intergenic |
CCAGTCTTGGCTGGTGCTGC+AGG | 0.308531 | 4_3:-9039746 | Msa0628400:CDS |
AAATTTAGAGGAGACCTTCT+AGG | 0.309627 | 4_3:-9041786 | Msa0628400:intron |
GGAAAACCCTCATCCATAAC+TGG | 0.318201 | 4_3:+9041208 | None:intergenic |
TGCTAATCCTCAGCTTGGTT+TGG | 0.321347 | 4_3:-9039897 | Msa0628400:CDS |
CATGCATGATGACCGCTTTA+GGG | 0.321585 | 4_3:-9042541 | Msa0628400:CDS |
TTGGATGCAGTCATGCAATT+TGG | 0.329391 | 4_3:-9039980 | Msa0628400:intron |
GCCTATGAACAATGTTCATT+TGG | 0.337723 | 4_3:-9041083 | Msa0628400:CDS |
AAAGGTGAAGGTGGGGTTGA+TGG | 0.341140 | 4_3:-9042696 | Msa0628400:CDS |
CGGTGCTTACGGTCGTCAAC+CGG | 0.343382 | 4_3:-9039681 | Msa0628400:CDS |
AGGCCTGCTGGGCCTGGGAG+AGG | 0.346448 | 4_3:-9041013 | Msa0628400:CDS |
TCAAGAAACTTTGCATAAAA+GGG | 0.348530 | 4_3:-9043191 | Msa0628400:five_prime_UTR |
CACTCCTAAATCTCCAATCT+AGG | 0.350586 | 4_3:-9043327 | Msa0628400:five_prime_UTR |
GCTAATCCTCAGCTTGGTTT+GGG | 0.356032 | 4_3:-9039896 | Msa0628400:CDS |
GGAAGGGATTGAGCGGGGAT+TGG | 0.356597 | 4_3:+9043294 | None:intergenic |
AATAGAGAGGATTACGTAGA+AGG | 0.360941 | 4_3:+9043394 | None:intergenic |
AGTTGAAGAAGAAGTTTATG+AGG | 0.363132 | 4_3:-9042721 | Msa0628400:CDS |
GCTCCCCAGGGTCCTGGAAG+GGG | 0.366185 | 4_3:-9040701 | Msa0628400:CDS |
CTCCCAGGCCCAGCAGGCCT+GGG | 0.366979 | 4_3:+9041016 | None:intergenic |
TGGTTCTGTGATTGTGGTTA+AGG | 0.368642 | 4_3:-9042676 | Msa0628400:CDS |
GAAGAGCCCGAGGGGTAAAA+TGG | 0.369185 | 4_3:+9041298 | None:intergenic |
CCTCAGCAATTGATAATTCA+AGG | 0.369818 | 4_3:-9039652 | Msa0628400:intron |
AGAGTGAAGATCTTCGTGTT+AGG | 0.371660 | 4_3:-9042851 | Msa0628400:CDS |
TGGTGGTGTGGTACCCTCTT+TGG | 0.371982 | 4_3:-9042646 | Msa0628400:CDS |
GAAGGGAAATGGTGCTCCCC+AGG | 0.372847 | 4_3:-9040714 | Msa0628400:CDS |
TTGATATTCCTACTAATAGT+TGG | 0.373012 | 4_3:-9038298 | Msa0628400:three_prime_UTR |
TTATGGTGGGGCACAGGTAA+TGG | 0.376092 | 4_3:-9040669 | Msa0628400:CDS |
ATTCAGTTAATTTGGATGAA+TGG | 0.377479 | 4_3:-9038208 | Msa0628400:three_prime_UTR |
AGGAAATTTCAGTGCAAGAT+AGG | 0.381935 | 4_3:-9041911 | Msa0628400:CDS |
ACAGATGTGGCCTCAGAATC+AGG | 0.383483 | 4_3:-9040761 | Msa0628400:CDS |
CTTGCTGTTGACGGTGCTTA+CGG | 0.389589 | 4_3:-9039692 | Msa0628400:CDS |
TAAACAAAAGGTCCCCTTCC+AGG | 0.390813 | 4_3:+9040689 | None:intergenic |
GGCCCAGCAGGCCTGGGAAA+AGG | 0.391455 | 4_3:+9041022 | None:intergenic |
GAAGGGATTGAGCGGGGATT+GGG | 0.392390 | 4_3:+9043295 | None:intergenic |
GAAGAAGAGGAAAGAGGGGC+AGG | 0.394336 | 4_3:-9042897 | Msa0628400:CDS |
AGGCCAGCATCCTGGTGGTA+TGG | 0.395524 | 4_3:-9039957 | Msa0628400:CDS |
CCATTTGCTGTGCCCACTGC+TGG | 0.395842 | 4_3:-9042573 | Msa0628400:CDS |
TATGGTGGGGCACAGGTAAT+GGG | 0.396131 | 4_3:-9040668 | Msa0628400:CDS |
AAAACAATACCCAACAATAA+AGG | 0.396490 | 4_3:+9038343 | None:intergenic |
GCGGTCATCATGCATGTAAA+AGG | 0.402067 | 4_3:+9042548 | None:intergenic |
TTTCTTGAATCGATTGAAGT+TGG | 0.403091 | 4_3:+9043206 | None:intergenic |
GCCAAATGAACATTGTTCAT+AGG | 0.404842 | 4_3:+9041082 | None:intergenic |
CTTCCTTTCACAACAACCTT+AGG | 0.405006 | 4_3:+9041616 | None:intergenic |
AGTCCAAAGATGACAAGAAA+TGG | 0.406183 | 4_3:-9041950 | Msa0628400:CDS |
TCTTTGGAAGAAGAAGATTC+TGG | 0.408273 | 4_3:-9042630 | Msa0628400:CDS |
GGTTGGTAATTCATCTGTAA+TGG | 0.408994 | 4_3:+9040980 | None:intergenic |
GGCCAGCATCCTGGTGGTAT+GGG | 0.414205 | 4_3:-9039956 | Msa0628400:CDS |
CAGGAATATTCACCCAGTTA+TGG | 0.417573 | 4_3:-9041221 | Msa0628400:CDS |
ATATGAGGAAGAAGAGTATG+AGG | 0.421479 | 4_3:-9042748 | Msa0628400:CDS |
GAGGACATGTTCGAGGAAAC+AGG | 0.423250 | 4_3:-9041720 | Msa0628400:CDS |
ACAAAACAATACAATTCATC+GGG | 0.424815 | 4_3:-9041179 | Msa0628400:CDS |
GCACAGGTAATGGGTGCTGC+TGG | 0.425938 | 4_3:-9040659 | Msa0628400:CDS |
AACTTCCCCACCTTCTTACC+AGG | 0.429647 | 4_3:-9040608 | Msa0628400:intron |
TGCTCCCCAGGGTCCTGGAA+GGG | 0.431029 | 4_3:-9040702 | Msa0628400:CDS |
TGTCTTCAAAGACACTTGTT+TGG | 0.431737 | 4_3:-9038157 | Msa0628400:three_prime_UTR |
GTTGGTAATTCATCTGTAAT+GGG | 0.432266 | 4_3:+9040981 | None:intergenic |
GAGTGAAGATCTTCGTGTTA+GGG | 0.433121 | 4_3:-9042850 | Msa0628400:CDS |
TGAGGAAGAAGAAGAATATG+AGG | 0.435642 | 4_3:-9042763 | Msa0628400:CDS |
TGTATTTAGGCTACCAGTCT+TGG | 0.436020 | 4_3:-9039759 | Msa0628400:intron |
AGAATTCGTGGCACTGGTCG+TGG | 0.437304 | 4_3:-9041742 | Msa0628400:CDS |
GCTGTTGGCATGGCATTCCC+TGG | 0.440100 | 4_3:-9039926 | Msa0628400:CDS |
AGCTGGACCATTCCTTCTGT+TGG | 0.440260 | 4_3:+9041570 | None:intergenic |
AATGTTCATTTGGCACCGCC+TGG | 0.441008 | 4_3:-9041073 | Msa0628400:CDS |
GCACCTCTCCCAGGCCCAGC+AGG | 0.441811 | 4_3:+9041010 | None:intergenic |
AATGGTGCTCCCCAGGGTCC+TGG | 0.443639 | 4_3:-9040707 | Msa0628400:CDS |
TTCATAGGCTTTCCAACAGA+TGG | 0.444016 | 4_3:+9041097 | None:intergenic |
ATGAAGAAGAAGAGGAAAGA+GGG | 0.445157 | 4_3:-9042902 | Msa0628400:CDS |
TCACCATACCTTGCTGTTGA+CGG | 0.450569 | 4_3:-9039701 | Msa0628400:CDS |
TGAAGGTAGCAATCAAAATC+AGG | 0.451354 | 4_3:-9041641 | Msa0628400:CDS |
TGAGGATTAGCAACATATCC+AGG | 0.451553 | 4_3:+9039908 | None:intergenic |
CGAGGGCGTGGTAGAATTCG+TGG | 0.452057 | 4_3:-9041754 | Msa0628400:CDS |
ACTTGAGTATGTGAGGGAAC+AGG | 0.452754 | 4_3:+9040959 | None:intergenic |
ATGCTATCTATGCAGATATT+CGG | 0.452916 | 4_3:-9039249 | Msa0628400:CDS |
CTGAAGTTATTGCAGTTTGA+CGG | 0.455727 | 4_3:-9038833 | Msa0628400:three_prime_UTR |
CCAGCAGTGGGCACAGCAAA+TGG | 0.458085 | 4_3:+9042573 | None:intergenic |
GTCCAAAGATGACAAGAAAT+GGG | 0.459003 | 4_3:-9041949 | Msa0628400:CDS |
ATGGGTGCTGCTGGAAATAT+GGG | 0.460860 | 4_3:-9040650 | Msa0628400:CDS |
CAAATCATTTCAATTAATGT+TGG | 0.467650 | 4_3:-9039274 | Msa0628400:CDS |
CAAATCAACCAACTATTAGT+AGG | 0.468277 | 4_3:+9038290 | None:intergenic |
TTCTGGTGAGGTTAATTTGG+AGG | 0.468724 | 4_3:-9042613 | Msa0628400:CDS |
TCCAAATTGGCAGCACCAGC+AGG | 0.470042 | 4_3:-9041240 | Msa0628400:CDS |
GAACAAAGGGCCTAAGAGTA+AGG | 0.472384 | 4_3:+9039080 | None:intergenic |
GGACCATTCCTTCTGTTGGT+AGG | 0.474490 | 4_3:+9041574 | None:intergenic |
GCATTGGTGGGGAAGGGAAA+TGG | 0.474728 | 4_3:-9040725 | Msa0628400:CDS |
GCAAGCTACTGCCCCACAGA+TGG | 0.475181 | 4_3:-9040864 | Msa0628400:CDS |
ATGAGGAGAAAGGTGAAGGT+GGG | 0.475188 | 4_3:-9042704 | Msa0628400:CDS |
CTTCAAAGACACTTGTTTGG+CGG | 0.476168 | 4_3:-9038154 | Msa0628400:three_prime_UTR |
GGTTGATGGTTCTGTGATTG+TGG | 0.476840 | 4_3:-9042682 | Msa0628400:CDS |
TTTAGGCTACCAGTCTTGGC+TGG | 0.477828 | 4_3:-9039755 | Msa0628400:intron |
CCTGCAGCACCAGCCAAGAC+TGG | 0.478058 | 4_3:+9039746 | None:intergenic |
AACAAAACAATACAATTCAT+CGG | 0.478176 | 4_3:-9041180 | Msa0628400:CDS |
TAGTTTCAAACCTGGTAAGA+AGG | 0.479793 | 4_3:+9040598 | None:intergenic |
AATTTAGAGGAGACCTTCTA+GGG | 0.480298 | 4_3:-9041785 | Msa0628400:intron |
ATCAAAAGCTGGAGAACAAA+GGG | 0.484288 | 4_3:+9039067 | None:intergenic |
GAGGAAGAAGAGTATGAGGA+GGG | 0.484566 | 4_3:-9042744 | Msa0628400:CDS |
GAAGAAGTTTATGAGGAGAA+AGG | 0.484604 | 4_3:-9042714 | Msa0628400:CDS |
TCAATTGCTGAGGTCTGTCC+CGG | 0.485782 | 4_3:+9039662 | None:intergenic |
CCTCGAAAATTACCCCTAGA+AGG | 0.488132 | 4_3:+9041772 | None:intergenic |
CGTCAAACTGCAATAACTTC+AGG | 0.488829 | 4_3:+9038834 | None:intergenic |
AAGGAATGGTCCAGCTCCCC+AGG | 0.490093 | 4_3:-9041563 | Msa0628400:CDS |
CTCCCATACCACCAGGATGC+TGG | 0.490670 | 4_3:+9039954 | None:intergenic |
TGAAGTTATTGCAGTTTGAC+GGG | 0.490817 | 4_3:-9038832 | Msa0628400:three_prime_UTR |
AAGGTCCCCTTCCAGGACCC+TGG | 0.492771 | 4_3:+9040696 | None:intergenic |
TATGTTGCTAATCCTCAGCT+TGG | 0.493673 | 4_3:-9039902 | Msa0628400:CDS |
TTGAAAGGAAGGGATTGAGC+GGG | 0.494305 | 4_3:+9043288 | None:intergenic |
CCAGGTCGATGGCCCATCTG+TGG | 0.494799 | 4_3:+9040851 | None:intergenic |
TGAGGAAGAAGAGTATGAGG+AGG | 0.494933 | 4_3:-9042745 | Msa0628400:CDS |
CCACAGATGGGCCATCGACC+TGG | 0.498881 | 4_3:-9040851 | Msa0628400:CDS |
AGGTCCCCTTCCAGGACCCT+GGG | 0.502918 | 4_3:+9040697 | None:intergenic |
GAGCTGGTAAATGATGAGTA+TGG | 0.506145 | 4_3:-9039375 | Msa0628400:CDS |
CAGGTCGATGGCCCATCTGT+GGG | 0.507031 | 4_3:+9040852 | None:intergenic |
CAATTTGGAGGCCAGCATCC+TGG | 0.508315 | 4_3:-9039965 | Msa0628400:CDS |
TGGTGCTGCAGGAGCTTTAG+GGG | 0.509692 | 4_3:-9039735 | Msa0628400:CDS |
TCTTAGATCTAGGAAATCTC+AGG | 0.512423 | 4_3:-9041440 | Msa0628400:intron |
AAGGTTGTTGTGAAAGGAAG+AGG | 0.513988 | 4_3:-9041613 | Msa0628400:CDS |
TATGAGGAGAAAGGTGAAGG+TGG | 0.514010 | 4_3:-9042705 | Msa0628400:CDS |
TAGTGATGATGAAGAAGAAG+AGG | 0.514285 | 4_3:-9042910 | Msa0628400:CDS |
CAATCAAAATCAGGTGCCTA+AGG | 0.515973 | 4_3:-9041632 | Msa0628400:CDS |
TTGGTAGGTTCATACCTTCG+AGG | 0.516217 | 4_3:+9041589 | None:intergenic |
ATACAGCTTGTCCATGCTGA+TGG | 0.517495 | 4_3:+9041138 | None:intergenic |
TGGGATCTGAAACCCTAGAT+TGG | 0.517744 | 4_3:+9043314 | None:intergenic |
ACTCCTAAATCTCCAATCTA+GGG | 0.521046 | 4_3:-9043326 | Msa0628400:five_prime_UTR |
TGAATAGCCTGCAGTTGTGT+TGG | 0.522283 | 4_3:+9040923 | None:intergenic |
GAAAGGTGCATTGGTGGGGA+AGG | 0.522297 | 4_3:-9040732 | Msa0628400:CDS |
ATGGGCCATCGACCTGGTAG+TGG | 0.523149 | 4_3:-9040845 | Msa0628400:CDS |
AATTGAAGAAATTGAAAGGA+AGG | 0.523409 | 4_3:+9043277 | None:intergenic |
TTCAAACCTGGTAAGAAGGT+GGG | 0.525033 | 4_3:+9040602 | None:intergenic |
TGTTTGAAGTTAAAATAGAG+AGG | 0.525736 | 4_3:+9043381 | None:intergenic |
TAGTCACGAATTGTGAAAAG+AGG | 0.525908 | 4_3:+9043352 | None:intergenic |
GATGCAGTCATGCAATTTGG+AGG | 0.526481 | 4_3:-9039977 | Msa0628400:intron |
CGTGGTAGAATTCGTGGCAC+TGG | 0.527371 | 4_3:-9041748 | Msa0628400:CDS |
ATGGGGACATGATAAATTTG+AGG | 0.528738 | 4_3:-9041931 | Msa0628400:CDS |
TTCTGCATTGGATGATGGTA+TGG | 0.528786 | 4_3:+9041384 | None:intergenic |
GTGCTCCCCAGGGTCCTGGA+AGG | 0.532754 | 4_3:-9040703 | Msa0628400:CDS |
TCAGATTCTGCATTGGATGA+TGG | 0.532807 | 4_3:+9041379 | None:intergenic |
GGGAATGCCATGCCAACAGC+AGG | 0.536272 | 4_3:+9039929 | None:intergenic |
TGCATGGTGGAAGGAGATTG+TGG | 0.536675 | 4_3:-9041974 | Msa0628400:intron |
AAGCTTGTGAGAAACTAGTC+AGG | 0.537115 | 4_3:-9038518 | Msa0628400:three_prime_UTR |
GGGAGTTCCTGCTGTTGGCA+TGG | 0.537333 | 4_3:-9039936 | Msa0628400:CDS |
GTGCCTAAGGTTGTTGTGAA+AGG | 0.537936 | 4_3:-9041619 | Msa0628400:CDS |
CAGTCTGTCCGCCCATCTGT+TGG | 0.538947 | 4_3:-9041109 | Msa0628400:CDS |
CAAGAAACTTTGCATAAAAG+GGG | 0.540607 | 4_3:-9043190 | Msa0628400:five_prime_UTR |
TGTGCCCCACCATAAACAAA+AGG | 0.541688 | 4_3:+9040677 | None:intergenic |
CGGCAAACTTCATATGTTCA+CGG | 0.542060 | 4_3:-9038134 | Msa0628400:three_prime_UTR |
TATTCACCCAGTTATGGATG+AGG | 0.543178 | 4_3:-9041215 | Msa0628400:CDS |
AATAATAGAGAATATAATGA+AGG | 0.543853 | 4_3:-9041658 | Msa0628400:CDS |
GCATGGTGGAAGGAGATTGT+GGG | 0.544643 | 4_3:-9041973 | Msa0628400:intron |
TTTCGCTTTACCTGATTCTG+AGG | 0.544697 | 4_3:+9040751 | None:intergenic |
TGAAGAAGAAGAGGAAAGAG+GGG | 0.545182 | 4_3:-9042901 | Msa0628400:CDS |
GATGAAGAAGAAGAGGAAAG+AGG | 0.549176 | 4_3:-9042903 | Msa0628400:CDS |
TTTATTTACTTGAGTATGTG+AGG | 0.550517 | 4_3:+9040952 | None:intergenic |
TCATAGGCTTTCCAACAGAT+GGG | 0.551593 | 4_3:+9041098 | None:intergenic |
AACTGGGTGAATATTCCTGC+TGG | 0.552361 | 4_3:+9041225 | None:intergenic |
GGTATGGGAGTTCCTGCTGT+TGG | 0.553743 | 4_3:-9039941 | Msa0628400:CDS |
GTTTATGAGGAGAAAGGTGA+AGG | 0.554427 | 4_3:-9042708 | Msa0628400:CDS |
GGAAATATGGGCATCAGTCA+AGG | 0.555036 | 4_3:-9040638 | Msa0628400:CDS |
GCACCGTCAACAGCAAGGTA+TGG | 0.556969 | 4_3:+9039698 | None:intergenic |
TAAAGCGAAAGGTGCATTGG+TGG | 0.558458 | 4_3:-9040738 | Msa0628400:CDS |
AGTTTCTCCAACACAACTGC+AGG | 0.558501 | 4_3:-9040930 | Msa0628400:CDS |
AGCCCGAGGGGTAAAATGGA+GGG | 0.559346 | 4_3:+9041302 | None:intergenic |
AAAGGTGCATTGGTGGGGAA+GGG | 0.559886 | 4_3:-9040731 | Msa0628400:CDS |
GAATGTGGAACAGCATGAGC+AGG | 0.560261 | 4_3:+9038856 | None:intergenic |
ATTGAAGAAATTGAAAGGAA+GGG | 0.560990 | 4_3:+9043278 | None:intergenic |
AAGGGAAATGGTGCTCCCCA+GGG | 0.564353 | 4_3:-9040713 | Msa0628400:CDS |
TGAGGAGAAAGGTGAAGGTG+GGG | 0.564685 | 4_3:-9042703 | Msa0628400:CDS |
AATAAACCTCGCAGGCAAGT+TGG | 0.565063 | 4_3:-9039342 | Msa0628400:CDS |
CACAGGGTCAGATTCTGCAT+TGG | 0.566976 | 4_3:+9041372 | None:intergenic |
CTGCAATAACTTCAGGAATG+TGG | 0.567233 | 4_3:+9038841 | None:intergenic |
TGAAGATGATGAGGAAATTG+AGG | 0.568096 | 4_3:-9042781 | Msa0628400:CDS |
AGAATCTTCTTCTTCCAAAG+AGG | 0.568259 | 4_3:+9042632 | None:intergenic |
CAAGCTACTGCCCCACAGAT+GGG | 0.568630 | 4_3:-9040863 | Msa0628400:CDS |
ATTCACCCAGTTATGGATGA+GGG | 0.569904 | 4_3:-9041214 | Msa0628400:CDS |
AAAGCGAAAGGTGCATTGGT+GGG | 0.572392 | 4_3:-9040737 | Msa0628400:CDS |
TGATATGGCTAATTCTGTTG+CGG | 0.572619 | 4_3:-9043006 | Msa0628400:exon |
ACATGGACACCAGAAGATCC+AGG | 0.575140 | 4_3:+9041055 | None:intergenic |
TGCAAGCCAACTTGCCTGCG+AGG | 0.575451 | 4_3:+9039336 | None:intergenic |
ATTCAGAGAAGTTCTGCACC+AGG | 0.576778 | 4_3:-9040905 | Msa0628400:CDS |
GAATCTTCTTCTTCCAAAGA+GGG | 0.578294 | 4_3:+9042633 | None:intergenic |
GAGCCCGAGGGGTAAAATGG+AGG | 0.578382 | 4_3:+9041301 | None:intergenic |
AAGTGCTCCAGATCAAAAGC+TGG | 0.579144 | 4_3:+9039056 | None:intergenic |
GGGATCGGTGCACCTCTCCC+AGG | 0.579608 | 4_3:+9041001 | None:intergenic |
TTTCAAACCTGGTAAGAAGG+TGG | 0.580435 | 4_3:+9040601 | None:intergenic |
CCCTAATTGAAGAAATTGAA+AGG | 0.580436 | 4_3:+9043273 | None:intergenic |
GAAGATTGAGATCCACTACC+AGG | 0.582276 | 4_3:+9040833 | None:intergenic |
CCTTGAATTATCAATTGCTG+AGG | 0.582948 | 4_3:+9039652 | None:intergenic |
GGTGCTTACGGTCGTCAACC+GGG | 0.584192 | 4_3:-9039680 | Msa0628400:CDS |
GCAAGATAGGCGCTATGATG+AGG | 0.586479 | 4_3:-9041898 | Msa0628400:intron |
GAACCTACCAACAGAAGGAA+TGG | 0.588056 | 4_3:-9041577 | Msa0628400:CDS |
GATCAAAAGCTGGAGAACAA+AGG | 0.591172 | 4_3:+9039066 | None:intergenic |
TGTTGTTGATTCCATCAGCA+TGG | 0.593595 | 4_3:-9041149 | Msa0628400:CDS |
TGAAAGGAAGGGATTGAGCG+GGG | 0.595019 | 4_3:+9043289 | None:intergenic |
TGAAAGGAAGAGGGCCTCGA+AGG | 0.597013 | 4_3:-9041603 | Msa0628400:CDS |
TCAAACCTGGTAAGAAGGTG+GGG | 0.597725 | 4_3:+9040603 | None:intergenic |
GGTCGTGGAGGACATGTTCG+AGG | 0.600116 | 4_3:-9041727 | Msa0628400:CDS |
TTATTTACTTGAGTATGTGA+GGG | 0.601489 | 4_3:+9040953 | None:intergenic |
TAATTCATCTGTAATGGGAT+CGG | 0.602971 | 4_3:+9040986 | None:intergenic |
AGGTAAAGCGAAAGGTGCAT+TGG | 0.605252 | 4_3:-9040741 | Msa0628400:CDS |
TAGTTGCTTGTTTAATTGTG+CGG | 0.607173 | 4_3:-9038806 | Msa0628400:intron |
CGTAAGCACCGTCAACAGCA+AGG | 0.607755 | 4_3:+9039693 | None:intergenic |
GAGATCCACTACCAGGTCGA+TGG | 0.608351 | 4_3:+9040840 | None:intergenic |
GCCCGAGGGGTAAAATGGAG+GGG | 0.608422 | 4_3:+9041303 | None:intergenic |
AGTAGGAATATCAAGAAGCA+CGG | 0.609070 | 4_3:+9038307 | None:intergenic |
CATGTAAAAGGCACCAGCAG+TGG | 0.613039 | 4_3:+9042560 | None:intergenic |
TGAAGCAGCTGATTGCATCA+TGG | 0.614596 | 4_3:-9038450 | Msa0628400:three_prime_UTR |
ATTGAAAGGAAGGGATTGAG+CGG | 0.614782 | 4_3:+9043287 | None:intergenic |
ATGTAAAAGGCACCAGCAGT+GGG | 0.616487 | 4_3:+9042561 | None:intergenic |
GTTCGTTCTGATGATTCAGA+AGG | 0.616861 | 4_3:-9042828 | Msa0628400:CDS |
AAAATAACTACATGGAACAA+AGG | 0.618150 | 4_3:+9038397 | None:intergenic |
TCTTACAATGCGGAGACGCG+AGG | 0.618929 | 4_3:-9042934 | Msa0628400:CDS |
TTCTTTGTTAGAAGAGCCCG+AGG | 0.620299 | 4_3:+9041288 | None:intergenic |
ACAATTCTAATGCCCGCCAA+AGG | 0.620322 | 4_3:-9042518 | Msa0628400:intron |
TCAGAATCAGGTAAAGCGAA+AGG | 0.623545 | 4_3:-9040749 | Msa0628400:CDS |
AACGACAGAATAAACCTCGC+AGG | 0.625383 | 4_3:-9039350 | Msa0628400:CDS |
GGTATGAACCTACCAACAGA+AGG | 0.632725 | 4_3:-9041582 | Msa0628400:CDS |
GGAAGAAGAAGATTCTGGTG+AGG | 0.633912 | 4_3:-9042625 | Msa0628400:CDS |
AGGTCGATGGCCCATCTGTG+GGG | 0.635661 | 4_3:+9040853 | None:intergenic |
ACAGACGTTAAAGTCCGCCC+TGG | 0.638306 | 4_3:+9040887 | None:intergenic |
GAAAACCCTCATCCATAACT+GGG | 0.641507 | 4_3:+9041209 | None:intergenic |
TCTGATGATTCAGAAGGTGA+AGG | 0.642032 | 4_3:-9042822 | Msa0628400:CDS |
GAGGATTAGCAACATATCCA+GGG | 0.645143 | 4_3:+9039909 | None:intergenic |
AAGCGAAAGGTGCATTGGTG+GGG | 0.647056 | 4_3:-9040736 | Msa0628400:CDS |
GAAAAGGAGATTGAGAAACA+TGG | 0.648323 | 4_3:+9041038 | None:intergenic |
TTACGAGAGTGATCCTGAAG+AGG | 0.648401 | 4_3:-9042970 | Msa0628400:CDS |
TAGGCTTTCCAACAGATGGG+CGG | 0.654630 | 4_3:+9041101 | None:intergenic |
AGGTTGTTGTGAAAGGAAGA+GGG | 0.655613 | 4_3:-9041612 | Msa0628400:CDS |
CATTAGAATTGTCCCTAAAG+CGG | 0.656229 | 4_3:+9042529 | None:intergenic |
TGGGAAAATCAGAAATGACA+TGG | 0.656948 | 4_3:-9039877 | Msa0628400:intron |
TGATTCTGGAGAAACAGATG+TGG | 0.659001 | 4_3:-9040774 | Msa0628400:CDS |
GCAGGAACTCCCATACCACC+AGG | 0.661642 | 4_3:+9039947 | None:intergenic |
GTGGTTAAGGAATCTGATGG+TGG | 0.666005 | 4_3:-9042663 | Msa0628400:CDS |
TAAGGAATCTGATGGTGGTG+TGG | 0.667047 | 4_3:-9042658 | Msa0628400:CDS |
TGATTATGATGAAGATGATG+AGG | 0.669501 | 4_3:-9042790 | Msa0628400:CDS |
GGTCCCCTTCCAGGACCCTG+GGG | 0.675246 | 4_3:+9040698 | None:intergenic |
ATTCGTGGCACTGGTCGTGG+AGG | 0.678406 | 4_3:-9041739 | Msa0628400:CDS |
TTCAGAGAAGTTCTGCACCA+GGG | 0.679725 | 4_3:-9040904 | Msa0628400:CDS |
TCCAAAGATGACAAGAAATG+GGG | 0.681978 | 4_3:-9041948 | Msa0628400:CDS |
CTTTGTTAGAAGAGCCCGAG+GGG | 0.684062 | 4_3:+9041290 | None:intergenic |
TGAGAAATATGCAATCATGA+CGG | 0.686101 | 4_3:+9039295 | None:intergenic |
AGTTATTGCAGTTTGACGGG+TGG | 0.690946 | 4_3:-9038829 | Msa0628400:three_prime_UTR |
TTTGGAGGCCAGCATCCTGG+TGG | 0.702152 | 4_3:-9039962 | Msa0628400:CDS |
GATGATTCAGAAGGTGAAGG+TGG | 0.703579 | 4_3:-9042819 | Msa0628400:CDS |
TCTTTGTTAGAAGAGCCCGA+GGG | 0.712689 | 4_3:+9041289 | None:intergenic |
GAGTATGTGAGGGAACAGGT+TGG | 0.720166 | 4_3:+9040963 | None:intergenic |
ATTGTGGTTAAGGAATCTGA+TGG | 0.721815 | 4_3:-9042666 | Msa0628400:CDS |
AAAGATCGCTTCTTACAATG+CGG | 0.727017 | 4_3:-9042944 | Msa0628400:CDS |
AGAGAAGTTCTGCACCAGGG+CGG | 0.738316 | 4_3:-9040901 | Msa0628400:CDS |
CAAAACAATACAATTCATCG+GGG | 0.743574 | 4_3:-9041178 | Msa0628400:CDS |
ATTTAGAGGAGACCTTCTAG+GGG | 0.744328 | 4_3:-9041784 | Msa0628400:intron |
TGGACACCAGAAGATCCAGG+CGG | 0.814508 | 4_3:+9041058 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATACAAGAAATATATT+TGG | + | chr4_3:9039083-9039102 | None:intergenic | 10.0% |
!!! | TGATTTTTCTATTTTTAATT+TGG | - | chr4_3:9041546-9041565 | Msa0628400:intron | 10.0% |
!!! | TTTGAATTTTTATCGTTTTA+CGG | - | chr4_3:9038425-9038444 | Msa0628400:three_prime_UTR | 15.0% |
!! | AATAATAGAGAATATAATGA+AGG | - | chr4_3:9039891-9039910 | Msa0628400:CDS | 15.0% |
!! | ATTGTATACCTATATTATTA+GGG | - | chr4_3:9041209-9041228 | Msa0628400:CDS | 15.0% |
!! | ATTATTAATAGCATTTATGT+TGG | - | chr4_3:9041264-9041283 | Msa0628400:CDS | 15.0% |
!! | ATTTATATTAATATCGTCTT+GGG | - | chr4_3:9041496-9041515 | Msa0628400:intron | 15.0% |
!!! | TTTTCTATTTTTAATTTGGT+TGG | - | chr4_3:9041550-9041569 | Msa0628400:CDS | 15.0% |
!! | AAGAATAATTATGAAAATAG+AGG | - | chr4_3:9042767-9042786 | Msa0628400:CDS | 15.0% |
!! | TGGAAAAAAAAAATGTTAAA+TGG | + | chr4_3:9042799-9042818 | None:intergenic | 15.0% |
!! | TTACATGAGAAAAATTTAAA+TGG | - | chr4_3:9043302-9043321 | Msa0628400:five_prime_UTR | 15.0% |
!!! | TGTTTTGTATGTATGTATTA+CGG | - | chr4_3:9039161-9039180 | Msa0628400:intron | 20.0% |
!! | AACAAAACAATACAATTCAT+CGG | - | chr4_3:9040369-9040388 | Msa0628400:intron | 20.0% |
!! | AAACTAAATTGCAAAAGTTA+AGG | - | chr4_3:9040968-9040987 | Msa0628400:CDS | 20.0% |
!! | GATTGTATACCTATATTATT+AGG | - | chr4_3:9041208-9041227 | Msa0628400:CDS | 20.0% |
!! | GTAAATAACCCTAATAATAT+AGG | + | chr4_3:9041220-9041239 | None:intergenic | 20.0% |
!! | GATTTATATTAATATCGTCT+TGG | - | chr4_3:9041495-9041514 | Msa0628400:intron | 20.0% |
!! | CATATTTAATACTATAAGAC+TGG | + | chr4_3:9041928-9041947 | None:intergenic | 20.0% |
!!! | TATATTTTACCAGTTTTTTG+TGG | + | chr4_3:9042081-9042100 | None:intergenic | 20.0% |
!! | CAAATCATTTCAATTAATGT+TGG | - | chr4_3:9042275-9042294 | Msa0628400:intron | 20.0% |
!!! | TATTTGAAATAAGCAGATAA+AGG | - | chr4_3:9042364-9042383 | Msa0628400:intron | 20.0% |
!! | AATAAATTTCAAGACTTTCT+AGG | - | chr4_3:9042524-9042543 | Msa0628400:CDS | 20.0% |
!!! | ATTGCAACATTTTTGTAAAA+AGG | + | chr4_3:9042596-9042615 | None:intergenic | 20.0% |
!! | TTTATTGAATTTCAACCAAT+AGG | + | chr4_3:9042831-9042850 | None:intergenic | 20.0% |
!! | TGAAATAACACAATTTATTG+TGG | - | chr4_3:9042969-9042988 | Msa0628400:CDS | 20.0% |
!!! | ACAAAATTTTCTCATGTAAA+TGG | - | chr4_3:9043126-9043145 | Msa0628400:five_prime_UTR | 20.0% |
!! | TTCAGATAAAAATAACTACA+TGG | + | chr4_3:9043163-9043182 | None:intergenic | 20.0% |
!!! | AAAATTTTCACCTTTATTGT+TGG | - | chr4_3:9043196-9043215 | Msa0628400:five_prime_UTR | 20.0% |
!!! | AAATTTTCACCTTTATTGTT+GGG | - | chr4_3:9043197-9043216 | Msa0628400:five_prime_UTR | 20.0% |
!!! | GTAATTATCTGATTTTGGAA+GGG | + | chr4_3:9038136-9038155 | None:intergenic | 25.0% |
!! | AGAAGGTAATTATCTGATTT+TGG | + | chr4_3:9038141-9038160 | None:intergenic | 25.0% |
!! | TGTTTGAAGTTAAAATAGAG+AGG | + | chr4_3:9038171-9038190 | None:intergenic | 25.0% |
! | ATTGAAGAAATTGAAAGGAA+GGG | + | chr4_3:9038274-9038293 | None:intergenic | 25.0% |
! | AATTGAAGAAATTGAAAGGA+AGG | + | chr4_3:9038275-9038294 | None:intergenic | 25.0% |
! | TCCTTTCAATTTCTTCAATT+AGG | - | chr4_3:9038275-9038294 | Msa0628400:three_prime_UTR | 25.0% |
! | CCTTTCAATTTCTTCAATTA+GGG | - | chr4_3:9038276-9038295 | Msa0628400:three_prime_UTR | 25.0% |
! | AATGAGATAGATTGTGAAAA+TGG | + | chr4_3:9038304-9038323 | None:intergenic | 25.0% |
! | TTCAAGAAACTTTGCATAAA+AGG | - | chr4_3:9038357-9038376 | Msa0628400:three_prime_UTR | 25.0% |
! | TCAAGAAACTTTGCATAAAA+GGG | - | chr4_3:9038358-9038377 | Msa0628400:three_prime_UTR | 25.0% |
!!! | ATTCGTGGATTAATTTTTTG+TGG | - | chr4_3:9038462-9038481 | Msa0628400:three_prime_UTR | 25.0% |
!!! | TTCGTGGATTAATTTTTTGT+GGG | - | chr4_3:9038463-9038482 | Msa0628400:three_prime_UTR | 25.0% |
!!! | TTTTTGGTTCTTGAATTTCT+AGG | - | chr4_3:9038504-9038523 | Msa0628400:three_prime_UTR | 25.0% |
!!! | TTGAATTTCTAGGTTTTTTC+TGG | - | chr4_3:9038514-9038533 | Msa0628400:three_prime_UTR | 25.0% |
!!! | TGAATTTCTAGGTTTTTTCT+GGG | - | chr4_3:9038515-9038534 | Msa0628400:three_prime_UTR | 25.0% |
!! | TATTTAGTGTTAGTTTGACT+TGG | - | chr4_3:9039098-9039117 | Msa0628400:intron | 25.0% |
!!! | TTGTAGCTTAGTTTTAGATT+TGG | - | chr4_3:9039125-9039144 | Msa0628400:intron | 25.0% |
! | AAACTAAACTACAATATTCC+AGG | + | chr4_3:9039347-9039366 | None:intergenic | 25.0% |
!!! | TTTTTTGTTCTCTTAGATCT+AGG | - | chr4_3:9040099-9040118 | Msa0628400:intron | 25.0% |
! | AAATTAATCTGCCACAAAAA+CGG | - | chr4_3:9040282-9040301 | Msa0628400:intron | 25.0% |
!!! | ATTGTATTGTTTTGTTGAAC+CGG | + | chr4_3:9040365-9040384 | None:intergenic | 25.0% |
! | ACAAAACAATACAATTCATC+GGG | - | chr4_3:9040370-9040389 | Msa0628400:intron | 25.0% |
! | TTATTTACTTGAGTATGTGA+GGG | + | chr4_3:9040599-9040618 | None:intergenic | 25.0% |
! | TTTATTTACTTGAGTATGTG+AGG | + | chr4_3:9040600-9040619 | None:intergenic | 25.0% |
!! | TTAATTGATGCAGATCTTTT+TGG | + | chr4_3:9040749-9040768 | None:intergenic | 25.0% |
! | TCAATTAATTCACTTGATTC+TGG | - | chr4_3:9040761-9040780 | Msa0628400:CDS | 25.0% |
!! | TGCAAAAGTTAAGGAAATTT+TGG | - | chr4_3:9040977-9040996 | Msa0628400:CDS | 25.0% |
!! | TAATATTACATGATTTTCGC+AGG | + | chr4_3:9041092-9041111 | None:intergenic | 25.0% |
! | TATAATCTTCCATAATGCAT+TGG | + | chr4_3:9041304-9041323 | None:intergenic | 25.0% |
!! | CTTTGAAAGAAAGAAAATTC+AGG | + | chr4_3:9041397-9041416 | None:intergenic | 25.0% |
!! | TTTTCTTTCTTTCAAAGTAC+AGG | - | chr4_3:9041400-9041419 | Msa0628400:CDS | 25.0% |
! | TAATATAAATCAGAACCGTA+GGG | + | chr4_3:9041486-9041505 | None:intergenic | 25.0% |
! | TTAATATAAATCAGAACCGT+AGG | + | chr4_3:9041487-9041506 | None:intergenic | 25.0% |
!! | TTTGGAGTGATGAAAATTTA+AGG | + | chr4_3:9041752-9041771 | None:intergenic | 25.0% |
!! | TTGTTGCATTTTCTGATATT+TGG | - | chr4_3:9042429-9042448 | Msa0628400:intron | 25.0% |
!!! | ATTTGGTAATTTTGTTATGC+AGG | - | chr4_3:9042446-9042465 | Msa0628400:intron | 25.0% |
!! | AATAAAGTCTTTATTTCGAG+TGG | - | chr4_3:9042845-9042864 | Msa0628400:CDS | 25.0% |
!! | ATAAAGTCTTTATTTCGAGT+GGG | - | chr4_3:9042846-9042865 | Msa0628400:CDS | 25.0% |
! | TTCAAAAGATCAATCCATTA+GGG | + | chr4_3:9042953-9042972 | None:intergenic | 25.0% |
! | TTTCAAAAGATCAATCCATT+AGG | + | chr4_3:9042954-9042973 | None:intergenic | 25.0% |
!! | AATTTATTGTGGTTCTTTTC+AGG | - | chr4_3:9042980-9042999 | Msa0628400:CDS | 25.0% |
! | AAAATAACTACATGGAACAA+AGG | + | chr4_3:9043155-9043174 | None:intergenic | 25.0% |
! | AAAACAATACCCAACAATAA+AGG | + | chr4_3:9043209-9043228 | None:intergenic | 25.0% |
! | TTGATATTCCTACTAATAGT+TGG | - | chr4_3:9043251-9043270 | Msa0628400:five_prime_UTR | 25.0% |
! | CTTCTTGAATTCAGTTAATT+TGG | - | chr4_3:9043333-9043352 | Msa0628400:five_prime_UTR | 25.0% |
!! | ATTCAGTTAATTTGGATGAA+TGG | - | chr4_3:9043341-9043360 | Msa0628400:five_prime_UTR | 25.0% |
!! | TGATTTTGGAAGGGTAATTT+CGG | + | chr4_3:9038127-9038146 | None:intergenic | 30.0% |
! | GGTAATTATCTGATTTTGGA+AGG | + | chr4_3:9038137-9038156 | None:intergenic | 30.0% |
CCCTAATTGAAGAAATTGAA+AGG | + | chr4_3:9038279-9038298 | None:intergenic | 30.0% | |
TTTCTTGAATCGATTGAAGT+TGG | + | chr4_3:9038346-9038365 | None:intergenic | 30.0% | |
CAAGAAACTTTGCATAAAAG+GGG | - | chr4_3:9038359-9038378 | Msa0628400:three_prime_UTR | 30.0% | |
! | TTTTTATCGTTTTACGGTTC+TGG | - | chr4_3:9038431-9038450 | Msa0628400:three_prime_UTR | 30.0% |
! | TTTTATCGTTTTACGGTTCT+GGG | - | chr4_3:9038432-9038451 | Msa0628400:three_prime_UTR | 30.0% |
!!! | TCGTGGATTAATTTTTTGTG+GGG | - | chr4_3:9038464-9038483 | Msa0628400:three_prime_UTR | 30.0% |
!!! | TCTTGTTTTTTGGGGTTTTT+TGG | - | chr4_3:9038488-9038507 | Msa0628400:three_prime_UTR | 30.0% |
!!! | GAATTTCTAGGTTTTTTCTG+GGG | - | chr4_3:9038516-9038535 | Msa0628400:three_prime_UTR | 30.0% |
!!! | TTTTTCTGGGGTTTTTGATA+TGG | - | chr4_3:9038528-9038547 | Msa0628400:three_prime_UTR | 30.0% |
TGATTATGATGAAGATGATG+AGG | - | chr4_3:9038759-9038778 | Msa0628400:intron | 30.0% | |
AGTTGAAGAAGAAGTTTATG+AGG | - | chr4_3:9038828-9038847 | Msa0628400:three_prime_UTR | 30.0% | |
CATGATGAAAAAGATACCTT+TGG | + | chr4_3:9039050-9039069 | None:intergenic | 30.0% | |
CATATACAAAGCAACCTATT+TGG | + | chr4_3:9039304-9039323 | None:intergenic | 30.0% | |
CATTGACACTAATAATTGGA+TGG | + | chr4_3:9039472-9039491 | None:intergenic | 30.0% | |
!! | TTTTAACTCCGACTTTTCAA+AGG | - | chr4_3:9039548-9039567 | Msa0628400:intron | 30.0% |
GTTGTGTGTATGAAATTTAG+AGG | - | chr4_3:9039751-9039770 | Msa0628400:CDS | 30.0% | |
!!! | TTACTGTTTATTTTGCACCT+GGG | + | chr4_3:9040006-9040025 | None:intergenic | 30.0% |
AATTAATCTGCCACAAAAAC+GGG | - | chr4_3:9040283-9040302 | Msa0628400:intron | 30.0% | |
CAAAACAATACAATTCATCG+GGG | - | chr4_3:9040371-9040390 | Msa0628400:intron | 30.0% | |
! | TAATTCATCTGTAATGGGAT+CGG | + | chr4_3:9040566-9040585 | None:intergenic | 30.0% |
!! | GTTGGTAATTCATCTGTAAT+GGG | + | chr4_3:9040571-9040590 | None:intergenic | 30.0% |
! | TTGCAATTTAGTTTCAAACC+TGG | + | chr4_3:9040962-9040981 | None:intergenic | 30.0% |
! | TCGAATACTTTGTTTGATCT+TGG | - | chr4_3:9041140-9041159 | Msa0628400:CDS | 30.0% |
GAGTGAGAATGTTAGTATTA+GGG | - | chr4_3:9041162-9041181 | Msa0628400:CDS | 30.0% | |
AGGTATACAATCTTAGAGTT+TGG | + | chr4_3:9041200-9041219 | None:intergenic | 30.0% | |
!!! | ATTTTAACTTAACGAAGACG+TGG | - | chr4_3:9041323-9041342 | Msa0628400:CDS | 30.0% |
! | AAGACGTGGATAATAGTTTT+TGG | - | chr4_3:9041337-9041356 | Msa0628400:CDS | 30.0% |
! | AGACGTGGATAATAGTTTTT+GGG | - | chr4_3:9041338-9041357 | Msa0628400:CDS | 30.0% |
!!! | TGGATAATAGTTTTTGGGTT+TGG | - | chr4_3:9041343-9041362 | Msa0628400:CDS | 30.0% |
TTGGGTTTGGATAATATACT+TGG | - | chr4_3:9041356-9041375 | Msa0628400:CDS | 30.0% | |
TGGGTTTGGATAATATACTT+GGG | - | chr4_3:9041357-9041376 | Msa0628400:CDS | 30.0% | |
AAAATCAATTGCAAGCGTAA+AGG | + | chr4_3:9041533-9041552 | None:intergenic | 30.0% | |
TAATTACCTCGTCTGTATTT+AGG | - | chr4_3:9041777-9041796 | Msa0628400:CDS | 30.0% | |
! | ATTTTACCAGTTTTTTGTGG+TGG | + | chr4_3:9042078-9042097 | None:intergenic | 30.0% |
CAAAAGGTGAAACTATCAAA+GGG | + | chr4_3:9042111-9042130 | None:intergenic | 30.0% | |
TCAAAAGGTGAAACTATCAA+AGG | + | chr4_3:9042112-9042131 | None:intergenic | 30.0% | |
!!! | ATAGTTTCACCTTTTGACTT+TGG | - | chr4_3:9042115-9042134 | Msa0628400:intron | 30.0% |
TGAGAAATATGCAATCATGA+CGG | + | chr4_3:9042257-9042276 | None:intergenic | 30.0% | |
ATGCTATCTATGCAGATATT+CGG | - | chr4_3:9042300-9042319 | Msa0628400:intron | 30.0% | |
! | AGATATTCGGAGATGAATTT+TGG | - | chr4_3:9042313-9042332 | Msa0628400:intron | 30.0% |
CATAGAACTAGTTGTTAGTT+TGG | + | chr4_3:9042400-9042419 | None:intergenic | 30.0% | |
! | AATGTTGCAATGATTTTGCT+TGG | - | chr4_3:9042605-9042624 | Msa0628400:CDS | 30.0% |
TAGTTGCTTGTTTAATTGTG+CGG | - | chr4_3:9042743-9042762 | Msa0628400:CDS | 30.0% | |
TTGAATTTCAACCAATAGGA+GGG | + | chr4_3:9042827-9042846 | None:intergenic | 30.0% | |
ATTGAATTTCAACCAATAGG+AGG | + | chr4_3:9042828-9042847 | None:intergenic | 30.0% | |
! | TTTACCGGTTGAAATTCATA+TGG | + | chr4_3:9042874-9042893 | None:intergenic | 30.0% |
! | ATATCTGTTACTTACCCTAA+TGG | - | chr4_3:9042936-9042955 | Msa0628400:CDS | 30.0% |
CAAATCAACCAACTATTAGT+AGG | + | chr4_3:9043262-9043281 | None:intergenic | 30.0% | |
AATAGAGAGGATTACGTAGA+AGG | + | chr4_3:9038158-9038177 | None:intergenic | 35.0% | |
TAGTCACGAATTGTGAAAAG+AGG | + | chr4_3:9038200-9038219 | None:intergenic | 35.0% | |
ACTCCTAAATCTCCAATCTA+GGG | - | chr4_3:9038223-9038242 | Msa0628400:three_prime_UTR | 35.0% | |
AAACCCTAGATTGGAGATTT+AGG | + | chr4_3:9038229-9038248 | None:intergenic | 35.0% | |
!!! | TTTGTGGGGTTCTTGTTTTT+TGG | - | chr4_3:9038478-9038497 | Msa0628400:three_prime_UTR | 35.0% |
!!! | TTGTGGGGTTCTTGTTTTTT+GGG | - | chr4_3:9038479-9038498 | Msa0628400:three_prime_UTR | 35.0% |
TGATATGGCTAATTCTGTTG+CGG | - | chr4_3:9038543-9038562 | Msa0628400:three_prime_UTR | 35.0% | |
AAAGATCGCTTCTTACAATG+CGG | - | chr4_3:9038605-9038624 | Msa0628400:intron | 35.0% | |
! | TAGTGATGATGAAGAAGAAG+AGG | - | chr4_3:9038639-9038658 | Msa0628400:intron | 35.0% |
ATGAAGAAGAAGAGGAAAGA+GGG | - | chr4_3:9038647-9038666 | Msa0628400:intron | 35.0% | |
TGAAGATGATGAGGAAATTG+AGG | - | chr4_3:9038768-9038787 | Msa0628400:intron | 35.0% | |
TGAGGAAGAAGAAGAATATG+AGG | - | chr4_3:9038786-9038805 | Msa0628400:intron | 35.0% | |
! | ATATGAGGAAGAAGAGTATG+AGG | - | chr4_3:9038801-9038820 | Msa0628400:intron | 35.0% |
GAAGAAGTTTATGAGGAGAA+AGG | - | chr4_3:9038835-9038854 | Msa0628400:three_prime_UTR | 35.0% | |
ATTGTGGTTAAGGAATCTGA+TGG | - | chr4_3:9038883-9038902 | Msa0628400:intron | 35.0% | |
GAATCTTCTTCTTCCAAAGA+GGG | + | chr4_3:9038919-9038938 | None:intergenic | 35.0% | |
AGAATCTTCTTCTTCCAAAG+AGG | + | chr4_3:9038920-9038939 | None:intergenic | 35.0% | |
! | TCTTTGGAAGAAGAAGATTC+TGG | - | chr4_3:9038919-9038938 | Msa0628400:intron | 35.0% |
AGATTCTGGTGAGGTTAATT+TGG | - | chr4_3:9038933-9038952 | Msa0628400:intron | 35.0% | |
! | GGTTAATTTGGAGGAGAAAA+AGG | - | chr4_3:9038945-9038964 | Msa0628400:intron | 35.0% |
CATTAGAATTGTCCCTAAAG+CGG | + | chr4_3:9039023-9039042 | None:intergenic | 35.0% | |
ATGAAAAAGATACCTTTGGC+GGG | + | chr4_3:9039046-9039065 | None:intergenic | 35.0% | |
GATGAAAAAGATACCTTTGG+CGG | + | chr4_3:9039047-9039066 | None:intergenic | 35.0% | |
TTACGGATACTTTAGATCGA+AGG | - | chr4_3:9039178-9039197 | Msa0628400:intron | 35.0% | |
!! | CATGTTGCTTTGTACCAAAT+AGG | - | chr4_3:9039066-9039085 | Msa0628400:three_prime_UTR | 35.0% |
!! | TGTTTAGTGTTACTTTGACC+TGG | - | chr4_3:9039326-9039345 | Msa0628400:CDS | 35.0% |
!!! | TGTCATAGAGTGTGTTGTTT+TGG | - | chr4_3:9039372-9039391 | Msa0628400:CDS | 35.0% |
! | CACGCATTGACACTAATAAT+TGG | + | chr4_3:9039476-9039495 | None:intergenic | 35.0% |
AGTCCAAAGATGACAAGAAA+TGG | - | chr4_3:9039599-9039618 | Msa0628400:intron | 35.0% | |
GTCCAAAGATGACAAGAAAT+GGG | - | chr4_3:9039600-9039619 | Msa0628400:intron | 35.0% | |
TCCAAAGATGACAAGAAATG+GGG | - | chr4_3:9039601-9039620 | Msa0628400:intron | 35.0% | |
ATGGGGACATGATAAATTTG+AGG | - | chr4_3:9039618-9039637 | Msa0628400:intron | 35.0% | |
AGGAAATTTCAGTGCAAGAT+AGG | - | chr4_3:9039638-9039657 | Msa0628400:intron | 35.0% | |
AAATTTAGAGGAGACCTTCT+AGG | - | chr4_3:9039763-9039782 | Msa0628400:intron | 35.0% | |
AATTTAGAGGAGACCTTCTA+GGG | - | chr4_3:9039764-9039783 | Msa0628400:intron | 35.0% | |
TGAAGGTAGCAATCAAAATC+AGG | - | chr4_3:9039908-9039927 | Msa0628400:CDS | 35.0% | |
!!! | TACTGTTTATTTTGCACCTG+GGG | + | chr4_3:9040005-9040024 | None:intergenic | 35.0% |
!!! | CTTACTGTTTATTTTGCACC+TGG | + | chr4_3:9040007-9040026 | None:intergenic | 35.0% |
ACATGATCACTATCATGTTG+AGG | - | chr4_3:9040058-9040077 | Msa0628400:intron | 35.0% | |
TCTTAGATCTAGGAAATCTC+AGG | - | chr4_3:9040109-9040128 | Msa0628400:intron | 35.0% | |
! | ACATGTGAAGTTTTCTTAGC+AGG | + | chr4_3:9040203-9040222 | None:intergenic | 35.0% |
GCCTATGAACAATGTTCATT+TGG | - | chr4_3:9040466-9040485 | Msa0628400:intron | 35.0% | |
GCCAAATGAACATTGTTCAT+AGG | + | chr4_3:9040470-9040489 | None:intergenic | 35.0% | |
GAAAAGGAGATTGAGAAACA+TGG | + | chr4_3:9040514-9040533 | None:intergenic | 35.0% | |
!! | GGTTGGTAATTCATCTGTAA+TGG | + | chr4_3:9040572-9040591 | None:intergenic | 35.0% |
! | ATTGATGCAGATCTTTTTGG+TGG | + | chr4_3:9040746-9040765 | None:intergenic | 35.0% |
TAGTTTCAAACCTGGTAAGA+AGG | + | chr4_3:9040954-9040973 | None:intergenic | 35.0% | |
GGAGTGAGAATGTTAGTATT+AGG | - | chr4_3:9041161-9041180 | Msa0628400:CDS | 35.0% | |
TCTGTCAAACCAATGCATTA+TGG | - | chr4_3:9041292-9041311 | Msa0628400:CDS | 35.0% | |
GGGTTTGGATAATATACTTG+GGG | - | chr4_3:9041358-9041377 | Msa0628400:CDS | 35.0% | |
TGGATAATATACTTGGGGTT+AGG | - | chr4_3:9041363-9041382 | Msa0628400:CDS | 35.0% | |
TCTTTCTTTCAAAGTACAGG+AGG | - | chr4_3:9041403-9041422 | Msa0628400:CDS | 35.0% | |
TATTGTCATCTTTAGCCCTA+CGG | - | chr4_3:9041468-9041487 | Msa0628400:intron | 35.0% | |
TGGGAAAATCAGAAATGACA+TGG | - | chr4_3:9041672-9041691 | Msa0628400:CDS | 35.0% | |
GACGAGGTAATTACTAAGTT+TGG | + | chr4_3:9041770-9041789 | None:intergenic | 35.0% | |
CCTTGAATTATCAATTGCTG+AGG | + | chr4_3:9041900-9041919 | None:intergenic | 35.0% | |
! | CCTCAGCAATTGATAATTCA+AGG | - | chr4_3:9041897-9041916 | Msa0628400:intron | 35.0% |
CTGCAATATCGCAAATGAAA+TGG | + | chr4_3:9041961-9041980 | None:intergenic | 35.0% | |
CTGATGTAACCAAAGTCAAA+AGG | + | chr4_3:9042127-9042146 | None:intergenic | 35.0% | |
!! | CTTTTATTTGTCTGTAGAGC+TGG | - | chr4_3:9042158-9042177 | Msa0628400:intron | 35.0% |
!! | TGGTCAGTGAGGTTTTATAT+AGG | - | chr4_3:9042333-9042352 | Msa0628400:intron | 35.0% |
ATCAAAAGCTGGAGAACAAA+GGG | + | chr4_3:9042485-9042504 | None:intergenic | 35.0% | |
ATTATGGAAGGGAAAGAAAG+GGG | + | chr4_3:9042650-9042669 | None:intergenic | 35.0% | |
CATTATGGAAGGGAAAGAAA+GGG | + | chr4_3:9042651-9042670 | None:intergenic | 35.0% | |
ACATTATGGAAGGGAAAGAA+AGG | + | chr4_3:9042652-9042671 | None:intergenic | 35.0% | |
! | CAGGTGTTATATAACTGCAA+GGG | + | chr4_3:9042677-9042696 | None:intergenic | 35.0% |
CTGAAGTTATTGCAGTTTGA+CGG | - | chr4_3:9042716-9042735 | Msa0628400:CDS | 35.0% | |
TGAAGTTATTGCAGTTTGAC+GGG | - | chr4_3:9042717-9042736 | Msa0628400:CDS | 35.0% | |
GGATCCATATGAATTTCAAC+CGG | - | chr4_3:9042867-9042886 | Msa0628400:CDS | 35.0% | |
!!! | CCATGTAACACTTGTTTTAC+CGG | + | chr4_3:9042889-9042908 | None:intergenic | 35.0% |
! | TCAGGTTTTTCTTGCTTGTT+TGG | - | chr4_3:9042998-9043017 | Msa0628400:CDS | 35.0% |
AGTAGGAATATCAAGAAGCA+CGG | + | chr4_3:9043245-9043264 | None:intergenic | 35.0% | |
TGTCTTCAAAGACACTTGTT+TGG | - | chr4_3:9043392-9043411 | Msa0628400:five_prime_UTR | 35.0% | |
CACTCCTAAATCTCCAATCT+AGG | - | chr4_3:9038222-9038241 | Msa0628400:three_prime_UTR | 40.0% | |
ATTGAAAGGAAGGGATTGAG+CGG | + | chr4_3:9038265-9038284 | None:intergenic | 40.0% | |
!!! | TGTGGGGTTCTTGTTTTTTG+GGG | - | chr4_3:9038480-9038499 | Msa0628400:three_prime_UTR | 40.0% |
GATGAAGAAGAAGAGGAAAG+AGG | - | chr4_3:9038646-9038665 | Msa0628400:intron | 40.0% | |
TGAAGAAGAAGAGGAAAGAG+GGG | - | chr4_3:9038648-9038667 | Msa0628400:intron | 40.0% | |
AGAGTGAAGATCTTCGTGTT+AGG | - | chr4_3:9038698-9038717 | Msa0628400:intron | 40.0% | |
GAGTGAAGATCTTCGTGTTA+GGG | - | chr4_3:9038699-9038718 | Msa0628400:intron | 40.0% | |
GTTCGTTCTGATGATTCAGA+AGG | - | chr4_3:9038721-9038740 | Msa0628400:intron | 40.0% | |
TCTGATGATTCAGAAGGTGA+AGG | - | chr4_3:9038727-9038746 | Msa0628400:intron | 40.0% | |
GTTTATGAGGAGAAAGGTGA+AGG | - | chr4_3:9038841-9038860 | Msa0628400:three_prime_UTR | 40.0% | |
! | TGGTTCTGTGATTGTGGTTA+AGG | - | chr4_3:9038873-9038892 | Msa0628400:intron | 40.0% |
! | TTCTGGTGAGGTTAATTTGG+AGG | - | chr4_3:9038936-9038955 | Msa0628400:intron | 40.0% |
! | TAACTCCGACTTTTCAAAGG+CGG | - | chr4_3:9039551-9039570 | Msa0628400:intron | 40.0% |
TCCCCATTTCTTGTCATCTT+TGG | + | chr4_3:9039605-9039624 | None:intergenic | 40.0% | |
ATTTAGAGGAGACCTTCTAG+GGG | - | chr4_3:9039765-9039784 | Msa0628400:intron | 40.0% | |
!! | CTTCTAGGGGTAATTTTCGA+GGG | - | chr4_3:9039778-9039797 | Msa0628400:intron | 40.0% |
CAATCAAAATCAGGTGCCTA+AGG | - | chr4_3:9039917-9039936 | Msa0628400:CDS | 40.0% | |
CTTCCTTTCACAACAACCTT+AGG | + | chr4_3:9039936-9039955 | None:intergenic | 40.0% | |
AAGGTTGTTGTGAAAGGAAG+AGG | - | chr4_3:9039936-9039955 | Msa0628400:CDS | 40.0% | |
AGGTTGTTGTGAAAGGAAGA+GGG | - | chr4_3:9039937-9039956 | Msa0628400:CDS | 40.0% | |
! | TTCTGCATTGGATGATGGTA+TGG | + | chr4_3:9040168-9040187 | None:intergenic | 40.0% |
TCAGATTCTGCATTGGATGA+TGG | + | chr4_3:9040173-9040192 | None:intergenic | 40.0% | |
! | AAGTTTTCTTAGCAGGCACA+GGG | + | chr4_3:9040196-9040215 | None:intergenic | 40.0% |
!! | ATTTGGACATCCCGTTTTTG+TGG | + | chr4_3:9040296-9040315 | None:intergenic | 40.0% |
CAAAAACGGGATGTCCAAAT+TGG | - | chr4_3:9040296-9040315 | Msa0628400:intron | 40.0% | |
CAGGAATATTCACCCAGTTA+TGG | - | chr4_3:9040328-9040347 | Msa0628400:intron | 40.0% | |
TATTCACCCAGTTATGGATG+AGG | - | chr4_3:9040334-9040353 | Msa0628400:intron | 40.0% | |
ATTCACCCAGTTATGGATGA+GGG | - | chr4_3:9040335-9040354 | Msa0628400:intron | 40.0% | |
GAAAACCCTCATCCATAACT+GGG | + | chr4_3:9040343-9040362 | None:intergenic | 40.0% | |
! | AGTTATGGATGAGGGTTTTC+CGG | - | chr4_3:9040343-9040362 | Msa0628400:intron | 40.0% |
!! | TGTTGTTGATTCCATCAGCA+TGG | - | chr4_3:9040400-9040419 | Msa0628400:intron | 40.0% |
TCATAGGCTTTCCAACAGAT+GGG | + | chr4_3:9040454-9040473 | None:intergenic | 40.0% | |
TTCATAGGCTTTCCAACAGA+TGG | + | chr4_3:9040455-9040474 | None:intergenic | 40.0% | |
! | TTTCTCAATCTCCTTTTCCC+AGG | - | chr4_3:9040516-9040535 | Msa0628400:intron | 40.0% |
! | TGATTCTGGAGAAACAGATG+TGG | - | chr4_3:9040775-9040794 | Msa0628400:CDS | 40.0% |
TTTCGCTTTACCTGATTCTG+AGG | + | chr4_3:9040801-9040820 | None:intergenic | 40.0% | |
TCAGAATCAGGTAAAGCGAA+AGG | - | chr4_3:9040800-9040819 | Msa0628400:CDS | 40.0% | |
TTCAAACCTGGTAAGAAGGT+GGG | + | chr4_3:9040950-9040969 | None:intergenic | 40.0% | |
TTTCAAACCTGGTAAGAAGG+TGG | + | chr4_3:9040951-9040970 | None:intergenic | 40.0% | |
AGAACTTGCACTAAGTAGAC+AGG | + | chr4_3:9041005-9041024 | None:intergenic | 40.0% | |
ATATACTTGGGGTTAGGTCT+TGG | - | chr4_3:9041369-9041388 | Msa0628400:CDS | 40.0% | |
TATACTTGGGGTTAGGTCTT+GGG | - | chr4_3:9041370-9041389 | Msa0628400:CDS | 40.0% | |
! | TACAGGAGGTATGTGAGATT+GGG | - | chr4_3:9041417-9041436 | Msa0628400:CDS | 40.0% |
TTGGATGCAGTCATGCAATT+TGG | - | chr4_3:9041569-9041588 | Msa0628400:CDS | 40.0% | |
! | GAGGATTAGCAACATATCCA+GGG | + | chr4_3:9041643-9041662 | None:intergenic | 40.0% |
! | TGAGGATTAGCAACATATCC+AGG | + | chr4_3:9041644-9041663 | None:intergenic | 40.0% |
TATGTTGCTAATCCTCAGCT+TGG | - | chr4_3:9041647-9041666 | Msa0628400:CDS | 40.0% | |
TGTATTTAGGCTACCAGTCT+TGG | - | chr4_3:9041790-9041809 | Msa0628400:intron | 40.0% | |
! | TCACATTTTCCTTGCTGCAA+AGG | + | chr4_3:9042032-9042051 | None:intergenic | 40.0% |
TTGAAGCCACCACAAAAAAC+TGG | - | chr4_3:9042069-9042088 | Msa0628400:intron | 40.0% | |
GAGCTGGTAAATGATGAGTA+TGG | - | chr4_3:9042174-9042193 | Msa0628400:intron | 40.0% | |
!! | GAGATGAATTTTGGTCAGTG+AGG | - | chr4_3:9042322-9042341 | Msa0628400:intron | 40.0% |
GATCAAAAGCTGGAGAACAA+AGG | + | chr4_3:9042486-9042505 | None:intergenic | 40.0% | |
! | TTGTTCTCCAGCTTTTGATC+TGG | - | chr4_3:9042486-9042505 | Msa0628400:intron | 40.0% |
!! | CTTTTGATCTGGAGCACTTT+GGG | - | chr4_3:9042497-9042516 | Msa0628400:intron | 40.0% |
TTATGGAAGGGAAAGAAAGG+GGG | + | chr4_3:9042649-9042668 | None:intergenic | 40.0% | |
! | GCAGGTGTTATATAACTGCA+AGG | + | chr4_3:9042678-9042697 | None:intergenic | 40.0% |
CTGCAATAACTTCAGGAATG+TGG | + | chr4_3:9042711-9042730 | None:intergenic | 40.0% | |
CGTCAAACTGCAATAACTTC+AGG | + | chr4_3:9042718-9042737 | None:intergenic | 40.0% | |
CCGGTAAAACAAGTGTTACA+TGG | - | chr4_3:9042886-9042905 | Msa0628400:CDS | 40.0% | |
AAGCTTGTGAGAAACTAGTC+AGG | - | chr4_3:9043031-9043050 | Msa0628400:five_prime_UTR | 40.0% | |
CTTCAAAGACACTTGTTTGG+CGG | - | chr4_3:9043395-9043414 | Msa0628400:five_prime_UTR | 40.0% | |
CGGCAAACTTCATATGTTCA+CGG | - | chr4_3:9043415-9043434 | Msa0628400:five_prime_UTR | 40.0% | |
! | TGGGATCTGAAACCCTAGAT+TGG | + | chr4_3:9038238-9038257 | None:intergenic | 45.0% |
TTGAAAGGAAGGGATTGAGC+GGG | + | chr4_3:9038264-9038283 | None:intergenic | 45.0% | |
!!! | CGTTTTACGGTTCTGGGTTT+TGG | - | chr4_3:9038438-9038457 | Msa0628400:three_prime_UTR | 45.0% |
!!! | GTTCTGGGTTTTGGAATTCG+TGG | - | chr4_3:9038447-9038466 | Msa0628400:three_prime_UTR | 45.0% |
TTACGAGAGTGATCCTGAAG+AGG | - | chr4_3:9038579-9038598 | Msa0628400:intron | 45.0% | |
GATGATTCAGAAGGTGAAGG+TGG | - | chr4_3:9038730-9038749 | Msa0628400:intron | 45.0% | |
! | TGAGGAAGAAGAGTATGAGG+AGG | - | chr4_3:9038804-9038823 | Msa0628400:intron | 45.0% |
! | GAGGAAGAAGAGTATGAGGA+GGG | - | chr4_3:9038805-9038824 | Msa0628400:intron | 45.0% |
TATGAGGAGAAAGGTGAAGG+TGG | - | chr4_3:9038844-9038863 | Msa0628400:three_prime_UTR | 45.0% | |
ATGAGGAGAAAGGTGAAGGT+GGG | - | chr4_3:9038845-9038864 | Msa0628400:three_prime_UTR | 45.0% | |
!! | GGTTGATGGTTCTGTGATTG+TGG | - | chr4_3:9038867-9038886 | Msa0628400:three_prime_UTR | 45.0% |
GTGGTTAAGGAATCTGATGG+TGG | - | chr4_3:9038886-9038905 | Msa0628400:intron | 45.0% | |
!! | TAAGGAATCTGATGGTGGTG+TGG | - | chr4_3:9038891-9038910 | Msa0628400:intron | 45.0% |
GGAAGAAGAAGATTCTGGTG+AGG | - | chr4_3:9038924-9038943 | Msa0628400:intron | 45.0% | |
!! | ATGTAAAAGGCACCAGCAGT+GGG | + | chr4_3:9038991-9039010 | None:intergenic | 45.0% |
GCGGTCATCATGCATGTAAA+AGG | + | chr4_3:9039004-9039023 | None:intergenic | 45.0% | |
ACATGCATGATGACCGCTTT+AGG | - | chr4_3:9039007-9039026 | Msa0628400:intron | 45.0% | |
CATGCATGATGACCGCTTTA+GGG | - | chr4_3:9039008-9039027 | Msa0628400:intron | 45.0% | |
ACAATTCTAATGCCCGCCAA+AGG | - | chr4_3:9039031-9039050 | Msa0628400:three_prime_UTR | 45.0% | |
TTAGTGTCAAAGCGTGAGTC+AGG | - | chr4_3:9039240-9039259 | Msa0628400:CDS | 45.0% | |
TAGTGTCAAAGCGTGAGTCA+GGG | - | chr4_3:9039241-9039260 | Msa0628400:CDS | 45.0% | |
GTGCGTACACTTTAGATCGA+AGG | - | chr4_3:9039400-9039419 | Msa0628400:intron | 45.0% | |
! | TGCATCCGCCTTTGAAAAGT+CGG | + | chr4_3:9039559-9039578 | None:intergenic | 45.0% |
! | ACTTTTCAAAGGCGGATGCA+TGG | - | chr4_3:9039559-9039578 | Msa0628400:intron | 45.0% |
CCTCGAAAATTACCCCTAGA+AGG | + | chr4_3:9039780-9039799 | None:intergenic | 45.0% | |
!! | CCTTCTAGGGGTAATTTTCG+AGG | - | chr4_3:9039777-9039796 | Msa0628400:intron | 45.0% |
GTGCCTAAGGTTGTTGTGAA+AGG | - | chr4_3:9039930-9039949 | Msa0628400:CDS | 45.0% | |
TTGGTAGGTTCATACCTTCG+AGG | + | chr4_3:9039963-9039982 | None:intergenic | 45.0% | |
GGTATGAACCTACCAACAGA+AGG | - | chr4_3:9039967-9039986 | Msa0628400:CDS | 45.0% | |
GAACCTACCAACAGAAGGAA+TGG | - | chr4_3:9039972-9039991 | Msa0628400:CDS | 45.0% | |
! | GAAGTTTTCTTAGCAGGCAC+AGG | + | chr4_3:9040197-9040216 | None:intergenic | 45.0% |
TCTTTGTTAGAAGAGCCCGA+GGG | + | chr4_3:9040263-9040282 | None:intergenic | 45.0% | |
TTCTTTGTTAGAAGAGCCCG+AGG | + | chr4_3:9040264-9040283 | None:intergenic | 45.0% | |
AACTGGGTGAATATTCCTGC+TGG | + | chr4_3:9040327-9040346 | None:intergenic | 45.0% | |
GGAAAACCCTCATCCATAAC+TGG | + | chr4_3:9040344-9040363 | None:intergenic | 45.0% | |
ATACAGCTTGTCCATGCTGA+TGG | + | chr4_3:9040414-9040433 | None:intergenic | 45.0% | |
ACTTGAGTATGTGAGGGAAC+AGG | + | chr4_3:9040593-9040612 | None:intergenic | 45.0% | |
AGTTTCTCCAACACAACTGC+AGG | - | chr4_3:9040619-9040638 | Msa0628400:CDS | 45.0% | |
TGAATAGCCTGCAGTTGTGT+TGG | + | chr4_3:9040629-9040648 | None:intergenic | 45.0% | |
ATTCAGAGAAGTTCTGCACC+AGG | - | chr4_3:9040644-9040663 | Msa0628400:CDS | 45.0% | |
TTCAGAGAAGTTCTGCACCA+GGG | - | chr4_3:9040645-9040664 | Msa0628400:CDS | 45.0% | |
GAAGATTGAGATCCACTACC+AGG | + | chr4_3:9040719-9040738 | None:intergenic | 45.0% | |
! | AGGTAAAGCGAAAGGTGCAT+TGG | - | chr4_3:9040808-9040827 | Msa0628400:CDS | 45.0% |
! | TAAAGCGAAAGGTGCATTGG+TGG | - | chr4_3:9040811-9040830 | Msa0628400:CDS | 45.0% |
! | AAAGCGAAAGGTGCATTGGT+GGG | - | chr4_3:9040812-9040831 | Msa0628400:CDS | 45.0% |
TAAACAAAAGGTCCCCTTCC+AGG | + | chr4_3:9040863-9040882 | None:intergenic | 45.0% | |
!! | GGAAGGGGACCTTTTGTTTA+TGG | - | chr4_3:9040863-9040882 | Msa0628400:CDS | 45.0% |
!! | AGGGGACCTTTTGTTTATGG+TGG | - | chr4_3:9040866-9040885 | Msa0628400:CDS | 45.0% |
!! | GGGGACCTTTTGTTTATGGT+GGG | - | chr4_3:9040867-9040886 | Msa0628400:CDS | 45.0% |
!! | GGGACCTTTTGTTTATGGTG+GGG | - | chr4_3:9040868-9040887 | Msa0628400:CDS | 45.0% |
TGTGCCCCACCATAAACAAA+AGG | + | chr4_3:9040875-9040894 | None:intergenic | 45.0% | |
!! | TTTTGTTTATGGTGGGGCAC+AGG | - | chr4_3:9040874-9040893 | Msa0628400:CDS | 45.0% |
!! | AATGGGTGCTGCTGGAAATA+TGG | - | chr4_3:9040898-9040917 | Msa0628400:CDS | 45.0% |
!! | ATGGGTGCTGCTGGAAATAT+GGG | - | chr4_3:9040899-9040918 | Msa0628400:CDS | 45.0% |
GGAAATATGGGCATCAGTCA+AGG | - | chr4_3:9040911-9040930 | Msa0628400:CDS | 45.0% | |
TCAAACCTGGTAAGAAGGTG+GGG | + | chr4_3:9040949-9040968 | None:intergenic | 45.0% | |
! | GTACAGGAGGTATGTGAGAT+TGG | - | chr4_3:9041416-9041435 | Msa0628400:CDS | 45.0% |
! | TATGTGAGATTGGGTACTGC+AGG | - | chr4_3:9041426-9041445 | Msa0628400:CDS | 45.0% |
GATGCAGTCATGCAATTTGG+AGG | - | chr4_3:9041572-9041591 | Msa0628400:CDS | 45.0% | |
TGCTAATCCTCAGCTTGGTT+TGG | - | chr4_3:9041652-9041671 | Msa0628400:CDS | 45.0% | |
GCTAATCCTCAGCTTGGTTT+GGG | - | chr4_3:9041653-9041672 | Msa0628400:CDS | 45.0% | |
! | GATTTTCCCAAACCAAGCTG+AGG | + | chr4_3:9041662-9041681 | None:intergenic | 45.0% |
TGGTAGCCTAAATACAGACG+AGG | + | chr4_3:9041786-9041805 | None:intergenic | 45.0% | |
!! | TCACCATACCTTGCTGTTGA+CGG | - | chr4_3:9041848-9041867 | Msa0628400:intron | 45.0% |
AACGACAGAATAAACCTCGC+AGG | - | chr4_3:9042199-9042218 | Msa0628400:intron | 45.0% | |
AATAAACCTCGCAGGCAAGT+TGG | - | chr4_3:9042207-9042226 | Msa0628400:intron | 45.0% | |
GTTATGCAGGCCTTACTCTT+AGG | - | chr4_3:9042459-9042478 | Msa0628400:intron | 45.0% | |
GAACAAAGGGCCTAAGAGTA+AGG | + | chr4_3:9042472-9042491 | None:intergenic | 45.0% | |
AAGTGCTCCAGATCAAAAGC+TGG | + | chr4_3:9042496-9042515 | None:intergenic | 45.0% | |
!! | GCTTTTGATCTGGAGCACTT+TGG | - | chr4_3:9042496-9042515 | Msa0628400:intron | 45.0% |
TATGGAAGGGAAAGAAAGGG+GGG | + | chr4_3:9042648-9042667 | None:intergenic | 45.0% | |
TAACTGCAAGGGCGACATTA+TGG | + | chr4_3:9042666-9042685 | None:intergenic | 45.0% | |
AGTTATTGCAGTTTGACGGG+TGG | - | chr4_3:9042720-9042739 | Msa0628400:CDS | 45.0% | |
TTTCCAACACACCCTCCTAT+TGG | - | chr4_3:9042813-9042832 | Msa0628400:CDS | 45.0% | |
! | GTCAGGCTTTTCGTGAACTA+TGG | - | chr4_3:9043048-9043067 | Msa0628400:five_prime_UTR | 45.0% |
TGAAGCAGCTGATTGCATCA+TGG | - | chr4_3:9043099-9043118 | Msa0628400:five_prime_UTR | 45.0% | |
TGAAAGGAAGGGATTGAGCG+GGG | + | chr4_3:9038263-9038282 | None:intergenic | 50.0% | |
TGAGGAGAAAGGTGAAGGTG+GGG | - | chr4_3:9038846-9038865 | Msa0628400:three_prime_UTR | 50.0% | |
AAAGGTGAAGGTGGGGTTGA+TGG | - | chr4_3:9038853-9038872 | Msa0628400:three_prime_UTR | 50.0% | |
!! | CATGTAAAAGGCACCAGCAG+TGG | + | chr4_3:9038992-9039011 | None:intergenic | 50.0% |
! | TTAGATCGAAGGCACGTGCA+TGG | - | chr4_3:9039189-9039208 | Msa0628400:intron | 50.0% |
TTTCAAAGGCGGATGCATGG+TGG | - | chr4_3:9039562-9039581 | Msa0628400:intron | 50.0% | |
! | TGCATGGTGGAAGGAGATTG+TGG | - | chr4_3:9039575-9039594 | Msa0628400:intron | 50.0% |
! | GCATGGTGGAAGGAGATTGT+GGG | - | chr4_3:9039576-9039595 | Msa0628400:intron | 50.0% |
GCAAGATAGGCGCTATGATG+AGG | - | chr4_3:9039651-9039670 | Msa0628400:intron | 50.0% | |
GAGGACATGTTCGAGGAAAC+AGG | - | chr4_3:9039829-9039848 | Msa0628400:intron | 50.0% | |
GGACCATTCCTTCTGTTGGT+AGG | + | chr4_3:9039978-9039997 | None:intergenic | 50.0% | |
AGCTGGACCATTCCTTCTGT+TGG | + | chr4_3:9039982-9040001 | None:intergenic | 50.0% | |
!! | TTATTTTGCACCTGGGGAGC+TGG | + | chr4_3:9039999-9040018 | None:intergenic | 50.0% |
CACAGGGTCAGATTCTGCAT+TGG | + | chr4_3:9040180-9040199 | None:intergenic | 50.0% | |
! | ATCCCCTCCATTTTACCCCT+CGG | - | chr4_3:9040244-9040263 | Msa0628400:intron | 50.0% |
CTTTGTTAGAAGAGCCCGAG+GGG | + | chr4_3:9040262-9040281 | None:intergenic | 50.0% | |
TAGGCTTTCCAACAGATGGG+CGG | + | chr4_3:9040451-9040470 | None:intergenic | 50.0% | |
AATGTTCATTTGGCACCGCC+TGG | - | chr4_3:9040476-9040495 | Msa0628400:intron | 50.0% | |
ACATGGACACCAGAAGATCC+AGG | + | chr4_3:9040497-9040516 | None:intergenic | 50.0% | |
GAGTATGTGAGGGAACAGGT+TGG | + | chr4_3:9040589-9040608 | None:intergenic | 50.0% | |
ACAGATGTGGCCTCAGAATC+AGG | - | chr4_3:9040788-9040807 | Msa0628400:CDS | 50.0% | |
! | AAGCGAAAGGTGCATTGGTG+GGG | - | chr4_3:9040813-9040832 | Msa0628400:CDS | 50.0% |
! | AAAGGTGCATTGGTGGGGAA+GGG | - | chr4_3:9040818-9040837 | Msa0628400:CDS | 50.0% |
! | TTATGGTGGGGCACAGGTAA+TGG | - | chr4_3:9040880-9040899 | Msa0628400:CDS | 50.0% |
! | TATGGTGGGGCACAGGTAAT+GGG | - | chr4_3:9040881-9040900 | Msa0628400:CDS | 50.0% |
GGTAAGAAGGTGGGGAAGTT+TGG | + | chr4_3:9040941-9040960 | None:intergenic | 50.0% | |
AACTTCCCCACCTTCTTACC+AGG | - | chr4_3:9040941-9040960 | Msa0628400:CDS | 50.0% | |
TTTAGGCTACCAGTCTTGGC+TGG | - | chr4_3:9041794-9041813 | Msa0628400:intron | 50.0% | |
!! | CTTGCTGTTGACGGTGCTTA+CGG | - | chr4_3:9041857-9041876 | Msa0628400:intron | 50.0% |
TCAATTGCTGAGGTCTGTCC+CGG | + | chr4_3:9041890-9041909 | None:intergenic | 50.0% | |
GCAAGGGCGACATTATGGAA+GGG | + | chr4_3:9042661-9042680 | None:intergenic | 50.0% | |
TGCAAGGGCGACATTATGGA+AGG | + | chr4_3:9042662-9042681 | None:intergenic | 50.0% | |
GAATGTGGAACAGCATGAGC+AGG | + | chr4_3:9042696-9042715 | None:intergenic | 50.0% | |
! | CAACCAATAGGAGGGTGTGT+TGG | + | chr4_3:9042819-9042838 | None:intergenic | 50.0% |
GAAGGGATTGAGCGGGGATT+GGG | + | chr4_3:9038257-9038276 | None:intergenic | 55.0% | |
AGCGATCTTTGCGCCTCTTC+AGG | + | chr4_3:9038595-9038614 | None:intergenic | 55.0% | |
TCTTACAATGCGGAGACGCG+AGG | - | chr4_3:9038615-9038634 | Msa0628400:intron | 55.0% | |
GAAGAAGAGGAAAGAGGGGC+AGG | - | chr4_3:9038652-9038671 | Msa0628400:intron | 55.0% | |
! | TGGTGGTGTGGTACCCTCTT+TGG | - | chr4_3:9038903-9038922 | Msa0628400:intron | 55.0% |
GCGTGAGTCAGGGTCATGTA+TGG | - | chr4_3:9039251-9039270 | Msa0628400:CDS | 55.0% | |
! | AAAGGCGGATGCATGGTGGA+AGG | - | chr4_3:9039566-9039585 | Msa0628400:intron | 55.0% |
!! | AGGGGTAATTTTCGAGGGCG+TGG | - | chr4_3:9039783-9039802 | Msa0628400:intron | 55.0% |
CGTGGTAGAATTCGTGGCAC+TGG | - | chr4_3:9039801-9039820 | Msa0628400:intron | 55.0% | |
!! | AGAATTCGTGGCACTGGTCG+TGG | - | chr4_3:9039807-9039826 | Msa0628400:intron | 55.0% |
TGAAAGGAAGAGGGCCTCGA+AGG | - | chr4_3:9039946-9039965 | Msa0628400:CDS | 55.0% | |
! | TCCCCTCCATTTTACCCCTC+GGG | - | chr4_3:9040245-9040264 | Msa0628400:intron | 55.0% |
AGCCCGAGGGGTAAAATGGA+GGG | + | chr4_3:9040250-9040269 | None:intergenic | 55.0% | |
GAAGAGCCCGAGGGGTAAAA+TGG | + | chr4_3:9040254-9040273 | None:intergenic | 55.0% | |
TCCAAATTGGCAGCACCAGC+AGG | - | chr4_3:9040309-9040328 | Msa0628400:intron | 55.0% | |
!! | TCCTGCTGGTGCTGCCAATT+TGG | + | chr4_3:9040313-9040332 | None:intergenic | 55.0% |
TGGACACCAGAAGATCCAGG+CGG | + | chr4_3:9040494-9040513 | None:intergenic | 55.0% | |
AGAGAAGTTCTGCACCAGGG+CGG | - | chr4_3:9040648-9040667 | Msa0628400:CDS | 55.0% | |
ACAGACGTTAAAGTCCGCCC+TGG | + | chr4_3:9040665-9040684 | None:intergenic | 55.0% | |
CAAGCTACTGCCCCACAGAT+GGG | - | chr4_3:9040686-9040705 | Msa0628400:CDS | 55.0% | |
GAGATCCACTACCAGGTCGA+TGG | + | chr4_3:9040712-9040731 | None:intergenic | 55.0% | |
! | GAAAGGTGCATTGGTGGGGA+AGG | - | chr4_3:9040817-9040836 | Msa0628400:CDS | 55.0% |
! | GCATTGGTGGGGAAGGGAAA+TGG | - | chr4_3:9040824-9040843 | Msa0628400:CDS | 55.0% |
AAGGGAAATGGTGCTCCCCA+GGG | - | chr4_3:9040836-9040855 | Msa0628400:CDS | 55.0% | |
CAATTTGGAGGCCAGCATCC+TGG | - | chr4_3:9041584-9041603 | Msa0628400:CDS | 55.0% | |
!! | CTGGTGCTGCAGGAGCTTTA+GGG | - | chr4_3:9041813-9041832 | Msa0628400:intron | 55.0% |
!! | TGGTGCTGCAGGAGCTTTAG+GGG | - | chr4_3:9041814-9041833 | Msa0628400:intron | 55.0% |
GCACCGTCAACAGCAAGGTA+TGG | + | chr4_3:9041854-9041873 | None:intergenic | 55.0% | |
! | CGTAAGCACCGTCAACAGCA+AGG | + | chr4_3:9041859-9041878 | None:intergenic | 55.0% |
TGCGACGAACCTTTGCAGCA+AGG | - | chr4_3:9042020-9042039 | Msa0628400:intron | 55.0% | |
GGAAGGGATTGAGCGGGGAT+TGG | + | chr4_3:9038258-9038277 | None:intergenic | 60.0% | |
CCAGCAGTGGGCACAGCAAA+TGG | + | chr4_3:9038979-9038998 | None:intergenic | 60.0% | |
!! | CCATTTGCTGTGCCCACTGC+TGG | - | chr4_3:9038976-9038995 | Msa0628400:intron | 60.0% |
! | CGAGGGCGTGGTAGAATTCG+TGG | - | chr4_3:9039795-9039814 | Msa0628400:intron | 60.0% |
!! | ATTCGTGGCACTGGTCGTGG+AGG | - | chr4_3:9039810-9039829 | Msa0628400:intron | 60.0% |
GGTCGTGGAGGACATGTTCG+AGG | - | chr4_3:9039822-9039841 | Msa0628400:intron | 60.0% | |
AAGGAATGGTCCAGCTCCCC+AGG | - | chr4_3:9039986-9040005 | Msa0628400:intron | 60.0% | |
GCCCGAGGGGTAAAATGGAG+GGG | + | chr4_3:9040249-9040268 | None:intergenic | 60.0% | |
GAGCCCGAGGGGTAAAATGG+AGG | + | chr4_3:9040251-9040270 | None:intergenic | 60.0% | |
CAGTCTGTCCGCCCATCTGT+TGG | - | chr4_3:9040440-9040459 | Msa0628400:intron | 60.0% | |
TTGGCACCGCCTGGATCTTC+TGG | - | chr4_3:9040485-9040504 | Msa0628400:intron | 60.0% | |
! | TCTCCTTTTCCCAGGCCTGC+TGG | - | chr4_3:9040524-9040543 | Msa0628400:intron | 60.0% |
! | CTCCTTTTCCCAGGCCTGCT+GGG | - | chr4_3:9040525-9040544 | Msa0628400:intron | 60.0% |
GCAAGCTACTGCCCCACAGA+TGG | - | chr4_3:9040685-9040704 | Msa0628400:CDS | 60.0% | |
AGGTCGATGGCCCATCTGTG+GGG | + | chr4_3:9040699-9040718 | None:intergenic | 60.0% | |
CAGGTCGATGGCCCATCTGT+GGG | + | chr4_3:9040700-9040719 | None:intergenic | 60.0% | |
ATGGGCCATCGACCTGGTAG+TGG | - | chr4_3:9040704-9040723 | Msa0628400:CDS | 60.0% | |
GAAGGGAAATGGTGCTCCCC+AGG | - | chr4_3:9040835-9040854 | Msa0628400:CDS | 60.0% | |
!! | GCACAGGTAATGGGTGCTGC+TGG | - | chr4_3:9040890-9040909 | Msa0628400:CDS | 60.0% |
TTTGGAGGCCAGCATCCTGG+TGG | - | chr4_3:9041587-9041606 | Msa0628400:CDS | 60.0% | |
AGGCCAGCATCCTGGTGGTA+TGG | - | chr4_3:9041592-9041611 | Msa0628400:CDS | 60.0% | |
GGCCAGCATCCTGGTGGTAT+GGG | - | chr4_3:9041593-9041612 | Msa0628400:CDS | 60.0% | |
CTCCCATACCACCAGGATGC+TGG | + | chr4_3:9041598-9041617 | None:intergenic | 60.0% | |
!! | GCTGGTGCTGCAGGAGCTTT+AGG | - | chr4_3:9041812-9041831 | Msa0628400:intron | 60.0% |
CGGTGCTTACGGTCGTCAAC+CGG | - | chr4_3:9041868-9041887 | Msa0628400:intron | 60.0% | |
GGTGCTTACGGTCGTCAACC+GGG | - | chr4_3:9041869-9041888 | Msa0628400:intron | 60.0% | |
TGCAAGCCAACTTGCCTGCG+AGG | + | chr4_3:9042216-9042235 | None:intergenic | 60.0% | |
CCAGGTCGATGGCCCATCTG+TGG | + | chr4_3:9040701-9040720 | None:intergenic | 65.0% | |
CCACAGATGGGCCATCGACC+TGG | - | chr4_3:9040698-9040717 | Msa0628400:CDS | 65.0% | |
AATGGTGCTCCCCAGGGTCC+TGG | - | chr4_3:9040842-9040861 | Msa0628400:CDS | 65.0% | |
TGCTCCCCAGGGTCCTGGAA+GGG | - | chr4_3:9040847-9040866 | Msa0628400:CDS | 65.0% | |
AGGTCCCCTTCCAGGACCCT+GGG | + | chr4_3:9040855-9040874 | None:intergenic | 65.0% | |
AAGGTCCCCTTCCAGGACCC+TGG | + | chr4_3:9040856-9040875 | None:intergenic | 65.0% | |
CCTGCAGCACCAGCCAAGAC+TGG | + | chr4_3:9041806-9041825 | None:intergenic | 65.0% | |
!! | CCAGTCTTGGCTGGTGCTGC+AGG | - | chr4_3:9041803-9041822 | Msa0628400:intron | 65.0% |
GGCCCAGCAGGCCTGGGAAA+AGG | + | chr4_3:9040530-9040549 | None:intergenic | 70.0% | |
TTTCCCAGGCCTGCTGGGCC+TGG | - | chr4_3:9040530-9040549 | Msa0628400:intron | 70.0% | |
TTCCCAGGCCTGCTGGGCCT+GGG | - | chr4_3:9040531-9040550 | Msa0628400:intron | 70.0% | |
GGGATCGGTGCACCTCTCCC+AGG | + | chr4_3:9040551-9040570 | None:intergenic | 70.0% | |
GTGCTCCCCAGGGTCCTGGA+AGG | - | chr4_3:9040846-9040865 | Msa0628400:CDS | 70.0% | |
GCTCCCCAGGGTCCTGGAAG+GGG | - | chr4_3:9040848-9040867 | Msa0628400:CDS | 70.0% | |
GGTCCCCTTCCAGGACCCTG+GGG | + | chr4_3:9040854-9040873 | None:intergenic | 70.0% | |
CTCCCAGGCCCAGCAGGCCT+GGG | + | chr4_3:9040536-9040555 | None:intergenic | 75.0% | |
TCTCCCAGGCCCAGCAGGCC+TGG | + | chr4_3:9040537-9040556 | None:intergenic | 75.0% | |
AGGCCTGCTGGGCCTGGGAG+AGG | - | chr4_3:9040536-9040555 | Msa0628400:intron | 75.0% | |
GCACCTCTCCCAGGCCCAGC+AGG | + | chr4_3:9040542-9040561 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 9038124 | 9043447 | 9038124 | ID=Msa0628400;Name=Msa0628400 |
chr4_3 | mRNA | 9038124 | 9043447 | 9038124 | ID=Msa0628400-mRNA-1;Parent=Msa0628400;Name=Msa0628400-mRNA-1;_AED=0.06;_eAED=0.06;_QI=423|0.8|0.81|1|0.8|0.72|11|593|716 |
chr4_3 | exon | 9038124 | 9038569 | 9038124 | ID=Msa0628400-mRNA-1:exon:2706;Parent=Msa0628400-mRNA-1 |
chr4_3 | exon | 9038807 | 9038888 | 9038807 | ID=Msa0628400-mRNA-1:exon:2705;Parent=Msa0628400-mRNA-1 |
chr4_3 | exon | 9039026 | 9039103 | 9039026 | ID=Msa0628400-mRNA-1:exon:2704;Parent=Msa0628400-mRNA-1 |
chr4_3 | exon | 9039237 | 9039396 | 9039237 | ID=Msa0628400-mRNA-1:exon:2703;Parent=Msa0628400-mRNA-1 |
chr4_3 | exon | 9039481 | 9039533 | 9039481 | ID=Msa0628400-mRNA-1:exon:2702;Parent=Msa0628400-mRNA-1 |
chr4_3 | exon | 9039653 | 9039772 | 9039653 | ID=Msa0628400-mRNA-1:exon:2701;Parent=Msa0628400-mRNA-1 |
chr4_3 | exon | 9039878 | 9039992 | 9039878 | ID=Msa0628400-mRNA-1:exon:2700;Parent=Msa0628400-mRNA-1 |
chr4_3 | exon | 9040609 | 9041456 | 9040609 | ID=Msa0628400-mRNA-1:exon:2699;Parent=Msa0628400-mRNA-1 |
chr4_3 | exon | 9041550 | 9041800 | 9041550 | ID=Msa0628400-mRNA-1:exon:2698;Parent=Msa0628400-mRNA-1 |
chr4_3 | exon | 9041899 | 9041983 | 9041899 | ID=Msa0628400-mRNA-1:exon:2697;Parent=Msa0628400-mRNA-1 |
chr4_3 | exon | 9042519 | 9043447 | 9042519 | ID=Msa0628400-mRNA-1:exon:2696;Parent=Msa0628400-mRNA-1 |
chr4_3 | five_prime_UTR | 9043025 | 9043447 | 9043025 | ID=Msa0628400-mRNA-1:five_prime_utr;Parent=Msa0628400-mRNA-1 |
chr4_3 | CDS | 9042519 | 9043024 | 9042519 | ID=Msa0628400-mRNA-1:cds;Parent=Msa0628400-mRNA-1 |
chr4_3 | CDS | 9041899 | 9041983 | 9041899 | ID=Msa0628400-mRNA-1:cds;Parent=Msa0628400-mRNA-1 |
chr4_3 | CDS | 9041550 | 9041800 | 9041550 | ID=Msa0628400-mRNA-1:cds;Parent=Msa0628400-mRNA-1 |
chr4_3 | CDS | 9040609 | 9041456 | 9040609 | ID=Msa0628400-mRNA-1:cds;Parent=Msa0628400-mRNA-1 |
chr4_3 | CDS | 9039878 | 9039992 | 9039878 | ID=Msa0628400-mRNA-1:cds;Parent=Msa0628400-mRNA-1 |
chr4_3 | CDS | 9039653 | 9039772 | 9039653 | ID=Msa0628400-mRNA-1:cds;Parent=Msa0628400-mRNA-1 |
chr4_3 | CDS | 9039481 | 9039533 | 9039481 | ID=Msa0628400-mRNA-1:cds;Parent=Msa0628400-mRNA-1 |
chr4_3 | CDS | 9039237 | 9039396 | 9039237 | ID=Msa0628400-mRNA-1:cds;Parent=Msa0628400-mRNA-1 |
chr4_3 | CDS | 9039091 | 9039103 | 9039091 | ID=Msa0628400-mRNA-1:cds;Parent=Msa0628400-mRNA-1 |
chr4_3 | three_prime_UTR | 9039026 | 9039090 | 9039026 | ID=Msa0628400-mRNA-1:three_prime_utr;Parent=Msa0628400-mRNA-1 |
chr4_3 | three_prime_UTR | 9038807 | 9038888 | 9038807 | ID=Msa0628400-mRNA-1:three_prime_utr;Parent=Msa0628400-mRNA-1 |
chr4_3 | three_prime_UTR | 9038124 | 9038569 | 9038124 | ID=Msa0628400-mRNA-1:three_prime_utr;Parent=Msa0628400-mRNA-1 |
Gene Sequence |
Protein sequence |