Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0290050 | XP_003595886.1 | 93.144 | 423 | 2 | 1 | 1 | 396 | 1 | 423 | 0.0 | 797 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0290050 | sp|O22718|ACLA2_ARATH | 83.215 | 423 | 44 | 1 | 1 | 396 | 1 | 423 | 0.0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0290050 | G7IT44 | 93.144 | 423 | 2 | 1 | 1 | 396 | 1 | 423 | 0.0 | 797 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0251210 | Msa0290050 | 0.881033 | 3.357807e-70 | -8.615850e-47 |
| Msa0290050 | Msa0327810 | 0.852705 | 3.873261e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0290050 | MtrunA17_Chr2g0309471 | 93.144 | 423 | 2 | 1 | 1 | 396 | 1 | 423 | 0.0 | 797 |
| Msa0290050 | MtrunA17_Chr5g0413331 | 86.288 | 423 | 31 | 1 | 1 | 396 | 1 | 423 | 0.0 | 744 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0290050 | AT1G60810.2 | 83.215 | 423 | 44 | 1 | 1 | 396 | 1 | 423 | 0.0 | 723 |
| Msa0290050 | AT1G60810.1 | 83.215 | 423 | 44 | 1 | 1 | 396 | 1 | 423 | 0.0 | 723 |
| Msa0290050 | AT1G10670.4 | 82.506 | 423 | 47 | 1 | 1 | 396 | 1 | 423 | 0.0 | 717 |
| Msa0290050 | AT1G10670.2 | 82.506 | 423 | 47 | 1 | 1 | 396 | 1 | 423 | 0.0 | 717 |
| Msa0290050 | AT1G10670.1 | 82.506 | 423 | 47 | 1 | 1 | 396 | 1 | 423 | 0.0 | 717 |
| Msa0290050 | AT1G10670.3 | 78.781 | 443 | 47 | 2 | 1 | 396 | 1 | 443 | 0.0 | 704 |
| Msa0290050 | AT1G09430.1 | 75.895 | 419 | 74 | 1 | 1 | 392 | 1 | 419 | 0.0 | 659 |
Find 111 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCACCAAATTTCTCAATTC+TGG | 0.201559 | 2_3:-36661728 | None:intergenic |
| TCTACCAGAATTGAGAAATT+TGG | 0.220599 | 2_3:+36661724 | Msa0290050:three_prime_UTR |
| CTTACTTGTGCAGACTTAAT+TGG | 0.235768 | 2_3:-36658148 | None:intergenic |
| GTGAAACCTGACATGCTATT+TGG | 0.259630 | 2_3:+36659008 | Msa0290050:CDS |
| GTCAGGTTTCACAACCAATT+TGG | 0.260494 | 2_3:-36658997 | None:intergenic |
| CCTACCGAATCTTTCATTCA+TGG | 0.280049 | 2_3:+36660455 | Msa0290050:CDS |
| ATGGCTTTCATCTTCCAAAT+TGG | 0.286910 | 2_3:+36658983 | Msa0290050:CDS |
| TGCTTAGTTATCAATTCTTA+TGG | 0.287007 | 2_3:+36661649 | Msa0290050:exon |
| TAAACCCAGTGGGACGAATT+TGG | 0.288832 | 2_3:+36660749 | Msa0290050:CDS |
| ATTTCTCAATTCTGGTAGAT+TGG | 0.304242 | 2_3:-36661720 | None:intergenic |
| TGCTAGACCTCTTTGGTAGT+TGG | 0.322062 | 2_3:-36661432 | None:intergenic |
| ATGCCAGTCATTGTTGCTTC+AGG | 0.322959 | 2_3:-36661593 | None:intergenic |
| TCTGCATAATTTCCAAGTTC+AGG | 0.323143 | 2_3:-36660936 | None:intergenic |
| CTACATTCAGTGGCATAATT+CGG | 0.324225 | 2_3:+36661211 | Msa0290050:CDS |
| CTGCAAGACCTCGCCTTCCT+TGG | 0.327186 | 2_3:-36660973 | None:intergenic |
| GGTTGAGAATGTTTGTATTC+TGG | 0.332508 | 2_3:+36661792 | Msa0290050:three_prime_UTR |
| TGGTTTGGTTGCCTTGAATC+TGG | 0.344146 | 2_3:+36659046 | Msa0290050:CDS |
| CGATGGAAAGCCTTATCCTT+TGG | 0.345095 | 2_3:+36660204 | Msa0290050:CDS |
| AGAGCACTTGGGGAGGAAAT+TGG | 0.347507 | 2_3:+36661461 | Msa0290050:CDS |
| ATTGAATTTCCTTTGCCATT+TGG | 0.351033 | 2_3:+36660419 | Msa0290050:CDS |
| CTTGGTTATGCTCCTGAACT+TGG | 0.352483 | 2_3:+36660924 | Msa0290050:CDS |
| GAATTGATATTGAAGAGAAC+TGG | 0.362179 | 2_3:+36659373 | Msa0290050:CDS |
| GCTAGACCTCTTTGGTAGTT+GGG | 0.362251 | 2_3:-36661431 | None:intergenic |
| TTATTACAGGTAGGAGATCT+TGG | 0.365670 | 2_3:+36660906 | Msa0290050:intron |
| AAATTGAAGTTGTCATAAAT+AGG | 0.378397 | 2_3:-36661924 | None:intergenic |
| TCAACAATGAAGGTCGTAAT+AGG | 0.383106 | 2_3:-36659264 | None:intergenic |
| TACATTCAGTGGCATAATTC+GGG | 0.385304 | 2_3:+36661212 | Msa0290050:CDS |
| CTCATTGATATCAGTTGATT+CGG | 0.388580 | 2_3:-36658943 | None:intergenic |
| GTTATATAACCAACCTCAAT+TGG | 0.393618 | 2_3:-36661488 | None:intergenic |
| CTGATCTTCTTACGTGCCAT+TGG | 0.415193 | 2_3:-36658064 | None:intergenic |
| GTATATGTATTTATAGAGTT+AGG | 0.416020 | 2_3:-36657761 | None:intergenic |
| TGTGGAAAACTCTGGACTCT+TGG | 0.416396 | 2_3:+36661998 | Msa0290050:three_prime_UTR |
| GTGGAAAACTCTGGACTCTT+GGG | 0.444192 | 2_3:+36661999 | Msa0290050:three_prime_UTR |
| GGTTGCCTTGAATCTGGATG+TGG | 0.453233 | 2_3:+36659052 | Msa0290050:CDS |
| GGAAATTGGCATTCCAATTG+AGG | 0.453716 | 2_3:+36661475 | Msa0290050:CDS |
| TGCAAGACCTCGCCTTCCTT+GGG | 0.460623 | 2_3:-36660972 | None:intergenic |
| CACACCTTCTCGTTCACCAT+TGG | 0.464828 | 2_3:+36657812 | Msa0290050:five_prime_UTR |
| AGTGGGACGAATTTGGACTA+TGG | 0.472417 | 2_3:+36660756 | Msa0290050:CDS |
| CTTTAAAATATAGGTTGAGA+TGG | 0.473744 | 2_3:+36659227 | Msa0290050:intron |
| AAGCAGAAGCAGTGATGCAC+TGG | 0.476598 | 2_3:-36661631 | None:intergenic |
| CCTCTCATATCCAAAGGATA+AGG | 0.478420 | 2_3:-36660214 | None:intergenic |
| TTTAAAATATAGGTTGAGAT+GGG | 0.478452 | 2_3:+36659228 | Msa0290050:intron |
| TCCAGCCACATCCAGATTCA+AGG | 0.478801 | 2_3:-36659057 | None:intergenic |
| AATTTCCTTTGCCATTTGGA+AGG | 0.482213 | 2_3:+36660423 | Msa0290050:CDS |
| AGGTAGAACTCTTCATTATG+TGG | 0.484428 | 2_3:-36659297 | None:intergenic |
| AATGACTGGCATATGCAAAC+AGG | 0.487475 | 2_3:+36661604 | Msa0290050:CDS |
| AAGCGCATCTTTAAAATTCA+CGG | 0.487780 | 2_3:+36660723 | Msa0290050:CDS |
| TGAACGAGAAGGTGTGATAT+TGG | 0.490501 | 2_3:-36657805 | None:intergenic |
| CGAATTTGGACTATGGTAGC+TGG | 0.492714 | 2_3:+36660763 | Msa0290050:CDS |
| CATTCATGGATTAGACGAAA+AGG | 0.498036 | 2_3:+36660469 | Msa0290050:CDS |
| GCCTTGAATCTGGATGTGGC+TGG | 0.498854 | 2_3:+36659056 | Msa0290050:CDS |
| AATCCTTTCGCTCTTGTCGA+TGG | 0.506060 | 2_3:+36660187 | Msa0290050:CDS |
| TGGCATAATTCGGGCTCTGA+AGG | 0.509155 | 2_3:+36661221 | Msa0290050:CDS |
| TTTGGAAAACGTGGCAAAAG+TGG | 0.509225 | 2_3:+36659026 | Msa0290050:CDS |
| GTCTATCTGAGACAATGTTA+AGG | 0.510544 | 2_3:-36659317 | None:intergenic |
| CGAGCCCTTGTGATCGGAGG+GGG | 0.514169 | 2_3:+36661162 | Msa0290050:CDS |
| AAAACGTGGCAAAAGTGGTT+TGG | 0.522182 | 2_3:+36659031 | Msa0290050:CDS |
| TAATCCATGAATGAAAGATT+CGG | 0.524096 | 2_3:-36660459 | None:intergenic |
| ATAGTCCAAATTCGTCCCAC+TGG | 0.524129 | 2_3:-36660754 | None:intergenic |
| TGATTCTAAGAGGTTGTTGA+AGG | 0.527353 | 2_3:+36658093 | Msa0290050:CDS |
| GGACCTGAAGCAACAATGAC+TGG | 0.535680 | 2_3:+36661590 | Msa0290050:CDS |
| TATTGAAGAGAACTGGGATA+AGG | 0.538154 | 2_3:+36659380 | Msa0290050:CDS |
| TCAGAGAGTATGATTCTAAG+AGG | 0.541240 | 2_3:+36658083 | Msa0290050:CDS |
| GGACTCATAACCCTTCCAAA+TGG | 0.550734 | 2_3:-36660434 | None:intergenic |
| TGGACTATGGTAGCTGGAGG+AGG | 0.551064 | 2_3:+36660769 | Msa0290050:CDS |
| TGCGCAACTGCGAATCCTGA+TGG | 0.551312 | 2_3:+36661132 | Msa0290050:CDS |
| ATTTCCTTTGCCATTTGGAA+GGG | 0.554602 | 2_3:+36660424 | Msa0290050:CDS |
| AGCGAGCCCTTGTGATCGGA+GGG | 0.555628 | 2_3:+36661160 | Msa0290050:CDS |
| AAAAGAACGTCTAGGAAAAG+AGG | 0.556146 | 2_3:+36659094 | Msa0290050:CDS |
| GTTGAGATGGGTGGATGCAA+AGG | 0.556217 | 2_3:+36659240 | Msa0290050:CDS |
| GAGTGTAATCTACGCTGATA+CGG | 0.558091 | 2_3:+36660795 | Msa0290050:CDS |
| AAAATATAGGTTGAGATGGG+TGG | 0.559122 | 2_3:+36659231 | Msa0290050:intron |
| TAGTCCAAATTCGTCCCACT+GGG | 0.559233 | 2_3:-36660753 | None:intergenic |
| CACATCTATGTGAGGAGAGG+AGG | 0.562998 | 2_3:+36661407 | Msa0290050:CDS |
| CAAAAGCGAGCCCTTGTGAT+CGG | 0.563449 | 2_3:+36661156 | Msa0290050:CDS |
| TATCAATGAGTTAGTAGAGA+AGG | 0.567770 | 2_3:+36658956 | Msa0290050:CDS |
| GGTAGAACTCTTCATTATGT+GGG | 0.569405 | 2_3:-36659296 | None:intergenic |
| AATTGATATTGAAGAGAACT+GGG | 0.569900 | 2_3:+36659374 | Msa0290050:CDS |
| AAGCGAGCCCTTGTGATCGG+AGG | 0.575935 | 2_3:+36661159 | Msa0290050:CDS |
| CCTTATCCTTTGGATATGAG+AGG | 0.576585 | 2_3:+36660214 | Msa0290050:CDS |
| GACGAAAGGCTCAACAATGA+AGG | 0.581641 | 2_3:-36659274 | None:intergenic |
| GATGTTGCTGCTACATTCAG+TGG | 0.582780 | 2_3:+36661201 | Msa0290050:CDS |
| AGAGGGATAGGTAGATCCAA+TGG | 0.585479 | 2_3:-36657828 | None:intergenic |
| AGAATACAGCGGTGCACCCA+AGG | 0.585812 | 2_3:+36660956 | Msa0290050:CDS |
| TCTTCATTATGTGGGACGAA+AGG | 0.588065 | 2_3:-36659288 | None:intergenic |
| AATTTAATAATCTAATAAGG+TGG | 0.590349 | 2_3:+36661771 | Msa0290050:three_prime_UTR |
| AACATTGTCTCAGATAGACT+AGG | 0.593258 | 2_3:+36659321 | Msa0290050:CDS |
| TACAGCGGTGCACCCAAGGA+AGG | 0.595691 | 2_3:+36660960 | Msa0290050:CDS |
| CGGTGCACCCAAGGAAGGCG+AGG | 0.610688 | 2_3:+36660965 | Msa0290050:CDS |
| AGATCCAATGGTGAACGAGA+AGG | 0.610751 | 2_3:-36657816 | None:intergenic |
| ACATTGTCTCAGATAGACTA+GGG | 0.615163 | 2_3:+36659322 | Msa0290050:CDS |
| AGCTCTCCTCTCATATCCAA+AGG | 0.616144 | 2_3:-36660220 | None:intergenic |
| AAGGTGTGATATTGGTTGGT+GGG | 0.619894 | 2_3:-36657797 | None:intergenic |
| GAAGGTGTGATATTGGTTGG+TGG | 0.621500 | 2_3:-36657798 | None:intergenic |
| ATAACCCTTCCAAATGGCAA+AGG | 0.622380 | 2_3:-36660428 | None:intergenic |
| AATTCGGGCTCTGAAGGAGA+AGG | 0.623316 | 2_3:+36661227 | Msa0290050:CDS |
| CGAGAAGGTGTGATATTGGT+TGG | 0.623645 | 2_3:-36657801 | None:intergenic |
| TTTCCATCGACAAGAGCGAA+AGG | 0.628349 | 2_3:-36660190 | None:intergenic |
| ACTGAATGTAGCAGCAACAT+CGG | 0.637422 | 2_3:-36661199 | None:intergenic |
| TTCACGGTGTTAAACCCAGT+GGG | 0.652064 | 2_3:+36660739 | Msa0290050:CDS |
| CCATGAATGAAAGATTCGGT+AGG | 0.652636 | 2_3:-36660455 | None:intergenic |
| ATGCACATCTATGTGAGGAG+AGG | 0.664234 | 2_3:+36661404 | Msa0290050:CDS |
| GGAGGTCCCAACTACCAAAG+AGG | 0.680499 | 2_3:+36661425 | Msa0290050:CDS |
| AATTTGGAAGATGAAAGCCA+TGG | 0.684449 | 2_3:-36658981 | None:intergenic |
| ATTTGGACTATGGTAGCTGG+AGG | 0.686823 | 2_3:+36660766 | Msa0290050:CDS |
| AGTTAGTAGAGAAGGAACCA+TGG | 0.687082 | 2_3:+36658964 | Msa0290050:CDS |
| GACATGCTATTTGGAAAACG+TGG | 0.688407 | 2_3:+36659017 | Msa0290050:CDS |
| CAAACATGCACATCTATGTG+AGG | 0.701477 | 2_3:+36661399 | Msa0290050:CDS |
| GGAAATTATGCAGAATACAG+CGG | 0.703521 | 2_3:+36660945 | Msa0290050:CDS |
| GCGAGCCCTTGTGATCGGAG+GGG | 0.724383 | 2_3:+36661161 | Msa0290050:CDS |
| ATTCACGGTGTTAAACCCAG+TGG | 0.736148 | 2_3:+36660738 | Msa0290050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGAAAATATAATTCATTT+TGG | - | chr2_3:36659408-36659427 | None:intergenic | 10.0% |
| !!! | CAAATAAGAATTAATATTTT+TGG | - | chr2_3:36660296-36660315 | None:intergenic | 10.0% |
| !!! | AAATATTAATTCTTATTTGA+AGG | + | chr2_3:36660297-36660316 | Msa0290050:intron | 10.0% |
| !!! | ATTTTTATTATGAAAATCTT+AGG | + | chr2_3:36660668-36660687 | Msa0290050:intron | 10.0% |
| !!! | TTACAAAATTTGTTTTTGAT+TGG | + | chr2_3:36657952-36657971 | Msa0290050:intron | 15.0% |
| !!! | TTTATAGTTCTTGTTTTTTA+TGG | + | chr2_3:36658177-36658196 | Msa0290050:intron | 15.0% |
| !! | ACAATAAAATGATTTACATT+TGG | - | chr2_3:36658704-36658723 | None:intergenic | 15.0% |
| !!! | AAATTTGTTTTATTTTCTTC+AGG | + | chr2_3:36658917-36658936 | Msa0290050:intron | 15.0% |
| !!! | AAAGTTGATAAAAAAAAAGT+GGG | - | chr2_3:36659162-36659181 | None:intergenic | 15.0% |
| !!! | AAAAGTTGATAAAAAAAAAG+TGG | - | chr2_3:36659163-36659182 | None:intergenic | 15.0% |
| !!! | TTATTTTCTCAAATTTTGAT+CGG | - | chr2_3:36659828-36659847 | None:intergenic | 15.0% |
| !!! | AACTAATTACTTTATTTTAG+CGG | + | chr2_3:36659929-36659948 | Msa0290050:intron | 15.0% |
| !! | ATTCATAAGATATTATTACA+AGG | - | chr2_3:36660606-36660625 | None:intergenic | 15.0% |
| !! | TTTATACGAATTATTATTAC+AGG | + | chr2_3:36660893-36660912 | Msa0290050:intron | 15.0% |
| !!! | TTTTTATAATCAATCACAAA+CGG | - | chr2_3:36661311-36661330 | None:intergenic | 15.0% |
| !! | ATATATCAACAATCAATTAA+GGG | - | chr2_3:36661350-36661369 | None:intergenic | 15.0% |
| !! | AATATATCAACAATCAATTA+AGG | - | chr2_3:36661351-36661370 | None:intergenic | 15.0% |
| !! | AATTTAATAATCTAATAAGG+TGG | + | chr2_3:36661771-36661790 | Msa0290050:three_prime_UTR | 15.0% |
| !!! | TTTATCTATATATTGTTTTG+TGG | + | chr2_3:36661980-36661999 | Msa0290050:three_prime_UTR | 15.0% |
| !! | TTACAATGAAACTGAAAAAA+AGG | - | chr2_3:36657725-36657744 | None:intergenic | 20.0% |
| !! | GTATATGTATTTATAGAGTT+AGG | - | chr2_3:36657764-36657783 | None:intergenic | 20.0% |
| !! | GAAAATTTAAAAAGAACCAA+TGG | + | chr2_3:36658048-36658067 | Msa0290050:exon | 20.0% |
| !!! | ATTTTTAGCTTAAGTTTTGT+TGG | + | chr2_3:36658216-36658235 | Msa0290050:intron | 20.0% |
| !!! | TTTTTAGCTTAAGTTTTGTT+GGG | + | chr2_3:36658217-36658236 | Msa0290050:intron | 20.0% |
| !!! | ATCATGTATTTTATCTTACA+AGG | - | chr2_3:36658273-36658292 | None:intergenic | 20.0% |
| !! | CAAACTTGTATACATTATTT+CGG | - | chr2_3:36658472-36658491 | None:intergenic | 20.0% |
| !!! | AATTGATTTTTGAATGTTTG+TGG | + | chr2_3:36658579-36658598 | Msa0290050:intron | 20.0% |
| !!! | CATGTCTTTCTTTAAAATAT+AGG | + | chr2_3:36659218-36659237 | Msa0290050:intron | 20.0% |
| !!! | TTTAAAATATAGGTTGAGAT+GGG | + | chr2_3:36659228-36659247 | Msa0290050:intron | 20.0% |
| !!! | ACTTTGAGTATTAAAGTTTT+AGG | - | chr2_3:36659435-36659454 | None:intergenic | 20.0% |
| !! | TTATAAAGAAATAAATGAGC+AGG | - | chr2_3:36659462-36659481 | None:intergenic | 20.0% |
| !!! | ACACATTTTTTGTAAAAGAA+AGG | - | chr2_3:36659753-36659772 | None:intergenic | 20.0% |
| !!! | GTGATTTTCAATATATTTCA+AGG | + | chr2_3:36660027-36660046 | Msa0290050:CDS | 20.0% |
| !!! | AAGAATTAATATTTTTGGGA+GGG | - | chr2_3:36660291-36660310 | None:intergenic | 20.0% |
| !!! | TAAGAATTAATATTTTTGGG+AGG | - | chr2_3:36660292-36660311 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTTATTTTCAGA+TGG | + | chr2_3:36660390-36660409 | Msa0290050:intron | 20.0% |
| !!! | TGTTCTTTTTATTTTCAGAT+GGG | + | chr2_3:36660391-36660410 | Msa0290050:intron | 20.0% |
| !! | AATGAATTGAATATGATTGT+TGG | - | chr2_3:36660518-36660537 | None:intergenic | 20.0% |
| !!! | AATAGTTTAAGATTAGTGTT+TGG | - | chr2_3:36660553-36660572 | None:intergenic | 20.0% |
| !!! | TTTTATAATCAATCACAAAC+GGG | - | chr2_3:36661310-36661329 | None:intergenic | 20.0% |
| !! | AAATTGAAGTTGTCATAAAT+AGG | - | chr2_3:36661927-36661946 | None:intergenic | 20.0% |
| !!! | ACTTCAATTTTCTTCTTTAA+AGG | + | chr2_3:36661937-36661956 | Msa0290050:three_prime_UTR | 20.0% |
| !!! | CTTCAATTTTCTTCTTTAAA+GGG | + | chr2_3:36661938-36661957 | Msa0290050:three_prime_UTR | 20.0% |
| ! | ACTGAAAAAAAGGATATGTT+GGG | - | chr2_3:36657715-36657734 | None:intergenic | 25.0% |
| ! | AACTGAAAAAAAGGATATGT+TGG | - | chr2_3:36657716-36657735 | None:intergenic | 25.0% |
| !!! | TTTATCTTGTTTTGTGATGA+AGG | + | chr2_3:36658010-36658029 | Msa0290050:intron | 25.0% |
| !!! | TTATCTTGTTTTGTGATGAA+GGG | + | chr2_3:36658011-36658030 | Msa0290050:intron | 25.0% |
| ! | TACATTTGCACATTATAAGA+TGG | - | chr2_3:36658310-36658329 | None:intergenic | 25.0% |
| ! | ATTACTCTAACTTTCTGATA+AGG | + | chr2_3:36658432-36658451 | Msa0290050:intron | 25.0% |
| ! | TTACTCTAACTTTCTGATAA+GGG | + | chr2_3:36658433-36658452 | Msa0290050:intron | 25.0% |
| !!! | GAAAAAACAGTTCTAAAGTT+TGG | - | chr2_3:36659140-36659159 | None:intergenic | 25.0% |
| !!! | CTTTAAAATATAGGTTGAGA+TGG | + | chr2_3:36659227-36659246 | Msa0290050:intron | 25.0% |
| ! | AATTGATATTGAAGAGAACT+GGG | + | chr2_3:36659374-36659393 | Msa0290050:CDS | 25.0% |
| ! | ATTCAATATAAGCTACAAAG+TGG | + | chr2_3:36659481-36659500 | Msa0290050:intron | 25.0% |
| ! | AAAGTGGTTGTTAATATTTC+AGG | + | chr2_3:36659497-36659516 | Msa0290050:intron | 25.0% |
| ! | ACACCTTTAATCATAAGTTT+CGG | + | chr2_3:36659891-36659910 | Msa0290050:intron | 25.0% |
| ! | AAACCGAAACTTATGATTAA+AGG | - | chr2_3:36659897-36659916 | None:intergenic | 25.0% |
| !!! | AGAATTAATATTTTTGGGAG+GGG | - | chr2_3:36660290-36660309 | None:intergenic | 25.0% |
| !!! | GTTCTTTTTATTTTCAGATG+GGG | + | chr2_3:36660392-36660411 | Msa0290050:intron | 25.0% |
| ! | TAATCCATGAATGAAAGATT+CGG | - | chr2_3:36660462-36660481 | None:intergenic | 25.0% |
| ! | TATTACTACTAGACTTATCA+CGG | + | chr2_3:36660637-36660656 | Msa0290050:intron | 25.0% |
| ! | TACGAATTATTATTACAGGT+AGG | + | chr2_3:36660897-36660916 | Msa0290050:intron | 25.0% |
| ! | TTGTTGATATATTACAAACC+AGG | + | chr2_3:36661358-36661377 | Msa0290050:intron | 25.0% |
| !! | TTGATTAATTCTCTCTTTTC+AGG | + | chr2_3:36661562-36661581 | Msa0290050:intron | 25.0% |
| ! | TGCTTAGTTATCAATTCTTA+TGG | + | chr2_3:36661649-36661668 | Msa0290050:exon | 25.0% |
| AGCTACAAAGATCCATTTAA+GGG | - | chr2_3:36658406-36658425 | None:intergenic | 30.0% | |
| TAGCTACAAAGATCCATTTA+AGG | - | chr2_3:36658407-36658426 | None:intergenic | 30.0% | |
| GATTCAAATATGTGCATGTT+CGG | + | chr2_3:36658515-36658534 | Msa0290050:intron | 30.0% | |
| GAGCGTAAAATTTATGTTTG+CGG | - | chr2_3:36658653-36658672 | None:intergenic | 30.0% | |
| GAATATAGACTATGTGTGTT+TGG | - | chr2_3:36658781-36658800 | None:intergenic | 30.0% | |
| ! | TGCAATTTTTCACATTGAAC+AGG | + | chr2_3:36658875-36658894 | Msa0290050:intron | 30.0% |
| CTCATTGATATCAGTTGATT+CGG | - | chr2_3:36658946-36658965 | None:intergenic | 30.0% | |
| TATCAATGAGTTAGTAGAGA+AGG | + | chr2_3:36658956-36658975 | Msa0290050:CDS | 30.0% | |
| !! | AAAACAGTTCTAAAGTTTGG+AGG | - | chr2_3:36659137-36659156 | None:intergenic | 30.0% |
| ! | AGTATAAGCTTTTCTGAATG+TGG | + | chr2_3:36659348-36659367 | Msa0290050:CDS | 30.0% |
| GAATTGATATTGAAGAGAAC+TGG | + | chr2_3:36659373-36659392 | Msa0290050:CDS | 30.0% | |
| AAGACTGTATTTATTCCAAC+AGG | + | chr2_3:36659522-36659541 | Msa0290050:intron | 30.0% | |
| AGACTGTATTTATTCCAACA+GGG | + | chr2_3:36659523-36659542 | Msa0290050:intron | 30.0% | |
| AAAGTGAATATACCTCTAAG+GGG | - | chr2_3:36659693-36659712 | None:intergenic | 30.0% | |
| CAAAGTGAATATACCTCTAA+GGG | - | chr2_3:36659694-36659713 | None:intergenic | 30.0% | |
| GAAACTTATGATTAAAGGTG+TGG | - | chr2_3:36659892-36659911 | None:intergenic | 30.0% | |
| ! | TCTTTCATGCTTTTAGATCA+AGG | + | chr2_3:36659981-36660000 | Msa0290050:intron | 30.0% |
| ! | CTTTCATGCTTTTAGATCAA+GGG | + | chr2_3:36659982-36660001 | Msa0290050:intron | 30.0% |
| ! | AGAACTTGAAGATTTTCTCA+AGG | + | chr2_3:36660005-36660024 | Msa0290050:CDS | 30.0% |
| GGGAAAAAGAAAACAGAATA+AGG | - | chr2_3:36660130-36660149 | None:intergenic | 30.0% | |
| ! | AATCCAGATCTAAAACGATA+GGG | - | chr2_3:36660150-36660169 | None:intergenic | 30.0% |
| ! | AAATCCAGATCTAAAACGAT+AGG | - | chr2_3:36660151-36660170 | None:intergenic | 30.0% |
| CACAGTTGATTAATTCTAAG+TGG | - | chr2_3:36660346-36660365 | None:intergenic | 30.0% | |
| ATTGAATTTCCTTTGCCATT+TGG | + | chr2_3:36660419-36660438 | Msa0290050:CDS | 30.0% | |
| !! | AAGCGCATCTTTAAAATTCA+CGG | + | chr2_3:36660723-36660742 | Msa0290050:CDS | 30.0% |
| TCATGACGTAGTATGTTATA+AGG | - | chr2_3:36661257-36661276 | None:intergenic | 30.0% | |
| GTTATATAACCAACCTCAAT+TGG | - | chr2_3:36661491-36661510 | None:intergenic | 30.0% | |
| !!! | ATTCTCTCTTTTCAGGTATA+TGG | + | chr2_3:36661569-36661588 | Msa0290050:intron | 30.0% |
| ATTTCTCAATTCTGGTAGAT+TGG | - | chr2_3:36661723-36661742 | None:intergenic | 30.0% | |
| TCTACCAGAATTGAGAAATT+TGG | + | chr2_3:36661724-36661743 | Msa0290050:three_prime_UTR | 30.0% | |
| !! | TATTGTTTTGTGGAAAACTC+TGG | + | chr2_3:36661990-36662009 | Msa0290050:three_prime_UTR | 30.0% |
| CCAGATCAAATCAGCTTAAA+GGG | - | chr2_3:36657989-36658008 | None:intergenic | 35.0% | |
| !! | CCTTTAAGCTGATTTGATCT+GGG | + | chr2_3:36657987-36658006 | Msa0290050:intron | 35.0% |
| ! | TCAGAGAGTATGATTCTAAG+AGG | + | chr2_3:36658083-36658102 | Msa0290050:CDS | 35.0% |
| ! | TGATTCTAAGAGGTTGTTGA+AGG | + | chr2_3:36658093-36658112 | Msa0290050:CDS | 35.0% |
| !! | GAGCATTTTAAGAGAATCTC+TGG | + | chr2_3:36658115-36658134 | Msa0290050:CDS | 35.0% |
| !! | TTTTAAGAGAATCTCTGGAC+AGG | + | chr2_3:36658120-36658139 | Msa0290050:CDS | 35.0% |
| CTTACTTGTGCAGACTTAAT+TGG | - | chr2_3:36658151-36658170 | None:intergenic | 35.0% | |
| TCTAGACAACATGCTCAAAT+TGG | - | chr2_3:36658342-36658361 | None:intergenic | 35.0% | |
| ! | TATGATGATGTATGCAACAG+TGG | + | chr2_3:36658840-36658859 | Msa0290050:intron | 35.0% |
| AATTTGGAAGATGAAAGCCA+TGG | - | chr2_3:36658984-36659003 | None:intergenic | 35.0% | |
| ATGGCTTTCATCTTCCAAAT+TGG | + | chr2_3:36658983-36659002 | Msa0290050:CDS | 35.0% | |
| ! | GCTTTTGTAAAAGAACGTCT+AGG | + | chr2_3:36659086-36659105 | Msa0290050:CDS | 35.0% |
| AAAAGAACGTCTAGGAAAAG+AGG | + | chr2_3:36659094-36659113 | Msa0290050:CDS | 35.0% | |
| ! | AAAATATAGGTTGAGATGGG+TGG | + | chr2_3:36659231-36659250 | Msa0290050:intron | 35.0% |
| TCAACAATGAAGGTCGTAAT+AGG | - | chr2_3:36659267-36659286 | None:intergenic | 35.0% | |
| GGTAGAACTCTTCATTATGT+GGG | - | chr2_3:36659299-36659318 | None:intergenic | 35.0% | |
| AGGTAGAACTCTTCATTATG+TGG | - | chr2_3:36659300-36659319 | None:intergenic | 35.0% | |
| ! | GTCTATCTGAGACAATGTTA+AGG | - | chr2_3:36659320-36659339 | None:intergenic | 35.0% |
| AACATTGTCTCAGATAGACT+AGG | + | chr2_3:36659321-36659340 | Msa0290050:CDS | 35.0% | |
| ACATTGTCTCAGATAGACTA+GGG | + | chr2_3:36659322-36659341 | Msa0290050:CDS | 35.0% | |
| ! | ATAAGCTTTTCTGAATGTGG+AGG | + | chr2_3:36659351-36659370 | Msa0290050:CDS | 35.0% |
| TATTGAAGAGAACTGGGATA+AGG | + | chr2_3:36659380-36659399 | Msa0290050:CDS | 35.0% | |
| GACTGTATTTATTCCAACAG+GGG | + | chr2_3:36659524-36659543 | Msa0290050:intron | 35.0% | |
| GCAAAGTGAATATACCTCTA+AGG | - | chr2_3:36659695-36659714 | None:intergenic | 35.0% | |
| TTCTGTGAACATGTCAACAA+TGG | + | chr2_3:36659725-36659744 | Msa0290050:intron | 35.0% | |
| !! | TTCTCAAATTTTGATCGGTG+TGG | - | chr2_3:36659823-36659842 | None:intergenic | 35.0% |
| TTGAGTGTAACTACATGTGT+TGG | + | chr2_3:36659853-36659872 | Msa0290050:intron | 35.0% | |
| GCACATTCATGTTCTGTAAA+TGG | - | chr2_3:36660068-36660087 | None:intergenic | 35.0% | |
| !! | TTTCCCTATCGTTTTAGATC+TGG | + | chr2_3:36660144-36660163 | Msa0290050:intron | 35.0% |
| ! | AATTTCCTTTGCCATTTGGA+AGG | + | chr2_3:36660423-36660442 | Msa0290050:CDS | 35.0% |
| ! | ATTTCCTTTGCCATTTGGAA+GGG | + | chr2_3:36660424-36660443 | Msa0290050:CDS | 35.0% |
| !! | CATTCATGGATTAGACGAAA+AGG | + | chr2_3:36660469-36660488 | Msa0290050:CDS | 35.0% |
| !! | ATTTTAAAGATGCGCTTGTC+TGG | - | chr2_3:36660720-36660739 | None:intergenic | 35.0% |
| TTATTACAGGTAGGAGATCT+TGG | + | chr2_3:36660906-36660925 | Msa0290050:intron | 35.0% | |
| TCTGCATAATTTCCAAGTTC+AGG | - | chr2_3:36660939-36660958 | None:intergenic | 35.0% | |
| GGAAATTATGCAGAATACAG+CGG | + | chr2_3:36660945-36660964 | Msa0290050:CDS | 35.0% | |
| CTACATTCAGTGGCATAATT+CGG | + | chr2_3:36661211-36661230 | Msa0290050:CDS | 35.0% | |
| TACATTCAGTGGCATAATTC+GGG | + | chr2_3:36661212-36661231 | Msa0290050:CDS | 35.0% | |
| !!! | CTTCTTTTAGCTTTTGTTCC+TGG | - | chr2_3:36661379-36661398 | None:intergenic | 35.0% |
| !! | TCATTTTTGCTAGACCTCTT+TGG | - | chr2_3:36661442-36661461 | None:intergenic | 35.0% |
| !! | TAGCAAAAATGAGAGCACTT+GGG | + | chr2_3:36661450-36661469 | Msa0290050:CDS | 35.0% |
| CTCACCAAATTTCTCAATTC+TGG | - | chr2_3:36661731-36661750 | None:intergenic | 35.0% | |
| GGTTGAGAATGTTTGTATTC+TGG | + | chr2_3:36661792-36661811 | Msa0290050:three_prime_UTR | 35.0% | |
| ! | AAGGTGTGATATTGGTTGGT+GGG | - | chr2_3:36657800-36657819 | None:intergenic | 40.0% |
| ! | TGAACGAGAAGGTGTGATAT+TGG | - | chr2_3:36657808-36657827 | None:intergenic | 40.0% |
| CACATTGAGAGAAAGAGAGA+GGG | - | chr2_3:36657879-36657898 | None:intergenic | 40.0% | |
| !! | CCCTTTAAGCTGATTTGATC+TGG | + | chr2_3:36657986-36658005 | Msa0290050:intron | 40.0% |
| CCCAGATCAAATCAGCTTAA+AGG | - | chr2_3:36657990-36658009 | None:intergenic | 40.0% | |
| ! | TTTTCCACACTCACTAGTCA+AGG | - | chr2_3:36658372-36658391 | None:intergenic | 40.0% |
| AGATCCATTTAAGGGACTCT+CGG | - | chr2_3:36658398-36658417 | None:intergenic | 40.0% | |
| !! | GCATGTTCGGTTTCACTTTT+TGG | + | chr2_3:36658528-36658547 | Msa0290050:intron | 40.0% |
| ATGCAACAGTGGTTTATGAG+AGG | + | chr2_3:36658851-36658870 | Msa0290050:intron | 40.0% | |
| AGTTAGTAGAGAAGGAACCA+TGG | + | chr2_3:36658964-36658983 | Msa0290050:CDS | 40.0% | |
| GTCAGGTTTCACAACCAATT+TGG | - | chr2_3:36659000-36659019 | None:intergenic | 40.0% | |
| GTGAAACCTGACATGCTATT+TGG | + | chr2_3:36659008-36659027 | Msa0290050:CDS | 40.0% | |
| ! | CGTTTTCCAAATAGCATGTC+AGG | - | chr2_3:36659017-36659036 | None:intergenic | 40.0% |
| ! | GACATGCTATTTGGAAAACG+TGG | + | chr2_3:36659017-36659036 | Msa0290050:CDS | 40.0% |
| TTTGGAAAACGTGGCAAAAG+TGG | + | chr2_3:36659026-36659045 | Msa0290050:CDS | 40.0% | |
| AAAACGTGGCAAAAGTGGTT+TGG | + | chr2_3:36659031-36659050 | Msa0290050:CDS | 40.0% | |
| !! | TTCTAAAGTTTGGAGGACAG+AGG | - | chr2_3:36659130-36659149 | None:intergenic | 40.0% |
| TCTTCATTATGTGGGACGAA+AGG | - | chr2_3:36659291-36659310 | None:intergenic | 40.0% | |
| ! | TGAATATACCTCTAAGGGGA+GGG | - | chr2_3:36659689-36659708 | None:intergenic | 40.0% |
| !! | TCAAATTTTGATCGGTGTGG+CGG | - | chr2_3:36659820-36659839 | None:intergenic | 40.0% |
| ! | GTAACTACATGTGTTGGTGT+CGG | + | chr2_3:36659859-36659878 | Msa0290050:intron | 40.0% |
| ! | CTTATGATTAAAGGTGTGGC+TGG | - | chr2_3:36659888-36659907 | None:intergenic | 40.0% |
| CCTCTCATATCCAAAGGATA+AGG | - | chr2_3:36660217-36660236 | None:intergenic | 40.0% | |
| CCTTATCCTTTGGATATGAG+AGG | + | chr2_3:36660214-36660233 | Msa0290050:CDS | 40.0% | |
| ATAACCCTTCCAAATGGCAA+AGG | - | chr2_3:36660431-36660450 | None:intergenic | 40.0% | |
| ! | CCATGAATGAAAGATTCGGT+AGG | - | chr2_3:36660458-36660477 | None:intergenic | 40.0% |
| CCTACCGAATCTTTCATTCA+TGG | + | chr2_3:36660455-36660474 | Msa0290050:CDS | 40.0% | |
| GAGTGTAATCTACGCTGATA+CGG | + | chr2_3:36660795-36660814 | Msa0290050:CDS | 40.0% | |
| GCACTGCAAAGAGATTATCA+TGG | - | chr2_3:36661115-36661134 | None:intergenic | 40.0% | |
| ACTGAATGTAGCAGCAACAT+CGG | - | chr2_3:36661202-36661221 | None:intergenic | 40.0% | |
| TCAATCACAAACGGGATCTA+AGG | - | chr2_3:36661302-36661321 | None:intergenic | 40.0% | |
| CAAACATGCACATCTATGTG+AGG | + | chr2_3:36661399-36661418 | Msa0290050:CDS | 40.0% | |
| !! | CTAGCAAAAATGAGAGCACT+TGG | + | chr2_3:36661449-36661468 | Msa0290050:CDS | 40.0% |
| !! | AGCAAAAATGAGAGCACTTG+GGG | + | chr2_3:36661451-36661470 | Msa0290050:CDS | 40.0% |
| GGAAATTGGCATTCCAATTG+AGG | + | chr2_3:36661475-36661494 | Msa0290050:CDS | 40.0% | |
| ATTGGCATTCCAATTGAGGT+TGG | + | chr2_3:36661479-36661498 | Msa0290050:intron | 40.0% | |
| AATGACTGGCATATGCAAAC+AGG | + | chr2_3:36661604-36661623 | Msa0290050:CDS | 40.0% | |
| ! | GAAGGTGTGATATTGGTTGG+TGG | - | chr2_3:36657801-36657820 | None:intergenic | 45.0% |
| ! | CGAGAAGGTGTGATATTGGT+TGG | - | chr2_3:36657804-36657823 | None:intergenic | 45.0% |
| AGATCCAATGGTGAACGAGA+AGG | - | chr2_3:36657819-36657838 | None:intergenic | 45.0% | |
| AGAGGGATAGGTAGATCCAA+TGG | - | chr2_3:36657831-36657850 | None:intergenic | 45.0% | |
| GTTAGAGAGAGAGAGAGAGA+GGG | - | chr2_3:36657848-36657867 | None:intergenic | 45.0% | |
| CTCTCTCTCTCTCTCTCTAA+CGG | + | chr2_3:36657847-36657866 | Msa0290050:five_prime_UTR | 45.0% | |
| GCACATTGAGAGAAAGAGAG+AGG | - | chr2_3:36657880-36657899 | None:intergenic | 45.0% | |
| CTGATCTTCTTACGTGCCAT+TGG | - | chr2_3:36658067-36658086 | None:intergenic | 45.0% | |
| AACACCGAGAGTCCCTTAAA+TGG | + | chr2_3:36658391-36658410 | Msa0290050:intron | 45.0% | |
| !! | TGGTTTGGTTGCCTTGAATC+TGG | + | chr2_3:36659046-36659065 | Msa0290050:CDS | 45.0% |
| GACGAAAGGCTCAACAATGA+AGG | - | chr2_3:36659277-36659296 | None:intergenic | 45.0% | |
| GATGTAAGAGATTCCCCTGT+TGG | - | chr2_3:36659540-36659559 | None:intergenic | 45.0% | |
| ! | GTGAATATACCTCTAAGGGG+AGG | - | chr2_3:36659690-36659709 | None:intergenic | 45.0% |
| AATCCTTTCGCTCTTGTCGA+TGG | + | chr2_3:36660187-36660206 | Msa0290050:CDS | 45.0% | |
| TTTCCATCGACAAGAGCGAA+AGG | - | chr2_3:36660193-36660212 | None:intergenic | 45.0% | |
| ! | CGATGGAAAGCCTTATCCTT+TGG | + | chr2_3:36660204-36660223 | Msa0290050:CDS | 45.0% |
| AGCTCTCCTCTCATATCCAA+AGG | - | chr2_3:36660223-36660242 | None:intergenic | 45.0% | |
| GGACTCATAACCCTTCCAAA+TGG | - | chr2_3:36660437-36660456 | None:intergenic | 45.0% | |
| ! | ATTCACGGTGTTAAACCCAG+TGG | + | chr2_3:36660738-36660757 | Msa0290050:CDS | 45.0% |
| ! | TTCACGGTGTTAAACCCAGT+GGG | + | chr2_3:36660739-36660758 | Msa0290050:CDS | 45.0% |
| TAAACCCAGTGGGACGAATT+TGG | + | chr2_3:36660749-36660768 | Msa0290050:CDS | 45.0% | |
| TAGTCCAAATTCGTCCCACT+GGG | - | chr2_3:36660756-36660775 | None:intergenic | 45.0% | |
| ATAGTCCAAATTCGTCCCAC+TGG | - | chr2_3:36660757-36660776 | None:intergenic | 45.0% | |
| AGTGGGACGAATTTGGACTA+TGG | + | chr2_3:36660756-36660775 | Msa0290050:CDS | 45.0% | |
| CGAATTTGGACTATGGTAGC+TGG | + | chr2_3:36660763-36660782 | Msa0290050:CDS | 45.0% | |
| ATTTGGACTATGGTAGCTGG+AGG | + | chr2_3:36660766-36660785 | Msa0290050:CDS | 45.0% | |
| CTTGGTTATGCTCCTGAACT+TGG | + | chr2_3:36660924-36660943 | Msa0290050:CDS | 45.0% | |
| GATGTTGCTGCTACATTCAG+TGG | + | chr2_3:36661201-36661220 | Msa0290050:CDS | 45.0% | |
| ATGCACATCTATGTGAGGAG+AGG | + | chr2_3:36661404-36661423 | Msa0290050:CDS | 45.0% | |
| ! | GCTAGACCTCTTTGGTAGTT+GGG | - | chr2_3:36661434-36661453 | None:intergenic | 45.0% |
| ! | TGCTAGACCTCTTTGGTAGT+TGG | - | chr2_3:36661435-36661454 | None:intergenic | 45.0% |
| !! | AAAAATGAGAGCACTTGGGG+AGG | + | chr2_3:36661454-36661473 | Msa0290050:CDS | 45.0% |
| ! | ATGCCAGTCATTGTTGCTTC+AGG | - | chr2_3:36661596-36661615 | None:intergenic | 45.0% |
| TGTGGAAAACTCTGGACTCT+TGG | + | chr2_3:36661998-36662017 | Msa0290050:three_prime_UTR | 45.0% | |
| GTGGAAAACTCTGGACTCTT+GGG | + | chr2_3:36661999-36662018 | Msa0290050:three_prime_UTR | 45.0% | |
| !!! | AAATAAGAATTAATATTTTT+GGG | - | chr2_3:36660295-36660314 | None:intergenic | 5.0% |
| !!! | TTTTCATAATAAAAATTTAT+AGG | - | chr2_3:36660664-36660683 | None:intergenic | 5.0% |
| !! | AAAAATTTAATAATCTAATA+AGG | + | chr2_3:36661768-36661787 | Msa0290050:three_prime_UTR | 5.0% |
| CACACCTTCTCGTTCACCAT+TGG | + | chr2_3:36657812-36657831 | Msa0290050:five_prime_UTR | 50.0% | |
| AGAGAGAGAGAGAGAGGGAT+AGG | - | chr2_3:36657843-36657862 | None:intergenic | 50.0% | |
| CGTTAGAGAGAGAGAGAGAG+AGG | - | chr2_3:36657849-36657868 | None:intergenic | 50.0% | |
| CGATCCTTGACTAGTGAGTG+TGG | + | chr2_3:36658365-36658384 | Msa0290050:intron | 50.0% | |
| GGTTGCCTTGAATCTGGATG+TGG | + | chr2_3:36659052-36659071 | Msa0290050:CDS | 50.0% | |
| TCCAGCCACATCCAGATTCA+AGG | - | chr2_3:36659060-36659079 | None:intergenic | 50.0% | |
| GTTGAGATGGGTGGATGCAA+AGG | + | chr2_3:36659240-36659259 | Msa0290050:CDS | 50.0% | |
| TATTGCTACCCTCCCCTTAG+AGG | + | chr2_3:36659678-36659697 | Msa0290050:intron | 50.0% | |
| CATGATAGCACGCAGAAAGC+TGG | - | chr2_3:36659777-36659796 | None:intergenic | 50.0% | |
| AGATGCGCTTGTCTGGAAGA+AGG | - | chr2_3:36660713-36660732 | None:intergenic | 50.0% | |
| CAAAAGCGAGCCCTTGTGAT+CGG | + | chr2_3:36661156-36661175 | Msa0290050:CDS | 50.0% | |
| TATTCCCCCTCCGATCACAA+GGG | - | chr2_3:36661169-36661188 | None:intergenic | 50.0% | |
| ! | TGGCATAATTCGGGCTCTGA+AGG | + | chr2_3:36661221-36661240 | Msa0290050:CDS | 50.0% |
| !! | AATTCGGGCTCTGAAGGAGA+AGG | + | chr2_3:36661227-36661246 | Msa0290050:CDS | 50.0% |
| CACATCTATGTGAGGAGAGG+AGG | + | chr2_3:36661407-36661426 | Msa0290050:CDS | 50.0% | |
| ! | AGAGCACTTGGGGAGGAAAT+TGG | + | chr2_3:36661461-36661480 | Msa0290050:CDS | 50.0% |
| GGACCTGAAGCAACAATGAC+TGG | + | chr2_3:36661590-36661609 | Msa0290050:CDS | 50.0% | |
| AAGCAGAAGCAGTGATGCAC+TGG | - | chr2_3:36661634-36661653 | None:intergenic | 50.0% | |
| GCCTTGAATCTGGATGTGGC+TGG | + | chr2_3:36659056-36659075 | Msa0290050:CDS | 55.0% | |
| TGGACTATGGTAGCTGGAGG+AGG | + | chr2_3:36660769-36660788 | Msa0290050:CDS | 55.0% | |
| AGAATACAGCGGTGCACCCA+AGG | + | chr2_3:36660956-36660975 | Msa0290050:CDS | 55.0% | |
| TGCAAGACCTCGCCTTCCTT+GGG | - | chr2_3:36660975-36660994 | None:intergenic | 55.0% | |
| TGCGCAACTGCGAATCCTGA+TGG | + | chr2_3:36661132-36661151 | Msa0290050:CDS | 55.0% | |
| !! | AGGGCTCGCTTTTGTCCATC+AGG | - | chr2_3:36661150-36661169 | None:intergenic | 55.0% |
| CTATTCCCCCTCCGATCACA+AGG | - | chr2_3:36661170-36661189 | None:intergenic | 55.0% | |
| GGAGGTCCCAACTACCAAAG+AGG | + | chr2_3:36661425-36661444 | Msa0290050:CDS | 55.0% | |
| TACAGCGGTGCACCCAAGGA+AGG | + | chr2_3:36660960-36660979 | Msa0290050:CDS | 60.0% | |
| CTGCAAGACCTCGCCTTCCT+TGG | - | chr2_3:36660976-36660995 | None:intergenic | 60.0% | |
| AAGCGAGCCCTTGTGATCGG+AGG | + | chr2_3:36661159-36661178 | Msa0290050:CDS | 60.0% | |
| AGCGAGCCCTTGTGATCGGA+GGG | + | chr2_3:36661160-36661179 | Msa0290050:CDS | 60.0% | |
| GCGAGCCCTTGTGATCGGAG+GGG | + | chr2_3:36661161-36661180 | Msa0290050:CDS | 65.0% | |
| CGAGCCCTTGTGATCGGAGG+GGG | + | chr2_3:36661162-36661181 | Msa0290050:CDS | 65.0% | |
| CGGTGCACCCAAGGAAGGCG+AGG | + | chr2_3:36660965-36660984 | Msa0290050:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 36657694 | 36662040 | 36657694 | ID=Msa0290050;Name=Msa0290050 |
| chr2_3 | mRNA | 36657694 | 36662040 | 36657694 | ID=Msa0290050-mRNA-1;Parent=Msa0290050;Name=Msa0290050-mRNA-1;_AED=0.11;_eAED=0.11;_QI=210|0.90|1|1|0.90|0.83|12|385|396 |
| chr2_3 | exon | 36657694 | 36657868 | 36657694 | ID=Msa0290050-mRNA-1:exon:11976;Parent=Msa0290050-mRNA-1 |
| chr2_3 | exon | 36658032 | 36658165 | 36658032 | ID=Msa0290050-mRNA-1:exon:11977;Parent=Msa0290050-mRNA-1 |
| chr2_3 | exon | 36658939 | 36659115 | 36658939 | ID=Msa0290050-mRNA-1:exon:11978;Parent=Msa0290050-mRNA-1 |
| chr2_3 | exon | 36659240 | 36659401 | 36659240 | ID=Msa0290050-mRNA-1:exon:11979;Parent=Msa0290050-mRNA-1 |
| chr2_3 | exon | 36659997 | 36660048 | 36659997 | ID=Msa0290050-mRNA-1:exon:11980;Parent=Msa0290050-mRNA-1 |
| chr2_3 | exon | 36660161 | 36660275 | 36660161 | ID=Msa0290050-mRNA-1:exon:11981;Parent=Msa0290050-mRNA-1 |
| chr2_3 | exon | 36660409 | 36660490 | 36660409 | ID=Msa0290050-mRNA-1:exon:11982;Parent=Msa0290050-mRNA-1 |
| chr2_3 | exon | 36660721 | 36660816 | 36660721 | ID=Msa0290050-mRNA-1:exon:11983;Parent=Msa0290050-mRNA-1 |
| chr2_3 | exon | 36660915 | 36661016 | 36660915 | ID=Msa0290050-mRNA-1:exon:11984;Parent=Msa0290050-mRNA-1 |
| chr2_3 | exon | 36661132 | 36661248 | 36661132 | ID=Msa0290050-mRNA-1:exon:11985;Parent=Msa0290050-mRNA-1 |
| chr2_3 | exon | 36661380 | 36661496 | 36661380 | ID=Msa0290050-mRNA-1:exon:11986;Parent=Msa0290050-mRNA-1 |
| chr2_3 | exon | 36661584 | 36662040 | 36661584 | ID=Msa0290050-mRNA-1:exon:11987;Parent=Msa0290050-mRNA-1 |
| chr2_3 | five_prime_UTR | 36657694 | 36657868 | 36657694 | ID=Msa0290050-mRNA-1:five_prime_utr;Parent=Msa0290050-mRNA-1 |
| chr2_3 | five_prime_UTR | 36658032 | 36658066 | 36658032 | ID=Msa0290050-mRNA-1:five_prime_utr;Parent=Msa0290050-mRNA-1 |
| chr2_3 | CDS | 36658067 | 36658165 | 36658067 | ID=Msa0290050-mRNA-1:cds;Parent=Msa0290050-mRNA-1 |
| chr2_3 | CDS | 36658939 | 36659115 | 36658939 | ID=Msa0290050-mRNA-1:cds;Parent=Msa0290050-mRNA-1 |
| chr2_3 | CDS | 36659240 | 36659401 | 36659240 | ID=Msa0290050-mRNA-1:cds;Parent=Msa0290050-mRNA-1 |
| chr2_3 | CDS | 36659997 | 36660048 | 36659997 | ID=Msa0290050-mRNA-1:cds;Parent=Msa0290050-mRNA-1 |
| chr2_3 | CDS | 36660161 | 36660275 | 36660161 | ID=Msa0290050-mRNA-1:cds;Parent=Msa0290050-mRNA-1 |
| chr2_3 | CDS | 36660409 | 36660490 | 36660409 | ID=Msa0290050-mRNA-1:cds;Parent=Msa0290050-mRNA-1 |
| chr2_3 | CDS | 36660721 | 36660816 | 36660721 | ID=Msa0290050-mRNA-1:cds;Parent=Msa0290050-mRNA-1 |
| chr2_3 | CDS | 36660915 | 36661016 | 36660915 | ID=Msa0290050-mRNA-1:cds;Parent=Msa0290050-mRNA-1 |
| chr2_3 | CDS | 36661132 | 36661248 | 36661132 | ID=Msa0290050-mRNA-1:cds;Parent=Msa0290050-mRNA-1 |
| chr2_3 | CDS | 36661380 | 36661496 | 36661380 | ID=Msa0290050-mRNA-1:cds;Parent=Msa0290050-mRNA-1 |
| chr2_3 | CDS | 36661584 | 36661655 | 36661584 | ID=Msa0290050-mRNA-1:cds;Parent=Msa0290050-mRNA-1 |
| chr2_3 | three_prime_UTR | 36661656 | 36662040 | 36661656 | ID=Msa0290050-mRNA-1:three_prime_utr;Parent=Msa0290050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
