AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0291000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291000 MtrunA17_Chr2g0322691 96.667 930 31 0 1 930 1 930 0.0 1855
Msa0291000 MtrunA17_Chr3g0144141 54.646 904 383 9 32 931 70 950 0.0 994
Msa0291000 MtrunA17_Chr8g0370261 51.929 907 413 7 20 921 18 906 0.0 972
Msa0291000 MtrunA17_Chr5g0407171 50.706 921 432 8 6 919 2 907 0.0 946
Msa0291000 MtrunA17_Chr2g0322681 49.616 911 447 8 6 912 1 903 0.0 904
Msa0291000 MtrunA17_Chr8g0370281 51.852 837 370 7 99 918 1 821 0.0 840
Msa0291000 MtrunA17_Chr3g0136621 35.301 881 533 20 9 862 9 879 5.25e-160 495
Msa0291000 MtrunA17_Chr3g0136611 33.262 938 576 22 15 927 14 926 7.04e-154 479
Msa0291000 MtrunA17_Chr4g0046101 32.432 851 491 23 32 852 36 832 6.69e-131 416
Msa0291000 MtrunA17_Chr2g0283231 30.907 948 548 30 10 925 14 886 4.85e-125 401
Msa0291000 MtrunA17_Chr2g0283261 28.046 870 530 25 16 859 17 816 9.11e-98 327
Msa0291000 MtrunA17_Chr5g0424541 29.953 858 512 27 31 851 33 838 2.25e-95 321
Msa0291000 MtrunA17_Chr2g0283241 27.797 867 536 23 14 859 14 811 1.30e-93 317
Msa0291000 MtrunA17_Chr5g0424521 30.559 733 432 22 101 805 7 690 1.64e-83 283
Msa0291000 MtrunA17_Chr7g0230081 26.531 882 523 30 34 864 48 855 1.56e-77 272
Msa0291000 MtrunA17_Chr2g0283251 27.426 773 476 24 32 783 32 740 3.39e-76 265
Msa0291000 MtrunA17_Chr7g0230091 29.936 628 351 18 247 851 6 567 4.96e-75 259
Msa0291000 MtrunA17_Chr2g0283211 29.431 615 333 18 187 786 2 530 1.50e-69 241
Msa0291000 MtrunA17_Chr6g0467751 33.915 401 242 10 473 853 46 443 7.59e-64 223
Msa0291000 MtrunA17_Chr5g0424621 27.125 553 328 22 31 553 33 540 7.89e-35 140
Msa0291000 MtrunA17_Chr8g0370291 42.254 71 40 1 29 98 22 92 1.21e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291000 AT1G05200.6 67.691 879 278 4 34 909 57 932 0.0 1263
Msa0291000 AT1G05200.2 67.691 879 278 4 34 909 57 932 0.0 1263
Msa0291000 AT1G05200.1 67.691 879 278 4 34 909 57 932 0.0 1263
Msa0291000 AT2G32390.5 65.490 878 297 3 38 909 48 925 0.0 1187
Msa0291000 AT1G05200.7 69.180 756 227 2 34 785 57 810 0.0 1118
Msa0291000 AT1G05200.3 69.180 756 227 2 34 785 57 810 0.0 1118
Msa0291000 AT2G32390.2 66.261 821 271 3 95 909 3 823 0.0 1118
Msa0291000 AT2G32390.1 66.056 819 272 3 97 909 49 867 0.0 1113
Msa0291000 AT1G42540.1 54.989 902 388 10 30 925 21 910 0.0 1004
Msa0291000 AT1G42540.4 54.989 902 388 10 30 925 21 910 0.0 1004
Msa0291000 AT1G42540.2 54.989 902 388 10 30 925 21 910 0.0 1004
Msa0291000 AT3G51480.4 51.198 918 418 8 9 925 5 893 0.0 957
Msa0291000 AT3G51480.1 51.198 918 418 8 9 925 5 893 0.0 957
Msa0291000 AT4G35290.4 53.231 913 398 11 23 923 11 906 0.0 953
Msa0291000 AT4G35290.3 53.231 913 398 11 23 923 11 906 0.0 953
Msa0291000 AT4G35290.1 53.231 913 398 11 23 923 11 906 0.0 953
Msa0291000 AT4G35290.2 53.231 913 398 11 23 923 11 906 0.0 953
Msa0291000 AT4G35290.5 53.231 913 398 11 23 923 11 906 0.0 953
Msa0291000 AT2G17260.1 53.032 907 389 13 32 924 28 911 0.0 944
Msa0291000 AT1G05200.4 67.857 616 196 1 34 649 57 670 0.0 902
Msa0291000 AT3G51480.2 52.778 828 365 7 99 925 1 803 0.0 896
Msa0291000 AT2G32390.6 67.419 620 198 1 38 653 48 667 0.0 890
Msa0291000 AT1G05200.5 67.940 602 191 1 34 635 57 656 0.0 882
Msa0291000 AT2G32390.4 66.613 617 202 1 38 650 48 664 0.0 878
Msa0291000 AT2G32390.3 66.613 617 202 1 38 650 48 664 0.0 878
Msa0291000 AT2G32390.7 66.611 602 197 1 38 635 48 649 0.0 854
Msa0291000 AT3G51480.3 53.428 773 347 5 9 781 5 764 0.0 851
Msa0291000 AT4G35290.6 54.297 768 335 7 23 781 11 771 0.0 823
Msa0291000 AT2G32400.1 45.111 900 469 9 22 912 15 898 0.0 815
Msa0291000 AT1G42540.3 54.267 621 275 7 30 644 21 638 0.0 699
Msa0291000 AT2G29120.1 36.686 875 495 16 3 862 18 848 1.29e-162 501
Msa0291000 AT5G11210.9 35.294 799 493 12 90 879 7 790 3.23e-157 483
Msa0291000 AT5G11210.1 35.086 818 504 14 74 879 12 814 5.28e-157 483
Msa0291000 AT5G11180.2 34.282 843 505 16 38 856 36 853 1.17e-156 486
Msa0291000 AT5G11210.5 35.086 818 504 14 74 879 70 872 2.84e-156 483
Msa0291000 AT2G29100.1 34.921 882 512 19 9 872 7 844 3.63e-152 473
Msa0291000 AT2G29100.2 34.921 882 512 19 9 872 9 846 4.44e-152 473
Msa0291000 AT2G24720.1 36.000 750 446 14 95 829 88 818 2.99e-150 468
Msa0291000 AT2G24710.1 33.896 829 505 17 91 894 83 893 8.47e-149 463
Msa0291000 AT2G24710.3 33.896 829 505 17 91 894 107 917 1.07e-148 464
Msa0291000 AT5G27100.1 35.733 778 459 16 95 854 88 842 1.15e-148 463
Msa0291000 AT2G29110.1 35.731 862 502 19 9 854 10 835 6.59e-148 462
Msa0291000 AT2G29110.2 35.731 862 502 19 9 854 11 836 6.91e-148 462
Msa0291000 AT5G11210.3 36.888 694 415 11 96 781 21 699 1.28e-145 449
Msa0291000 AT5G11210.8 36.429 700 422 11 90 781 7 691 7.29e-145 447
Msa0291000 AT5G11210.7 36.429 700 422 11 90 781 7 691 9.26e-145 447
Msa0291000 AT5G11210.6 36.429 700 422 11 90 781 7 691 9.26e-145 447
Msa0291000 AT5G11210.10 37.179 702 413 13 91 781 89 773 5.02e-144 447
Msa0291000 AT5G11210.2 36.714 700 419 12 91 781 89 773 5.68e-144 447
Msa0291000 AT5G11210.4 36.714 700 419 12 91 781 89 773 5.68e-144 447
Msa0291000 AT4G31710.1 36.782 783 448 17 96 861 89 841 1.01e-141 444
Msa0291000 AT4G31710.2 36.143 783 446 17 96 861 112 857 1.27e-137 434
Msa0291000 AT2G24710.2 35.511 704 423 14 91 781 107 792 1.83e-136 428
Msa0291000 AT5G11180.1 31.473 842 469 18 38 856 36 792 4.45e-125 401
Msa0291000 AT3G07520.1 30.390 872 519 24 9 856 12 819 3.14e-101 336
Msa0291000 AT5G48400.2 26.978 834 531 18 38 856 40 810 5.18e-93 314
Msa0291000 AT5G48410.1 27.421 857 541 22 38 883 42 828 1.10e-90 307
Msa0291000 AT5G48400.1 26.614 759 481 17 38 781 40 737 3.06e-81 279
Msa0291000 AT3G04110.1 26.722 842 503 22 38 851 30 785 3.71e-81 280
Msa0291000 AT5G48410.2 27.285 755 476 19 38 781 42 734 1.74e-80 277
Msa0291000 AT5G48410.4 26.254 857 524 22 38 883 42 801 1.54e-77 270
Msa0291000 AT5G48410.3 26.138 857 521 22 38 883 42 797 7.00e-75 263
Msa0291000 AT3G04110.3 26.544 761 456 20 38 781 30 704 6.00e-72 253
Msa0291000 AT3G04110.2 25.416 842 486 22 38 851 30 757 8.54e-69 245
Msa0291000 AT5G11210.11 37.346 324 199 4 532 852 15 337 4.25e-66 228

Find 218 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAAACAGAACAAGGATTT+TGG 0.111436 2_3:-39136876 Msa0291000:CDS
TTTGAGCAGTGAATGGTTTA+AGG 0.173210 2_3:+39136774 None:intergenic
ACAAATTGCAGTGGATTTAT+TGG 0.178126 2_3:-39138933 Msa0291000:CDS
GCTAAATAGTGTGAACTTAA+TGG 0.185005 2_3:-39138051 Msa0291000:CDS
AGACCAACTGTTGTGAAAAT+TGG 0.195940 2_3:-39139083 Msa0291000:CDS
AACTCTCTCTTAAAAGCTTC+TGG 0.200609 2_3:-39135641 Msa0291000:CDS
CTCAAAGGCTTTCCATTGTT+TGG 0.206550 2_3:+39137309 None:intergenic
AATGAAGTTGTGGCTATAAT+TGG 0.217187 2_3:-39139125 Msa0291000:CDS
TATTCTTCCTGGTATTAAAA+TGG 0.225028 2_3:-39138973 Msa0291000:CDS
ATGTACCTCTTCTTTCATTT+GGG 0.227977 2_3:-39138331 Msa0291000:CDS
CATGTACCTCTTCTTTCATT+TGG 0.229059 2_3:-39138332 Msa0291000:CDS
TCCAAAATCCTTGTTCTGTT+TGG 0.230043 2_3:+39136875 None:intergenic
TGAGTTCTGGTGTTGGTTTA+AGG 0.236614 2_3:-39139245 Msa0291000:five_prime_UTR
TATTTAGATTCCATCCTTCT+TGG 0.245159 2_3:-39135225 Msa0291000:three_prime_UTR
CTACCTCGAGTTTGTTTCTA+AGG 0.255135 2_3:-39137262 Msa0291000:CDS
CCAAAATCCTTGTTCTGTTT+GGG 0.258528 2_3:+39136876 None:intergenic
ACTCAACCTTTCATGGAATC+AGG 0.270280 2_3:-39136848 Msa0291000:CDS
ATTCTTCAACTCTCAGAAAA+TGG 0.277745 2_3:-39135741 Msa0291000:CDS
TTGGAATACCTTACCTTGAT+TGG 0.295410 2_3:-39139517 Msa0291000:five_prime_UTR
ACATCGGTGAATCTGGTTTC+CGG 0.298014 2_3:-39137485 Msa0291000:CDS
AACTTGCATCATGTATAAAT+AGG 0.301524 2_3:+39139700 None:intergenic
AGTCATCATTCCAAGATTCT+TGG 0.302144 2_3:+39137968 None:intergenic
GGGATAAGGCAACAAGTTTA+TGG 0.302251 2_3:+39137188 None:intergenic
GATTGTCATAATTTGCTTCC+TGG 0.305338 2_3:+39136661 None:intergenic
GTTTCCGGAGAGTCGGTTAT+TGG 0.309022 2_3:-39137470 Msa0291000:CDS
AGCAAATTATGACAATCTTT+TGG 0.314822 2_3:-39136655 Msa0291000:intron
CAAAGACTTGATTGTATTTG+TGG 0.316787 2_3:-39135454 Msa0291000:CDS
AAGAATCCACCAGGAGTTAA+AGG 0.316821 2_3:-39137237 Msa0291000:CDS
CTACAGCCAGCTTGTTAATC+AGG 0.316988 2_3:-39137118 Msa0291000:CDS
ATCCTTAACATCGGTGAATC+TGG 0.317171 2_3:-39137492 Msa0291000:CDS
ATTATAGCCACAACTTCATT+TGG 0.318223 2_3:+39139128 None:intergenic
GGATTTCACTCAACCTTTCA+TGG 0.322099 2_3:-39136855 Msa0291000:CDS
TCAAAGGCTTTCCATTGTTT+GGG 0.322840 2_3:+39137310 None:intergenic
TTTACTATTGCCAAGAATCT+TGG 0.334414 2_3:-39137978 Msa0291000:CDS
GAAAACACTGTGAGTGGTCT+TGG 0.336437 2_3:-39136389 Msa0291000:CDS
CCGCGACAATATATATTATT+CGG 0.337276 2_3:-39137162 Msa0291000:CDS
TCCTTCAAAGTTGGATTCAA+TGG 0.338078 2_3:-39137913 Msa0291000:CDS
ACTTGACAGGTGTTGAGTTC+TGG 0.342444 2_3:-39139258 Msa0291000:intron
TGCGTGGTTCGGACAAAATA+TGG 0.351432 2_3:+39138275 None:intergenic
TGATGTAGCTTTGCAGTTGA+TGG 0.355073 2_3:-39138432 Msa0291000:intron
AATATATATTGTCGCGGAAC+GGG 0.362665 2_3:+39137168 None:intergenic
TTCAAGGTGTTGTAGCTTTG+AGG 0.370685 2_3:-39137860 Msa0291000:CDS
TATTGTCGCGGAACGGGATA+AGG 0.373051 2_3:+39137174 None:intergenic
ATGGAGGTGTTAGGAGTAAA+GGG 0.377419 2_3:-39139182 Msa0291000:CDS
TTCAATGTGTTAGTATCAAC+TGG 0.379645 2_3:+39137888 None:intergenic
TGGGGTCTCTTTCTTATATG+TGG 0.379860 2_3:-39135621 Msa0291000:CDS
GCTAATAAGACTATTCTTCC+TGG 0.382556 2_3:-39138984 Msa0291000:CDS
GACATAAAGAGTTCAATATA+AGG 0.383153 2_3:+39136065 None:intergenic
TTTACTGTTGATTCTGTGAT+TGG 0.383641 2_3:-39139053 Msa0291000:CDS
CTCCATTCGGTCCACGCGTA+AGG 0.385447 2_3:+39136117 None:intergenic
TGGTTGCTTATTGAAGTGTT+AGG 0.387184 2_3:+39137393 None:intergenic
AGACAATTTGATTCTTGAAA+AGG 0.387607 2_3:-39139823 Msa0291000:five_prime_UTR
GGAGATTTGTGCTAATCATA+TGG 0.392311 2_3:-39136367 Msa0291000:CDS
ATACTACAGCACCAACAAAA+AGG 0.393770 2_3:+39136726 None:intergenic
ATGGAAACTGCAGAGAAGAT+AGG 0.402701 2_3:+39138294 None:intergenic
CTCAATGAAACTATCCTAGA+TGG 0.403452 2_3:+39136164 None:intergenic
ATGATGCAAGTTTAGCTTTG+AGG 0.404656 2_3:-39139689 Msa0291000:five_prime_UTR
TATATTGAACTCTTTATGTC+TGG 0.404663 2_3:-39136062 Msa0291000:CDS
TATATGCATATGATTCTGTT+TGG 0.404993 2_3:-39137743 Msa0291000:CDS
AACCAGATTCACCGATGTTA+AGG 0.407729 2_3:+39137490 None:intergenic
GCTCAAATGTGGTGTGTTAC+CGG 0.411160 2_3:-39136758 Msa0291000:CDS
GAGAAATAAAGGAGATACTT+AGG 0.417888 2_3:-39135419 Msa0291000:CDS
GGTCTCTTGTACAAAACTTC+AGG 0.418242 2_3:+39137417 None:intergenic
TGTGTTCACTAAAAGTGGTT+GGG 0.422992 2_3:-39136009 Msa0291000:CDS
TCAACTTCCATCTCACTCCC+TGG 0.423289 2_3:+39135531 None:intergenic
AATAGTCGCTGTGCGTGGTT+CGG 0.425644 2_3:+39138264 None:intergenic
ATATCAGGTAATCAACCAAT+TGG 0.427826 2_3:-39136242 Msa0291000:CDS
ATTGTCATAATTTGCTTCCT+GGG 0.434062 2_3:+39136662 None:intergenic
GGAATTGACAGCTTGATATC+AGG 0.434188 2_3:-39136257 Msa0291000:CDS
GGATTTATTGGAACAGTTGA+AGG 0.435584 2_3:-39138921 Msa0291000:intron
CACCACATTTGAGCAGTGAA+TGG 0.435645 2_3:+39136767 None:intergenic
AGATTGGCTTCCTTCAAAGT+TGG 0.435793 2_3:-39137922 Msa0291000:CDS
ACTCTCTCTTAAAAGCTTCT+GGG 0.443262 2_3:-39135640 Msa0291000:CDS
CTTGATTTGATCTCCTTGAC+AGG 0.444431 2_3:+39136809 None:intergenic
CAGAACTTTGATGCAGCTGT+TGG 0.449103 2_3:-39136914 Msa0291000:CDS
AATGAAGTGATTGCCACAAT+TGG 0.450571 2_3:-39138407 Msa0291000:CDS
TAGCAAGGGGAGAGTCCCTC+TGG 0.451698 2_3:+39135781 None:intergenic
TGCAAAAGATCCACGACAAA+TGG 0.451961 2_3:-39135713 Msa0291000:CDS
AATGGAGGTGTTAGGAGTAA+AGG 0.453081 2_3:-39139183 Msa0291000:CDS
ATATATATTGTTATTTACTT+AGG 0.455659 2_3:+39135335 None:intergenic
GTTCATGTTAATCCCGATCA+TGG 0.457387 2_3:-39138011 Msa0291000:CDS
TCCATTGAATCCAACTTTGA+AGG 0.458795 2_3:+39137912 None:intergenic
GACCCGTCTTGAATTCCAAT+TGG 0.460990 2_3:+39136227 None:intergenic
AGATTCCATCCTTCTTGGCT+AGG 0.464490 2_3:-39135220 Msa0291000:three_prime_UTR
CAGCTATCCTCACAAATTGA+AGG 0.465339 2_3:-39136278 Msa0291000:CDS
CTGAAACAGTATTAATAAGT+AGG 0.469008 2_3:+39139554 None:intergenic
AACACATTGAAACTCCTTCA+AGG 0.469576 2_3:-39137876 Msa0291000:CDS
GACGATGATTATGGAAGAAA+CGG 0.471966 2_3:-39138173 Msa0291000:CDS
TACAAAGCCGCATTATCTCC+TGG 0.474815 2_3:-39138101 Msa0291000:CDS
CAAGATACTGATATCATCCT+TGG 0.475113 2_3:+39138073 None:intergenic
AGGGCGTCCTCATATACCTT+TGG 0.477099 2_3:+39136137 None:intergenic
ATATCATCCTTGGTGGCTCC+AGG 0.478602 2_3:+39138083 None:intergenic
AAAATATTCAAACCATGATC+GGG 0.480624 2_3:+39137999 None:intergenic
AAAACACTGTGAGTGGTCTT+GGG 0.485893 2_3:-39136388 Msa0291000:CDS
CTTGATGCTTTACTCAAAGA+AGG 0.487442 2_3:-39137705 Msa0291000:CDS
TCAAAGCTACAACACCTTGA+AGG 0.494588 2_3:+39137862 None:intergenic
CAGGTGTTGAGTTCTGGTGT+TGG 0.498356 2_3:-39139252 Msa0291000:five_prime_UTR
CTCAACCTTTCATGGAATCA+GGG 0.499064 2_3:-39136847 Msa0291000:CDS
ACCTTTCATGGAATCAGGGC+TGG 0.503020 2_3:-39136843 Msa0291000:CDS
TTAGGCAGAAGAGTAAGAAA+AGG 0.503056 2_3:-39135401 Msa0291000:CDS
AGGAGATCAAATCAAGCCCT+TGG 0.503218 2_3:-39136802 Msa0291000:CDS
CAACTTCCATCTCACTCCCT+GGG 0.506695 2_3:+39135532 None:intergenic
TTTGGGAAAACCCATCCTCT+TGG 0.509537 2_3:+39137327 None:intergenic
ACGCGTGGACCGAATGGAGG+AGG 0.509621 2_3:-39136113 Msa0291000:CDS
TTAACAAGCTGGCTGTAGTC+GGG 0.509830 2_3:+39137123 None:intergenic
TGTACCTCTTCTTTCATTTG+GGG 0.512564 2_3:-39138330 Msa0291000:CDS
TCTTGAGCACAGGCACAATC+CGG 0.513255 2_3:-39136699 Msa0291000:CDS
TAGACCAATAACCGACTCTC+CGG 0.515792 2_3:+39137466 None:intergenic
ATGTGTGGATTGCAACAGAT+TGG 0.517566 2_3:-39137938 Msa0291000:CDS
AACTCAATATACAACCATCT+AGG 0.518450 2_3:-39136178 Msa0291000:CDS
GTCTTGAAAGCCATTTGTCG+TGG 0.519858 2_3:+39135703 None:intergenic
GTGTTCACTAAAAGTGGTTG+GGG 0.519933 2_3:-39136008 Msa0291000:CDS
GGTAGTTGTTGTTCCTGTCA+AGG 0.521207 2_3:-39136822 Msa0291000:CDS
GGTGTAGCTATAGTTTCTCC+AGG 0.521581 2_3:+39137348 None:intergenic
TGGAAACTGCAGAGAAGATA+GGG 0.522263 2_3:+39138295 None:intergenic
ATTAACAAGCTGGCTGTAGT+CGG 0.522679 2_3:+39137122 None:intergenic
GTCATAATTTGCTTCCTGGG+TGG 0.524462 2_3:+39136665 None:intergenic
GCTACAACCCCTCCTCCATT+CGG 0.524506 2_3:+39136104 None:intergenic
GTCAATTCCTTCAATTTGTG+AGG 0.524687 2_3:+39136271 None:intergenic
TCCATTCGGTCCACGCGTAA+GGG 0.524711 2_3:+39136118 None:intergenic
ATGCAATAGCCTTTAACTCC+TGG 0.525831 2_3:+39137228 None:intergenic
TAATATATATTGTCGCGGAA+CGG 0.526877 2_3:+39137167 None:intergenic
GTGCAACCTGATTAACAAGC+TGG 0.527712 2_3:+39137112 None:intergenic
GAGAGATCCAAAGGTATATG+AGG 0.527797 2_3:-39136144 Msa0291000:CDS
GGAAATGTGTTCACTAAAAG+TGG 0.528776 2_3:-39136014 Msa0291000:CDS
GCCCTTACGCGTGGACCGAA+TGG 0.528919 2_3:-39136119 Msa0291000:CDS
CCTAAGCTGATTGACACAAA+AGG 0.532905 2_3:-39137657 Msa0291000:CDS
CAAACTGATCATCTAAGCTC+TGG 0.532998 2_3:+39135370 None:intergenic
TAGCTGCTGCACTGTGAGGA+TGG 0.533117 2_3:+39136295 None:intergenic
AACTGCAAGTTCAGAACCGT+TGG 0.537171 2_3:-39136035 Msa0291000:CDS
AAGACGGGTCATTTGCAAGA+AGG 0.537649 2_3:-39136214 Msa0291000:CDS
GAATCTGGTTTCCGGAGAGT+CGG 0.539476 2_3:-39137477 Msa0291000:CDS
TATATAAACCAATCAAGGTA+AGG 0.539950 2_3:+39139509 None:intergenic
CAATAATTTCCTAGCCAAGA+AGG 0.540497 2_3:+39135211 None:intergenic
TACAAATTTAATATGCATGT+GGG 0.540698 2_3:-39139596 Msa0291000:five_prime_UTR
AGCTATATATAAACCAATCA+AGG 0.541022 2_3:+39139504 None:intergenic
CAATTGTCCCAAACAGAACA+AGG 0.541430 2_3:-39136883 Msa0291000:CDS
GGAGATCAAATCAAGCCCTT+GGG 0.544302 2_3:-39136801 Msa0291000:CDS
ATATTGTTATTTACTTAGGT+AGG 0.545707 2_3:+39135339 None:intergenic
TCTAGGTTGAAGAACGCAAA+CGG 0.545787 2_3:-39137798 Msa0291000:CDS
CTGGGTGGACCTCGGAACTC+CGG 0.547905 2_3:+39136680 None:intergenic
GAGTGAGATGGAAGTTGACC+AGG 0.550105 2_3:-39135526 Msa0291000:CDS
AGGAGCTAAAACTGATAGAC+CGG 0.551583 2_3:+39137437 None:intergenic
CTATAGCTACACCAAGAGGA+TGG 0.554528 2_3:-39137338 Msa0291000:CDS
AAAAGTGTAGGGAGAAAGTC+CGG 0.554930 2_3:+39137591 None:intergenic
ACAATTGGTCCACAATCCTC+AGG 0.555615 2_3:-39138392 Msa0291000:CDS
AAGTTCATTCTCAAAAGTGT+AGG 0.556972 2_3:+39137579 None:intergenic
TAAAGTCTTGATCATGCTCA+TGG 0.558196 2_3:-39139440 Msa0291000:five_prime_UTR
TTGTTATTTACTTAGGTAGG+TGG 0.558818 2_3:+39135342 None:intergenic
AACGGTTCTGAACTTGCAGT+TGG 0.559033 2_3:+39136037 None:intergenic
TAGTATGGATTCTTGAGCAC+AGG 0.559377 2_3:-39136709 Msa0291000:CDS
CAACCAATTGGAATTCAAGA+CGG 0.561704 2_3:-39136230 Msa0291000:CDS
AACCAATTGGAATTCAAGAC+GGG 0.564447 2_3:-39136229 Msa0291000:CDS
CAATATATATTATTCGGAGA+TGG 0.566628 2_3:-39137156 Msa0291000:CDS
ATGTGTTCACTAAAAGTGGT+TGG 0.569973 2_3:-39136010 Msa0291000:CDS
CAATAGCCTTTAACTCCTGG+TGG 0.570495 2_3:+39137231 None:intergenic
ACCAGCCCTGATTCCATGAA+AGG 0.571061 2_3:+39136842 None:intergenic
CGGAGTTCCGAGGTCCACCC+AGG 0.572905 2_3:-39136679 Msa0291000:CDS
TGAGCTATTCCTGAGGATTG+TGG 0.573695 2_3:+39138383 None:intergenic
TTTGCTTCCTGGGTGGACCT+CGG 0.574116 2_3:+39136672 None:intergenic
ATGTTAAGGATATCATATGA+TGG 0.574140 2_3:+39137504 None:intergenic
TTTCATGATACAAATTGCAG+TGG 0.576132 2_3:-39138942 Msa0291000:CDS
CGCGTGGACCGAATGGAGGA+GGG 0.576233 2_3:-39136112 Msa0291000:CDS
TGAGGCACTGCTATTCTCAA+AGG 0.576248 2_3:+39137294 None:intergenic
ATGAACTTCACTGGTTTGAG+TGG 0.577802 2_3:-39137564 Msa0291000:CDS
GTGGATTCCAAATGAAGTTG+TGG 0.579560 2_3:-39139135 Msa0291000:CDS
TTACAAATTTAATATGCATG+TGG 0.581326 2_3:-39139597 Msa0291000:five_prime_UTR
AGAAACGGAATTTCAATACT+CGG 0.581527 2_3:-39138158 Msa0291000:CDS
CAATACATGAAATTCATCCC+AGG 0.584069 2_3:-39135549 Msa0291000:CDS
TGAGGATTGTGGACCAATTG+TGG 0.585224 2_3:+39138394 None:intergenic
CTCTCTCTTAAAAGCTTCTG+GGG 0.586457 2_3:-39135639 Msa0291000:CDS
AGTTCATTCTCAAAAGTGTA+GGG 0.586570 2_3:+39137580 None:intergenic
CAGTTGACATATCAATAGCA+AGG 0.587284 2_3:+39135766 None:intergenic
AATTTCCTAGCCAAGAAGGA+TGG 0.587720 2_3:+39135215 None:intergenic
AGTTTCATTGAGAGATCCAA+AGG 0.593132 2_3:-39136153 Msa0291000:CDS
GGTTATTGGTCTAATTACTC+CGG 0.594786 2_3:-39137456 Msa0291000:CDS
GTTGAAGAACGCAAACGGCA+CGG 0.597011 2_3:-39137793 Msa0291000:CDS
ATTCATCCCAGGGAGTGAGA+TGG 0.599534 2_3:-39135538 Msa0291000:CDS
GATACTGATATCATCCTTGG+TGG 0.600845 2_3:+39138076 None:intergenic
TTTAGTGAACACATTTCCAA+CGG 0.601875 2_3:+39136019 None:intergenic
AACCATTCACTGCTCAAATG+TGG 0.604971 2_3:-39136769 Msa0291000:CDS
TTGCTTATTGAAGTGTTAGG+TGG 0.609190 2_3:+39137396 None:intergenic
TATAGCTACACCAAGAGGAT+GGG 0.610856 2_3:-39137337 Msa0291000:CDS
ACTGCAGAGAAGATAGGGTA+GGG 0.615071 2_3:+39138300 None:intergenic
GATGCTTTACTCAAAGAAGG+TGG 0.616128 2_3:-39137702 Msa0291000:CDS
AGTTGACATATCAATAGCAA+GGG 0.617744 2_3:+39135767 None:intergenic
CAAATGAAAGAAGAGGTACA+TGG 0.620174 2_3:+39138333 None:intergenic
ACAGTATTAATAAGTAGGTG+TGG 0.621841 2_3:+39139559 None:intergenic
CTGAAAATAGTCGCTGTGCG+TGG 0.622773 2_3:+39138259 None:intergenic
AATACATGAAATTCATCCCA+GGG 0.622960 2_3:-39135548 Msa0291000:CDS
CTTACGCGTGGACCGAATGG+AGG 0.623808 2_3:-39136116 Msa0291000:CDS
GTTGCCCCAAATGAAAGAAG+AGG 0.623927 2_3:+39138326 None:intergenic
CCGAATAATATATATTGTCG+CGG 0.627209 2_3:+39137162 None:intergenic
ATTATCTCCTGGAGCCACCA+AGG 0.633029 2_3:-39138090 Msa0291000:CDS
AACTGCAGAGAAGATAGGGT+AGG 0.635877 2_3:+39138299 None:intergenic
AATCTTGGAATGATGACTAG+TGG 0.639163 2_3:-39137963 Msa0291000:CDS
ACAGGAGAAAACACTGTGAG+TGG 0.640886 2_3:-39136395 Msa0291000:intron
GAAACTATAGCTACACCAAG+AGG 0.641101 2_3:-39137342 Msa0291000:CDS
AATGGTTTAAGGAAAGCCCA+AGG 0.642280 2_3:+39136785 None:intergenic
TCATATGATATCCTTAACAT+CGG 0.644656 2_3:-39137501 Msa0291000:CDS
ATGATCACAGGGATTCCAGA+GGG 0.649288 2_3:-39135796 Msa0291000:intron
AGGCACAATCCGGAGTTCCG+AGG 0.650646 2_3:-39136689 Msa0291000:CDS
TCTAAGGACAAGAATCCACC+AGG 0.651159 2_3:-39137246 Msa0291000:CDS
ACCAGGAAAATCCGTCACCT+AGG 0.653912 2_3:-39135509 Msa0291000:CDS
TGATGACTAGTGGTTATGTG+TGG 0.663189 2_3:-39137953 Msa0291000:CDS
GCGTGGACCGAATGGAGGAG+GGG 0.668319 2_3:-39136111 Msa0291000:CDS
AGGATAGCTGCTGCACTGTG+AGG 0.668868 2_3:+39136291 None:intergenic
ATGGTTTAAGGAAAGCCCAA+GGG 0.670983 2_3:+39136786 None:intergenic
TGTCCTTAGAAACAAACTCG+AGG 0.671921 2_3:+39137259 None:intergenic
TATGAGGACGCCCTTACGCG+TGG 0.674186 2_3:-39136128 Msa0291000:CDS
ATTGGAAGATCAGCTCAACA+AGG 0.681994 2_3:-39139035 Msa0291000:CDS
GATGATATGAGCTATTCCTG+AGG 0.688313 2_3:+39138376 None:intergenic
GTTGACATATCAATAGCAAG+GGG 0.698402 2_3:+39135768 None:intergenic
GGTGGCTCCAGGAGATAATG+CGG 0.718412 2_3:+39138094 None:intergenic
TCGAGGTAGCTTATTCTGTG+AGG 0.720996 2_3:+39137276 None:intergenic
GATGCGCTAGCAAAGAAACG+CGG 0.721197 2_3:-39138134 Msa0291000:CDS
CATGATCACAGGGATTCCAG+AGG 0.735472 2_3:-39135797 Msa0291000:intron
TGGCTTTCAAGACAGAACTG+TGG 0.756266 2_3:-39135693 Msa0291000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATATATTTATATTTTGAA+TGG - chr2_3:39136094-39136113 Msa0291000:CDS 10.0%
!!! ATATATATTGTTATTTACTT+AGG + chr2_3:39139578-39139597 None:intergenic 10.0%
!!! TTCTTTTATTTTTGATATTT+TGG - chr2_3:39139616-39139635 Msa0291000:five_prime_UTR 10.0%
!!! AATTCTTAATGTTCAATTTT+AGG - chr2_3:39136029-39136048 Msa0291000:CDS 15.0%
!!! TTCAATTTTAGGTTTAATTT+TGG - chr2_3:39136040-39136059 Msa0291000:CDS 15.0%
!!! TCAATTTTAGGTTTAATTTT+GGG - chr2_3:39136041-39136060 Msa0291000:CDS 15.0%
!! TATCAAAAATAAAAGAAACA+AGG + chr2_3:39139613-39139632 None:intergenic 15.0%
!! TTACAAATTTAATATGCATG+TGG - chr2_3:39135313-39135332 Msa0291000:three_prime_UTR 20.0%
!! TACAAATTTAATATGCATGT+GGG - chr2_3:39135314-39135333 Msa0291000:three_prime_UTR 20.0%
!! TTCTTATTCTATGATATGTT+TGG - chr2_3:39135545-39135564 Msa0291000:CDS 20.0%
!!! CAATTTTAGGTTTAATTTTG+GGG - chr2_3:39136042-39136061 Msa0291000:CDS 20.0%
!!! TCCTTATTTTTTCATTACTT+AGG - chr2_3:39136153-39136172 Msa0291000:CDS 20.0%
!!! TTTTTTTTGTCTTAAACCTT+CGG - chr2_3:39136187-39136206 Msa0291000:CDS 20.0%
!! TAAATTATATCCTATATGAG+AGG + chr2_3:39136378-39136397 None:intergenic 20.0%
!! ATATAGGATATAATTTAGAG+AGG - chr2_3:39136381-39136400 Msa0291000:CDS 20.0%
!!! ACATTGTTGATTTTTATAGA+TGG - chr2_3:39136690-39136709 Msa0291000:CDS 20.0%
!! AAAAATATTCAAACCATGAT+CGG + chr2_3:39136915-39136934 None:intergenic 20.0%
!!! TCAAAAAAAGTTTTTTCTCT+AGG - chr2_3:39137095-39137114 Msa0291000:intron 20.0%
!! AGATACAGCATTTAAATATT+GGG + chr2_3:39137895-39137914 None:intergenic 20.0%
!! TAGATACAGCATTTAAATAT+TGG + chr2_3:39137896-39137915 None:intergenic 20.0%
!!! AGTATTTTTAGCTTAATCAT+TGG - chr2_3:39138280-39138299 Msa0291000:CDS 20.0%
!!! GTATAAATTTCTGATTTTCT+TGG - chr2_3:39138477-39138496 Msa0291000:intron 20.0%
!! TTATGTAACTCTTATGTAAA+GGG - chr2_3:39138978-39138997 Msa0291000:CDS 20.0%
!!! ATATTGTTATTTACTTAGGT+AGG + chr2_3:39139574-39139593 None:intergenic 20.0%
! AACTTGCATCATGTATAAAT+AGG + chr2_3:39135213-39135232 None:intergenic 25.0%
! CTGAAACAGTATTAATAAGT+AGG + chr2_3:39135359-39135378 None:intergenic 25.0%
! TATATAAACCAATCAAGGTA+AGG + chr2_3:39135404-39135423 None:intergenic 25.0%
! AGCTATATATAAACCAATCA+AGG + chr2_3:39135409-39135428 None:intergenic 25.0%
!!! TGGCTTATTTTTTTATATCC+AGG - chr2_3:39135490-39135509 Msa0291000:CDS 25.0%
!!! TTTTTTATATCCAGGTATGT+CGG - chr2_3:39135498-39135517 Msa0291000:CDS 25.0%
!! AATTTTTGCTGATGTTGAAA+AGG - chr2_3:39135625-39135644 Msa0291000:CDS 25.0%
! TATTCTTCCTGGTATTAAAA+TGG - chr2_3:39135937-39135956 Msa0291000:intron 25.0%
!!! ATAACATCCATTTTAATACC+AGG + chr2_3:39135947-39135966 None:intergenic 25.0%
! GCCTAAGTAATGAAAAAATA+AGG + chr2_3:39136157-39136176 None:intergenic 25.0%
! ACCATTAATTGTTTCAGTTA+GGG - chr2_3:39136259-39136278 Msa0291000:CDS 25.0%
!!! TACTAGTCTTAAACTAGAAA+TGG + chr2_3:39136342-39136361 None:intergenic 25.0%
! ATATAATCTTCCTCTCATAT+AGG - chr2_3:39136365-39136384 Msa0291000:CDS 25.0%
! ATTTAGAGAGGAATTTCTTA+TGG - chr2_3:39136393-39136412 Msa0291000:CDS 25.0%
!!! TTGTTGATTTTTATAGATGG+AGG - chr2_3:39136693-39136712 Msa0291000:CDS 25.0%
! ATAATCATCGTCTACAAAAA+TGG + chr2_3:39136729-39136748 None:intergenic 25.0%
!! ATTTTTGTAGACGATGATTA+TGG - chr2_3:39136728-39136747 Msa0291000:CDS 25.0%
! AAAATATTCAAACCATGATC+GGG + chr2_3:39136914-39136933 None:intergenic 25.0%
!!! CTTTTTTTGAGATTTGTATC+AGG + chr2_3:39137085-39137104 None:intergenic 25.0%
! TATATGCATATGATTCTGTT+TGG - chr2_3:39137167-39137186 Msa0291000:CDS 25.0%
! ATGTTAAGGATATCATATGA+TGG + chr2_3:39137409-39137428 None:intergenic 25.0%
! TCATATGATATCCTTAACAT+CGG - chr2_3:39137409-39137428 Msa0291000:CDS 25.0%
!! ACAAAACATTGAACAGTTTT+TGG + chr2_3:39137540-39137559 None:intergenic 25.0%
!! AAAAACTGTTCAATGTTTTG+TGG - chr2_3:39137539-39137558 Msa0291000:CDS 25.0%
! CAATATATATTATTCGGAGA+TGG - chr2_3:39137754-39137773 Msa0291000:CDS 25.0%
! TTAGTGATTCAATGATCATA+TGG - chr2_3:39137857-39137876 Msa0291000:CDS 25.0%
!! AGCAAATTATGACAATCTTT+TGG - chr2_3:39138255-39138274 Msa0291000:CDS 25.0%
! GACATAAAGAGTTCAATATA+AGG + chr2_3:39138848-39138867 None:intergenic 25.0%
! TATATTGAACTCTTTATGTC+TGG - chr2_3:39138848-39138867 Msa0291000:intron 25.0%
! ACATAAGAGTTACATAAGAA+GGG + chr2_3:39138975-39138994 None:intergenic 25.0%
! TACATAAGAGTTACATAAGA+AGG + chr2_3:39138976-39138995 None:intergenic 25.0%
! CTTATGTAACTCTTATGTAA+AGG - chr2_3:39138977-39138996 Msa0291000:CDS 25.0%
!! GAAGATAGAAATGTTTTTCT+TGG + chr2_3:39139427-39139446 None:intergenic 25.0%
! TATTGCAGAGTGTATAAAAA+AGG - chr2_3:39139734-39139753 Msa0291000:five_prime_UTR 25.0%
!!! GATACTCTTACTTGTTTTAG+AGG - chr2_3:39135252-39135271 Msa0291000:three_prime_UTR 30.0%
ACAGTATTAATAAGTAGGTG+TGG + chr2_3:39135354-39135373 None:intergenic 30.0%
CAGCAAAAATTCACAAACAA+AGG + chr2_3:39135616-39135635 None:intergenic 30.0%
TAAGGTAGAACAAAAATTGC+AGG - chr2_3:39135683-39135702 Msa0291000:CDS 30.0%
!! TCAGAGGTTTTTCTGAAAAA+TGG - chr2_3:39135709-39135728 Msa0291000:CDS 30.0%
ATTATAGCCACAACTTCATT+TGG + chr2_3:39135785-39135804 None:intergenic 30.0%
AATGAAGTTGTGGCTATAAT+TGG - chr2_3:39135785-39135804 Msa0291000:CDS 30.0%
!! TTTACTGTTGATTCTGTGAT+TGG - chr2_3:39135857-39135876 Msa0291000:intron 30.0%
TTTCATGATACAAATTGCAG+TGG - chr2_3:39135968-39135987 Msa0291000:intron 30.0%
! ACAAATTGCAGTGGATTTAT+TGG - chr2_3:39135977-39135996 Msa0291000:intron 30.0%
!!! TTTTAGGTTTAATTTTGGGG+AGG - chr2_3:39136045-39136064 Msa0291000:CDS 30.0%
TTTCATTACTTAGGCATTTC+TGG - chr2_3:39136162-39136181 Msa0291000:CDS 30.0%
GACCATTAATTGTTTCAGTT+AGG - chr2_3:39136258-39136277 Msa0291000:CDS 30.0%
! TGGTTAATGAGTTCTAGTTA+AGG + chr2_3:39136315-39136334 None:intergenic 30.0%
AGTCTTAAACTAGAAATGGA+TGG + chr2_3:39136338-39136357 None:intergenic 30.0%
ATGTACCTCTTCTTTCATTT+GGG - chr2_3:39136579-39136598 Msa0291000:intron 30.0%
AGAAACGGAATTTCAATACT+CGG - chr2_3:39136752-39136771 Msa0291000:CDS 30.0%
GCTAAATAGTGTGAACTTAA+TGG - chr2_3:39136859-39136878 Msa0291000:CDS 30.0%
TTTACTATTGCCAAGAATCT+TGG - chr2_3:39136932-39136951 Msa0291000:intron 30.0%
TTCAATGTGTTAGTATCAAC+TGG + chr2_3:39137025-39137044 None:intergenic 30.0%
! AGTTCATTCTCAAAAGTGTA+GGG + chr2_3:39137333-39137352 None:intergenic 30.0%
! AAGTTCATTCTCAAAAGTGT+AGG + chr2_3:39137334-39137353 None:intergenic 30.0%
TAATATATATTGTCGCGGAA+CGG + chr2_3:39137746-39137765 None:intergenic 30.0%
CCGAATAATATATATTGTCG+CGG + chr2_3:39137751-39137770 None:intergenic 30.0%
CCGCGACAATATATATTATT+CGG - chr2_3:39137748-39137767 Msa0291000:CDS 30.0%
GATCATTGAATCACTAAATG+AGG + chr2_3:39137854-39137873 None:intergenic 30.0%
!! ATTGTCATAATTTGCTTCCT+GGG + chr2_3:39138251-39138270 None:intergenic 30.0%
! TTTTCTTGGTTGCTATGATT+TGG - chr2_3:39138491-39138510 Msa0291000:intron 30.0%
ATATCAGGTAATCAACCAAT+TGG - chr2_3:39138668-39138687 Msa0291000:intron 30.0%
AACTCAATATACAACCATCT+AGG - chr2_3:39138732-39138751 Msa0291000:intron 30.0%
TTTAGTGAACACATTTCCAA+CGG + chr2_3:39138894-39138913 None:intergenic 30.0%
GGATTTGTAAGTATCTCTAA+TGG - chr2_3:39138923-39138942 Msa0291000:CDS 30.0%
AACAATCACTATCATAGAAG+AGG + chr2_3:39139048-39139067 None:intergenic 30.0%
AGTTGACATATCAATAGCAA+GGG + chr2_3:39139146-39139165 None:intergenic 30.0%
ATTCTTCAACTCTCAGAAAA+TGG - chr2_3:39139169-39139188 Msa0291000:CDS 30.0%
AATACATGAAATTCATCCCA+GGG - chr2_3:39139362-39139381 Msa0291000:intron 30.0%
CAAAGACTTGATTGTATTTG+TGG - chr2_3:39139456-39139475 Msa0291000:five_prime_UTR 30.0%
TAAGAGAGAGAGAGAAATAA+AGG - chr2_3:39139480-39139499 Msa0291000:five_prime_UTR 30.0%
GAGAAATAAAGGAGATACTT+AGG - chr2_3:39139491-39139510 Msa0291000:five_prime_UTR 30.0%
!! TTGTTATTTACTTAGGTAGG+TGG + chr2_3:39139571-39139590 None:intergenic 30.0%
TATTTAGATTCCATCCTTCT+TGG - chr2_3:39139685-39139704 Msa0291000:five_prime_UTR 30.0%
ATAAAAAAGGCAAGCAATCT+TGG - chr2_3:39139747-39139766 Msa0291000:five_prime_UTR 30.0%
!! ATGATGCAAGTTTAGCTTTG+AGG - chr2_3:39135221-39135240 Msa0291000:three_prime_UTR 35.0%
! TTCAGCTTTTGTCTTCACTT+TGG - chr2_3:39135374-39135393 Msa0291000:CDS 35.0%
TTGGAATACCTTACCTTGAT+TGG - chr2_3:39135393-39135412 Msa0291000:CDS 35.0%
TAAAGTCTTGATCATGCTCA+TGG - chr2_3:39135470-39135489 Msa0291000:CDS 35.0%
TTGAAAAGGTTGTACTTGAC+AGG - chr2_3:39135639-39135658 Msa0291000:CDS 35.0%
CAAAAATTGCAGGATTTCAG+AGG - chr2_3:39135693-39135712 Msa0291000:CDS 35.0%
!! GAGGTTTTTCTGAAAAATGG+AGG - chr2_3:39135712-39135731 Msa0291000:CDS 35.0%
!! TTCTGAAAAATGGAGGTGTT+AGG - chr2_3:39135719-39135738 Msa0291000:CDS 35.0%
!!! TCCTCTTGTTTTTCTGTTTG+TGG - chr2_3:39135756-39135775 Msa0291000:CDS 35.0%
TCCACAAACAGAAAAACAAG+AGG + chr2_3:39135760-39135779 None:intergenic 35.0%
AGACCAACTGTTGTGAAAAT+TGG - chr2_3:39135827-39135846 Msa0291000:intron 35.0%
GCTAATAAGACTATTCTTCC+TGG - chr2_3:39135926-39135945 Msa0291000:intron 35.0%
GGATTTATTGGAACAGTTGA+AGG - chr2_3:39135989-39136008 Msa0291000:intron 35.0%
TCAGACTTTACTTATCTCTC+AGG + chr2_3:39136240-39136259 None:intergenic 35.0%
GCCCTAACTGAAACAATTAA+TGG + chr2_3:39136263-39136282 None:intergenic 35.0%
CTTAAACTAGAAATGGATGG+TGG + chr2_3:39136335-39136354 None:intergenic 35.0%
AATGAAGTGATTGCCACAAT+TGG - chr2_3:39136503-39136522 Msa0291000:intron 35.0%
! CAAATGAAAGAAGAGGTACA+TGG + chr2_3:39136580-39136599 None:intergenic 35.0%
CATGTACCTCTTCTTTCATT+TGG - chr2_3:39136578-39136597 Msa0291000:intron 35.0%
TGTACCTCTTCTTTCATTTG+GGG - chr2_3:39136580-39136599 Msa0291000:intron 35.0%
GACGATGATTATGGAAGAAA+CGG - chr2_3:39136737-39136756 Msa0291000:CDS 35.0%
CAAGATACTGATATCATCCT+TGG + chr2_3:39136840-39136859 None:intergenic 35.0%
AGTCATCATTCCAAGATTCT+TGG + chr2_3:39136945-39136964 None:intergenic 35.0%
AATCTTGGAATGATGACTAG+TGG - chr2_3:39136947-39136966 Msa0291000:intron 35.0%
TCCTTCAAAGTTGGATTCAA+TGG - chr2_3:39136997-39137016 Msa0291000:intron 35.0%
TCCATTGAATCCAACTTTGA+AGG + chr2_3:39137001-39137020 None:intergenic 35.0%
AACACATTGAAACTCCTTCA+AGG - chr2_3:39137034-39137053 Msa0291000:intron 35.0%
CTTGATGCTTTACTCAAAGA+AGG - chr2_3:39137205-39137224 Msa0291000:CDS 35.0%
! CTTTTGTGTCAATCAGCTTA+GGG + chr2_3:39137255-39137274 None:intergenic 35.0%
!! CTTTTGAGAATGAACTTCAC+TGG - chr2_3:39137337-39137356 Msa0291000:CDS 35.0%
! GGTTATTGGTCTAATTACTC+CGG - chr2_3:39137454-39137473 Msa0291000:CDS 35.0%
! TTGCTTATTGAAGTGTTAGG+TGG + chr2_3:39137517-39137536 None:intergenic 35.0%
! TGGTTGCTTATTGAAGTGTT+AGG + chr2_3:39137520-39137539 None:intergenic 35.0%
TCAAAGGCTTTCCATTGTTT+GGG + chr2_3:39137603-39137622 None:intergenic 35.0%
AATATATATTGTCGCGGAAC+GGG + chr2_3:39137745-39137764 None:intergenic 35.0%
AATTGAGTTTCCGATTTCCA+AGG - chr2_3:39137917-39137936 Msa0291000:CDS 35.0%
ATTGAGTTTCCGATTTCCAA+GGG - chr2_3:39137918-39137937 Msa0291000:CDS 35.0%
!! CTGCATCAAAGTTCTGAAAA+AGG + chr2_3:39137992-39138011 None:intergenic 35.0%
CCAAAATCCTTGTTCTGTTT+GGG + chr2_3:39138037-39138056 None:intergenic 35.0%
TCCAAAATCCTTGTTCTGTT+TGG + chr2_3:39138038-39138057 None:intergenic 35.0%
TTTGAGCAGTGAATGGTTTA+AGG + chr2_3:39138139-39138158 None:intergenic 35.0%
AGCACCAACAAAAAGGAAAA+AGG + chr2_3:39138180-39138199 None:intergenic 35.0%
ATACTACAGCACCAACAAAA+AGG + chr2_3:39138187-39138206 None:intergenic 35.0%
!!! TTTTTGTTGGTGCTGTAGTA+TGG - chr2_3:39138186-39138205 Msa0291000:CDS 35.0%
!! GATTGTCATAATTTGCTTCC+TGG + chr2_3:39138252-39138271 None:intergenic 35.0%
!! AGATTTGTTCCTTCTTTTGC+AGG - chr2_3:39138373-39138392 Msa0291000:CDS 35.0%
GAAAGTAAACCTGCAAAAGA+AGG + chr2_3:39138385-39138404 None:intergenic 35.0%
GGAGATTTGTGCTAATCATA+TGG - chr2_3:39138543-39138562 Msa0291000:intron 35.0%
GTCAATTCCTTCAATTTGTG+AGG + chr2_3:39138642-39138661 None:intergenic 35.0%
CAACCAATTGGAATTCAAGA+CGG - chr2_3:39138680-39138699 Msa0291000:intron 35.0%
AACCAATTGGAATTCAAGAC+GGG - chr2_3:39138681-39138700 Msa0291000:intron 35.0%
CTCAATGAAACTATCCTAGA+TGG + chr2_3:39138749-39138768 None:intergenic 35.0%
AGTTTCATTGAGAGATCCAA+AGG - chr2_3:39138757-39138776 Msa0291000:intron 35.0%
GGAAATGTGTTCACTAAAAG+TGG - chr2_3:39138896-39138915 Msa0291000:intron 35.0%
ATGTGTTCACTAAAAGTGGT+TGG - chr2_3:39138900-39138919 Msa0291000:intron 35.0%
TGTGTTCACTAAAAGTGGTT+GGG - chr2_3:39138901-39138920 Msa0291000:intron 35.0%
ATCTCTAATGGCATGCTTTA+CGG - chr2_3:39138935-39138954 Msa0291000:CDS 35.0%
GAGTTACATAAGAAGGGTTT+AGG + chr2_3:39138969-39138988 None:intergenic 35.0%
ATGTTCAATACCATGATCAC+AGG - chr2_3:39139102-39139121 Msa0291000:CDS 35.0%
TGTTCAATACCATGATCACA+GGG - chr2_3:39139103-39139122 Msa0291000:CDS 35.0%
GTTGACATATCAATAGCAAG+GGG + chr2_3:39139145-39139164 None:intergenic 35.0%
CAGTTGACATATCAATAGCA+AGG + chr2_3:39139147-39139166 None:intergenic 35.0%
AACTCTCTCTTAAAAGCTTC+TGG - chr2_3:39139269-39139288 Msa0291000:intron 35.0%
ACTCTCTCTTAAAAGCTTCT+GGG - chr2_3:39139270-39139289 Msa0291000:intron 35.0%
CAATACATGAAATTCATCCC+AGG - chr2_3:39139361-39139380 Msa0291000:intron 35.0%
! AGAAATGTTTTTCTTGGCCT+AGG + chr2_3:39139421-39139440 None:intergenic 35.0%
TTAGGCAGAAGAGTAAGAAA+AGG - chr2_3:39139509-39139528 Msa0291000:five_prime_UTR 35.0%
CAATAATTTCCTAGCCAAGA+AGG + chr2_3:39139702-39139721 None:intergenic 35.0%
AACTTAGATACCGACATACC+TGG + chr2_3:39135511-39135530 None:intergenic 40.0%
!! TGAGTTCTGGTGTTGGTTTA+AGG - chr2_3:39135665-39135684 Msa0291000:CDS 40.0%
!! AATGGAGGTGTTAGGAGTAA+AGG - chr2_3:39135727-39135746 Msa0291000:CDS 40.0%
!! ATGGAGGTGTTAGGAGTAAA+GGG - chr2_3:39135728-39135747 Msa0291000:CDS 40.0%
GTGGATTCCAAATGAAGTTG+TGG - chr2_3:39135775-39135794 Msa0291000:CDS 40.0%
! GCTCCAATTTTCACAACAGT+TGG + chr2_3:39135833-39135852 None:intergenic 40.0%
ATTGGAAGATCAGCTCAACA+AGG - chr2_3:39135875-39135894 Msa0291000:intron 40.0%
TCTTAAACCTTCGGTTCTCA+CGG - chr2_3:39136196-39136215 Msa0291000:CDS 40.0%
AACACAGAGACTTGCAGATA+GGG + chr2_3:39136421-39136440 None:intergenic 40.0%
AAACACAGAGACTTGCAGAT+AGG + chr2_3:39136422-39136441 None:intergenic 40.0%
! TGATGTAGCTTTGCAGTTGA+TGG - chr2_3:39136478-39136497 Msa0291000:intron 40.0%
GATGATATGAGCTATTCCTG+AGG + chr2_3:39136537-39136556 None:intergenic 40.0%
TGGAAACTGCAGAGAAGATA+GGG + chr2_3:39136618-39136637 None:intergenic 40.0%
ATGGAAACTGCAGAGAAGAT+AGG + chr2_3:39136619-39136638 None:intergenic 40.0%
GATACTGATATCATCCTTGG+TGG + chr2_3:39136837-39136856 None:intergenic 40.0%
GTTCATGTTAATCCCGATCA+TGG - chr2_3:39136899-39136918 Msa0291000:CDS 40.0%
TGATGACTAGTGGTTATGTG+TGG - chr2_3:39136957-39136976 Msa0291000:intron 40.0%
! ATGTGTGGATTGCAACAGAT+TGG - chr2_3:39136972-39136991 Msa0291000:intron 40.0%
!! AGATTGGCTTCCTTCAAAGT+TGG - chr2_3:39136988-39137007 Msa0291000:intron 40.0%
TCAAAGCTACAACACCTTGA+AGG + chr2_3:39137051-39137070 None:intergenic 40.0%
!! TTCAAGGTGTTGTAGCTTTG+AGG - chr2_3:39137050-39137069 Msa0291000:intron 40.0%
! TCTAGGTTGAAGAACGCAAA+CGG - chr2_3:39137112-39137131 Msa0291000:CDS 40.0%
GATGCTTTACTCAAAGAAGG+TGG - chr2_3:39137208-39137227 Msa0291000:CDS 40.0%
! CCTTTTGTGTCAATCAGCTT+AGG + chr2_3:39137256-39137275 None:intergenic 40.0%
CCTAAGCTGATTGACACAAA+AGG - chr2_3:39137253-39137272 Msa0291000:CDS 40.0%
! AAAAGTGTAGGGAGAAAGTC+CGG + chr2_3:39137322-39137341 None:intergenic 40.0%
!! ATGAACTTCACTGGTTTGAG+TGG - chr2_3:39137346-39137365 Msa0291000:CDS 40.0%
ATCCTTAACATCGGTGAATC+TGG - chr2_3:39137418-39137437 Msa0291000:CDS 40.0%
AACCAGATTCACCGATGTTA+AGG + chr2_3:39137423-39137442 None:intergenic 40.0%
AGGAGCTAAAACTGATAGAC+CGG + chr2_3:39137476-39137495 None:intergenic 40.0%
GGTCTCTTGTACAAAACTTC+AGG + chr2_3:39137496-39137515 None:intergenic 40.0%
GAAACTATAGCTACACCAAG+AGG - chr2_3:39137568-39137587 Msa0291000:CDS 40.0%
TATAGCTACACCAAGAGGAT+GGG - chr2_3:39137573-39137592 Msa0291000:CDS 40.0%
CTCAAAGGCTTTCCATTGTT+TGG + chr2_3:39137604-39137623 None:intergenic 40.0%
!! CTACCTCGAGTTTGTTTCTA+AGG - chr2_3:39137648-39137667 Msa0291000:CDS 40.0%
TGTCCTTAGAAACAAACTCG+AGG + chr2_3:39137654-39137673 None:intergenic 40.0%
AAGAATCCACCAGGAGTTAA+AGG - chr2_3:39137673-39137692 Msa0291000:CDS 40.0%
ATGCAATAGCCTTTAACTCC+TGG + chr2_3:39137685-39137704 None:intergenic 40.0%
GGGATAAGGCAACAAGTTTA+TGG + chr2_3:39137725-39137744 None:intergenic 40.0%
ATTAACAAGCTGGCTGTAGT+CGG + chr2_3:39137791-39137810 None:intergenic 40.0%
TGATCATATGGCTCAGAACA+AGG - chr2_3:39137869-39137888 Msa0291000:CDS 40.0%
CTTGAAACTCCCTTGGAAAT+CGG + chr2_3:39137930-39137949 None:intergenic 40.0%
CAATTGTCCCAAACAGAACA+AGG - chr2_3:39138027-39138046 Msa0291000:CDS 40.0%
! CCCAAACAGAACAAGGATTT+TGG - chr2_3:39138034-39138053 Msa0291000:CDS 40.0%
GGATTTCACTCAACCTTTCA+TGG - chr2_3:39138055-39138074 Msa0291000:CDS 40.0%
ACTCAACCTTTCATGGAATC+AGG - chr2_3:39138062-39138081 Msa0291000:CDS 40.0%
CTCAACCTTTCATGGAATCA+GGG - chr2_3:39138063-39138082 Msa0291000:CDS 40.0%
! CTTGATTTGATCTCCTTGAC+AGG + chr2_3:39138104-39138123 None:intergenic 40.0%
ATGGTTTAAGGAAAGCCCAA+GGG + chr2_3:39138127-39138146 None:intergenic 40.0%
AATGGTTTAAGGAAAGCCCA+AGG + chr2_3:39138128-39138147 None:intergenic 40.0%
AACCATTCACTGCTCAAATG+TGG - chr2_3:39138141-39138160 Msa0291000:CDS 40.0%
! AACAAAAAGGAAAAAGGCGC+CGG + chr2_3:39138174-39138193 None:intergenic 40.0%
TAGTATGGATTCTTGAGCAC+AGG - chr2_3:39138201-39138220 Msa0291000:CDS 40.0%
AAGAATGGCTTGAGAAACTC+TGG + chr2_3:39138311-39138330 None:intergenic 40.0%
AAAACACTGTGAGTGGTCTT+GGG - chr2_3:39138522-39138541 Msa0291000:intron 40.0%
CAGCTATCCTCACAAATTGA+AGG - chr2_3:39138632-39138651 Msa0291000:intron 40.0%
GGAATTGACAGCTTGATATC+AGG - chr2_3:39138653-39138672 Msa0291000:intron 40.0%
! GAGAGATCCAAAGGTATATG+AGG - chr2_3:39138766-39138785 Msa0291000:intron 40.0%
GTGTTCACTAAAAGTGGTTG+GGG - chr2_3:39138902-39138921 Msa0291000:intron 40.0%
! ATTTGTCGTGGATCTTTTGC+AGG + chr2_3:39139198-39139217 None:intergenic 40.0%
TGCAAAAGATCCACGACAAA+TGG - chr2_3:39139197-39139216 Msa0291000:exon 40.0%
CTCTCTCTTAAAAGCTTCTG+GGG - chr2_3:39139271-39139290 Msa0291000:intron 40.0%
TGGGGTCTCTTTCTTATATG+TGG - chr2_3:39139289-39139308 Msa0291000:intron 40.0%
CAAACTGATCATCTAAGCTC+TGG + chr2_3:39139543-39139562 None:intergenic 40.0%
AATTTCCTAGCCAAGAAGGA+TGG + chr2_3:39139698-39139717 None:intergenic 40.0%
!! ACTTGACAGGTGTTGAGTTC+TGG - chr2_3:39135652-39135671 Msa0291000:CDS 45.0%
CTTAAACCTTCGGTTCTCAC+GGG - chr2_3:39136197-39136216 Msa0291000:CDS 45.0%
TTATTTCCCGTGAGAACCGA+AGG + chr2_3:39136206-39136225 None:intergenic 45.0%
TGAGGATTGTGGACCAATTG+TGG + chr2_3:39136519-39136538 None:intergenic 45.0%
ACAATTGGTCCACAATCCTC+AGG - chr2_3:39136518-39136537 Msa0291000:CDS 45.0%
TGAGCTATTCCTGAGGATTG+TGG + chr2_3:39136530-39136549 None:intergenic 45.0%
GTTGCCCCAAATGAAAGAAG+AGG + chr2_3:39136587-39136606 None:intergenic 45.0%
ACTGCAGAGAAGATAGGGTA+GGG + chr2_3:39136613-39136632 None:intergenic 45.0%
AACTGCAGAGAAGATAGGGT+AGG + chr2_3:39136614-39136633 None:intergenic 45.0%
! TGCGTGGTTCGGACAAAATA+TGG + chr2_3:39136638-39136657 None:intergenic 45.0%
TACAAAGCCGCATTATCTCC+TGG - chr2_3:39136809-39136828 Msa0291000:CDS 45.0%
! TCTTCGCTTCGCGTTTTCAA+TGG - chr2_3:39137292-39137311 Msa0291000:CDS 45.0%
! ACATCGGTGAATCTGGTTTC+CGG - chr2_3:39137425-39137444 Msa0291000:CDS 45.0%
! TAGACCAATAACCGACTCTC+CGG + chr2_3:39137447-39137466 None:intergenic 45.0%
! CTGTTCAATGTTTTGTGGCC+TGG - chr2_3:39137544-39137563 Msa0291000:CDS 45.0%
GGTGTAGCTATAGTTTCTCC+AGG + chr2_3:39137565-39137584 None:intergenic 45.0%
CTATAGCTACACCAAGAGGA+TGG - chr2_3:39137572-39137591 Msa0291000:CDS 45.0%
TTTGGGAAAACCCATCCTCT+TGG + chr2_3:39137586-39137605 None:intergenic 45.0%
!! GGATGGGTTTTCCCAAACAA+TGG - chr2_3:39137589-39137608 Msa0291000:CDS 45.0%
!! TGAGGCACTGCTATTCTCAA+AGG + chr2_3:39137619-39137638 None:intergenic 45.0%
TCGAGGTAGCTTATTCTGTG+AGG + chr2_3:39137637-39137656 None:intergenic 45.0%
TCTAAGGACAAGAATCCACC+AGG - chr2_3:39137664-39137683 Msa0291000:CDS 45.0%
CAATAGCCTTTAACTCCTGG+TGG + chr2_3:39137682-39137701 None:intergenic 45.0%
TTAACAAGCTGGCTGTAGTC+GGG + chr2_3:39137790-39137809 None:intergenic 45.0%
!! CTACAGCCAGCTTGTTAATC+AGG - chr2_3:39137792-39137811 Msa0291000:CDS 45.0%
GTGCAACCTGATTAACAAGC+TGG + chr2_3:39137801-39137820 None:intergenic 45.0%
GAAGACACTTGAAACTCCCT+TGG + chr2_3:39137937-39137956 None:intergenic 45.0%
CAGAACTTTGATGCAGCTGT+TGG - chr2_3:39137996-39138015 Msa0291000:CDS 45.0%
! GGTAGTTGTTGTTCCTGTCA+AGG - chr2_3:39138088-39138107 Msa0291000:CDS 45.0%
AGGAGATCAAATCAAGCCCT+TGG - chr2_3:39138108-39138127 Msa0291000:CDS 45.0%
GGAGATCAAATCAAGCCCTT+GGG - chr2_3:39138109-39138128 Msa0291000:CDS 45.0%
CACCACATTTGAGCAGTGAA+TGG + chr2_3:39138146-39138165 None:intergenic 45.0%
GCTCAAATGTGGTGTGTTAC+CGG - chr2_3:39138152-39138171 Msa0291000:CDS 45.0%
! GGCGCCTTTTTCCTTTTTGT+TGG - chr2_3:39138173-39138192 Msa0291000:CDS 45.0%
!! GTCATAATTTGCTTCCTGGG+TGG + chr2_3:39138248-39138267 None:intergenic 45.0%
CTCAAGCCATTCTTGATGCA+CGG - chr2_3:39138317-39138336 Msa0291000:CDS 45.0%
! TGGTTGCTATGATTTGGCAC+AGG - chr2_3:39138497-39138516 Msa0291000:intron 45.0%
ACAGGAGAAAACACTGTGAG+TGG - chr2_3:39138515-39138534 Msa0291000:intron 45.0%
GAAAACACTGTGAGTGGTCT+TGG - chr2_3:39138521-39138540 Msa0291000:intron 45.0%
GACCCGTCTTGAATTCCAAT+TGG + chr2_3:39138686-39138705 None:intergenic 45.0%
AAGACGGGTCATTTGCAAGA+AGG - chr2_3:39138696-39138715 Msa0291000:intron 45.0%
!! AACGGTTCTGAACTTGCAGT+TGG + chr2_3:39138876-39138895 None:intergenic 45.0%
AACTGCAAGTTCAGAACCGT+TGG - chr2_3:39138875-39138894 Msa0291000:intron 45.0%
ATGATCACAGGGATTCCAGA+GGG - chr2_3:39139114-39139133 Msa0291000:CDS 45.0%
GTCTTGAAAGCCATTTGTCG+TGG + chr2_3:39139210-39139229 None:intergenic 45.0%
TGGCTTTCAAGACAGAACTG+TGG - chr2_3:39139217-39139236 Msa0291000:five_prime_UTR 45.0%
! GTTTTTCTTGGCCTAGGTGA+CGG + chr2_3:39139415-39139434 None:intergenic 45.0%
AGATTCCATCCTTCTTGGCT+AGG - chr2_3:39139690-39139709 Msa0291000:five_prime_UTR 45.0%
!! CAGGTGTTGAGTTCTGGTGT+TGG - chr2_3:39135658-39135677 Msa0291000:CDS 50.0%
AATAGTCGCTGTGCGTGGTT+CGG + chr2_3:39136649-39136668 None:intergenic 50.0%
CTGAAAATAGTCGCTGTGCG+TGG + chr2_3:39136654-39136673 None:intergenic 50.0%
GATGCGCTAGCAAAGAAACG+CGG - chr2_3:39136776-39136795 Msa0291000:CDS 50.0%
ATTATCTCCTGGAGCCACCA+AGG - chr2_3:39136820-39136839 Msa0291000:CDS 50.0%
! ATATCATCCTTGGTGGCTCC+AGG + chr2_3:39136830-39136849 None:intergenic 50.0%
GTTGAAGAACGCAAACGGCA+CGG - chr2_3:39137117-39137136 Msa0291000:CDS 50.0%
! TCGCTTCGCGTTTTCAATGG+CGG - chr2_3:39137295-39137314 Msa0291000:CDS 50.0%
! GAATCTGGTTTCCGGAGAGT+CGG - chr2_3:39137433-39137452 Msa0291000:CDS 50.0%
GTTTCCGGAGAGTCGGTTAT+TGG - chr2_3:39137440-39137459 Msa0291000:CDS 50.0%
TATTGTCGCGGAACGGGATA+AGG + chr2_3:39137739-39137758 None:intergenic 50.0%
ACCTTTCATGGAATCAGGGC+TGG - chr2_3:39138067-39138086 Msa0291000:CDS 50.0%
ACCAGCCCTGATTCCATGAA+AGG + chr2_3:39138071-39138090 None:intergenic 50.0%
TCTTGAGCACAGGCACAATC+CGG - chr2_3:39138211-39138230 Msa0291000:CDS 50.0%
AGCAAGCCGTGCATCAAGAA+TGG + chr2_3:39138326-39138345 None:intergenic 50.0%
! AGGGCGTCCTCATATACCTT+TGG + chr2_3:39138776-39138795 None:intergenic 50.0%
!! CTCTGGAATCCCTGTGATCA+TGG + chr2_3:39139115-39139134 None:intergenic 50.0%
CATGATCACAGGGATTCCAG+AGG - chr2_3:39139113-39139132 Msa0291000:CDS 50.0%
ATTCATCCCAGGGAGTGAGA+TGG - chr2_3:39139372-39139391 Msa0291000:intron 50.0%
CAACTTCCATCTCACTCCCT+GGG + chr2_3:39139381-39139400 None:intergenic 50.0%
TCAACTTCCATCTCACTCCC+TGG + chr2_3:39139382-39139401 None:intergenic 50.0%
GAGTGAGATGGAAGTTGACC+AGG - chr2_3:39139384-39139403 Msa0291000:intron 50.0%
ACCAGGAAAATCCGTCACCT+AGG - chr2_3:39139401-39139420 Msa0291000:intron 50.0%
GGTGGCTCCAGGAGATAATG+CGG + chr2_3:39136819-39136838 None:intergenic 55.0%
! TCGCGTTTTCAATGGCGGTC+CGG - chr2_3:39137300-39137319 Msa0291000:CDS 55.0%
TTTGCTTCCTGGGTGGACCT+CGG + chr2_3:39138241-39138260 None:intergenic 55.0%
TAGCTGCTGCACTGTGAGGA+TGG + chr2_3:39138618-39138637 None:intergenic 55.0%
AGGATAGCTGCTGCACTGTG+AGG + chr2_3:39138622-39138641 None:intergenic 55.0%
TCCATTCGGTCCACGCGTAA+GGG + chr2_3:39138795-39138814 None:intergenic 55.0%
GCTACAACCCCTCCTCCATT+CGG + chr2_3:39138809-39138828 None:intergenic 55.0%
!!! GCCTAGGTGACGGATTTTCC+TGG + chr2_3:39139405-39139424 None:intergenic 55.0%
AGGCACAATCCGGAGTTCCG+AGG - chr2_3:39138221-39138240 Msa0291000:CDS 60.0%
TATGAGGACGCCCTTACGCG+TGG - chr2_3:39138782-39138801 Msa0291000:intron 60.0%
CTCCATTCGGTCCACGCGTA+AGG + chr2_3:39138796-39138815 None:intergenic 60.0%
CTTACGCGTGGACCGAATGG+AGG - chr2_3:39138794-39138813 Msa0291000:intron 60.0%
TAGCAAGGGGAGAGTCCCTC+TGG + chr2_3:39139132-39139151 None:intergenic 60.0%
CTGGGTGGACCTCGGAACTC+CGG + chr2_3:39138233-39138252 None:intergenic 65.0%
GCCCTTACGCGTGGACCGAA+TGG - chr2_3:39138791-39138810 Msa0291000:intron 65.0%
ACGCGTGGACCGAATGGAGG+AGG - chr2_3:39138797-39138816 Msa0291000:intron 65.0%
CGCGTGGACCGAATGGAGGA+GGG - chr2_3:39138798-39138817 Msa0291000:intron 65.0%
GCGTGGACCGAATGGAGGAG+GGG - chr2_3:39138799-39138818 Msa0291000:intron 65.0%
CGGAGTTCCGAGGTCCACCC+AGG - chr2_3:39138231-39138250 Msa0291000:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 39135088 39139844 39135088 ID=Msa0291000;Name=Msa0291000
chr2_3 mRNA 39135088 39139844 39135088 ID=Msa0291000-mRNA-1;Parent=Msa0291000;Name=Msa0291000-mRNA-1;_AED=0.06;_eAED=0.06;_QI=491|1|1|1|0.83|0.71|7|265|932
chr2_3 exon 39135088 39135808 39135088 ID=Msa0291000-mRNA-1:exon:12681;Parent=Msa0291000-mRNA-1
chr2_3 exon 39136004 39136413 39136004 ID=Msa0291000-mRNA-1:exon:12680;Parent=Msa0291000-mRNA-1
chr2_3 exon 39136506 39136537 39136506 ID=Msa0291000-mRNA-1:exon:12679;Parent=Msa0291000-mRNA-1
chr2_3 exon 39136656 39136933 39136656 ID=Msa0291000-mRNA-1:exon:12678;Parent=Msa0291000-mRNA-1
chr2_3 exon 39137107 39138446 39137107 ID=Msa0291000-mRNA-1:exon:12677;Parent=Msa0291000-mRNA-1
chr2_3 exon 39138922 39139271 39138922 ID=Msa0291000-mRNA-1:exon:12676;Parent=Msa0291000-mRNA-1
chr2_3 exon 39139421 39139844 39139421 ID=Msa0291000-mRNA-1:exon:12675;Parent=Msa0291000-mRNA-1
chr2_3 five_prime_UTR 39139421 39139844 39139421 ID=Msa0291000-mRNA-1:five_prime_utr;Parent=Msa0291000-mRNA-1
chr2_3 five_prime_UTR 39139205 39139271 39139205 ID=Msa0291000-mRNA-1:five_prime_utr;Parent=Msa0291000-mRNA-1
chr2_3 CDS 39138922 39139204 39138922 ID=Msa0291000-mRNA-1:cds;Parent=Msa0291000-mRNA-1
chr2_3 CDS 39137107 39138446 39137107 ID=Msa0291000-mRNA-1:cds;Parent=Msa0291000-mRNA-1
chr2_3 CDS 39136656 39136933 39136656 ID=Msa0291000-mRNA-1:cds;Parent=Msa0291000-mRNA-1
chr2_3 CDS 39136506 39136537 39136506 ID=Msa0291000-mRNA-1:cds;Parent=Msa0291000-mRNA-1
chr2_3 CDS 39136004 39136413 39136004 ID=Msa0291000-mRNA-1:cds;Parent=Msa0291000-mRNA-1
chr2_3 CDS 39135353 39135808 39135353 ID=Msa0291000-mRNA-1:cds;Parent=Msa0291000-mRNA-1
chr2_3 three_prime_UTR 39135088 39135352 39135088 ID=Msa0291000-mRNA-1:three_prime_utr;Parent=Msa0291000-mRNA-1
Gene Sequence

>Msa0291000

ATGGAGGTGTTAGGAGTAAAGGGTTTTGTCCTCTTGTTTTTCTGTTTGTGGATTCCAAATGAAGTTGTGGCTATAATTGGAAACTCTACTGTTTCTTCTAGACCAACTGTTGTGAAAATTGGAGCACTGTTTACTGTTGATTCTGTGATTGGAAGATCAGCTCAACAAGGAATCAAAACTGCAATTGATGATGTTAATGCTAATAAGACTATTCTTCCTGGTATTAAAATGGATGTTATTTTTCATGATACAAATTGCAGTGGATTTATTGGAACAGTTGAAGCTTTGCAGTTGATGGAGAATGAAGTGATTGCCACAATTGGTCCACAATCCTCAGGAATAGCTCATATCATCGCTCATGTAGCTAATGAACTCCATGTACCTCTTCTTTCATTTGGGGCAACAGACCCTACCCTATCTTCTCTGCAGTTTCCATATTTTGTCCGAACCACGCACAGCGACTATTTTCAGATGTATGCAATTGCAGACATTGTTGATTTTTATAGATGGAGGCAAGTAATTGCCATTTTTGTAGACGATGATTATGGAAGAAACGGAATTTCAATACTCGGAGATGCGCTAGCAAAGAAACGCGGCAAGATATCTTACAAAGCCGCATTATCTCCTGGAGCCACCAAGGATGATATCAGTATCTTGCTAAATAGTGTGAACTTAATGGAATCAAGAGTCTTTGTTGTTCATGTTAATCCCGATCATGGTTTGAATATTTTTACTATTGCCAAGAATCTTGGAATGATGACTAGTGGTTATGTGTGGATTGCAACAGATTGGCTTCCTTCAAAGTTGGATTCAATGGAGCCAGTTGATACTAACACATTGAAACTCCTTCAAGGTGTTGTAGCTTTGAGGCATCACACTCCTGATACAAATCTCAAAAAAAGTTTTTTCTCTAGGTTGAAGAACGCAAACGGCACGGAAACTACAAGCTTCAATTCTTATGCTTTATATGCATATGATTCTGTTTGGTTAGCAGCTTATGCTCTTGATGCTTTACTCAAAGAAGGTGGAAACATATCTTTCTCATCTGACCCTAAGCTGATTGACACAAAAGGAAGCATGTTGCATTTGTCTTCGCTTCGCGTTTTCAATGGCGGTCCGGACTTTCTCCCTACACTTTTGAGAATGAACTTCACTGGTTTGAGTGGTCAGATTCAGTTCAATGTAGACAAGAATCTAATTCGTCCATCATATGATATCCTTAACATCGGTGAATCTGGTTTCCGGAGAGTCGGTTATTGGTCTAATTACTCCGGTCTATCAGTTTTAGCTCCTGAAGTTTTGTACAAGAGACCACCTAACACTTCAATAAGCAACCAAAAACTGTTCAATGTTTTGTGGCCTGGAGAAACTATAGCTACACCAAGAGGATGGGTTTTCCCAAACAATGGAAAGCCTTTGAGAATAGCAGTGCCTCACAGAATAAGCTACCTCGAGTTTGTTTCTAAGGACAAGAATCCACCAGGAGTTAAAGGCTATTGCATTGATATCTTCGAAGCAGCCATAAACTTGTTGCCTTATCCCGTTCCGCGACAATATATATTATTCGGAGATGGTAAAAGAAATCCCGACTACAGCCAGCTTGTTAATCAGGTTGCACTAAATAACTTTGATGCAGCTGTTGGAGATGTTACAATTGTCCCAAACAGAACAAGGATTTTGGATTTCACTCAACCTTTCATGGAATCAGGGCTGGTAGTTGTTGTTCCTGTCAAGGAGATCAAATCAAGCCCTTGGGCTTTCCTTAAACCATTCACTGCTCAAATGTGGTGTGTTACCGGCGCCTTTTTCCTTTTTGTTGGTGCTGTAGTATGGATTCTTGAGCACAGGCACAATCCGGAGTTCCGAGGTCCACCCAGGAAGCAAATTATGACAATCTTTTGGTTTACTTTCTCAACAATGTTTTTCTCACACAGAGAAAACACTGTGAGTGGTCTTGGGAGATTTGTGCTAATCATATGGCTTTTTGTAGTATTAATTATCAATTCAAGCTACACAGCAAGCTTAACATCCATCCTCACAGTGCAGCAGCTATCCTCACAAATTGAAGGAATTGACAGCTTGATATCAGGTAATCAACCAATTGGAATTCAAGACGGGTCATTTGCAAGAAGGTATCTGATAGATGAACTCAATATACAACCATCTAGGATAGTTTCATTGAGAGATCCAAAGGTATATGAGGACGCCCTTACGCGTGGACCGAATGGAGGAGGGGTTGTAGCTATTGTTGATGAGCTTCCTTATATTGAACTCTTTATGTCTGGTACCAACTGCAAGTTCAGAACCGTTGGAAATGTGTTCACTAAAAGTGGTTGGGGATTTGGATTCCAGAGGGACTCTCCCCTTGCTATTGATATGTCAACTGCAATTCTTCAACTCTCAGAAAATGGTGACCTGCAAAAGATCCACGACAAATGGCTTTCAAGACAGAACTGTGGTGCAAAAGTTAACGACACTGATTCAAATGAACTCTCTCTTAAAAGCTTCTGGGGTCTCTTTCTTATATGTGGCATTGCATGTCTCATTGCTTTGATTGCATTCTTTGTTAGAGTGTTCTGTCAATACATGAAATTCATCCCAGGGAGTGAGATGGAAGTTGACCAGGAAAATCCGTCACCTAGGCCAAGAAAAACATTTCTATCTTCGAGAAGCTTCAAAGACTTGATTGTATTTGTGGATAAGAGAGAGAGAGAAATAAAGGAGATACTTAGGCAGAAGAGTAAGAAAAGGAGACGTGACCAGAGCTTAGATGATCAGTTTGATTCACCACCTACCTAA
Protein sequence

>Msa0291000

MEVLGVKGFVLLFFCLWIPNEVVAIIGNSTVSSRPTVVKIGALFTVDSVIGRSAQQGIKTAIDDVNANKTILPGIKMDVIFHDTNCSGFIGTVEALQLMENEVIATIGPQSSGIAHIIAHVANELHVPLLSFGATDPTLSSLQFPYFVRTTHSDYFQMYAIADIVDFYRWRQVIAIFVDDDYGRNGISILGDALAKKRGKISYKAALSPGATKDDISILLNSVNLMESRVFVVHVNPDHGLNIFTIAKNLGMMTSGYVWIATDWLPSKLDSMEPVDTNTLKLLQGVVALRHHTPDTNLKKSFFSRLKNANGTETTSFNSYALYAYDSVWLAAYALDALLKEGGNISFSSDPKLIDTKGSMLHLSSLRVFNGGPDFLPTLLRMNFTGLSGQIQFNVDKNLIRPSYDILNIGESGFRRVGYWSNYSGLSVLAPEVLYKRPPNTSISNQKLFNVLWPGETIATPRGWVFPNNGKPLRIAVPHRISYLEFVSKDKNPPGVKGYCIDIFEAAINLLPYPVPRQYILFGDGKRNPDYSQLVNQVALNNFDAAVGDVTIVPNRTRILDFTQPFMESGLVVVVPVKEIKSSPWAFLKPFTAQMWCVTGAFFLFVGAVVWILEHRHNPEFRGPPRKQIMTIFWFTFSTMFFSHRENTVSGLGRFVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISGNQPIGIQDGSFARRYLIDELNIQPSRIVSLRDPKVYEDALTRGPNGGGVVAIVDELPYIELFMSGTNCKFRTVGNVFTKSGWGFGFQRDSPLAIDMSTAILQLSENGDLQKIHDKWLSRQNCGAKVNDTDSNELSLKSFWGLFLICGIACLIALIAFFVRVFCQYMKFIPGSEMEVDQENPSPRPRKTFLSSRSFKDLIVFVDKREREIKEILRQKSKKRRRDQSLDDQFDSPPT*