AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0293370


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0293370 MtrunA17_Chr2g0314411 79.545 308 23 2 1 268 1 308 1.65e-176 488
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0293370 AT1G28100.1 47.569 288 107 5 1 253 1 279 1.01e-84 255
Msa0293370 AT1G28100.2 47.569 288 107 5 1 253 1 279 1.01e-84 255
Msa0293370 AT1G28100.6 47.569 288 107 5 1 253 1 279 1.01e-84 255
Msa0293370 AT1G28100.3 47.569 288 107 5 1 253 1 279 1.01e-84 255
Msa0293370 AT1G28100.4 46.284 296 107 6 1 253 1 287 8.14e-82 248
Msa0293370 AT1G28100.5 50.235 213 69 3 1 178 1 211 1.93e-66 206

Find 68 sgRNAs with CRISPR-Local

Find 646 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATAATCTATATGAATTTA+AGG 0.109240 2_3:+43766169 None:intergenic
TTGAAATTGGTTGAAGCTTT+TGG 0.176955 2_3:-43775072 Msa0293370:CDS
TTCATATAGATTATGTTATT+TGG 0.189674 2_3:-43766162 Msa0293370:three_prime_UTR
TCAACCAATTTCAATTCTTT+TGG 0.197334 2_3:+43775081 None:intergenic
CCATACCCAGATGAAGATTT+TGG 0.200749 2_3:+43775270 None:intergenic
TATTCCAAAAGAATTGAAAT+TGG 0.264436 2_3:-43775085 Msa0293370:CDS
TTCCATGATCTTTAGTCATA+TGG 0.300810 2_3:+43766479 None:intergenic
GCGCCAAACGTCGTTATATA+TGG 0.320087 2_3:-43775754 Msa0293370:five_prime_UTR
TTTCATCAACATTTGTTAAA+GGG 0.337451 2_3:+43766539 None:intergenic
TTGAACATTTAGATGATCAT+TGG 0.349247 2_3:+43767753 None:intergenic
CTTTCTCTGCTTTCACAAGA+TGG 0.361340 2_3:+43775118 None:intergenic
GTAGAACCAAAATCTTCATC+TGG 0.383328 2_3:-43775276 Msa0293370:CDS
GAGCACTGATAAAGAACAAT+AGG 0.395901 2_3:+43766373 None:intergenic
CAAGAGTACTTAAGGAGGTT+AGG 0.401156 2_3:+43767158 None:intergenic
CAATCTGGCAAGAGTACTTA+AGG 0.405539 2_3:+43767150 None:intergenic
TAACCATATATAACGACGTT+TGG 0.415383 2_3:+43775751 None:intergenic
ATGCTTTCAACAATTTCATA+AGG 0.416486 2_3:-43775539 Msa0293370:intron
TGATAGCAGTGCCTGCTTTG+AGG 0.417708 2_3:-43767342 Msa0293370:intron
TGAACATTTAGATGATCATT+GGG 0.419933 2_3:+43767754 None:intergenic
TTAAACTTGAGTGTTAATAT+CGG 0.424529 2_3:+43766421 None:intergenic
GGAACAGGGCTTACAGTAGT+AGG 0.440535 2_3:+43766337 None:intergenic
TGCATCGAGAGATTTGATTT+CGG 0.456818 2_3:+43767726 None:intergenic
GGCCAAACCTGCATTCAATC+TGG 0.460342 2_3:+43767135 None:intergenic
ATCCATATGACTAAAGATCA+TGG 0.465990 2_3:-43766481 Msa0293370:CDS
AAACCTCCATGGATATTTAG+AGG 0.467483 2_3:-43775246 Msa0293370:CDS
ACCTCATCAAAGGCACCGAC+TGG 0.476368 2_3:+43774886 None:intergenic
CACAAGATGGAGTTGATACA+AGG 0.485373 2_3:+43775131 None:intergenic
GAAATGATTTACCTAAAACT+TGG 0.487429 2_3:+43767280 None:intergenic
CTGCTTTGAGGTTTGACCGT+TGG 0.488455 2_3:-43767330 Msa0293370:CDS
TTTGAGGTTTGACCGTTGGA+TGG 0.490339 2_3:-43767326 Msa0293370:CDS
TTGAGGTTTGACCGTTGGAT+GGG 0.491225 2_3:-43767325 Msa0293370:CDS
ATTATTTACAGATACACTCT+TGG 0.492344 2_3:-43774940 Msa0293370:intron
CCAAAATCTTCATCTGGGTA+TGG 0.509658 2_3:-43775270 Msa0293370:CDS
CTTGTGAGACTTATATTACA+AGG 0.511170 2_3:+43767697 None:intergenic
ATCATTGGGATTGCGGAACT+CGG 0.513694 2_3:+43767768 None:intergenic
ATTTACAGATACACTCTTGG+TGG 0.519326 2_3:-43774937 Msa0293370:intron
AAGTAAAGTAGTGGAATATG+TGG 0.521558 2_3:+43775667 None:intergenic
GAAAGCATGGTGTATAAGAA+TGG 0.524109 2_3:+43775554 None:intergenic
TGAGGTTTGACCGTTGGATG+GGG 0.524143 2_3:-43767324 Msa0293370:CDS
TAGCATAAGAAGTAAAGTAG+TGG 0.524756 2_3:+43775658 None:intergenic
ATTCTTTCTAGCTAGTTATG+AGG 0.526508 2_3:-43774914 Msa0293370:CDS
AATGATCTTGAAACATTCAA+AGG 0.526748 2_3:+43766562 None:intergenic
AATATAAGTCTCACAAGTGC+TGG 0.527940 2_3:-43767691 Msa0293370:intron
TCTTCTCATTCTTTCAACAA+AGG 0.528821 2_3:-43775624 Msa0293370:five_prime_UTR
TTAGATGATCATTGGGATTG+CGG 0.530128 2_3:+43767761 None:intergenic
GTGGAATATGTGGAAATGAA+TGG 0.531426 2_3:+43775677 None:intergenic
GGAAAATCTAGCTACTTGAC+TGG 0.532788 2_3:+43772252 None:intergenic
TACCTTCCTCTAAATATCCA+TGG 0.538342 2_3:+43775240 None:intergenic
AATTACATTCATAAGCAAGA+AGG 0.538902 2_3:+43766252 None:intergenic
ACTCTTGCCAGATTGAATGC+AGG 0.543041 2_3:-43767142 Msa0293370:intron
CTCCATGGATATTTAGAGGA+AGG 0.543914 2_3:-43775242 Msa0293370:intron
CTGGGTATGGTAAACCTCCA+TGG 0.558679 2_3:-43775257 Msa0293370:CDS
TCCAGTCGGTGCCTTTGATG+AGG 0.560782 2_3:-43774887 Msa0293370:intron
AGACAATCACAAGGCAGGAG+TGG 0.566940 2_3:-43767817 Msa0293370:CDS
TAATCGTTGGCCCCATCCAA+CGG 0.567276 2_3:+43767314 None:intergenic
CAAACTTTACAAGACTATGA+AGG 0.570719 2_3:-43766508 Msa0293370:CDS
TCTCAAGACAATCACAAGGC+AGG 0.576119 2_3:-43767822 Msa0293370:CDS
TAGAACCAAAATCTTCATCT+GGG 0.581891 2_3:-43775275 Msa0293370:CDS
TTATGAAATTGTTGAAAGCA+TGG 0.587379 2_3:+43775541 None:intergenic
CAACGGTCAAACCTCAAAGC+AGG 0.590172 2_3:+43767331 None:intergenic
GAAAATCTAGCTACTTGACT+GGG 0.603464 2_3:+43772253 None:intergenic
CGGTTTCGATAACATCACAT+AGG 0.621776 2_3:+43766441 None:intergenic
ATATAACGACGTTTGGCGCG+CGG 0.663679 2_3:+43775758 None:intergenic
CTTCCTCTAAATATCCATGG+AGG 0.672028 2_3:+43775243 None:intergenic
AGTTATGAGGACAGTCCAGT+CGG 0.672342 2_3:-43774901 Msa0293370:CDS
TCTGGCAAGAGTACTTAAGG+AGG 0.687464 2_3:+43767153 None:intergenic
GCAGTCTCAAGACAATCACA+AGG 0.719132 2_3:-43767826 Msa0293370:CDS
GTCCACACAAAACGACACAG+TGG 0.745105 2_3:-43775719 Msa0293370:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAATTATTTTTTTTTA+GGG + chr2_3:43768098-43768117 None:intergenic 0.0%
!! TTAAAATTAAAATATATTAA+TGG - chr2_3:43769907-43769926 Msa0293370:intron 0.0%
!! AAAATGCTATATAAATAATA+TGG + chr2_3:43766402-43766421 None:intergenic 10.0%
!!! AATTAGTGTATATTTTTATA+AGG + chr2_3:43766453-43766472 None:intergenic 10.0%
!!! TAATTTTATTTAATTTGAGA+TGG - chr2_3:43767087-43767106 Msa0293370:intron 10.0%
!! AATTTAATGATTAAAAAAGA+TGG - chr2_3:43767322-43767341 Msa0293370:CDS 10.0%
!!! AACTTTTTTTTTTTTTTTTG+AGG - chr2_3:43768634-43768653 Msa0293370:intron 10.0%
!!! ACTTTTTTTTTTTTTTTTGA+GGG - chr2_3:43768635-43768654 Msa0293370:intron 10.0%
!! TAAATAAATAATTCACAAAA+AGG + chr2_3:43769108-43769127 None:intergenic 10.0%
!!! AATTTTATTTATCTTATTTC+CGG - chr2_3:43769185-43769204 Msa0293370:intron 10.0%
!! TAAAAAATAAATAAATACCT+TGG + chr2_3:43769612-43769631 None:intergenic 10.0%
!!! ATAATATTTTTAAATTTGGT+AGG + chr2_3:43770106-43770125 None:intergenic 10.0%
!!! TTAAGTTTGAAATATTATTT+AGG - chr2_3:43770689-43770708 Msa0293370:intron 10.0%
!!! ATATAAATTTTAAATTTGGT+AGG - chr2_3:43773689-43773708 Msa0293370:intron 10.0%
!!! TTTTTAAATATGATTCAAAT+TGG - chr2_3:43774047-43774066 Msa0293370:intron 10.0%
!! GTTATTTAACAAATTATTAT+AGG - chr2_3:43775240-43775259 Msa0293370:intron 10.0%
!!! TCATTTTTATGTTTTTTTTG+AGG - chr2_3:43767528-43767547 Msa0293370:intron 15.0%
!!! CATTTTTATGTTTTTTTTGA+GGG - chr2_3:43767529-43767548 Msa0293370:intron 15.0%
!!! ATTTTTATGTTTTTTTTGAG+GGG - chr2_3:43767530-43767549 Msa0293370:intron 15.0%
!!! TTTTGGTTTATTATAAATGA+TGG - chr2_3:43768114-43768133 Msa0293370:intron 15.0%
!! AAAAGTTCTTATATCAAATA+TGG + chr2_3:43768621-43768640 None:intergenic 15.0%
!!! ATTAATTTTATGCAATGATT+TGG + chr2_3:43769144-43769163 None:intergenic 15.0%
!! TAAAATATTTATATACCAAG+AGG + chr2_3:43769249-43769268 None:intergenic 15.0%
!!! ATTTATTTTTTGTGAAAAGA+TGG - chr2_3:43769287-43769306 Msa0293370:intron 15.0%
!!! TTTATTTTTTGTGAAAAGAT+GGG - chr2_3:43769288-43769307 Msa0293370:intron 15.0%
!! GAAAATTTATAATGTTTGTT+TGG + chr2_3:43769392-43769411 None:intergenic 15.0%
!! TAAGAATTGTAATAAAAACA+TGG + chr2_3:43769890-43769909 None:intergenic 15.0%
!! ATAGTAAGTAAAAATTAACA+GGG + chr2_3:43770509-43770528 None:intergenic 15.0%
!!! ACGGTTTTTAATATAATTTA+GGG + chr2_3:43770541-43770560 None:intergenic 15.0%
!! GATATATGTTATATAATTCA+AGG + chr2_3:43770573-43770592 None:intergenic 15.0%
!!! CTTATTTAATGATATTTTCA+AGG + chr2_3:43770660-43770679 None:intergenic 15.0%
!! CAATAAATGAAAAGAAATTA+AGG + chr2_3:43772978-43772997 None:intergenic 15.0%
!!! TTTTATTTTCTTTATGTCAT+AGG - chr2_3:43773472-43773491 Msa0293370:intron 15.0%
!!! TAAGTAATTTAAGTGTTATT+TGG - chr2_3:43773607-43773626 Msa0293370:intron 15.0%
!!! TGTTTTCATTTTTAATTAGA+TGG + chr2_3:43773809-43773828 None:intergenic 15.0%
!! ATTAAAAATGAAAACAAACA+TGG - chr2_3:43773813-43773832 Msa0293370:intron 15.0%
!!! ATATATAAACCATTTTTGTA+AGG - chr2_3:43773844-43773863 Msa0293370:intron 15.0%
!! CAAATTGATAAAAATGTTAT+AGG - chr2_3:43774377-43774396 Msa0293370:intron 15.0%
!!! ATTGAAATAGTTTTAAATTG+TGG + chr2_3:43775187-43775206 None:intergenic 15.0%
!! ACATAATCTATATGAATTTA+AGG + chr2_3:43775674-43775693 None:intergenic 15.0%
!! TTCATATAGATTATGTTATT+TGG - chr2_3:43775678-43775697 Msa0293370:five_prime_UTR 15.0%
!!! AAACTTATTTTCTAAATGTA+GGG + chr2_3:43775705-43775724 None:intergenic 15.0%
!!! TAAACTTATTTTCTAAATGT+AGG + chr2_3:43775706-43775725 None:intergenic 15.0%
!! GTTTATGAAATAAGCAAAAT+GGG + chr2_3:43766354-43766373 None:intergenic 20.0%
!! TGTTTATGAAATAAGCAAAA+TGG + chr2_3:43766355-43766374 None:intergenic 20.0%
!!! TACTAAAAAGTGACAAATTT+TGG - chr2_3:43766516-43766535 Msa0293370:CDS 20.0%
!! TATTCCAAAAGAATTGAAAT+TGG - chr2_3:43766755-43766774 Msa0293370:intron 20.0%
!!! AATTTCTTATTGTTTTCTCA+AGG - chr2_3:43766842-43766861 Msa0293370:intron 20.0%
!! ATGCAAAAATAGAAATGAAA+AGG + chr2_3:43767272-43767291 None:intergenic 20.0%
!! AAAAATGATCTTTCTACATT+CGG + chr2_3:43767516-43767535 None:intergenic 20.0%
!!! TTTTTATGTTTTTTTTGAGG+GGG - chr2_3:43767531-43767550 Msa0293370:intron 20.0%
!! ATAATGATATGCATGTTATT+TGG - chr2_3:43767557-43767576 Msa0293370:intron 20.0%
!!! TAAAAAAATTGATTCACTAC+AGG - chr2_3:43767727-43767746 Msa0293370:CDS 20.0%
!!! AAAAAAATTGATTCACTACA+GGG - chr2_3:43767728-43767747 Msa0293370:CDS 20.0%
!!! ATGTAAATATTACCCTTTTT+GGG + chr2_3:43767977-43767996 None:intergenic 20.0%
!!! AATGTAAATATTACCCTTTT+TGG + chr2_3:43767978-43767997 None:intergenic 20.0%
!! TTATTGAGTGAAACTTAAAA+TGG - chr2_3:43768171-43768190 Msa0293370:intron 20.0%
!! ATATATGGAGAATATCATTT+AGG + chr2_3:43768226-43768245 None:intergenic 20.0%
!!! TCAAATTTTTGCATTGTTTA+TGG - chr2_3:43768425-43768444 Msa0293370:intron 20.0%
!!! CAAATTTTTGCATTGTTTAT+GGG - chr2_3:43768426-43768445 Msa0293370:intron 20.0%
!! TATAAGAACTTATACTAGTA+AGG - chr2_3:43768666-43768685 Msa0293370:intron 20.0%
!!! TTCTTCTTTTTTAATGATCA+CGG - chr2_3:43768863-43768882 Msa0293370:intron 20.0%
!! GACAAGATTGTATTAAAAAT+TGG + chr2_3:43768902-43768921 None:intergenic 20.0%
!!! GAGTTTTTTTATTTTGGTTA+AGG - chr2_3:43768964-43768983 Msa0293370:intron 20.0%
!! TAATTCACAAAAAGGTTATA+TGG + chr2_3:43769100-43769119 None:intergenic 20.0%
!!! CAAATATTTGGTTTCAAATA+TGG + chr2_3:43769520-43769539 None:intergenic 20.0%
!!! AAACAAAATACCCTTTATTT+AGG - chr2_3:43769802-43769821 Msa0293370:intron 20.0%
!! GATAGTAAGTAAAAATTAAC+AGG + chr2_3:43770510-43770529 None:intergenic 20.0%
!!! GACGGTTTTTAATATAATTT+AGG + chr2_3:43770542-43770561 None:intergenic 20.0%
!!! ATTGAATGTTTTCTGAATTA+GGG + chr2_3:43771097-43771116 None:intergenic 20.0%
!! GTAGTTAGTGATATAATTTA+GGG + chr2_3:43771129-43771148 None:intergenic 20.0%
!! TTGAATTCAAAAAGTAAAAC+TGG - chr2_3:43771749-43771768 Msa0293370:intron 20.0%
!! TAACACTTGAAAATATACAT+CGG + chr2_3:43772738-43772757 None:intergenic 20.0%
!!! TATTTTCAAGTGTTAGATTT+TGG - chr2_3:43772743-43772762 Msa0293370:intron 20.0%
!!! TTAGTTTTCATGTTTTGTTA+TGG - chr2_3:43773414-43773433 Msa0293370:intron 20.0%
!! CTTAACAAAAACTGAAATTT+AGG + chr2_3:43773591-43773610 None:intergenic 20.0%
!!! TTAAGTGTTATTTGGAATTA+TGG - chr2_3:43773615-43773634 Msa0293370:intron 20.0%
!! TATGTCAATTACATTTAGAA+GGG + chr2_3:43774454-43774473 None:intergenic 20.0%
!! TTATGTCAATTACATTTAGA+AGG + chr2_3:43774455-43774474 None:intergenic 20.0%
!! TTCTAAATGTAATTGACATA+AGG - chr2_3:43774454-43774473 Msa0293370:intron 20.0%
!! TTAAAACTATTTCAATACTG+TGG - chr2_3:43775191-43775210 Msa0293370:intron 20.0%
!!! TTTCATCAACATTTGTTAAA+GGG + chr2_3:43775304-43775323 None:intergenic 20.0%
!!! TTTTCATCAACATTTGTTAA+AGG + chr2_3:43775305-43775324 None:intergenic 20.0%
!! TTAAACTTGAGTGTTAATAT+CGG + chr2_3:43775422-43775441 None:intergenic 20.0%
!! TGAAAAATGGGATTTCTTTT+AGG + chr2_3:43766258-43766277 None:intergenic 25.0%
! ATGGAATTGATGTGAAAAAT+GGG + chr2_3:43766270-43766289 None:intergenic 25.0%
! AATGGAATTGATGTGAAAAA+TGG + chr2_3:43766271-43766290 None:intergenic 25.0%
! TTATGAAATTGTTGAAAGCA+TGG + chr2_3:43766302-43766321 None:intergenic 25.0%
! ATGCTTTCAACAATTTCATA+AGG - chr2_3:43766301-43766320 Msa0293370:three_prime_UTR 25.0%
!! GATAAACTAGTCACATTTTA+AGG + chr2_3:43766428-43766447 None:intergenic 25.0%
!!! TGGATTTTTTTTGTAGTTCA+TGG - chr2_3:43766536-43766555 Msa0293370:CDS 25.0%
!! TCAACCAATTTCAATTCTTT+TGG + chr2_3:43766762-43766781 None:intergenic 25.0%
! ATTATTTACAGATACACTCT+TGG - chr2_3:43766900-43766919 Msa0293370:intron 25.0%
! AGTAGTTATTGAAAATTTGC+TGG - chr2_3:43767111-43767130 Msa0293370:intron 25.0%
!!! AAATTTGCTGGTAGTATATT+TGG - chr2_3:43767123-43767142 Msa0293370:intron 25.0%
! TTAAAAAAGATGGAGAAGAA+TGG - chr2_3:43767332-43767351 Msa0293370:CDS 25.0%
!!! ATGCATTTTTTCAATGACAT+GGG + chr2_3:43767393-43767412 None:intergenic 25.0%
!!! AATGCATTTTTTCAATGACA+TGG + chr2_3:43767394-43767413 None:intergenic 25.0%
! GTACATATATCCTTGTTAAA+CGG + chr2_3:43767465-43767484 None:intergenic 25.0%
! AAAATGATCTTTCTACATTC+GGG + chr2_3:43767515-43767534 None:intergenic 25.0%
!! GAACTTTCATTGATAGTTAA+AGG - chr2_3:43767602-43767621 Msa0293370:intron 25.0%
! TTAAAATAAGCGCAAATTGT+TGG - chr2_3:43767653-43767672 Msa0293370:intron 25.0%
!!! AGAGTTTTTTTAAGCTTCAA+TGG + chr2_3:43767698-43767717 None:intergenic 25.0%
!! TTTTATATTTGATCTAGGCA+TGG + chr2_3:43767877-43767896 None:intergenic 25.0%
! ATGCCTAGATCAAATATAAA+AGG - chr2_3:43767876-43767895 Msa0293370:intron 25.0%
! TGCCTAGATCAAATATAAAA+GGG - chr2_3:43767877-43767896 Msa0293370:intron 25.0%
! TTTAGATAATGACCCAAAAA+GGG - chr2_3:43767962-43767981 Msa0293370:intron 25.0%
!! GATATTCTCCATATATTTTG+AGG - chr2_3:43768230-43768249 Msa0293370:intron 25.0%
! CTTCATTTCCTCAAAATATA+TGG + chr2_3:43768241-43768260 None:intergenic 25.0%
!!! TATATTTTGAGGAAATGAAG+AGG - chr2_3:43768241-43768260 Msa0293370:intron 25.0%
! TTTGTAGGACTAAATATTTC+TGG - chr2_3:43768471-43768490 Msa0293370:intron 25.0%
! TATATCAAATATGGTGTATC+TGG + chr2_3:43768612-43768631 None:intergenic 25.0%
! AAAAATTGATGAGCTCATTA+TGG + chr2_3:43768773-43768792 None:intergenic 25.0%
!!! TCTTCTTTTTTAATGATCAC+GGG - chr2_3:43768864-43768883 Msa0293370:intron 25.0%
! CAAAATAAAAAAACTCAACC+AGG + chr2_3:43768960-43768979 None:intergenic 25.0%
!!! CTGGTTGAGTTTTTTTATTT+TGG - chr2_3:43768958-43768977 Msa0293370:intron 25.0%
! CTCCAATATCAAAAAGTTTA+TGG + chr2_3:43769043-43769062 None:intergenic 25.0%
! ATTAATCACTTCAATTTGTG+AGG - chr2_3:43769158-43769177 Msa0293370:intron 25.0%
!! TTTATTTATCTTATTTCCGG+TGG - chr2_3:43769188-43769207 Msa0293370:intron 25.0%
!!! AACTAGCATTTTTTTTCTAC+AGG - chr2_3:43769553-43769572 Msa0293370:intron 25.0%
!!! ATTTTTTTTCTACAGGATGT+GGG - chr2_3:43769560-43769579 Msa0293370:intron 25.0%
! ATCATTGCATTTAATCTTTG+AGG - chr2_3:43769640-43769659 Msa0293370:intron 25.0%
!! TTTGAGATCTCCTAAATAAA+GGG + chr2_3:43769815-43769834 None:intergenic 25.0%
!!! TTTTGAGATCTCCTAAATAA+AGG + chr2_3:43769816-43769835 None:intergenic 25.0%
! CTCAAAAATTAAACTGTAGA+AGG - chr2_3:43769829-43769848 Msa0293370:intron 25.0%
! TTGATTCATATGCATATGTT+TGG + chr2_3:43770136-43770155 None:intergenic 25.0%
! ATTGAGATATGACAAATTCA+GGG + chr2_3:43770315-43770334 None:intergenic 25.0%
! TAATTCAAGGACTTATTTGA+CGG + chr2_3:43770560-43770579 None:intergenic 25.0%
!! CATGTTTAGATTATGCTTTT+TGG + chr2_3:43770833-43770852 None:intergenic 25.0%
!! GATTGAATGTTTTCTGAATT+AGG + chr2_3:43771098-43771117 None:intergenic 25.0%
! GGTAGTTAGTGATATAATTT+AGG + chr2_3:43771130-43771149 None:intergenic 25.0%
! TTTAATCTTAAGGATCGATT+TGG + chr2_3:43771151-43771170 None:intergenic 25.0%
! TGTATGACTGTTTAATCTTA+AGG + chr2_3:43771161-43771180 None:intergenic 25.0%
! TTTAAACTTCATTACATGCT+TGG + chr2_3:43771433-43771452 None:intergenic 25.0%
! TGAAAACGAAAATCACAAAA+CGG - chr2_3:43771476-43771495 Msa0293370:intron 25.0%
! GAAAATGAAGATGGATATAA+TGG + chr2_3:43772281-43772300 None:intergenic 25.0%
! GAATCAACATTAAATTGATG+AGG + chr2_3:43772339-43772358 None:intergenic 25.0%
! TGTTCAATGTTCATACATAA+AGG + chr2_3:43772524-43772543 None:intergenic 25.0%
!!! AGATTTTCAAGTGTTAGATT+TGG + chr2_3:43772780-43772799 None:intergenic 25.0%
!! TTCTTTTCATTTATTGTTCC+TGG - chr2_3:43772982-43773001 Msa0293370:intron 25.0%
! GAAAAATATAACGTCATTCA+TGG + chr2_3:43773044-43773063 None:intergenic 25.0%
!! GAATGACGTTATATTTTTCA+TGG - chr2_3:43773045-43773064 Msa0293370:intron 25.0%
! GAATCAATATCAAATTGAAG+AGG - chr2_3:43773214-43773233 Msa0293370:intron 25.0%
! TTCTCAATTATGAACAAGAA+TGG + chr2_3:43773249-43773268 None:intergenic 25.0%
! AATTGAGAAGATGAACATTA+TGG - chr2_3:43773260-43773279 Msa0293370:intron 25.0%
! AGGTGAAGAAGATAATAAAA+TGG - chr2_3:43773319-43773338 Msa0293370:intron 25.0%
! TGAAGAAGATAATAAAATGG+AGG - chr2_3:43773322-43773341 Msa0293370:intron 25.0%
! TTTAGAAGACCTTACAAAAA+TGG + chr2_3:43773856-43773875 None:intergenic 25.0%
!! TTCTTGTCTTATAAGGTATT+TGG + chr2_3:43773918-43773937 None:intergenic 25.0%
! TGAACATTTAGATGATCATT+GGG + chr2_3:43774089-43774108 None:intergenic 25.0%
! TTGAACATTTAGATGATCAT+TGG + chr2_3:43774090-43774109 None:intergenic 25.0%
! GAAATGATTTACCTAAAACT+TGG + chr2_3:43774563-43774582 None:intergenic 25.0%
! AATTTCTTTCAAAATTGCAG+TGG - chr2_3:43774643-43774662 Msa0293370:intron 25.0%
!!! GCAATTGGAGTTTTAAATAA+GGG + chr2_3:43775132-43775151 None:intergenic 25.0%
!!! TGCAATTGGAGTTTTAAATA+AGG + chr2_3:43775133-43775152 None:intergenic 25.0%
! AATGATCTTGAAACATTCAA+AGG + chr2_3:43775281-43775300 None:intergenic 25.0%
!! CTTAAAACTACAGACTTTTA+TGG + chr2_3:43775527-43775546 None:intergenic 25.0%
!!! CATAAAAGTCTGTAGTTTTA+AGG - chr2_3:43775525-43775544 Msa0293370:intron 25.0%
! AATTACATTCATAAGCAAGA+AGG + chr2_3:43775591-43775610 None:intergenic 25.0%
TAACCATATATAACGACGTT+TGG + chr2_3:43766092-43766111 None:intergenic 30.0%
! AAGTAAAGTAGTGGAATATG+TGG + chr2_3:43766176-43766195 None:intergenic 30.0%
TAGCATAAGAAGTAAAGTAG+TGG + chr2_3:43766185-43766204 None:intergenic 30.0%
TCTTCTCATTCTTTCAACAA+AGG - chr2_3:43766216-43766235 Msa0293370:three_prime_UTR 30.0%
TATGAAATAAGCAAAATGGG+AGG + chr2_3:43766351-43766370 None:intergenic 30.0%
TGTTACTAACTTACTGTTAC+TGG + chr2_3:43766481-43766500 None:intergenic 30.0%
TAGAACCAAAATCTTCATCT+GGG - chr2_3:43766565-43766584 Msa0293370:CDS 30.0%
! TTGAAATTGGTTGAAGCTTT+TGG - chr2_3:43766768-43766787 Msa0293370:intron 30.0%
! TGAAATTGGTTGAAGCTTTT+GGG - chr2_3:43766769-43766788 Msa0293370:intron 30.0%
TTAGTGCATTCATCATTTCA+AGG + chr2_3:43766881-43766900 None:intergenic 30.0%
!! ATTCTTTCTAGCTAGTTATG+AGG - chr2_3:43766926-43766945 Msa0293370:intron 30.0%
TAAAAACAGAACCTCATCAA+AGG + chr2_3:43766967-43766986 None:intergenic 30.0%
! CTGACATTAGAATTTTGTGT+CGG - chr2_3:43767183-43767202 Msa0293370:intron 30.0%
AAAGGAGCAACCAAATTATT+CGG - chr2_3:43767620-43767639 Msa0293370:intron 30.0%
CATTTCCTTACCGAATAATT+TGG + chr2_3:43767633-43767652 None:intergenic 30.0%
! GACCCTTTTATATTTGATCT+AGG + chr2_3:43767882-43767901 None:intergenic 30.0%
TATAAAAGGGTCATGCTAAA+TGG - chr2_3:43767890-43767909 Msa0293370:intron 30.0%
! TTTGACTTCTTAACCAATGT+TGG + chr2_3:43767919-43767938 None:intergenic 30.0%
GTTTAGATAATGACCCAAAA+AGG - chr2_3:43767961-43767980 Msa0293370:intron 30.0%
TCTCTTATAACAAAGATGAG+AGG - chr2_3:43768198-43768217 Msa0293370:intron 30.0%
!! CAGCAAAGTATTGATAATCA+AGG - chr2_3:43768558-43768577 Msa0293370:intron 30.0%
!!! CTTCTTTTTTAATGATCACG+GGG - chr2_3:43768865-43768884 Msa0293370:intron 30.0%
GAGTTGTTGTAAAATCATAG+TGG - chr2_3:43769017-43769036 Msa0293370:intron 30.0%
! GGCCATAAACTTTTTGATAT+TGG - chr2_3:43769038-43769057 Msa0293370:intron 30.0%
TTCACAAAAAGGTTATATGG+TGG + chr2_3:43769097-43769116 None:intergenic 30.0%
!!! CTGTGTAATTTTTTTCCTCT+TGG - chr2_3:43769231-43769250 Msa0293370:intron 30.0%
GGTGGGAGAAAAATAATTTA+TGG - chr2_3:43769360-43769379 Msa0293370:intron 30.0%
TTGGTTTCAAATATGGTGAT+TGG + chr2_3:43769513-43769532 None:intergenic 30.0%
TTGAAACCAAATATTTGTGC+TGG - chr2_3:43769523-43769542 Msa0293370:intron 30.0%
TGAAACCAAATATTTGTGCT+GGG - chr2_3:43769524-43769543 Msa0293370:intron 30.0%
!!! CATTTTTTTTCTACAGGATG+TGG - chr2_3:43769559-43769578 Msa0293370:intron 30.0%
!!! TTTTTTTTCTACAGGATGTG+GGG - chr2_3:43769561-43769580 Msa0293370:intron 30.0%
!! GATGGTTTTTGAAAAAAGAG+AGG - chr2_3:43769715-43769734 Msa0293370:intron 30.0%
! AAGATATAGAGGATTTTGAG+AGG - chr2_3:43769747-43769766 Msa0293370:intron 30.0%
!! AGATATAGAGGATTTTGAGA+GGG - chr2_3:43769748-43769767 Msa0293370:intron 30.0%
!!! AAACTGTAGAAGGTTTTGAA+TGG - chr2_3:43769839-43769858 Msa0293370:intron 30.0%
TTAAAGGGCTGGAAATATAA+AGG + chr2_3:43769999-43770018 None:intergenic 30.0%
GTGATCACTAGATTGTAATA+CGG - chr2_3:43770070-43770089 Msa0293370:intron 30.0%
GATTGAGATATGACAAATTC+AGG + chr2_3:43770316-43770335 None:intergenic 30.0%
AAATCAATCAATTTCGTCCT+TGG + chr2_3:43770463-43770482 None:intergenic 30.0%
TTCTGTAAATATGTGCTTCA+AGG + chr2_3:43770605-43770624 None:intergenic 30.0%
AAGAAGTCATAAGTCATAGA+AGG - chr2_3:43770737-43770756 Msa0293370:intron 30.0%
TTAAATTATGTCCCCTAGTT+GGG + chr2_3:43770795-43770814 None:intergenic 30.0%
TTTAAATTATGTCCCCTAGT+TGG + chr2_3:43770796-43770815 None:intergenic 30.0%
AGAGTTCCATATCCAAATTA+TGG + chr2_3:43770932-43770951 None:intergenic 30.0%
TGATTGAAAATGTTGTTGCA+GGG + chr2_3:43771067-43771086 None:intergenic 30.0%
ATGATTGAAAATGTTGTTGC+AGG + chr2_3:43771068-43771087 None:intergenic 30.0%
!! AATTTTGGAAATGTTGTTGC+TGG + chr2_3:43771247-43771266 None:intergenic 30.0%
! ACTGCTGAAAATGTCAATTT+TGG + chr2_3:43771262-43771281 None:intergenic 30.0%
AATCTTGTTGCTGTAAATGA+TGG + chr2_3:43771298-43771317 None:intergenic 30.0%
GAAGATTTCGTCATTTCATA+AGG + chr2_3:43771559-43771578 None:intergenic 30.0%
GACGAAATCTTCTATCAAAA+AGG - chr2_3:43771567-43771586 Msa0293370:intron 30.0%
! AAAAGGTATGGGTATTACAA+GGG - chr2_3:43771703-43771722 Msa0293370:intron 30.0%
! TTTTAGCGTTTCCATCAAAT+TGG - chr2_3:43771775-43771794 Msa0293370:intron 30.0%
! ATGGACGTTTGTTAAATTCA+GGG - chr2_3:43771903-43771922 Msa0293370:intron 30.0%
!!! TTTTTAGGTGTGATATGCAA+CGG + chr2_3:43772055-43772074 None:intergenic 30.0%
! TTGGGGTTTAAGGAATTTTT+AGG + chr2_3:43772070-43772089 None:intergenic 30.0%
!! TTTGTAAGTGTCATTTGCTA+TGG + chr2_3:43772095-43772114 None:intergenic 30.0%
AATTCCCAAACAATTCATGT+TGG - chr2_3:43772201-43772220 Msa0293370:intron 30.0%
TTCTCCAACATGAATTGTTT+GGG + chr2_3:43772208-43772227 None:intergenic 30.0%
TTGGAAGATGAAAATGAAGA+TGG + chr2_3:43772290-43772309 None:intergenic 30.0%
ATATTTAGGCGAAGATGAAT+TGG + chr2_3:43772309-43772328 None:intergenic 30.0%
ACATTAAATTGATGAGGATG+AGG + chr2_3:43772333-43772352 None:intergenic 30.0%
!!! TTCTTCTCCCTTTTTTTTCT+TGG - chr2_3:43772437-43772456 Msa0293370:intron 30.0%
! AGATTGGCCAAGAAAAAAAA+GGG + chr2_3:43772447-43772466 None:intergenic 30.0%
! AAGATTGGCCAAGAAAAAAA+AGG + chr2_3:43772448-43772467 None:intergenic 30.0%
TGTTATGGCTAATTCAAGAT+TGG + chr2_3:43772463-43772482 None:intergenic 30.0%
! GAATGACGTTGTATTTGTTA+TGG + chr2_3:43772478-43772497 None:intergenic 30.0%
GAAAATATACATCGGCATAT+TGG + chr2_3:43772730-43772749 None:intergenic 30.0%
ACTTGAAAATCTACACCAAT+TGG - chr2_3:43772788-43772807 Msa0293370:intron 30.0%
!!! TCATGGTTTTTTGCTTCAAA+CGG + chr2_3:43773027-43773046 None:intergenic 30.0%
TTTCATGGCTAATTCAAGAT+TGG - chr2_3:43773060-43773079 Msa0293370:intron 30.0%
! AAATGAAGTTTGATGACCAT+TGG - chr2_3:43773113-43773132 Msa0293370:intron 30.0%
!!! CATTGGTTTTGATGATGATT+GGG - chr2_3:43773130-43773149 Msa0293370:intron 30.0%
!!! TTTTGATGATGATTGGGTTA+TGG - chr2_3:43773136-43773155 Msa0293370:intron 30.0%
!! TTTGATGATGATTGGGTTAT+GGG - chr2_3:43773137-43773156 Msa0293370:intron 30.0%
ATATCAAATTGAAGAGGATG+AGG - chr2_3:43773220-43773239 Msa0293370:intron 30.0%
! ACGTCTCTTAAGATGTTTTT+AGG - chr2_3:43773514-43773533 Msa0293370:intron 30.0%
! GTCTTATAAGGTATTTGGAA+GGG + chr2_3:43773913-43773932 None:intergenic 30.0%
! TGTCTTATAAGGTATTTGGA+AGG + chr2_3:43773914-43773933 None:intergenic 30.0%
! GGACATTTTCTTGTCTTATA+AGG + chr2_3:43773925-43773944 None:intergenic 30.0%
GGTGTAGATTTAAGAGAATT+TGG + chr2_3:43773946-43773965 None:intergenic 30.0%
TTATATGAATGCTTAGTGTG+TGG + chr2_3:43773967-43773986 None:intergenic 30.0%
CTTGTGAGACTTATATTACA+AGG + chr2_3:43774146-43774165 None:intergenic 30.0%
GATGATACATCATACATCTT+TGG - chr2_3:43774190-43774209 Msa0293370:intron 30.0%
CTTATTTCATACCTTCGTTT+CGG - chr2_3:43774263-43774282 Msa0293370:intron 30.0%
! TCACAGTGTTATTGTAAGTA+GGG + chr2_3:43774729-43774748 None:intergenic 30.0%
! TTCACAGTGTTATTGTAAGT+AGG + chr2_3:43774730-43774749 None:intergenic 30.0%
TGATCTAATGATCACTAATG+TGG - chr2_3:43774832-43774851 Msa0293370:intron 30.0%
!! CTGAGCTTTATTTAAAATCC+TGG + chr2_3:43774984-43775003 None:intergenic 30.0%
TATTAAACTCTGTTGTATCG+CGG + chr2_3:43775022-43775041 None:intergenic 30.0%
! TTGCAGTTACATTGCAATTT+TGG + chr2_3:43775048-43775067 None:intergenic 30.0%
!!! GAGTTTTAAATAAGGGTCAT+GGG + chr2_3:43775125-43775144 None:intergenic 30.0%
AACTATATTGTGGATGCAAT+TGG + chr2_3:43775147-43775166 None:intergenic 30.0%
ATTGCATCCACAATATAGTT+TGG - chr2_3:43775147-43775166 Msa0293370:intron 30.0%
CAAACTTTACAAGACTATGA+AGG - chr2_3:43775332-43775351 Msa0293370:intron 30.0%
ATCCATATGACTAAAGATCA+TGG - chr2_3:43775359-43775378 Msa0293370:intron 30.0%
TTCCATGATCTTTAGTCATA+TGG + chr2_3:43775364-43775383 None:intergenic 30.0%
GTGGAATATGTGGAAATGAA+TGG + chr2_3:43766166-43766185 None:intergenic 35.0%
! GAAAGCATGGTGTATAAGAA+TGG + chr2_3:43766289-43766308 None:intergenic 35.0%
AAAATGGGAGGTTAGAGTAA+TGG + chr2_3:43766339-43766358 None:intergenic 35.0%
GTAGAACCAAAATCTTCATC+TGG - chr2_3:43766564-43766583 Msa0293370:CDS 35.0%
AAACCTCCATGGATATTTAG+AGG - chr2_3:43766594-43766613 Msa0293370:intron 35.0%
TACCTTCCTCTAAATATCCA+TGG + chr2_3:43766603-43766622 None:intergenic 35.0%
ATTTACAGATACACTCTTGG+TGG - chr2_3:43766903-43766922 Msa0293370:intron 35.0%
!! TGGAGAAGAATGGACTAAAT+AGG - chr2_3:43767342-43767361 Msa0293370:intron 35.0%
AATAGGATTGTGATGCAAGA+TGG - chr2_3:43767359-43767378 Msa0293370:intron 35.0%
!! TTTTTCAATGACATGGGAAC+TGG + chr2_3:43767387-43767406 None:intergenic 35.0%
!!! TACTCTTTTTTGACTTGTCC+CGG - chr2_3:43767434-43767453 Msa0293370:intron 35.0%
AGCAACCAAATTATTCGGTA+AGG - chr2_3:43767625-43767644 Msa0293370:intron 35.0%
! AAATTGATTCACTACAGGGA+CGG - chr2_3:43767732-43767751 Msa0293370:CDS 35.0%
GAAATGAAGAGGATCTTTAC+TGG - chr2_3:43768252-43768271 Msa0293370:intron 35.0%
!! TTCCACATGAGTTGATCAAA+TGG - chr2_3:43768293-43768312 Msa0293370:intron 35.0%
ATCCATTTGATCAACTCATG+TGG + chr2_3:43768298-43768317 None:intergenic 35.0%
TGTTATCCACTATGTACACT+TGG + chr2_3:43768329-43768348 None:intergenic 35.0%
!! TGAAGCATTGGAACTTGAAT+GGG + chr2_3:43768360-43768379 None:intergenic 35.0%
!! GATTCATGCATGCTTTTTGT+AGG - chr2_3:43768456-43768475 Msa0293370:intron 35.0%
TTTAATGATCACGGGGAAAA+AGG - chr2_3:43768872-43768891 Msa0293370:intron 35.0%
!! TCAGATACATTGATTCTACC+TGG - chr2_3:43768926-43768945 Msa0293370:intron 35.0%
CAAAACCCAGCACAAATATT+TGG + chr2_3:43769532-43769551 None:intergenic 35.0%
GAAAATCTAGCTACTTGACT+GGG + chr2_3:43769590-43769609 None:intergenic 35.0%
! TCAAGTAGCTAGATTTTCCA+AGG - chr2_3:43769592-43769611 Msa0293370:intron 35.0%
TACTCGCAAACAAAGTCTTA+GGG + chr2_3:43769678-43769697 None:intergenic 35.0%
ATACTCGCAAACAAAGTCTT+AGG + chr2_3:43769679-43769698 None:intergenic 35.0%
!! GATATAGAGGATTTTGAGAG+GGG - chr2_3:43769749-43769768 Msa0293370:intron 35.0%
GCAAATTCAGGGATGAATTT+GGG + chr2_3:43770244-43770263 None:intergenic 35.0%
TGCAAATTCAGGGATGAATT+TGG + chr2_3:43770245-43770264 None:intergenic 35.0%
AAGTGTGCATTTCGATGAAT+TGG + chr2_3:43770289-43770308 None:intergenic 35.0%
GCAGAGACTAAATTGATTGA+TGG - chr2_3:43770425-43770444 Msa0293370:intron 35.0%
GATGGTGACAAAAATTTCCA+AGG - chr2_3:43770443-43770462 Msa0293370:intron 35.0%
ATGTGCTTCAAGGATCAAAT+TGG + chr2_3:43770595-43770614 None:intergenic 35.0%
ACTTCTTAATGCCCATAGTT+GGG + chr2_3:43770724-43770743 None:intergenic 35.0%
ATCCAAAAAGAAACCCAACT+AGG - chr2_3:43770779-43770798 Msa0293370:intron 35.0%
TCCAAAAAGAAACCCAACTA+GGG - chr2_3:43770780-43770799 Msa0293370:intron 35.0%
TGCATCAAGTATCACTTCTT+TGG - chr2_3:43770851-43770870 Msa0293370:intron 35.0%
! GTATCACTTCTTTGGAAATC+CGG - chr2_3:43770859-43770878 Msa0293370:intron 35.0%
! TATCACTTCTTTGGAAATCC+GGG - chr2_3:43770860-43770879 Msa0293370:intron 35.0%
TTCAACTCAACCTAAGTTCA+TGG + chr2_3:43770900-43770919 None:intergenic 35.0%
TATCCAAATTATGGTCCATC+CGG + chr2_3:43770923-43770942 None:intergenic 35.0%
GATGGACCATAATTTGGATA+TGG - chr2_3:43770923-43770942 Msa0293370:intron 35.0%
! GGCCTCTCATTTGAAATAAT+TGG - chr2_3:43771010-43771029 Msa0293370:intron 35.0%
GGCCAATTATTTCAAATGAG+AGG + chr2_3:43771015-43771034 None:intergenic 35.0%
TTAAACAGTCATACATGTCC+AGG - chr2_3:43771166-43771185 Msa0293370:intron 35.0%
TTTACAGCAACAAGATTTGC+AGG - chr2_3:43771301-43771320 Msa0293370:intron 35.0%
AATGTTGGAAATGATGTACC+AGG + chr2_3:43771376-43771395 None:intergenic 35.0%
GCTGAAAATGCTGAAAATGT+TGG + chr2_3:43771391-43771410 None:intergenic 35.0%
ATCACAAAACGGACACAAAA+AGG - chr2_3:43771487-43771506 Msa0293370:intron 35.0%
TCACAAAACGGACACAAAAA+GGG - chr2_3:43771488-43771507 Msa0293370:intron 35.0%
AGAAAACGAACATGACTGAA+TGG - chr2_3:43771511-43771530 Msa0293370:intron 35.0%
GAATGGAAAACGAACAAGAA+CGG - chr2_3:43771528-43771547 Msa0293370:intron 35.0%
!! GAAGATGATGAAGGTTTTAG+CGG - chr2_3:43771628-43771647 Msa0293370:intron 35.0%
!! AAGATGATGAAGGTTTTAGC+GGG - chr2_3:43771629-43771648 Msa0293370:intron 35.0%
ACTGAAATGTGAGGATGAAA+AGG - chr2_3:43771686-43771705 Msa0293370:intron 35.0%
AATGTGAGGATGAAAAGGTA+TGG - chr2_3:43771691-43771710 Msa0293370:intron 35.0%
! ATGTGAGGATGAAAAGGTAT+GGG - chr2_3:43771692-43771711 Msa0293370:intron 35.0%
! GAAAAGGTATGGGTATTACA+AGG - chr2_3:43771702-43771721 Msa0293370:intron 35.0%
GGGTATTACAAGGGTAAATT+TGG - chr2_3:43771712-43771731 Msa0293370:intron 35.0%
! GATGGACGTTTGTTAAATTC+AGG - chr2_3:43771902-43771921 Msa0293370:intron 35.0%
TGCAAATTCAAGGACGAATT+TGG - chr2_3:43771973-43771992 Msa0293370:intron 35.0%
GCAAATTCAAGGACGAATTT+GGG - chr2_3:43771974-43771993 Msa0293370:intron 35.0%
!!! TGTCATTTGCTATGGTTTTG+GGG + chr2_3:43772087-43772106 None:intergenic 35.0%
!!! GTGTCATTTGCTATGGTTTT+GGG + chr2_3:43772088-43772107 None:intergenic 35.0%
!!! AGTGTCATTTGCTATGGTTT+TGG + chr2_3:43772089-43772108 None:intergenic 35.0%
!! TTTGTTTTCCAGTTCTAGTC+TGG + chr2_3:43772143-43772162 None:intergenic 35.0%
CTTCTCCAACATGAATTGTT+TGG + chr2_3:43772209-43772228 None:intergenic 35.0%
CAAACAATTCATGTTGGAGA+AGG - chr2_3:43772207-43772226 Msa0293370:intron 35.0%
GAAGGTCATAATCACTTAAG+TGG - chr2_3:43772225-43772244 Msa0293370:intron 35.0%
AATGGAGAAGACAATGAAGA+TGG + chr2_3:43772263-43772282 None:intergenic 35.0%
GATGAGGATGAGGAATATTT+AGG + chr2_3:43772323-43772342 None:intergenic 35.0%
! ATGATTGGGTTATGGTCTTA+TGG + chr2_3:43772381-43772400 None:intergenic 35.0%
! TTCTGATGATGATTGGGTTA+TGG + chr2_3:43772389-43772408 None:intergenic 35.0%
ACACCTGAAATGAAGTTTGA+TGG + chr2_3:43772418-43772437 None:intergenic 35.0%
ATATACATCGGCATATTGGT+GGG + chr2_3:43772726-43772745 None:intergenic 35.0%
AATATACATCGGCATATTGG+TGG + chr2_3:43772727-43772746 None:intergenic 35.0%
TGAAAATCTACACCAATTGG+TGG - chr2_3:43772791-43772810 Msa0293370:intron 35.0%
GAAAATCTACACCAATTGGT+GGG - chr2_3:43772792-43772811 Msa0293370:intron 35.0%
GTATGCAGATGGAAAACATT+TGG + chr2_3:43772846-43772865 None:intergenic 35.0%
TCCTGGTTCATACAAAAAGA+AGG - chr2_3:43772999-43773018 Msa0293370:intron 35.0%
! TCCTTCTTTTTGTATGAACC+AGG + chr2_3:43773003-43773022 None:intergenic 35.0%
CCAATCATCATCAAAACCAA+TGG + chr2_3:43773132-43773151 None:intergenic 35.0%
!!! CCATTGGTTTTGATGATGAT+TGG - chr2_3:43773129-43773148 Msa0293370:intron 35.0%
ATGGGTGAAAATGTAGAAGA+TGG - chr2_3:43773155-43773174 Msa0293370:intron 35.0%
!! AGATGGTGGCACTAAAATTT+TGG - chr2_3:43773172-43773191 Msa0293370:intron 35.0%
! TGGCACTAAAATTTTGGATG+AGG - chr2_3:43773178-43773197 Msa0293370:intron 35.0%
TGAGAAGATGAACATTATGG+AGG - chr2_3:43773263-43773282 Msa0293370:intron 35.0%
AGTAGGTCATAATCACTCAA+GGG + chr2_3:43773358-43773377 None:intergenic 35.0%
CAATTCCAAACACTTCATGT+TGG + chr2_3:43773381-43773400 None:intergenic 35.0%
! CATGAAGTGTTTGGAATTGA+AGG - chr2_3:43773382-43773401 Msa0293370:intron 35.0%
AGGTATTTGGAAGGGTTAAA+TGG + chr2_3:43773905-43773924 None:intergenic 35.0%
TTAGATGATCATTGGGATTG+CGG + chr2_3:43774082-43774101 None:intergenic 35.0%
! TGCATCGAGAGATTTGATTT+CGG + chr2_3:43774117-43774136 None:intergenic 35.0%
AATATAAGTCTCACAAGTGC+TGG - chr2_3:43774149-43774168 Msa0293370:intron 35.0%
CTGGTGAGTGAAATTTGATT+TGG - chr2_3:43774168-43774187 Msa0293370:intron 35.0%
! GCTTATGTCATTGTCTCTTT+TGG - chr2_3:43774220-43774239 Msa0293370:intron 35.0%
!! CGCTTTTTAATTCTGCAAAG+GGG + chr2_3:43774329-43774348 None:intergenic 35.0%
!! GCGCTTTTTAATTCTGCAAA+GGG + chr2_3:43774330-43774349 None:intergenic 35.0%
CTTCGCATCTTACAATAACA+AGG + chr2_3:43774352-43774371 None:intergenic 35.0%
!! AAATGTCGCTTCCAAGTTTT+AGG - chr2_3:43774549-43774568 Msa0293370:intron 35.0%
TTCTTTCAAAATTGCAGTGG+TGG - chr2_3:43774646-43774665 Msa0293370:intron 35.0%
ACGCAATCCAAATTCATCAT+CGG + chr2_3:43774753-43774772 None:intergenic 35.0%
CATTAGATCAAGATCGAGTT+TGG + chr2_3:43774822-43774841 None:intergenic 35.0%
ACTGCATACATATTTGCAAC+CGG - chr2_3:43774899-43774918 Msa0293370:CDS 35.0%
CCTCCAAAACTTTCATATTG+CGG - chr2_3:43774958-43774977 Msa0293370:intron 35.0%
TTGCAATGTAACTGCAATTG+AGG - chr2_3:43775051-43775070 Msa0293370:intron 35.0%
!!! GGAGTTTTAAATAAGGGTCA+TGG + chr2_3:43775126-43775145 None:intergenic 35.0%
CTGTAGTCCAAACTATATTG+TGG + chr2_3:43775157-43775176 None:intergenic 35.0%
TATAGTTTGGACTACAGACT+CGG - chr2_3:43775160-43775179 Msa0293370:intron 35.0%
!! GAGCACTGATAAAGAACAAT+AGG + chr2_3:43775470-43775489 None:intergenic 35.0%
! CTACAGACTTTTATGGAACA+GGG + chr2_3:43775520-43775539 None:intergenic 35.0%
! ACTACAGACTTTTATGGAAC+AGG + chr2_3:43775521-43775540 None:intergenic 35.0%
! CCATACCCAGATGAAGATTT+TGG + chr2_3:43766573-43766592 None:intergenic 40.0%
CCAAAATCTTCATCTGGGTA+TGG - chr2_3:43766570-43766589 Msa0293370:CDS 40.0%
CTTCCTCTAAATATCCATGG+AGG + chr2_3:43766600-43766619 None:intergenic 40.0%
CTCCATGGATATTTAGAGGA+AGG - chr2_3:43766598-43766617 Msa0293370:intron 40.0%
!! CACAAGATGGAGTTGATACA+AGG + chr2_3:43766712-43766731 None:intergenic 40.0%
CTTTCTCTGCTTTCACAAGA+TGG + chr2_3:43766725-43766744 None:intergenic 40.0%
! TTGTGATTGCAGGACTTGTT+TGG - chr2_3:43767216-43767235 Msa0293370:intron 40.0%
TCCTTGTTAAACGGTACATC+CGG + chr2_3:43767456-43767475 None:intergenic 40.0%
GTAGGGTATAGGTATGAGTT+CGG + chr2_3:43767493-43767512 None:intergenic 40.0%
GATCTTTCTACATTCGGGTA+GGG + chr2_3:43767510-43767529 None:intergenic 40.0%
TGATCTTTCTACATTCGGGT+AGG + chr2_3:43767511-43767530 None:intergenic 40.0%
! AATTGATTCACTACAGGGAC+GGG - chr2_3:43767733-43767752 Msa0293370:CDS 40.0%
TCATCTCCGTATATGAGAGT+AGG - chr2_3:43767806-43767825 Msa0293370:CDS 40.0%
CATCTCCGTATATGAGAGTA+GGG - chr2_3:43767807-43767826 Msa0293370:CDS 40.0%
ATCTCCGTATATGAGAGTAG+GGG - chr2_3:43767808-43767827 Msa0293370:CDS 40.0%
TTTGATCTAGGCATGGCAAT+GGG + chr2_3:43767870-43767889 None:intergenic 40.0%
ATTTGATCTAGGCATGGCAA+TGG + chr2_3:43767871-43767890 None:intergenic 40.0%
TGCTAAATGGTGTCCAACAT+TGG - chr2_3:43767903-43767922 Msa0293370:intron 40.0%
TTGACTTCCCTAACTAGTAC+CGG - chr2_3:43768055-43768074 Msa0293370:intron 40.0%
TATCCACTATGTACACTTGG+TGG + chr2_3:43768326-43768345 None:intergenic 40.0%
!! GTGAAGCATTGGAACTTGAA+TGG + chr2_3:43768361-43768380 None:intergenic 40.0%
GATGAGCTCATTATGGATCT+AGG + chr2_3:43768766-43768785 None:intergenic 40.0%
AAAAACTCAACCAGGTGCAA+TGG + chr2_3:43768952-43768971 None:intergenic 40.0%
TTCCAAATTGTAGCTTCCAC+CGG + chr2_3:43769207-43769226 None:intergenic 40.0%
TTGTGAAAAGATGGGCAACA+AGG - chr2_3:43769296-43769315 Msa0293370:intron 40.0%
TGTGAAAAGATGGGCAACAA+GGG - chr2_3:43769297-43769316 Msa0293370:intron 40.0%
GGAAAATCTAGCTACTTGAC+TGG + chr2_3:43769591-43769610 None:intergenic 40.0%
!! TTAGAGGAGAGGGCTTTAAA+GGG + chr2_3:43770014-43770033 None:intergenic 40.0%
TCTCACTATCTTAGAGGAGA+GGG + chr2_3:43770024-43770043 None:intergenic 40.0%
ATAGTGAGAGTCGAGATCTT+AGG - chr2_3:43770035-43770054 Msa0293370:intron 40.0%
TCGAGATCTTAGGCAAGATT+AGG - chr2_3:43770045-43770064 Msa0293370:intron 40.0%
CGAGATCTTAGGCAAGATTA+GGG - chr2_3:43770046-43770065 Msa0293370:intron 40.0%
ATCCCTGAATTTGCACGAAT+CGG - chr2_3:43770250-43770269 Msa0293370:intron 40.0%
TGTGCATTTCGATGAATTGG+AGG + chr2_3:43770286-43770305 None:intergenic 40.0%
AATTAGTCCCTACGTCCATT+TGG - chr2_3:43770337-43770356 Msa0293370:intron 40.0%
ATTAGTCCCTACGTCCATTT+GGG - chr2_3:43770338-43770357 Msa0293370:intron 40.0%
CAATCCATCTGAGAGGTTAA+TGG + chr2_3:43770385-43770404 None:intergenic 40.0%
GACTTCTTAATGCCCATAGT+TGG + chr2_3:43770725-43770744 None:intergenic 40.0%
CCAAAAAGAAACCCAACTAG+GGG - chr2_3:43770781-43770800 Msa0293370:intron 40.0%
! ATCACTTCTTTGGAAATCCG+GGG - chr2_3:43770861-43770880 Msa0293370:intron 40.0%
GGGATAAACTCCATGAACTT+AGG - chr2_3:43770887-43770906 Msa0293370:intron 40.0%
!! GAACTTAGGTTGAGTTGAAC+CGG - chr2_3:43770901-43770920 Msa0293370:intron 40.0%
TATGGAACTCTAATAACGCC+AGG - chr2_3:43770941-43770960 Msa0293370:intron 40.0%
! CAAGGAGGTATGACATTAGA+GGG + chr2_3:43771036-43771055 None:intergenic 40.0%
GTTGCAAATGATGTAATGCC+TGG + chr2_3:43771187-43771206 None:intergenic 40.0%
GGAAATGATGTACCAGGAAA+TGG + chr2_3:43771370-43771389 None:intergenic 40.0%
ATCTTCATCAGCATCATCTC+TGG + chr2_3:43771614-43771633 None:intergenic 40.0%
GATGCTGATGAAGATGATGA+AGG - chr2_3:43771619-43771638 Msa0293370:intron 40.0%
GATGTTCTGACTGAAATGTG+AGG - chr2_3:43771677-43771696 Msa0293370:intron 40.0%
GTGTACAAGGACCAATTTGA+TGG + chr2_3:43771789-43771808 None:intergenic 40.0%
GTCTTGTACACGTGTTTACA+AGG + chr2_3:43771819-43771838 None:intergenic 40.0%
CGTGCATTTCGATGAATTGA+GGG - chr2_3:43771932-43771951 Msa0293370:intron 40.0%
GTCCTTGAATTTGCACGAAT+CGG + chr2_3:43771968-43771987 None:intergenic 40.0%
!!! TGCTATGGTTTTGGGGTTTA+AGG + chr2_3:43772080-43772099 None:intergenic 40.0%
!! TTGGGTTATGGTCTTATGGA+TGG + chr2_3:43772377-43772396 None:intergenic 40.0%
!! CCTTGGTTCTGATGATGATT+GGG + chr2_3:43772395-43772414 None:intergenic 40.0%
! GAAATGAAGTTTGATGGCCT+TGG + chr2_3:43772412-43772431 None:intergenic 40.0%
AGGCCATCAAACTTCATTTC+AGG - chr2_3:43772412-43772431 Msa0293370:intron 40.0%
AGTCAAGCTTAGTATGCGAA+TGG - chr2_3:43772661-43772680 Msa0293370:intron 40.0%
GTATGCGAATGGAAAACCTT+TGG - chr2_3:43772672-43772691 Msa0293370:intron 40.0%
CATATTGGTGGGATTCCATT+GGG + chr2_3:43772715-43772734 None:intergenic 40.0%
! ATGGAAAACATTTGGAGCTC+TGG + chr2_3:43772838-43772857 None:intergenic 40.0%
AGTCAAGCTTAGTATGCAGA+TGG + chr2_3:43772857-43772876 None:intergenic 40.0%
GGTGAAAATGTAGAAGATGG+TGG - chr2_3:43773158-43773177 Msa0293370:intron 40.0%
ATGTGTAGGCAGAGATGAAT+TGG - chr2_3:43773295-43773314 Msa0293370:intron 40.0%
GAGTAGGTCATAATCACTCA+AGG + chr2_3:43773359-43773378 None:intergenic 40.0%
CAAACACTTCATGTTGGAGT+AGG + chr2_3:43773375-43773394 None:intergenic 40.0%
! CTACTCCAACATGAAGTGTT+TGG - chr2_3:43773373-43773392 Msa0293370:intron 40.0%
! ATAGTCTGAGTTGAGATCCT+GGG + chr2_3:43773775-43773794 None:intergenic 40.0%
GATCTCAACTCAGACTATCT+TGG - chr2_3:43773777-43773796 Msa0293370:intron 40.0%
TAGTGTGAAAACCGAAACGA+AGG + chr2_3:43774277-43774296 None:intergenic 40.0%
!! GGCGCTTTTTAATTCTGCAA+AGG + chr2_3:43774331-43774350 None:intergenic 40.0%
!! GGAAGCGACATTTTAATCGT+TGG + chr2_3:43774542-43774561 None:intergenic 40.0%
!! CAAGAGTACTTAAGGAGGTT+AGG + chr2_3:43774685-43774704 None:intergenic 40.0%
!! CAATCTGGCAAGAGTACTTA+AGG + chr2_3:43774693-43774712 None:intergenic 40.0%
CTGTGAACCGATGATGAATT+TGG - chr2_3:43774743-43774762 Msa0293370:intron 40.0%
GCAAATATGTATGCAGTGCT+TGG + chr2_3:43774896-43774915 None:intergenic 40.0%
ATACATATTTGCAACCGGTG+CGG - chr2_3:43774904-43774923 Msa0293370:CDS 40.0%
!! CCGCAATATGAAAGTTTTGG+AGG + chr2_3:43774961-43774980 None:intergenic 40.0%
! TGGCCGCAATATGAAAGTTT+TGG + chr2_3:43774964-43774983 None:intergenic 40.0%
AAAACTTTCATATTGCGGCC+AGG - chr2_3:43774963-43774982 Msa0293370:intron 40.0%
AAGAGAATCGTGGTCAAATG+CGG + chr2_3:43775086-43775105 None:intergenic 40.0%
CGGTTTCGATAACATCACAT+AGG + chr2_3:43775402-43775421 None:intergenic 40.0%
GCGCCAAACGTCGTTATATA+TGG - chr2_3:43766086-43766105 Msa0293370:three_prime_UTR 45.0%
!!! ATCCACTGTGTCGTTTTGTG+TGG + chr2_3:43766126-43766145 None:intergenic 45.0%
AGTTATGAGGACAGTCCAGT+CGG - chr2_3:43766939-43766958 Msa0293370:intron 45.0%
!! TAGCAGCTTGTTGTGATTGC+AGG - chr2_3:43767206-43767225 Msa0293370:intron 45.0%
AGAACATACGCGCATGATGT+TGG + chr2_3:43767248-43767267 None:intergenic 45.0%
CCTTGTTAAACGGTACATCC+GGG + chr2_3:43767455-43767474 None:intergenic 45.0%
TATAGGTATGAGTTCGGCGT+GGG + chr2_3:43767487-43767506 None:intergenic 45.0%
TCTACATTCGGGTAGGGTAT+AGG + chr2_3:43767504-43767523 None:intergenic 45.0%
CCATCCCCTACTCTCATATA+CGG + chr2_3:43767815-43767834 None:intergenic 45.0%
CGTATATGAGAGTAGGGGAT+GGG - chr2_3:43767813-43767832 Msa0293370:CDS 45.0%
TTGATCTAGGCATGGCAATG+GGG + chr2_3:43767869-43767888 None:intergenic 45.0%
TGACTTCCCTAACTAGTACC+GGG - chr2_3:43768056-43768075 Msa0293370:intron 45.0%
GTTCCACCAAGTGTACATAG+TGG - chr2_3:43768320-43768339 Msa0293370:intron 45.0%
CTGTAGCACTAGTGAAGCAT+TGG + chr2_3:43768372-43768391 None:intergenic 45.0%
TTCCGGTGGAAGCTACAATT+TGG - chr2_3:43769202-43769221 Msa0293370:intron 45.0%
GGTGTACGTGAACAACAATG+AGG - chr2_3:43769318-43769337 Msa0293370:intron 45.0%
! AACAATGAGGCTTGCTCTCA+CGG - chr2_3:43769331-43769350 Msa0293370:intron 45.0%
GCGAGTATAGAGAAGAAGAG+CGG - chr2_3:43769691-43769710 Msa0293370:intron 45.0%
ATAGAGAAGAAGAGCGGAGA+TGG - chr2_3:43769697-43769716 Msa0293370:intron 45.0%
! TGAAAAAAGAGAGGAGCACG+TGG - chr2_3:43769724-43769743 Msa0293370:intron 45.0%
!! ATAGAGGATTTTGAGAGGGG+AGG - chr2_3:43769752-43769771 Msa0293370:intron 45.0%
!! TAGAGGATTTTGAGAGGGGA+GGG - chr2_3:43769753-43769772 Msa0293370:intron 45.0%
!! TTTTGAGAGGGGAGGGTTTT+AGG - chr2_3:43769760-43769779 Msa0293370:intron 45.0%
! TTTGAGAGGGGAGGGTTTTA+GGG - chr2_3:43769761-43769780 Msa0293370:intron 45.0%
! CTTAGAGGAGAGGGCTTTAA+AGG + chr2_3:43770015-43770034 None:intergenic 45.0%
CTCTCACTATCTTAGAGGAG+AGG + chr2_3:43770025-43770044 None:intergenic 45.0%
CTCGACTCTCACTATCTTAG+AGG + chr2_3:43770030-43770049 None:intergenic 45.0%
! GTCCGATTCGTGCAAATTCA+GGG + chr2_3:43771963-43771982 None:intergenic 45.0%
! TGTCCGATTCGTGCAAATTC+AGG + chr2_3:43771962-43771981 None:intergenic 45.0%
TTAGTCCCTACGTCCATTTG+GGG - chr2_3:43770339-43770358 Msa0293370:intron 45.0%
TGCTTACGTGACATCTGACA+TGG + chr2_3:43770408-43770427 None:intergenic 45.0%
AGGCAAAAGCAACCCAACTA+TGG - chr2_3:43770709-43770728 Msa0293370:intron 45.0%
GGCAAAAGCAACCCAACTAT+GGG - chr2_3:43770710-43770729 Msa0293370:intron 45.0%
! CCCCTAGTTGGGTTTCTTTT+TGG + chr2_3:43770784-43770803 None:intergenic 45.0%
! TCACTTCTTTGGAAATCCGG+GGG - chr2_3:43770862-43770881 Msa0293370:intron 45.0%
!! TTAGGTTGAGTTGAACCGGA+TGG - chr2_3:43770905-43770924 Msa0293370:intron 45.0%
GAACCGGATGGACCATAATT+TGG - chr2_3:43770917-43770936 Msa0293370:intron 45.0%
! GCAAGGAGGTATGACATTAG+AGG + chr2_3:43771037-43771056 None:intergenic 45.0%
CTAATGTCATACCTCCTTGC+AGG - chr2_3:43771037-43771056 Msa0293370:intron 45.0%
GGACATGTTGCAGAAAATGC+TGG + chr2_3:43771337-43771356 None:intergenic 45.0%
CCAGGAAATGGTGAAAATGC+TGG + chr2_3:43771358-43771377 None:intergenic 45.0%
! CCAGCATTTTCACCATTTCC+TGG - chr2_3:43771355-43771374 Msa0293370:intron 45.0%
!! TGATGAAGGTTTTAGCGGGA+AGG - chr2_3:43771633-43771652 Msa0293370:intron 45.0%
CAAATTGGTCCTTGTACACG+TGG - chr2_3:43771790-43771809 Msa0293370:intron 45.0%
TACAAGACAACAAGCCATGC+AGG - chr2_3:43771831-43771850 Msa0293370:intron 45.0%
!! GGACGGAAGGACTATTTTGA+TGG - chr2_3:43771884-43771903 Msa0293370:intron 45.0%
GCGTGCATTTCGATGAATTG+AGG - chr2_3:43771931-43771950 Msa0293370:intron 45.0%
! GTCCGATTCGTGCAAATTCA+AGG - chr2_3:43771963-43771982 Msa0293370:intron 45.0%
!! GTTTTCCAGTTCTAGTCTGG+TGG + chr2_3:43772140-43772159 None:intergenic 45.0%
GGAGAAGACAATGAAGATGG+AGG + chr2_3:43772260-43772279 None:intergenic 45.0%
CCCAATCATCATCAGAACCA+AGG - chr2_3:43772392-43772411 Msa0293370:intron 45.0%
!! GCCTTGGTTCTGATGATGAT+TGG + chr2_3:43772396-43772415 None:intergenic 45.0%
AAATTGGAGCGCATTCGAGA+TGG + chr2_3:43772619-43772638 None:intergenic 45.0%
TCCAATTTCGTTACACCCTG+AGG - chr2_3:43772631-43772650 Msa0293370:intron 45.0%
TCCTCAGGGTGTAACGAAAT+TGG + chr2_3:43772635-43772654 None:intergenic 45.0%
GCTTGACTTACAGTTCCTCA+GGG + chr2_3:43772649-43772668 None:intergenic 45.0%
AGCTTGACTTACAGTTCCTC+AGG + chr2_3:43772650-43772669 None:intergenic 45.0%
!! ATGGAAAACCTTTGGAGCTC+TGG - chr2_3:43772680-43772699 Msa0293370:intron 45.0%
TTGAGTATCCAGAGCTCCAA+AGG + chr2_3:43772827-43772846 None:intergenic 45.0%
CTCTGGATACTCAAACCCAA+TGG - chr2_3:43772697-43772716 Msa0293370:intron 45.0%
GCATATTGGTGGGATTCCAT+TGG + chr2_3:43772716-43772735 None:intergenic 45.0%
CTCTGGATACTCAAACCCAA+CGG + chr2_3:43772697-43772716 None:intergenic 45.0%
!! AGCTTGACTTGTAGTTCCTG+AGG - chr2_3:43772868-43772887 Msa0293370:intron 45.0%
!! GCTTGACTTGTAGTTCCTGA+GGG - chr2_3:43772869-43772888 Msa0293370:intron 45.0%
GGAGGTAGAGATGAATGTGT+AGG - chr2_3:43773281-43773300 Msa0293370:intron 45.0%
GTAGGCAGAGATGAATTGGA+AGG - chr2_3:43773299-43773318 Msa0293370:intron 45.0%
GTCACTAGATTGTGAATCGG+GGG + chr2_3:43773737-43773756 None:intergenic 45.0%
GGTCACTAGATTGTGAATCG+GGG + chr2_3:43773738-43773757 None:intergenic 45.0%
GGGTCACTAGATTGTGAATC+GGG + chr2_3:43773739-43773758 None:intergenic 45.0%
GGGGTCACTAGATTGTGAAT+CGG + chr2_3:43773740-43773759 None:intergenic 45.0%
! GATAGTCTGAGTTGAGATCC+TGG + chr2_3:43773776-43773795 None:intergenic 45.0%
GCAGTCTCAAGACAATCACA+AGG - chr2_3:43774014-43774033 Msa0293370:intron 45.0%
TCTCAAGACAATCACAAGGC+AGG - chr2_3:43774018-43774037 Msa0293370:intron 45.0%
ATCATTGGGATTGCGGAACT+CGG + chr2_3:43774075-43774094 None:intergenic 45.0%
! TTTGAGGTTTGACCGTTGGA+TGG - chr2_3:43774514-43774533 Msa0293370:intron 45.0%
TTGAGGTTTGACCGTTGGAT+GGG - chr2_3:43774515-43774534 Msa0293370:intron 45.0%
!! TCTGGCAAGAGTACTTAAGG+AGG + chr2_3:43774690-43774709 None:intergenic 45.0%
ACTCTTGCCAGATTGAATGC+AGG - chr2_3:43774698-43774717 Msa0293370:intron 45.0%
TGCCAGATTGAATGCAGGTT+TGG - chr2_3:43774703-43774722 Msa0293370:intron 45.0%
!!! CAAAAAAATTATTTTTTTTT+AGG + chr2_3:43768099-43768118 None:intergenic 5.0%
!!! CTAAAAAAAAATAATTTTTT+TGG - chr2_3:43768097-43768116 Msa0293370:intron 5.0%
!!! TATTTATTTATTTTTTAACA+AGG - chr2_3:43769615-43769634 Msa0293370:intron 5.0%
!!! ATTTATTTATTTTTTAACAA+GGG - chr2_3:43769616-43769635 Msa0293370:intron 5.0%
!!! AATCATAATATTTTTAAATT+TGG + chr2_3:43770110-43770129 None:intergenic 5.0%
!!! CAATATATAAATTTTAAATT+TGG - chr2_3:43773685-43773704 Msa0293370:intron 5.0%
!! TTATTTAACAAATTATTATA+GGG - chr2_3:43775241-43775260 Msa0293370:intron 5.0%
ATATAACGACGTTTGGCGCG+CGG + chr2_3:43766085-43766104 None:intergenic 50.0%
GTCCACACAAAACGACACAG+TGG - chr2_3:43766121-43766140 Msa0293370:three_prime_UTR 50.0%
CTGGGTATGGTAAACCTCCA+TGG - chr2_3:43766583-43766602 Msa0293370:intron 50.0%
CATACGCGCATGATGTTGGA+CGG + chr2_3:43767244-43767263 None:intergenic 50.0%
CCCGGATGTACCGTTTAACA+AGG - chr2_3:43767452-43767471 Msa0293370:intron 50.0%
GTATAGGTATGAGTTCGGCG+TGG + chr2_3:43767488-43767507 None:intergenic 50.0%
ATTCACTACAGGGACGGGAT+GGG - chr2_3:43767738-43767757 Msa0293370:CDS 50.0%
CGAGAATACCCGAACCCATT+TGG - chr2_3:43767761-43767780 Msa0293370:CDS 50.0%
ATACCCGAACCCATTTGGCA+CGG - chr2_3:43767766-43767785 Msa0293370:CDS 50.0%
ATCACATCCCCGTGCCAAAT+GGG + chr2_3:43767778-43767797 None:intergenic 50.0%
AATCACATCCCCGTGCCAAA+TGG + chr2_3:43767779-43767798 None:intergenic 50.0%
CCGTATATGAGAGTAGGGGA+TGG - chr2_3:43767812-43767831 Msa0293370:CDS 50.0%
TATGAGAGTAGGGGATGGGA+TGG - chr2_3:43767817-43767836 Msa0293370:CDS 50.0%
ATGAGAGTAGGGGATGGGAT+GGG - chr2_3:43767818-43767837 Msa0293370:CDS 50.0%
GACTTCCCTAACTAGTACCG+GGG - chr2_3:43768057-43768076 Msa0293370:intron 50.0%
GGTAATACTAACCAGTGCCC+CGG + chr2_3:43768077-43768096 None:intergenic 50.0%
TTGCTCTCACGGAAGAAAGG+TGG - chr2_3:43769342-43769361 Msa0293370:intron 50.0%
TGCTCTCACGGAAGAAAGGT+GGG - chr2_3:43769343-43769362 Msa0293370:intron 50.0%
GGAGCACGTGGAAGATATAG+AGG - chr2_3:43769736-43769755 Msa0293370:intron 50.0%
!! TTGAGAGGGGAGGGTTTTAG+GGG - chr2_3:43769762-43769781 Msa0293370:intron 50.0%
TAACGCCCCAAATGGACGTA+GGG + chr2_3:43770347-43770366 None:intergenic 50.0%
TTAACGCCCCAAATGGACGT+AGG + chr2_3:43770348-43770367 None:intergenic 50.0%
! ACGTCCATTTGGGGCGTTAA+CGG - chr2_3:43770348-43770367 Msa0293370:intron 50.0%
ATCACCGTTAACGCCCCAAA+TGG + chr2_3:43770355-43770374 None:intergenic 50.0%
GTGGCCATTAACCTCTCAGA+TGG - chr2_3:43770378-43770397 Msa0293370:intron 50.0%
GACATGGCAATCCATCTGAG+AGG + chr2_3:43770392-43770411 None:intergenic 50.0%
! TTCTTTGGAAATCCGGGGGT+TGG - chr2_3:43770866-43770885 Msa0293370:intron 50.0%
! TCTTTGGAAATCCGGGGGTT+GGG - chr2_3:43770867-43770886 Msa0293370:intron 50.0%
ATGGAGTTTATCCCAACCCC+CGG + chr2_3:43770881-43770900 None:intergenic 50.0%
CTAATAACGCCAGGAGCAGT+TGG - chr2_3:43770950-43770969 Msa0293370:intron 50.0%
CCTAAGCAAACACCAGTGAG+GGG + chr2_3:43770992-43771011 None:intergenic 50.0%
GCCTAAGCAAACACCAGTGA+GGG + chr2_3:43770993-43771012 None:intergenic 50.0%
!! GGTTTTAGCGGGAAGGAGAA+AGG - chr2_3:43771640-43771659 Msa0293370:intron 50.0%
ACAAGGAAGCCACGTGTACA+AGG + chr2_3:43771802-43771821 None:intergenic 50.0%
ACGCAACTCAGCAGCACTAA+CGG - chr2_3:43771854-43771873 Msa0293370:intron 50.0%
! AGCAGCACTAACGGAGCATT+TGG - chr2_3:43771863-43771882 Msa0293370:intron 50.0%
! GCACTAACGGAGCATTTGGA+CGG - chr2_3:43771867-43771886 Msa0293370:intron 50.0%
! TAACGGAGCATTTGGACGGA+AGG - chr2_3:43771871-43771890 Msa0293370:intron 50.0%
TCTAGTCTGGTGGCTGCATT+GGG + chr2_3:43772130-43772149 None:intergenic 50.0%
TTCTAGTCTGGTGGCTGCAT+TGG + chr2_3:43772131-43772150 None:intergenic 50.0%
ACCAATTGGTGGGATTCCGT+TGG - chr2_3:43772802-43772821 Msa0293370:intron 50.0%
CCAATTGGTGGGATTCCGTT+GGG - chr2_3:43772803-43772822 Msa0293370:intron 50.0%
GTACTCTCATTCACACCCTC+AGG + chr2_3:43772887-43772906 None:intergenic 50.0%
TGAATCGGGGGATCGTAACA+CGG + chr2_3:43773725-43773744 None:intergenic 50.0%
TTGAGATCCTGGGCAAGATC+GGG + chr2_3:43773765-43773784 None:intergenic 50.0%
GTTGAGATCCTGGGCAAGAT+CGG + chr2_3:43773766-43773785 None:intergenic 50.0%
AGACAATCACAAGGCAGGAG+TGG - chr2_3:43774023-43774042 Msa0293370:intron 50.0%
GGCACTGCTATCAACATGCT+TGG + chr2_3:43774491-43774510 None:intergenic 50.0%
TGATAGCAGTGCCTGCTTTG+AGG - chr2_3:43774498-43774517 Msa0293370:intron 50.0%
CAACGGTCAAACCTCAAAGC+AGG + chr2_3:43774512-43774531 None:intergenic 50.0%
!! CTGCTTTGAGGTTTGACCGT+TGG - chr2_3:43774510-43774529 Msa0293370:intron 50.0%
TGAGGTTTGACCGTTGGATG+GGG - chr2_3:43774516-43774535 Msa0293370:intron 50.0%
TAATCGTTGGCCCCATCCAA+CGG + chr2_3:43774529-43774548 None:intergenic 50.0%
GGCCAAACCTGCATTCAATC+TGG + chr2_3:43774708-43774727 None:intergenic 50.0%
AGTCAGCCTGTCAGCCATAT+CGG - chr2_3:43774785-43774804 Msa0293370:intron 50.0%
TGCAGTGCTTGGATTGTGTG+TGG + chr2_3:43774885-43774904 None:intergenic 50.0%
GAATGCAATTACAGCCGCAC+CGG + chr2_3:43774921-43774940 None:intergenic 50.0%
ACTCTGTTGTATCGCGGTAC+AGG + chr2_3:43775016-43775035 None:intergenic 50.0%
AACTGCAATTGAGGCCGCAT+TGG - chr2_3:43775060-43775079 Msa0293370:intron 50.0%
CTTGGCAGTGAAGAGAATCG+TGG + chr2_3:43775096-43775115 None:intergenic 50.0%
CACGATTCTCTTCACTGCCA+AGG - chr2_3:43775094-43775113 Msa0293370:CDS 50.0%
AAGGGTCATGGGATGATCCT+TGG + chr2_3:43775114-43775133 None:intergenic 50.0%
GGAACAGGGCTTACAGTAGT+AGG + chr2_3:43775506-43775525 None:intergenic 50.0%
! TCCAGTCGGTGCCTTTGATG+AGG - chr2_3:43766953-43766972 Msa0293370:intron 55.0%
!! ACCTCATCAAAGGCACCGAC+TGG + chr2_3:43766957-43766976 None:intergenic 55.0%
GATTCACTACAGGGACGGGA+TGG - chr2_3:43767737-43767756 Msa0293370:CDS 55.0%
TACCCGAACCCATTTGGCAC+GGG - chr2_3:43767767-43767786 Msa0293370:CDS 55.0%
! ATCCCCGTGCCAAATGGGTT+CGG + chr2_3:43767773-43767792 None:intergenic 55.0%
TGAGAGTAGGGGATGGGATG+GGG - chr2_3:43767819-43767838 Msa0293370:CDS 55.0%
CAGTGCCCCGGTACTAGTTA+GGG + chr2_3:43768065-43768084 None:intergenic 55.0%
TTCTACCTGGCCATTGCACC+TGG - chr2_3:43768939-43768958 Msa0293370:intron 55.0%
! GGCTTGCTCTCACGGAAGAA+AGG - chr2_3:43769339-43769358 Msa0293370:intron 55.0%
!!! TGAGAGGGGAGGGTTTTAGG+GGG - chr2_3:43769763-43769782 Msa0293370:intron 55.0%
!! AGGAGAGGGCTTTAAAGGGC+TGG + chr2_3:43770010-43770029 None:intergenic 55.0%
CTAGCACATCCAACTGCTCC+TGG + chr2_3:43770962-43770981 None:intergenic 55.0%
GCAGTTGGATGTGCTAGTGC+AGG - chr2_3:43770965-43770984 Msa0293370:intron 55.0%
CCCCTCACTGGTGTTTGCTT+AGG - chr2_3:43770989-43771008 Msa0293370:intron 55.0%
GGCCTAAGCAAACACCAGTG+AGG + chr2_3:43770994-43771013 None:intergenic 55.0%
! TGTTGCAGGGTGTTCCTGCA+AGG + chr2_3:43771054-43771073 None:intergenic 55.0%
CATCAGCATCATCTCTGGCG+AGG + chr2_3:43771609-43771628 None:intergenic 55.0%
TAGCGGGAAGGAGAAAGGTC+AGG - chr2_3:43771645-43771664 Msa0293370:intron 55.0%
AGCGGGAAGGAGAAAGGTCA+GGG - chr2_3:43771646-43771665 Msa0293370:intron 55.0%
TGCAGCCACCAGACTAGAAC+TGG - chr2_3:43772132-43772151 Msa0293370:intron 55.0%
CCCAACGGAATCCCACCAAT+TGG + chr2_3:43772806-43772825 None:intergenic 55.0%
TGAGATCCTGGGCAAGATCG+GGG + chr2_3:43773764-43773783 None:intergenic 55.0%
TGGTTCAGCTGCCACCGATA+TGG + chr2_3:43774802-43774821 None:intergenic 55.0%
GTGGTCAAATGCGGCCAATG+CGG + chr2_3:43775077-43775096 None:intergenic 55.0%
ACCCGAACCCATTTGGCACG+GGG - chr2_3:43767768-43767787 Msa0293370:CDS 60.0%
! TCCCCGTGCCAAATGGGTTC+GGG + chr2_3:43767772-43767791 None:intergenic 60.0%
CTAGGCATGGCAATGGGGCA+GGG + chr2_3:43767864-43767883 None:intergenic 60.0%
TCTAGGCATGGCAATGGGGC+AGG + chr2_3:43767865-43767884 None:intergenic 60.0%
CCAGTGCCCCGGTACTAGTT+AGG + chr2_3:43768066-43768085 None:intergenic 60.0%
! CCTAACTAGTACCGGGGCAC+TGG - chr2_3:43768063-43768082 Msa0293370:intron 60.0%
CTCAACCAGGTGCAATGGCC+AGG + chr2_3:43768947-43768966 None:intergenic 60.0%
! GGGCGTTAACGGTGATGACG+TGG - chr2_3:43770359-43770378 Msa0293370:intron 60.0%
! TGCAGGGTGTTCCTGCAAGG+AGG + chr2_3:43771051-43771070 None:intergenic 60.0%
CTGCTGAGTTGCGTCCTGCA+TGG + chr2_3:43771848-43771867 None:intergenic 60.0%
ATCCTGGGCAAGATCGGGGA+GGG + chr2_3:43773760-43773779 None:intergenic 60.0%
CAGCCTGTCAGCCATATCGG+TGG - chr2_3:43774788-43774807 Msa0293370:intron 60.0%
CTGCCACCGATATGGCTGAC+AGG + chr2_3:43774794-43774813 None:intergenic 60.0%
CAATGGGGCAGGGTGGGAAC+GGG + chr2_3:43767854-43767873 None:intergenic 65.0%
GCAATGGGGCAGGGTGGGAA+CGG + chr2_3:43767855-43767874 None:intergenic 65.0%
GCATGGCAATGGGGCAGGGT+GGG + chr2_3:43767860-43767879 None:intergenic 65.0%
GCTAGTGCAGGACCCCTCAC+TGG - chr2_3:43770977-43770996 Msa0293370:intron 65.0%
TCCTGGGCAAGATCGGGGAG+GGG + chr2_3:43773759-43773778 None:intergenic 65.0%
GATCCTGGGCAAGATCGGGG+AGG + chr2_3:43773761-43773780 None:intergenic 65.0%
GGCATGGCAATGGGGCAGGG+TGG + chr2_3:43767861-43767880 None:intergenic 70.0%
ACCCCTCCCCGATCTTGCCC+AGG - chr2_3:43773755-43773774 Msa0293370:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 43766082 43775780 43766082 ID=Msa0293370;Name=Msa0293370
chr2_3 mRNA 43766082 43775780 43766082 ID=Msa0293370-mRNA-1;Parent=Msa0293370;Name=Msa0293370-mRNA-1;_AED=0.40;_eAED=0.40;_QI=244|0.87|1|1|0.87|0.88|9|251|268
chr2_3 exon 43766082 43766600 43766082 ID=Msa0293370-mRNA-1:exon:13868;Parent=Msa0293370-mRNA-1
chr2_3 exon 43767143 43767199 43767143 ID=Msa0293370-mRNA-1:exon:13867;Parent=Msa0293370-mRNA-1
chr2_3 exon 43767292 43767355 43767292 ID=Msa0293370-mRNA-1:exon:13866;Parent=Msa0293370-mRNA-1
chr2_3 exon 43767692 43767857 43767692 ID=Msa0293370-mRNA-1:exon:13865;Parent=Msa0293370-mRNA-1
chr2_3 exon 43772249 43772287 43772249 ID=Msa0293370-mRNA-1:exon:13864;Parent=Msa0293370-mRNA-1
chr2_3 exon 43774888 43774951 43774888 ID=Msa0293370-mRNA-1:exon:13863;Parent=Msa0293370-mRNA-1
chr2_3 exon 43775072 43775155 43775072 ID=Msa0293370-mRNA-1:exon:13862;Parent=Msa0293370-mRNA-1
chr2_3 exon 43775243 43775310 43775243 ID=Msa0293370-mRNA-1:exon:13861;Parent=Msa0293370-mRNA-1
chr2_3 exon 43775540 43775780 43775540 ID=Msa0293370-mRNA-1:exon:13860;Parent=Msa0293370-mRNA-1
chr2_3 five_prime_UTR 43775540 43775780 43775540 ID=Msa0293370-mRNA-1:five_prime_utr;Parent=Msa0293370-mRNA-1
chr2_3 five_prime_UTR 43775308 43775310 43775308 ID=Msa0293370-mRNA-1:five_prime_utr;Parent=Msa0293370-mRNA-1
chr2_3 CDS 43775243 43775307 43775243 ID=Msa0293370-mRNA-1:cds;Parent=Msa0293370-mRNA-1
chr2_3 CDS 43775072 43775155 43775072 ID=Msa0293370-mRNA-1:cds;Parent=Msa0293370-mRNA-1
chr2_3 CDS 43774888 43774951 43774888 ID=Msa0293370-mRNA-1:cds;Parent=Msa0293370-mRNA-1
chr2_3 CDS 43772249 43772287 43772249 ID=Msa0293370-mRNA-1:cds;Parent=Msa0293370-mRNA-1
chr2_3 CDS 43767692 43767857 43767692 ID=Msa0293370-mRNA-1:cds;Parent=Msa0293370-mRNA-1
chr2_3 CDS 43767292 43767355 43767292 ID=Msa0293370-mRNA-1:cds;Parent=Msa0293370-mRNA-1
chr2_3 CDS 43767143 43767199 43767143 ID=Msa0293370-mRNA-1:cds;Parent=Msa0293370-mRNA-1
chr2_3 CDS 43766333 43766600 43766333 ID=Msa0293370-mRNA-1:cds;Parent=Msa0293370-mRNA-1
chr2_3 three_prime_UTR 43766082 43766332 43766082 ID=Msa0293370-mRNA-1:three_prime_utr;Parent=Msa0293370-mRNA-1
Gene Sequence

>Msa0293370

ATGGAAAGTGTAGAACCAAAATCTTCATCTGGGTATGGTAAACCTCCATGGATATTTAGAGGAAGTGCCTTGTATCAACTCCATCTTGTGAAAGCAGAGAAAGCAAGAGCATGTATTCCAAAAGAATTGAAATTGGTTGAAGCTTTTGGATACACTCTTGGTGGATTCTTTCTAGCTAGTTATGAGGACAGTCCAGTCGGTGCCTTTGATGAGGATGTGGGGCTTCCCAGTCAAGTAGCTAGATTTTCCAAGACTATTTCAGCAGTCTCAAGACAATCACAAGGCAGGAGTGGATTTTTAAATATGATTCAAATTGGTTCCGAGTTCCGCAATCCCAATGATCATCTAAATGTTCAAGTAACCGAAATCAAATCTCTCGATGCAGCAGATCCTTGTAATATAAGTCTCACAAGTGCTGTGCCTGCTTTGAGGTTTGACCGTTGGATGGGGCCAACGATTAAAATGTCGCTTCCAAGTTTTAGTGGTGGTACAGAGTTTAATCCTAACCTCCTTAAGTACTCTTGCCAGATTGAATGCAGGGTGCAAGCAGTGAAGCCTTTGAATGTTTCAAGATCATTCCCTTTAACAAATGTTGATGAAAAAGATCAACAAACTTTACAAGACTATGAAGGAAGTATCCATATGACTAAAGATCATGGAAAACAAAACTTAAGCACCTATGTGATGTTATCGAAACCGATATTAACACTCAAGTTTAATCAAATGAAGATGCAAGTCGAAGCTCCTATTGTTCTTTATCAGTGCTCAAATTCTTTAGAACCTACTACTGTAAGCCCTGTTCCATAA

Protein sequence

>Msa0293370

MESVEPKSSSGYGKPPWIFRGSALYQLHLVKAEKARACIPKELKLVEAFGYTLGGFFLASYEDSPVGAFDEDVGLPSQVARFSKTISAVSRQSQGRSGFLNMIQIGSEFRNPNDHLNVQVTEIKSLDAADPCNISLTSAVPALRFDRWMGPTIKMSLPSFSGGTEFNPNLLKYSCQIECRVQAVKPLNVSRSFPLTNVDEKDQQTLQDYEGSIHMTKDHGKQNLSTYVMLSKPILTLKFNQMKMQVEAPIVLYQCSNSLEPTTVSPVP*