Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254150 | XP_039686610.1 | 87.417 | 302 | 19 | 1 | 1 | 283 | 1 | 302 | 0.0 | 542 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254150 | sp|Q8GWB2|NDX1_ARATH | 52.778 | 288 | 107 | 6 | 1 | 268 | 1 | 279 | 2.92e-97 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254150 | A0A072VAS1 | 87.417 | 302 | 19 | 1 | 1 | 283 | 1 | 302 | 0.0 | 542 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0213750 | Msa0254150 | 0.868901 | 4.624606e-66 | -8.615850e-47 |
| Msa0254150 | Msa0293370 | 0.851523 | 8.397458e-61 | -8.615850e-47 |
| Msa0254150 | Msa0890250 | 0.807396 | 5.159531e-50 | -8.615850e-47 |
| Msa0254150 | Msa0910400 | 0.800351 | 1.501283e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254150 | MtrunA17_Chr2g0314411 | 85.714 | 308 | 19 | 2 | 1 | 283 | 1 | 308 | 0.0 | 536 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254150 | AT1G28100.1 | 52.778 | 288 | 107 | 6 | 1 | 268 | 1 | 279 | 2.97e-98 | 290 |
| Msa0254150 | AT1G28100.2 | 52.778 | 288 | 107 | 6 | 1 | 268 | 1 | 279 | 2.97e-98 | 290 |
| Msa0254150 | AT1G28100.6 | 52.778 | 288 | 107 | 6 | 1 | 268 | 1 | 279 | 2.97e-98 | 290 |
| Msa0254150 | AT1G28100.3 | 52.778 | 288 | 107 | 6 | 1 | 268 | 1 | 279 | 2.97e-98 | 290 |
| Msa0254150 | AT1G28100.4 | 51.351 | 296 | 107 | 7 | 1 | 268 | 1 | 287 | 2.89e-95 | 283 |
| Msa0254150 | AT1G28100.5 | 63.077 | 195 | 69 | 2 | 1 | 194 | 1 | 193 | 5.02e-86 | 256 |
Find 75 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATAATCTATATGAATTTA+AGG | 0.109240 | 2_2:+46851467 | None:intergenic |
| TTCAAATTGGTTGAAGCTTT+TGG | 0.161956 | 2_2:-46858873 | Msa0254150:CDS |
| TTCATATAGATTATGTTATT+TGG | 0.189674 | 2_2:-46851460 | Msa0254150:three_prime_UTR |
| TCAACCAATTTGAATTCTTT+TGG | 0.197334 | 2_2:+46858882 | None:intergenic |
| TTGTCATCAACATTTGTTAA+AGG | 0.212830 | 2_2:+46851835 | None:intergenic |
| GTAGAAGCAAAATCTTTATC+TGG | 0.275192 | 2_2:-46859072 | Msa0254150:CDS |
| CCTTAAAACTATAGACTTCA+TGG | 0.298934 | 2_2:+46851613 | None:intergenic |
| GCGCCAAACGTCGTTATATA+TGG | 0.320087 | 2_2:-46859554 | Msa0254150:five_prime_UTR |
| TTGTGATTGCTGGACTTGTT+TGG | 0.322195 | 2_2:-46858362 | Msa0254150:CDS |
| TATTCCAAAAGAATTCAAAT+TGG | 0.322226 | 2_2:-46858886 | Msa0254150:CDS |
| TAGCAGCTTGTTGTGATTGC+TGG | 0.332191 | 2_2:-46858372 | Msa0254150:intron |
| TGTCATCAACATTTGTTAAA+GGG | 0.337451 | 2_2:+46851836 | None:intergenic |
| TTGAACATTTAGATGATCAT+TGG | 0.349247 | 2_2:+46853054 | None:intergenic |
| AAGCCTCCATGGATATTTAA+AGG | 0.351433 | 2_2:-46859042 | Msa0254150:CDS |
| CTTTCTCTGCTTTCACAAGA+TGG | 0.361340 | 2_2:+46858919 | None:intergenic |
| ATGCTTTCAACAATTTCTTA+AGG | 0.378352 | 2_2:-46859339 | Msa0254150:intron |
| GAGCACTGATAAAGAACAAT+AGG | 0.395901 | 2_2:+46851670 | None:intergenic |
| TAACCATATATAACGACGTT+TGG | 0.415383 | 2_2:+46859551 | None:intergenic |
| TGATAGCAGTGCCTGCTTTG+AGG | 0.417708 | 2_2:-46852643 | Msa0254150:intron |
| AAACATACGCGCATGATGTT+GGG | 0.419386 | 2_2:+46858334 | None:intergenic |
| TGAACATTTAGATGATCATT+GGG | 0.419933 | 2_2:+46853055 | None:intergenic |
| TTAAACTTGAGTGTTAATAT+CGG | 0.424529 | 2_2:+46851718 | None:intergenic |
| AAAACATACGCGCATGATGT+TGG | 0.427645 | 2_2:+46858333 | None:intergenic |
| TACCTTCCTTTAAATATCCA+TGG | 0.438516 | 2_2:+46859036 | None:intergenic |
| TGCATCGAGAGATTTGATTT+CGG | 0.456818 | 2_2:+46853027 | None:intergenic |
| AACAATGAGGCTTGCTCTCA+CGG | 0.462678 | 2_2:-46856100 | Msa0254150:CDS |
| GAAAATCTAGCCACTTGACT+TGG | 0.464485 | 2_2:+46855824 | None:intergenic |
| ATTTACAGATATACTCTTGG+TGG | 0.472432 | 2_2:-46858759 | Msa0254150:intron |
| ACCTCATCAAAGGCACCGAC+TGG | 0.476368 | 2_2:+46858708 | None:intergenic |
| GGAACAGAGCTTACAGTAGT+AGG | 0.481905 | 2_2:+46851634 | None:intergenic |
| CACAAGATGGAGTTGATACA+AGG | 0.485373 | 2_2:+46858932 | None:intergenic |
| GAAATGATTTACCTAAAACT+TGG | 0.487429 | 2_2:+46852581 | None:intergenic |
| CTGCTTTGAGGTTTGACCGT+TGG | 0.488455 | 2_2:-46852631 | Msa0254150:CDS |
| CTGGGTATGGTAAGCCTCCA+TGG | 0.488508 | 2_2:-46859053 | Msa0254150:CDS |
| TTTGAGGTTTGACCGTTGGA+TGG | 0.490339 | 2_2:-46852627 | Msa0254150:CDS |
| TTGAGGTTTGACCGTTGGAT+GGG | 0.491225 | 2_2:-46852626 | Msa0254150:CDS |
| TTGATTTACAGATATACTCT+TGG | 0.492386 | 2_2:-46858762 | Msa0254150:intron |
| GCAAAATCTTTATCTGGGTA+TGG | 0.492394 | 2_2:-46859066 | Msa0254150:CDS |
| GCAAGCAGTGAAGCCTTTGA+AGG | 0.502040 | 2_2:-46851872 | Msa0254150:CDS |
| CTTGTGAGACTTATATTACA+AGG | 0.511170 | 2_2:+46852998 | None:intergenic |
| AATGATCTTGAAACCTTCAA+AGG | 0.511532 | 2_2:+46851859 | None:intergenic |
| ATCATTGGGATTGCGGAACT+CGG | 0.513694 | 2_2:+46853069 | None:intergenic |
| GGCTTGCTCTCACGGAAGAA+AGG | 0.518043 | 2_2:-46856092 | Msa0254150:intron |
| TTAAGAAATTGTTGAAAGCA+TGG | 0.518111 | 2_2:+46859341 | None:intergenic |
| TTTCATGATCTTCAGTCGCA+TGG | 0.520473 | 2_2:+46851776 | None:intergenic |
| AAGTAAAGTAGTGGAATATG+TGG | 0.521558 | 2_2:+46859467 | None:intergenic |
| CTCCATGGATATTTAAAGGA+AGG | 0.523528 | 2_2:-46859038 | Msa0254150:intron |
| TGAGGTTTGACCGTTGGATG+GGG | 0.524143 | 2_2:-46852625 | Msa0254150:CDS |
| TAGCATAAGAAGTAAAGTAG+TGG | 0.524756 | 2_2:+46859458 | None:intergenic |
| ATTCTTTCTAGCTAGTTATG+AGG | 0.526508 | 2_2:-46858736 | Msa0254150:CDS |
| AATATAAGTCTCACAAGTGC+TGG | 0.527940 | 2_2:-46852992 | Msa0254150:intron |
| TCTTCTCATTCTTTCAACAA+AGG | 0.528821 | 2_2:-46859424 | Msa0254150:five_prime_UTR |
| TTAGATGATCATTGGGATTG+CGG | 0.530128 | 2_2:+46853062 | None:intergenic |
| GTGGAATATGTGGAAATGAA+TGG | 0.531426 | 2_2:+46859477 | None:intergenic |
| TAGAAGCAAAATCTTTATCT+GGG | 0.536038 | 2_2:-46859071 | Msa0254150:CDS |
| AATTACATTCATAAGCAAGA+AGG | 0.538902 | 2_2:+46851550 | None:intergenic |
| GTTTAATCAAATGAAGATGC+AGG | 0.541807 | 2_2:-46851701 | Msa0254150:CDS |
| TCTCAAGACAATCAAGAGGC+AGG | 0.545611 | 2_2:-46853123 | Msa0254150:CDS |
| TCCAGTCGGTGCCTTTGATG+AGG | 0.565520 | 2_2:-46858709 | Msa0254150:intron |
| TAATCGTTGGCCCCATCCAA+CGG | 0.567276 | 2_2:+46852615 | None:intergenic |
| TGTGAAAAGATGGGCAACAA+AGG | 0.567868 | 2_2:-46856134 | Msa0254150:intron |
| GACAATCAAGAGGCAGGAGT+GGG | 0.577406 | 2_2:-46853117 | Msa0254150:CDS |
| CAACGGTCAAACCTCAAAGC+AGG | 0.590172 | 2_2:+46852632 | None:intergenic |
| AGACAATCAAGAGGCAGGAG+TGG | 0.591404 | 2_2:-46853118 | Msa0254150:CDS |
| CAATCTTTACAAGACTATGA+AGG | 0.592488 | 2_2:-46851805 | Msa0254150:CDS |
| CGGTTTCGATAACATCACAT+AGG | 0.621776 | 2_2:+46851738 | None:intergenic |
| TGTTGGGCTTCCAAGTCAAG+TGG | 0.652005 | 2_2:-46855834 | Msa0254150:CDS |
| GCTGTCTCAAGACAATCAAG+AGG | 0.656714 | 2_2:-46853127 | Msa0254150:CDS |
| CTTCCTTTAAATATCCATGG+AGG | 0.657381 | 2_2:+46859039 | None:intergenic |
| ATATAACGACGTTTGGCGCG+CGG | 0.663679 | 2_2:+46859558 | None:intergenic |
| AGTTATGAGGATAGTCCAGT+CGG | 0.673140 | 2_2:-46858723 | Msa0254150:CDS |
| CATACGCGCATGATGTTGGG+CGG | 0.696401 | 2_2:+46858337 | None:intergenic |
| TCTTTACAAGACTATGAAGG+CGG | 0.716049 | 2_2:-46851802 | Msa0254150:CDS |
| GGTGTACGTGAACAACAATG+AGG | 0.718209 | 2_2:-46856113 | Msa0254150:CDS |
| GTCCACACAAAACGACACAG+TGG | 0.745105 | 2_2:-46859519 | Msa0254150:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTATTATTTATA+AGG | + | chr2_2:46851756-46851775 | None:intergenic | 0.0% |
| !! | TTAAAATTAAAATATATTAA+TGG | - | chr2_2:46855455-46855474 | Msa0254150:intron | 0.0% |
| !! | GTTATATATTTAAATGTTTA+TGG | + | chr2_2:46851668-46851687 | None:intergenic | 10.0% |
| !! | TAAACTACTTAAAAAAAATT+AGG | + | chr2_2:46852284-46852303 | None:intergenic | 10.0% |
| !! | GAAGAAAAAAAAATTAAAAA+CGG | - | chr2_2:46852339-46852358 | Msa0254150:intron | 10.0% |
| !! | TAATTTATTTATGTTATGTA+TGG | - | chr2_2:46852517-46852536 | Msa0254150:intron | 10.0% |
| !!! | TGTTTGATAATAATTTTTTA+TGG | + | chr2_2:46853034-46853053 | None:intergenic | 10.0% |
| !!! | ATTCTTTAAAATAAATAAGT+AGG | - | chr2_2:46853561-46853580 | Msa0254150:intron | 10.0% |
| !!! | TTCTTTAAAATAAATAAGTA+GGG | - | chr2_2:46853562-46853581 | Msa0254150:intron | 10.0% |
| !! | ATAAATTCTTATATCAAATA+TGG | + | chr2_2:46854110-46854129 | None:intergenic | 10.0% |
| !! | TATAAGAATTTATAATAGTA+AGG | - | chr2_2:46854117-46854136 | Msa0254150:intron | 10.0% |
| !! | TTTACCTAAAAAAATAATTA+GGG | + | chr2_2:46854194-46854213 | None:intergenic | 10.0% |
| !!! | TTTTACCTAAAAAAATAATT+AGG | + | chr2_2:46854195-46854214 | None:intergenic | 10.0% |
| !! | TCTATCTATTATATATATAA+AGG | - | chr2_2:46854276-46854295 | Msa0254150:intron | 10.0% |
| !! | AATAAATATTTATATAGCAA+GGG | + | chr2_2:46854758-46854777 | None:intergenic | 10.0% |
| !! | AAATAAATATTTATATAGCA+AGG | + | chr2_2:46854759-46854778 | None:intergenic | 10.0% |
| !! | TTTAAAAAAATAAAATACCT+TGG | + | chr2_2:46855139-46855158 | None:intergenic | 10.0% |
| !!! | ATAATATTTTTAAATTTGGT+AGG | + | chr2_2:46855653-46855672 | None:intergenic | 10.0% |
| !!! | GATCATAATATTTTTAAATT+TGG | + | chr2_2:46855657-46855676 | None:intergenic | 10.0% |
| !! | CAATAAATTTATAGAAATTA+AGG | - | chr2_2:46856338-46856357 | Msa0254150:intron | 10.0% |
| !!! | ATATAAATTTTAAATTTGGT+AGG | - | chr2_2:46857486-46857505 | Msa0254150:intron | 10.0% |
| !!! | ATATATAAACCATTTTTATA+AGG | - | chr2_2:46857641-46857660 | Msa0254150:intron | 10.0% |
| !!! | ATTGAAAAAGTTTTAAATTA+TGG | + | chr2_2:46858993-46859012 | None:intergenic | 10.0% |
| !! | TTATTTGACATATTAAAATA+GGG | - | chr2_2:46859042-46859061 | Msa0254150:CDS | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855291-46855310 | Msa0254150:intron | 100.0% |
| !! | CAAATGCTATAAAAATAATA+TGG | + | chr2_2:46851705-46851724 | None:intergenic | 15.0% |
| !!! | TCATTTTATTTTATAGTTCA+TGG | - | chr2_2:46851838-46851857 | Msa0254150:CDS | 15.0% |
| !!! | TTTTTTATAATAATGACTAG+AGG | + | chr2_2:46852460-46852479 | None:intergenic | 15.0% |
| !! | TGAGATCAAATATAAAAATT+AGG | + | chr2_2:46852856-46852875 | None:intergenic | 15.0% |
| !!! | CATACAAAAATATTTTTTAG+TGG | - | chr2_2:46853002-46853021 | Msa0254150:CDS | 15.0% |
| !! | AATACATTAGTTAAAAAGTA+TGG | + | chr2_2:46853163-46853182 | None:intergenic | 15.0% |
| !! | TAGGTAATTAAAGATATTAA+CGG | - | chr2_2:46853267-46853286 | Msa0254150:intron | 15.0% |
| !!! | TCTTTAAAATAAATAAGTAG+GGG | - | chr2_2:46853563-46853582 | Msa0254150:intron | 15.0% |
| !! | GATAATGTATTATTATATGT+AGG | + | chr2_2:46853613-46853632 | None:intergenic | 15.0% |
| !! | TAATTCACAAAAAAGTTATA+TGG | + | chr2_2:46854608-46854627 | None:intergenic | 15.0% |
| !! | ATAAATATTTATATAGCAAG+GGG | + | chr2_2:46854757-46854776 | None:intergenic | 15.0% |
| !!! | ATTTATTTTTTGTGAAAAGA+TGG | - | chr2_2:46854794-46854813 | Msa0254150:intron | 15.0% |
| !!! | TTTATTTTTTGTGAAAAGAT+GGG | - | chr2_2:46854795-46854814 | Msa0254150:intron | 15.0% |
| !! | CAATAAATGAAAAGAAATTA+AGG | + | chr2_2:46856774-46856793 | None:intergenic | 15.0% |
| !!! | TTTTATTTTCTTTATGTCAT+AGG | - | chr2_2:46857269-46857288 | Msa0254150:intron | 15.0% |
| !!! | TAAGTAATTTAAGTGTTATT+TGG | - | chr2_2:46857404-46857423 | Msa0254150:intron | 15.0% |
| !!! | TGTTTTCATTTTTAATTAGA+TGG | + | chr2_2:46857606-46857625 | None:intergenic | 15.0% |
| !! | ATTAAAAATGAAAACAAACA+TGG | - | chr2_2:46857610-46857629 | Msa0254150:intron | 15.0% |
| !! | TTAAATCTATTCTATACAAT+AGG | - | chr2_2:46857750-46857769 | Msa0254150:intron | 15.0% |
| !!! | TTTTCAAATATGATTCAAAT+TGG | - | chr2_2:46857844-46857863 | Msa0254150:intron | 15.0% |
| !!! | GTAATCAGAATTTTAAATTA+CGG | + | chr2_2:46858938-46858957 | None:intergenic | 15.0% |
| !! | GTTATTTGACATATTAAAAT+AGG | - | chr2_2:46859041-46859060 | Msa0254150:CDS | 15.0% |
| !! | ACATAATCTATATGAATTTA+AGG | + | chr2_2:46859474-46859493 | None:intergenic | 15.0% |
| !! | TTCATATAGATTATGTTATT+TGG | - | chr2_2:46859478-46859497 | Msa0254150:five_prime_UTR | 15.0% |
| !!! | AAACTTATTTTCTAAATGTA+GGG | + | chr2_2:46859505-46859524 | None:intergenic | 15.0% |
| !!! | TAAACTTATTTTCTAAATGT+AGG | + | chr2_2:46859506-46859525 | None:intergenic | 15.0% |
| !! | ATGAAATTGATGTGAAAAAT+GGG | + | chr2_2:46851568-46851587 | None:intergenic | 20.0% |
| !! | AATGAAATTGATGTGAAAAA+TGG | + | chr2_2:46851569-46851588 | None:intergenic | 20.0% |
| !! | AACAATTTCTTAAGGTAAAT+TGG | - | chr2_2:46851607-46851626 | Msa0254150:three_prime_UTR | 20.0% |
| !!! | TTTATTTTATAGTTCATGGA+AGG | - | chr2_2:46851842-46851861 | Msa0254150:CDS | 20.0% |
| !! | TATTCCAAAAGAATTCAAAT+TGG | - | chr2_2:46852052-46852071 | Msa0254150:intron | 20.0% |
| !!! | ATTCGATTCAAATTTTCAAA+CGG | - | chr2_2:46852369-46852388 | Msa0254150:intron | 20.0% |
| !! | ACATTATTAGAAATTTGTGT+GGG | - | chr2_2:46852543-46852562 | Msa0254150:intron | 20.0% |
| !!! | ATTGGACATGTATTTTAAAA+CGG | + | chr2_2:46853104-46853123 | None:intergenic | 20.0% |
| !!! | ACATAAGAAATTAGAAGTAT+TGG | + | chr2_2:46853393-46853412 | None:intergenic | 20.0% |
| !! | AATGTATTATTATATGTAGG+AGG | + | chr2_2:46853610-46853629 | None:intergenic | 20.0% |
| !!! | ATTTTGATTGGAAAACTAAT+AGG | + | chr2_2:46853685-46853704 | None:intergenic | 20.0% |
| !!! | TTTTCCAATCAAAATTGATT+TGG | - | chr2_2:46853690-46853709 | Msa0254150:intron | 20.0% |
| !!! | AGATCCCTAATTATTTTTTT+AGG | - | chr2_2:46854187-46854206 | Msa0254150:intron | 20.0% |
| !! | TATAATAGATAGATTAATCG+TGG | + | chr2_2:46854269-46854288 | None:intergenic | 20.0% |
| !! | TAAAGGAAAAATACAAAAGA+TGG | - | chr2_2:46854293-46854312 | Msa0254150:intron | 20.0% |
| !! | AAAGGAAAAATACAAAAGAT+GGG | - | chr2_2:46854294-46854313 | Msa0254150:intron | 20.0% |
| !! | AAAAATTGATGTACTCATTA+TGG | + | chr2_2:46854338-46854357 | None:intergenic | 20.0% |
| !! | GACAATATTGTATTAAAAGT+TGG | + | chr2_2:46854408-46854427 | None:intergenic | 20.0% |
| !! | TTTATTTATCATATTTCCAG+TGG | - | chr2_2:46854698-46854717 | Msa0254150:intron | 20.0% |
| !! | AAAAATTTGACAATTGACAA+TGG | + | chr2_2:46854907-46854926 | None:intergenic | 20.0% |
| !!! | TGTCAATTGTCAAATTTTTT+TGG | - | chr2_2:46854908-46854927 | Msa0254150:intron | 20.0% |
| !! | TTAAACTTTATATTCTCCTT+TGG | + | chr2_2:46854951-46854970 | None:intergenic | 20.0% |
| !!! | CAAATATTTGGTTTCAAATA+TGG | + | chr2_2:46855049-46855068 | None:intergenic | 20.0% |
| !!! | TTATTGCATTTAATCTTTTG+AGG | - | chr2_2:46855164-46855183 | Msa0254150:intron | 20.0% |
| !! | GTAATATGAAGAAAAATGAA+CGG | + | chr2_2:46855334-46855353 | None:intergenic | 20.0% |
| !! | TAACACTTGAAAATATACAT+CGG | + | chr2_2:46856535-46856554 | None:intergenic | 20.0% |
| !!! | TATTTTCAAGTGTTAGATTT+TGG | - | chr2_2:46856540-46856559 | Msa0254150:intron | 20.0% |
| !!! | TAAGTTTTCATGTTTTGTTA+TGG | - | chr2_2:46857211-46857230 | Msa0254150:intron | 20.0% |
| !! | CTTAACAAAAACTGAAATTT+AGG | + | chr2_2:46857388-46857407 | None:intergenic | 20.0% |
| !!! | TTAAGTGTTATTTGGAATTA+TGG | - | chr2_2:46857412-46857431 | Msa0254150:intron | 20.0% |
| !! | AGAATAGATTTAAGAGAATT+TGG | + | chr2_2:46857743-46857762 | None:intergenic | 20.0% |
| !! | CAAATTGATAAAAATGTTGT+AGG | - | chr2_2:46858174-46858193 | Msa0254150:intron | 20.0% |
| !! | TATGTCAATTACATTTAGAA+GGG | + | chr2_2:46858251-46858270 | None:intergenic | 20.0% |
| !! | TTATGTCAATTACATTTAGA+AGG | + | chr2_2:46858252-46858271 | None:intergenic | 20.0% |
| !! | TTCTAAATGTAATTGACATA+AGG | - | chr2_2:46858251-46858270 | Msa0254150:intron | 20.0% |
| !! | AATTTGTAGTCAAAACTATA+TGG | + | chr2_2:46858966-46858985 | None:intergenic | 20.0% |
| !!! | TATAGTTTTGACTACAAATT+CGG | - | chr2_2:46858966-46858985 | Msa0254150:intron | 20.0% |
| !! | TTAAACTTGAGTGTTAATAT+CGG | + | chr2_2:46859223-46859242 | None:intergenic | 20.0% |
| !! | TGAAAAATGGGATTTCTTTT+AGG | + | chr2_2:46851556-46851575 | None:intergenic | 25.0% |
| ! | TTAAGAAATTGTTGAAAGCA+TGG | + | chr2_2:46851600-46851619 | None:intergenic | 25.0% |
| ! | ATGCTTTCAACAATTTCTTA+AGG | - | chr2_2:46851599-46851618 | Msa0254150:three_prime_UTR | 25.0% |
| ! | TGTTACTAACTTAATGTTAC+TGG | + | chr2_2:46851785-46851804 | None:intergenic | 25.0% |
| ! | TAGAAGCAAAATCTTTATCT+GGG | - | chr2_2:46851867-46851886 | Msa0254150:CDS | 25.0% |
| !! | TCAACCAATTTGAATTCTTT+TGG | + | chr2_2:46852059-46852078 | None:intergenic | 25.0% |
| ! | TTGATTTACAGATATACTCT+TGG | - | chr2_2:46852176-46852195 | Msa0254150:intron | 25.0% |
| ! | AACAAATATTATTCTTCCTC+TGG | - | chr2_2:46852303-46852322 | Msa0254150:intron | 25.0% |
| ! | GACATTATTAGAAATTTGTG+TGG | - | chr2_2:46852542-46852561 | Msa0254150:intron | 25.0% |
| ! | TTAAAAAAGATGGAGAAGAA+TGG | - | chr2_2:46852692-46852711 | Msa0254150:intron | 25.0% |
| ! | TAAAAAAGATGGAGAAGAAT+GGG | - | chr2_2:46852693-46852712 | Msa0254150:intron | 25.0% |
| !!! | ATGCATTTTTTCAATGACAT+GGG | + | chr2_2:46852753-46852772 | None:intergenic | 25.0% |
| !!! | AATGCATTTTTTCAATGACA+TGG | + | chr2_2:46852754-46852773 | None:intergenic | 25.0% |
| ! | TTCTTATGTCTTAGTTCAAA+CGG | - | chr2_2:46853404-46853423 | Msa0254150:intron | 25.0% |
| !! | TAGATAGTTCTATCTTTCAA+TGG | + | chr2_2:46853460-46853479 | None:intergenic | 25.0% |
| !!! | CAATCCAAATCAATTTTGAT+TGG | + | chr2_2:46853697-46853716 | None:intergenic | 25.0% |
| !!! | ATTGATTTGGATTGATCAAT+AGG | - | chr2_2:46853703-46853722 | Msa0254150:intron | 25.0% |
| ! | CAACAATGCAAAAAATTGAT+TGG | + | chr2_2:46853833-46853852 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTGCATTGTTGA+TGG | - | chr2_2:46853834-46853853 | Msa0254150:intron | 25.0% |
| !!! | CAATTTTTTGCATTGTTGAT+GGG | - | chr2_2:46853835-46853854 | Msa0254150:intron | 25.0% |
| !!! | CATCCTCTTTTTTTATTTGA+GGG | - | chr2_2:46853873-46853892 | Msa0254150:intron | 25.0% |
| !!! | ATCCTCTTTTTTTATTTGAG+GGG | - | chr2_2:46853874-46853893 | Msa0254150:intron | 25.0% |
| !!! | CAGCAAAGTATTGATAATTA+AGG | - | chr2_2:46854048-46854067 | Msa0254150:intron | 25.0% |
| ! | AAGGAAAAATACAAAAGATG+GGG | - | chr2_2:46854295-46854314 | Msa0254150:intron | 25.0% |
| ! | AACCTTAACAAAATTAAACC+AGG | + | chr2_2:46854466-46854485 | None:intergenic | 25.0% |
| ! | GTAACATTGTAAAATCATAG+TGG | - | chr2_2:46854523-46854542 | Msa0254150:intron | 25.0% |
| ! | CCATTAGCTAAAAAAGTTTA+TGG | + | chr2_2:46854549-46854568 | None:intergenic | 25.0% |
| !!! | CCATAAACTTTTTTAGCTAA+TGG | - | chr2_2:46854546-46854565 | Msa0254150:intron | 25.0% |
| ! | TTCACAAAAAAGTTATATGG+TGG | + | chr2_2:46854605-46854624 | None:intergenic | 25.0% |
| ! | TGAATTCTACAATAAACCAA+AGG | - | chr2_2:46854932-46854951 | Msa0254150:intron | 25.0% |
| !!! | AGGTTGATAAGTTTTTCATA+AGG | - | chr2_2:46855184-46855203 | Msa0254150:intron | 25.0% |
| ! | TTACAAAATACCCTTTATTC+AGG | - | chr2_2:46855350-46855369 | Msa0254150:intron | 25.0% |
| ! | TACAAAATACCCTTTATTCA+GGG | - | chr2_2:46855351-46855370 | Msa0254150:intron | 25.0% |
| !! | ACTCTTTTACATTGTTTGAA+AGG | + | chr2_2:46855513-46855532 | None:intergenic | 25.0% |
| ! | TTGATTCATATGCATATGTT+CGG | + | chr2_2:46855686-46855705 | None:intergenic | 25.0% |
| ! | AGAAGGTCATAATCAATTAA+GGG | - | chr2_2:46855988-46856007 | Msa0254150:intron | 25.0% |
| ! | GAATCAACATTAAATTGAAG+AGG | + | chr2_2:46856103-46856122 | None:intergenic | 25.0% |
| ! | TCAATGTTCATACATAAAGA+AGG | + | chr2_2:46856317-46856336 | None:intergenic | 25.0% |
| !!! | TAGATTTTCAAGTGTTAGAT+TGG | + | chr2_2:46856577-46856596 | None:intergenic | 25.0% |
| ! | GAAAAATATAACGTCATTCA+TGG | + | chr2_2:46856840-46856859 | None:intergenic | 25.0% |
| !! | GAATGACGTTATATTTTTCA+TGG | - | chr2_2:46856841-46856860 | Msa0254150:intron | 25.0% |
| ! | GAATCAATATCAAATTGAAG+AGG | - | chr2_2:46857010-46857029 | Msa0254150:intron | 25.0% |
| ! | TTCTCAATTATGAACAAGAA+TGG | + | chr2_2:46857045-46857064 | None:intergenic | 25.0% |
| ! | AATTGAGAAGATGAACATTA+TGG | - | chr2_2:46857056-46857075 | Msa0254150:intron | 25.0% |
| ! | AGGTGAAGAAGATAATAAAA+TGG | - | chr2_2:46857115-46857134 | Msa0254150:intron | 25.0% |
| ! | TGAAGAAGATAATAAAATGG+AGG | - | chr2_2:46857118-46857137 | Msa0254150:intron | 25.0% |
| ! | TTCAGAAGACCTTATAAAAA+TGG | + | chr2_2:46857653-46857672 | None:intergenic | 25.0% |
| ! | TGAACATTTAGATGATCATT+GGG | + | chr2_2:46857886-46857905 | None:intergenic | 25.0% |
| ! | TTGAACATTTAGATGATCAT+TGG | + | chr2_2:46857887-46857906 | None:intergenic | 25.0% |
| !! | CTTATTTCATACCTTTGTTT+CGG | - | chr2_2:46858060-46858079 | Msa0254150:intron | 25.0% |
| ! | GAAATGATTTACCTAAAACT+TGG | + | chr2_2:46858360-46858379 | None:intergenic | 25.0% |
| ! | TCGGATGATAAAAAAAATCT+CGG | - | chr2_2:46858627-46858646 | Msa0254150:intron | 25.0% |
| !! | TGTCATCAACATTTGTTAAA+GGG | + | chr2_2:46859105-46859124 | None:intergenic | 25.0% |
| !! | TTGTCATCAACATTTGTTAA+AGG | + | chr2_2:46859106-46859125 | None:intergenic | 25.0% |
| ! | AATTACATTCATAAGCAAGA+AGG | + | chr2_2:46859391-46859410 | None:intergenic | 25.0% |
| TAACCATATATAACGACGTT+TGG | + | chr2_2:46851390-46851409 | None:intergenic | 30.0% | |
| ! | AAGTAAAGTAGTGGAATATG+TGG | + | chr2_2:46851474-46851493 | None:intergenic | 30.0% |
| TAGCATAAGAAGTAAAGTAG+TGG | + | chr2_2:46851483-46851502 | None:intergenic | 30.0% | |
| TCTTCTCATTCTTTCAACAA+AGG | - | chr2_2:46851514-46851533 | Msa0254150:three_prime_UTR | 30.0% | |
| AAATGGGTAGTTAGAGTTAA+TGG | + | chr2_2:46851637-46851656 | None:intergenic | 30.0% | |
| GTTTATGGAAGAAGCAAAAT+GGG | + | chr2_2:46851653-46851672 | None:intergenic | 30.0% | |
| TGTTTATGGAAGAAGCAAAA+TGG | + | chr2_2:46851654-46851673 | None:intergenic | 30.0% | |
| GCATTTGATTCCATAAAATG+TGG | - | chr2_2:46851718-46851737 | Msa0254150:CDS | 30.0% | |
| ! | GATAAACTAGCCACATTTTA+TGG | + | chr2_2:46851731-46851750 | None:intergenic | 30.0% |
| GTAGAAGCAAAATCTTTATC+TGG | - | chr2_2:46851866-46851885 | Msa0254150:CDS | 30.0% | |
| TACCTTCCTTTAAATATCCA+TGG | + | chr2_2:46851905-46851924 | None:intergenic | 30.0% | |
| ! | TTCAAATTGGTTGAAGCTTT+TGG | - | chr2_2:46852065-46852084 | Msa0254150:intron | 30.0% |
| ! | TCAAATTGGTTGAAGCTTTT+GGG | - | chr2_2:46852066-46852085 | Msa0254150:intron | 30.0% |
| ATTTACAGATATACTCTTGG+TGG | - | chr2_2:46852179-46852198 | Msa0254150:intron | 30.0% | |
| !! | ATTCTTTCTAGCTAGTTATG+AGG | - | chr2_2:46852202-46852221 | Msa0254150:intron | 30.0% |
| !! | TTCCTCTGGTCTTAAATATA+AGG | - | chr2_2:46852317-46852336 | Msa0254150:intron | 30.0% |
| ! | TTCCTTATATTTAAGACCAG+AGG | + | chr2_2:46852322-46852341 | None:intergenic | 30.0% |
| !!! | GACATGTATTTTAAAACGGA+GGG | + | chr2_2:46853100-46853119 | None:intergenic | 30.0% |
| ATAGTGCACATTGCAAAAAT+TGG | + | chr2_2:46853122-46853141 | None:intergenic | 30.0% | |
| !! | CTTGGACATGTATTTTGAAA+CGG | - | chr2_2:46853325-46853344 | Msa0254150:intron | 30.0% |
| !!! | TAGTTTTTTCTCCTTTGCAT+AGG | - | chr2_2:46853362-46853381 | Msa0254150:intron | 30.0% |
| TGAAACATTGGAACTTGAAT+GGG | + | chr2_2:46853770-46853789 | None:intergenic | 30.0% | |
| !!! | GCATCCTCTTTTTTTATTTG+AGG | - | chr2_2:46853872-46853891 | Msa0254150:intron | 30.0% |
| !!! | TCCTCTTTTTTTATTTGAGG+GGG | - | chr2_2:46853875-46853894 | Msa0254150:intron | 30.0% |
| TATATCAAATATGGTGTCTC+TGG | + | chr2_2:46854101-46854120 | None:intergenic | 30.0% | |
| ACTCATTATGGATATAGGTA+AGG | + | chr2_2:46854326-46854345 | None:intergenic | 30.0% | |
| GATGTACTCATTATGGATAT+AGG | + | chr2_2:46854331-46854350 | None:intergenic | 30.0% | |
| ! | GTCGTATATAATTTTGTCCA+CGG | - | chr2_2:46854368-46854387 | Msa0254150:intron | 30.0% |
| ! | TCGTATATAATTTTGTCCAC+GGG | - | chr2_2:46854369-46854388 | Msa0254150:intron | 30.0% |
| !!! | TGGATTATTTTTTTTTCCCG+TGG | + | chr2_2:46854388-46854407 | None:intergenic | 30.0% |
| !! | TCAGATACATTGATTCTACT+TGG | - | chr2_2:46854432-46854451 | Msa0254150:intron | 30.0% |
| !! | AGAAAAGTGCTTAAATCTAC+TGG | + | chr2_2:46854492-46854511 | None:intergenic | 30.0% |
| GGTGAGAGAAAAATAATTTG+TGG | - | chr2_2:46854867-46854886 | Msa0254150:intron | 30.0% | |
| ACAATTGACAATGGTTGTTT+GGG | + | chr2_2:46854898-46854917 | None:intergenic | 30.0% | |
| AAATATATGCCAATCACATG+TGG | + | chr2_2:46855006-46855025 | None:intergenic | 30.0% | |
| TTGAAACCAAATATTTGTGC+TGG | - | chr2_2:46855052-46855071 | Msa0254150:intron | 30.0% | |
| TGAAACCAAATATTTGTGCT+GGG | - | chr2_2:46855053-46855072 | Msa0254150:intron | 30.0% | |
| !!! | GTAACTAGCATTTTTTCTAC+AGG | - | chr2_2:46855080-46855099 | Msa0254150:intron | 30.0% |
| !!! | CATTTTTTCTACAGGATGTT+GGG | - | chr2_2:46855088-46855107 | Msa0254150:intron | 30.0% |
| ! | AGGAGATGACTTTAGAAAAA+AGG | - | chr2_2:46855235-46855254 | Msa0254150:intron | 30.0% |
| ! | AAAAGGAAAGAGTACATAGA+AGG | - | chr2_2:46855252-46855271 | Msa0254150:intron | 30.0% |
| ACAAAATACCCTTTATTCAG+GGG | - | chr2_2:46855352-46855371 | Msa0254150:intron | 30.0% | |
| GGGGAACTCAAAAATTAAAT+TGG | - | chr2_2:46855371-46855390 | Msa0254150:intron | 30.0% | |
| CTCAAAAATTAAATTGGTCG+AGG | - | chr2_2:46855377-46855396 | Msa0254150:intron | 30.0% | |
| !!! | TTTTTAGGTGTGATATGCAA+CGG | + | chr2_2:46855819-46855838 | None:intergenic | 30.0% |
| ! | TTGGGGTTTAAGGAATTTTT+AGG | + | chr2_2:46855834-46855853 | None:intergenic | 30.0% |
| !!! | TGTCATTTGCTATTGTTTTG+GGG | + | chr2_2:46855851-46855870 | None:intergenic | 30.0% |
| !!! | GTGTCATTTGCTATTGTTTT+GGG | + | chr2_2:46855852-46855871 | None:intergenic | 30.0% |
| !!! | AGTGTCATTTGCTATTGTTT+TGG | + | chr2_2:46855853-46855872 | None:intergenic | 30.0% |
| AATTCCCAAACAATTCATGT+TGG | - | chr2_2:46855965-46855984 | Msa0254150:intron | 30.0% | |
| TTCTCCAACATGAATTGTTT+GGG | + | chr2_2:46855972-46855991 | None:intergenic | 30.0% | |
| GAGAAGGTCATAATCAATTA+AGG | - | chr2_2:46855987-46856006 | Msa0254150:intron | 30.0% | |
| ACATTAAATTGAAGAGGATG+AGG | + | chr2_2:46856097-46856116 | None:intergenic | 30.0% | |
| ! | GAAATGAAGTTTGATGACTT+TGG | + | chr2_2:46856204-46856223 | None:intergenic | 30.0% |
| AAGTCATCAAACTTCATTTC+AGG | - | chr2_2:46856204-46856223 | Msa0254150:intron | 30.0% | |
| !! | TCTTCTCCCTTTTTATTTCT+TGG | - | chr2_2:46856230-46856249 | Msa0254150:intron | 30.0% |
| ! | GATTGGCCAAGAAATAAAAA+GGG | + | chr2_2:46856239-46856258 | None:intergenic | 30.0% |
| ! | AGATTGGCCAAGAAATAAAA+AGG | + | chr2_2:46856240-46856259 | None:intergenic | 30.0% |
| TGTTATGGCTAATTCAAGAT+TGG | + | chr2_2:46856256-46856275 | None:intergenic | 30.0% | |
| ! | GAATGACGTTGTATTTGTTA+TGG | + | chr2_2:46856271-46856290 | None:intergenic | 30.0% |
| GAAAATATACATCGGCATAT+TGG | + | chr2_2:46856527-46856546 | None:intergenic | 30.0% | |
| ACTTGAAAATCTACACCAAT+TGG | - | chr2_2:46856584-46856603 | Msa0254150:intron | 30.0% | |
| TCCTAGTTCATACAAAAAGA+AGG | - | chr2_2:46856795-46856814 | Msa0254150:intron | 30.0% | |
| ! | TCCTTCTTTTTGTATGAACT+AGG | + | chr2_2:46856799-46856818 | None:intergenic | 30.0% |
| !!! | TCATGGTTTTTTGCTTCAAA+CGG | + | chr2_2:46856823-46856842 | None:intergenic | 30.0% |
| TTTCATGGCTAATTCAAGAT+TGG | - | chr2_2:46856856-46856875 | Msa0254150:intron | 30.0% | |
| !!! | CATTGGTTTTGATGATGATT+GGG | - | chr2_2:46856926-46856945 | Msa0254150:intron | 30.0% |
| !!! | TTTTGATGATGATTGGGTTA+TGG | - | chr2_2:46856932-46856951 | Msa0254150:intron | 30.0% |
| !! | TTTGATGATGATTGGGTTAT+GGG | - | chr2_2:46856933-46856952 | Msa0254150:intron | 30.0% |
| ATATCAAATTGAAGAGGATG+AGG | - | chr2_2:46857016-46857035 | Msa0254150:intron | 30.0% | |
| ! | ACGTCTCTTAAGATGTTTTT+AGG | - | chr2_2:46857311-46857330 | Msa0254150:intron | 30.0% |
| ! | TTCTTGTCTTATAAGGTGTT+TGG | + | chr2_2:46857715-46857734 | None:intergenic | 30.0% |
| ! | GGACATTTTCTTGTCTTATA+AGG | + | chr2_2:46857722-46857741 | None:intergenic | 30.0% |
| CTTGTGAGACTTATATTACA+AGG | + | chr2_2:46857943-46857962 | None:intergenic | 30.0% | |
| GATGATACATCATACATCTT+TGG | - | chr2_2:46857987-46858006 | Msa0254150:intron | 30.0% | |
| !! | CTCTTTTTAATTCTGCAAAG+GGG | + | chr2_2:46858126-46858145 | None:intergenic | 30.0% |
| !! | GCTCTTTTTAATTCTGCAAA+GGG | + | chr2_2:46858127-46858146 | None:intergenic | 30.0% |
| AATTCCTTTCAAAATTGCAG+TGG | - | chr2_2:46858440-46858459 | Msa0254150:intron | 30.0% | |
| ! | GTTCAGTGTTATTGTAAGTA+GGG | + | chr2_2:46858527-46858546 | None:intergenic | 30.0% |
| ATGCAATCCAAATTCATCAT+CGG | + | chr2_2:46858549-46858568 | None:intergenic | 30.0% | |
| AGTCATAATCCTATGAATTC+AGG | - | chr2_2:46858571-46858590 | Msa0254150:intron | 30.0% | |
| GCAAATATGTATGCAATGTT+TGG | + | chr2_2:46858740-46858759 | None:intergenic | 30.0% | |
| ! | TCGAAGTTACATTGCAATTT+TGG | + | chr2_2:46858854-46858873 | None:intergenic | 30.0% |
| TTGTAGTCAAAACTATATGG+TGG | + | chr2_2:46858963-46858982 | None:intergenic | 30.0% | |
| AATGATCTTGAAACCTTCAA+AGG | + | chr2_2:46859082-46859101 | None:intergenic | 30.0% | |
| CAATCTTTACAAGACTATGA+AGG | - | chr2_2:46859133-46859152 | Msa0254150:intron | 30.0% | |
| GTTTAATCAAATGAAGATGC+AGG | - | chr2_2:46859237-46859256 | Msa0254150:intron | 30.0% | |
| CCTTAAAACTATAGACTTCA+TGG | + | chr2_2:46859328-46859347 | None:intergenic | 30.0% | |
| !! | CCATGAAGTCTATAGTTTTA+AGG | - | chr2_2:46859325-46859344 | Msa0254150:intron | 30.0% |
| GTGGAATATGTGGAAATGAA+TGG | + | chr2_2:46851464-46851483 | None:intergenic | 35.0% | |
| GCAAAATCTTTATCTGGGTA+TGG | - | chr2_2:46851872-46851891 | Msa0254150:CDS | 35.0% | |
| AAGCCTCCATGGATATTTAA+AGG | - | chr2_2:46851896-46851915 | Msa0254150:intron | 35.0% | |
| CTTCCTTTAAATATCCATGG+AGG | + | chr2_2:46851902-46851921 | None:intergenic | 35.0% | |
| CTCCATGGATATTTAAAGGA+AGG | - | chr2_2:46851900-46851919 | Msa0254150:intron | 35.0% | |
| CAAAAACAGAACCTCATCAA+AGG | + | chr2_2:46852243-46852262 | None:intergenic | 35.0% | |
| AATAGGATTGTGATGCAAGA+TGG | - | chr2_2:46852719-46852738 | Msa0254150:intron | 35.0% | |
| !! | TTTTTCAATGACATGGGAAC+TGG | + | chr2_2:46852747-46852766 | None:intergenic | 35.0% |
| !!! | GGACATGTATTTTAAAACGG+AGG | + | chr2_2:46853101-46853120 | None:intergenic | 35.0% |
| TAACGGTCAAAATTGTGCAT+TGG | - | chr2_2:46853284-46853303 | Msa0254150:intron | 35.0% | |
| !!! | GACATGTATTTTGAAACGGA+GGG | - | chr2_2:46853329-46853348 | Msa0254150:intron | 35.0% |
| TATTGGTCAAACCTATGCAA+AGG | + | chr2_2:46853376-46853395 | None:intergenic | 35.0% | |
| TTATTATATGTAGGAGGTCG+AGG | + | chr2_2:46853604-46853623 | None:intergenic | 35.0% | |
| AAGATGGGGTTATACACATT+GGG | - | chr2_2:46853647-46853666 | Msa0254150:intron | 35.0% | |
| TGTTATGCACTATGTAGACT+TGG | + | chr2_2:46853739-46853758 | None:intergenic | 35.0% | |
| GTGAAACATTGGAACTTGAA+TGG | + | chr2_2:46853771-46853790 | None:intergenic | 35.0% | |
| GCTGCAACTTTATATTCAAG+TGG | - | chr2_2:46853795-46853814 | Msa0254150:intron | 35.0% | |
| TTTATATTCAAGTGGCACAC+AGG | - | chr2_2:46853803-46853822 | Msa0254150:intron | 35.0% | |
| TTATATTCAAGTGGCACACA+GGG | - | chr2_2:46853804-46853823 | Msa0254150:intron | 35.0% | |
| TCCCCCTCAAATAAAAAAAG+AGG | + | chr2_2:46853879-46853898 | None:intergenic | 35.0% | |
| CAGAAATATACTCCTACTCA+AGG | + | chr2_2:46853916-46853935 | None:intergenic | 35.0% | |
| ! | CTTGAGTAGGAGTATATTTC+TGG | - | chr2_2:46853914-46853933 | Msa0254150:intron | 35.0% |
| !! | CGCCTGGTTTAATTTTGTTA+AGG | - | chr2_2:46854461-46854480 | Msa0254150:intron | 35.0% |
| GACAATTGACAATGGTTGTT+TGG | + | chr2_2:46854899-46854918 | None:intergenic | 35.0% | |
| !!! | GCATTTTTTCTACAGGATGT+TGG | - | chr2_2:46855087-46855106 | Msa0254150:intron | 35.0% |
| ! | CTTTGTTTGCGAATATAGAG+AGG | - | chr2_2:46855207-46855226 | Msa0254150:intron | 35.0% |
| TTTGCGAATATAGAGAGGAA+GGG | - | chr2_2:46855212-46855231 | Msa0254150:intron | 35.0% | |
| ! | AAGGTATAGAGCACTTTGAT+GGG | - | chr2_2:46855271-46855290 | Msa0254150:intron | 35.0% |
| ! | TTTGAGTTCCCCTGAATAAA+GGG | + | chr2_2:46855363-46855382 | None:intergenic | 35.0% |
| !!! | TTTTGAGTTCCCCTGAATAA+AGG | + | chr2_2:46855364-46855383 | None:intergenic | 35.0% |
| ! | AAATTGGTCGAGGATTTTGA+AGG | - | chr2_2:46855387-46855406 | Msa0254150:intron | 35.0% |
| ! | AATTGGTCGAGGATTTTGAA+GGG | - | chr2_2:46855388-46855407 | Msa0254150:intron | 35.0% |
| GCTGGAAATATAGAGGAAAA+TGG | + | chr2_2:46855539-46855558 | None:intergenic | 35.0% | |
| !!! | TGCTATTGTTTTGGGGTTTA+AGG | + | chr2_2:46855844-46855863 | None:intergenic | 35.0% |
| !! | TTTGTTTTCCTGTTCTAGTC+TGG | + | chr2_2:46855907-46855926 | None:intergenic | 35.0% |
| CTTCTCCAACATGAATTGTT+TGG | + | chr2_2:46855973-46855992 | None:intergenic | 35.0% | |
| CAAACAATTCATGTTGGAGA+AGG | - | chr2_2:46855971-46855990 | Msa0254150:intron | 35.0% | |
| AATGGAGAAGACAATGAAGA+TGG | + | chr2_2:46856027-46856046 | None:intergenic | 35.0% | |
| GAAAGTGAAGATGGAGATAA+TGG | + | chr2_2:46856045-46856064 | None:intergenic | 35.0% | |
| TTGGAAGATGAAAGTGAAGA+TGG | + | chr2_2:46856054-46856073 | None:intergenic | 35.0% | |
| ACATTTAGGCGAAGATGAAT+TGG | + | chr2_2:46856073-46856092 | None:intergenic | 35.0% | |
| ATATACATCGGCATATTGGT+GGG | + | chr2_2:46856523-46856542 | None:intergenic | 35.0% | |
| AATATACATCGGCATATTGG+TGG | + | chr2_2:46856524-46856543 | None:intergenic | 35.0% | |
| TGAAAATCTACACCAATTGG+TGG | - | chr2_2:46856587-46856606 | Msa0254150:intron | 35.0% | |
| GAAAATCTACACCAATTGGT+GGG | - | chr2_2:46856588-46856607 | Msa0254150:intron | 35.0% | |
| GTATGCAGATGGAAAACATT+TGG | + | chr2_2:46856642-46856661 | None:intergenic | 35.0% | |
| ! | CAATGAAGTTTGATGACCAT+TGG | - | chr2_2:46856909-46856928 | Msa0254150:intron | 35.0% |
| CCAATCATCATCAAAACCAA+TGG | + | chr2_2:46856928-46856947 | None:intergenic | 35.0% | |
| !!! | CCATTGGTTTTGATGATGAT+TGG | - | chr2_2:46856925-46856944 | Msa0254150:intron | 35.0% |
| ATGGGTGAAAATGTAGAAGA+TGG | - | chr2_2:46856951-46856970 | Msa0254150:intron | 35.0% | |
| !! | AGATGGTGGCACTAAAATTT+TGG | - | chr2_2:46856968-46856987 | Msa0254150:intron | 35.0% |
| ! | TGGCACTAAAATTTTGGATG+AGG | - | chr2_2:46856974-46856993 | Msa0254150:intron | 35.0% |
| TGAGAAGATGAACATTATGG+AGG | - | chr2_2:46857059-46857078 | Msa0254150:intron | 35.0% | |
| AGTAGGTCATAATCACTCAA+GGG | + | chr2_2:46857154-46857173 | None:intergenic | 35.0% | |
| ! | TACTCCAACATGAAGTGTTT+GGG | - | chr2_2:46857170-46857189 | Msa0254150:intron | 35.0% |
| AATTCCCAAACACTTCATGT+TGG | + | chr2_2:46857177-46857196 | None:intergenic | 35.0% | |
| ! | ATGAAGTGTTTGGGAATTGA+AGG | - | chr2_2:46857179-46857198 | Msa0254150:intron | 35.0% |
| AGGTGTTTGGAAGAGTTAAA+TGG | + | chr2_2:46857702-46857721 | None:intergenic | 35.0% | |
| TTAGATGATCATTGGGATTG+CGG | + | chr2_2:46857879-46857898 | None:intergenic | 35.0% | |
| ! | TGCATCGAGAGATTTGATTT+CGG | + | chr2_2:46857914-46857933 | None:intergenic | 35.0% |
| AATATAAGTCTCACAAGTGC+TGG | - | chr2_2:46857946-46857965 | Msa0254150:intron | 35.0% | |
| CTGGTGAGTGAAATTTGATT+TGG | - | chr2_2:46857965-46857984 | Msa0254150:intron | 35.0% | |
| AACTAAACCACAAGAGACAA+TGG | + | chr2_2:46858027-46858046 | None:intergenic | 35.0% | |
| TAGTGTGAAAACCGAAACAA+AGG | + | chr2_2:46858074-46858093 | None:intergenic | 35.0% | |
| !! | GGCTCTTTTTAATTCTGCAA+AGG | + | chr2_2:46858128-46858147 | None:intergenic | 35.0% |
| !! | AAATGTCGCTTCCAAGTTTT+AGG | - | chr2_2:46858346-46858365 | Msa0254150:CDS | 35.0% |
| !! | CAAGAGTACTTAAGGAGTTT+GGG | + | chr2_2:46858482-46858501 | None:intergenic | 35.0% |
| ! | GGTTCAGTGTTATTGTAAGT+AGG | + | chr2_2:46858528-46858547 | None:intergenic | 35.0% |
| !! | AAAATCTCGGTGTTGAAATC+TGG | - | chr2_2:46858640-46858659 | Msa0254150:intron | 35.0% |
| ATCGTTAGATCAAGATCAGA+CGG | + | chr2_2:46858667-46858686 | None:intergenic | 35.0% | |
| TGATCTAACGATCACTATTG+TGG | - | chr2_2:46858675-46858694 | Msa0254150:intron | 35.0% | |
| ATACATATTTGCAACTGCTG+TGG | - | chr2_2:46858748-46858767 | Msa0254150:CDS | 35.0% | |
| TTGCAATGTAACTTCGATTG+AGG | - | chr2_2:46858857-46858876 | Msa0254150:intron | 35.0% | |
| TAGAGAATCGTGTTCAAATG+CGG | + | chr2_2:46858892-46858911 | None:intergenic | 35.0% | |
| TCTTTACAAGACTATGAAGG+CGG | - | chr2_2:46859136-46859155 | Msa0254150:intron | 35.0% | |
| !! | GAGCACTGATAAAGAACAAT+AGG | + | chr2_2:46859271-46859290 | None:intergenic | 35.0% |
| !! | CACAAGATGGAGTTGATACA+AGG | + | chr2_2:46852009-46852028 | None:intergenic | 40.0% |
| CTTTCTCTGCTTTCACAAGA+TGG | + | chr2_2:46852022-46852041 | None:intergenic | 40.0% | |
| AGTTATGAGGATAGTCCAGT+CGG | - | chr2_2:46852215-46852234 | Msa0254150:intron | 40.0% | |
| ! | TTGTGATTGCTGGACTTGTT+TGG | - | chr2_2:46852576-46852595 | Msa0254150:intron | 40.0% |
| AAACATACGCGCATGATGTT+GGG | + | chr2_2:46852607-46852626 | None:intergenic | 40.0% | |
| AAAACATACGCGCATGATGT+TGG | + | chr2_2:46852608-46852627 | None:intergenic | 40.0% | |
| !! | TGGAGAAGAATGGGCTAAAT+AGG | - | chr2_2:46852702-46852721 | Msa0254150:intron | 40.0% |
| CATATGTGAAGTGGTTGACT+TGG | - | chr2_2:46853307-46853326 | Msa0254150:intron | 40.0% | |
| !!! | GGACATGTATTTTGAAACGG+AGG | - | chr2_2:46853328-46853347 | Msa0254150:intron | 40.0% |
| ! | CAATGGTCTTACAATCCACT+GGG | + | chr2_2:46853443-46853462 | None:intergenic | 40.0% |
| ! | TCAATGGTCTTACAATCCAC+TGG | + | chr2_2:46853444-46853463 | None:intergenic | 40.0% |
| AACATTAACATCAGCTCGTG+TGG | + | chr2_2:46853488-46853507 | None:intergenic | 40.0% | |
| !! | TAAATAAGTAGGGGTGTCTG+AGG | - | chr2_2:46853572-46853591 | Msa0254150:intron | 40.0% |
| CAAGATGGGGTTATACACAT+TGG | - | chr2_2:46853646-46853665 | Msa0254150:intron | 40.0% | |
| TTGCAGCACTAGTGAAACAT+TGG | + | chr2_2:46853782-46853801 | None:intergenic | 40.0% | |
| GATGGCGTTTCTATCATCAT+AGG | + | chr2_2:46854230-46854249 | None:intergenic | 40.0% | |
| GGATCAAGTGTCAACATAGA+TGG | + | chr2_2:46854248-46854267 | None:intergenic | 40.0% | |
| CAAAATTAAACCAGGCGCAA+TGG | + | chr2_2:46854458-46854477 | None:intergenic | 40.0% | |
| TTTCAAATTGTAGCTGCCAC+TGG | + | chr2_2:46854717-46854736 | None:intergenic | 40.0% | |
| TGTGAAAAGATGGGCAACAA+AGG | - | chr2_2:46854804-46854823 | Msa0254150:intron | 40.0% | |
| CACATGTGGAACATCATCAA+TGG | + | chr2_2:46854992-46855011 | None:intergenic | 40.0% | |
| GATGATGTTCCACATGTGAT+TGG | - | chr2_2:46854994-46855013 | Msa0254150:intron | 40.0% | |
| CAACACCCAGCACAAATATT+TGG | + | chr2_2:46855061-46855080 | None:intergenic | 40.0% | |
| GAAAATCTAGCCACTTGACT+TGG | + | chr2_2:46855117-46855136 | None:intergenic | 40.0% | |
| ! | TCAAGTGGCTAGATTTTCCA+AGG | - | chr2_2:46855119-46855138 | Msa0254150:intron | 40.0% |
| GTTTGCGAATATAGAGAGGA+AGG | - | chr2_2:46855211-46855230 | Msa0254150:intron | 40.0% | |
| ! | GAAGGTATAGAGCACTTTGA+TGG | - | chr2_2:46855270-46855289 | Msa0254150:intron | 40.0% |
| ! | AGGTATAGAGCACTTTGATG+GGG | - | chr2_2:46855272-46855291 | Msa0254150:intron | 40.0% |
| TTAGAGGGCTGGAAATATAG+AGG | + | chr2_2:46855546-46855565 | None:intergenic | 40.0% | |
| ATATGCATATGTTCGGCAGT+AGG | + | chr2_2:46855679-46855698 | None:intergenic | 40.0% | |
| GAAGAGGATGAGGAACATTT+AGG | + | chr2_2:46856087-46856106 | None:intergenic | 40.0% | |
| !! | AGATGGTGGCACTGAAATTT+TGG | + | chr2_2:46856145-46856164 | None:intergenic | 40.0% |
| ! | ATGGATGAAAGTGCAGAAGA+TGG | + | chr2_2:46856162-46856181 | None:intergenic | 40.0% |
| !! | TTCTGATGATGAGTGGGTTA+TGG | + | chr2_2:46856181-46856200 | None:intergenic | 40.0% |
| !! | CTTTGGTTCTGATGATGAGT+GGG | + | chr2_2:46856187-46856206 | None:intergenic | 40.0% |
| !! | ACTTTGGTTCTGATGATGAG+TGG | + | chr2_2:46856188-46856207 | None:intergenic | 40.0% |
| AGTCAAGCTTAGTATGCGAA+TGG | - | chr2_2:46856458-46856477 | Msa0254150:intron | 40.0% | |
| GTATGCGAATGGAAAACCTT+TGG | - | chr2_2:46856469-46856488 | Msa0254150:intron | 40.0% | |
| CATATTGGTGGGATTCCATT+GGG | + | chr2_2:46856512-46856531 | None:intergenic | 40.0% | |
| ! | ATGGAAAACATTTGGAGCTC+TGG | + | chr2_2:46856634-46856653 | None:intergenic | 40.0% |
| AGTCAAGCTTAGTATGCAGA+TGG | + | chr2_2:46856653-46856672 | None:intergenic | 40.0% | |
| GGTGAAAATGTAGAAGATGG+TGG | - | chr2_2:46856954-46856973 | Msa0254150:intron | 40.0% | |
| ATGTGTAGGCAGAGATGAAT+TGG | - | chr2_2:46857091-46857110 | Msa0254150:intron | 40.0% | |
| GAGTAGGTCATAATCACTCA+AGG | + | chr2_2:46857155-46857174 | None:intergenic | 40.0% | |
| CAAACACTTCATGTTGGAGT+AGG | + | chr2_2:46857171-46857190 | None:intergenic | 40.0% | |
| ! | CTACTCCAACATGAAGTGTT+TGG | - | chr2_2:46857169-46857188 | Msa0254150:intron | 40.0% |
| !! | GGAAGCGACATTTTAATCGT+TGG | + | chr2_2:46858339-46858358 | None:intergenic | 40.0% |
| TCCTTTCAAAATTGCAGTGG+TGG | - | chr2_2:46858443-46858462 | Msa0254150:intron | 40.0% | |
| !! | GCAAGAGTACTTAAGGAGTT+TGG | + | chr2_2:46858483-46858502 | None:intergenic | 40.0% |
| !! | CAATCTGGCAAGAGTACTTA+AGG | + | chr2_2:46858490-46858509 | None:intergenic | 40.0% |
| GACTAAACCTGCATTCAATC+TGG | + | chr2_2:46858505-46858524 | None:intergenic | 40.0% | |
| CACTGAACCGATGATGAATT+TGG | - | chr2_2:46858539-46858558 | Msa0254150:intron | 40.0% | |
| TATGTGACTGCATGAGTTTG+TGG | - | chr2_2:46858703-46858722 | Msa0254150:intron | 40.0% | |
| TTTCATGATCTTCAGTCGCA+TGG | + | chr2_2:46859165-46859184 | None:intergenic | 40.0% | |
| CGGTTTCGATAACATCACAT+AGG | + | chr2_2:46859203-46859222 | None:intergenic | 40.0% | |
| GCGCCAAACGTCGTTATATA+TGG | - | chr2_2:46851384-46851403 | Msa0254150:three_prime_UTR | 45.0% | |
| !!! | ATCCACTGTGTCGTTTTGTG+TGG | + | chr2_2:46851424-46851443 | None:intergenic | 45.0% |
| !! | TAGCAGCTTGTTGTGATTGC+TGG | - | chr2_2:46852566-46852585 | Msa0254150:intron | 45.0% |
| ! | GTGCATTGGCATATGTGAAG+TGG | - | chr2_2:46853298-46853317 | Msa0254150:intron | 45.0% |
| GTCTTACAATCCACTGGGTT+GGG | + | chr2_2:46853438-46853457 | None:intergenic | 45.0% | |
| GATTCATGCATGCCTTGAGT+AGG | - | chr2_2:46853901-46853920 | Msa0254150:intron | 45.0% | |
| GGTGTACGTGAACAACAATG+AGG | - | chr2_2:46854825-46854844 | Msa0254150:intron | 45.0% | |
| ! | AACAATGAGGCTTGCTCTCA+CGG | - | chr2_2:46854838-46854857 | Msa0254150:intron | 45.0% |
| ! | GGTATAGAGCACTTTGATGG+GGG | - | chr2_2:46855273-46855292 | Msa0254150:intron | 45.0% |
| ! | GTATAGAGCACTTTGATGGG+GGG | - | chr2_2:46855274-46855293 | Msa0254150:intron | 45.0% |
| ! | TATAGAGCACTTTGATGGGG+GGG | - | chr2_2:46855275-46855294 | Msa0254150:intron | 45.0% |
| GTAGTGAGAGTCGAGATCTT+AGG | - | chr2_2:46855582-46855601 | Msa0254150:intron | 45.0% | |
| TCGAGATCTTAGGCAAGATC+AGG | - | chr2_2:46855592-46855611 | Msa0254150:intron | 45.0% | |
| CGAGATCTTAGGCAAGATCA+GGG | - | chr2_2:46855593-46855612 | Msa0254150:intron | 45.0% | |
| ATCTTAGGCAAGATCAGGGA+GGG | - | chr2_2:46855597-46855616 | Msa0254150:intron | 45.0% | |
| ! | GTTTTCCTGTTCTAGTCTGG+TGG | + | chr2_2:46855904-46855923 | None:intergenic | 45.0% |
| GGAGAAGACAATGAAGATGG+AGG | + | chr2_2:46856024-46856043 | None:intergenic | 45.0% | |
| !! | GGTGGCACTGAAATTTTGGA+TGG | + | chr2_2:46856141-46856160 | None:intergenic | 45.0% |
| ! | GATGAAAGTGCAGAAGATGG+TGG | + | chr2_2:46856159-46856178 | None:intergenic | 45.0% |
| AAATTGGAGCGCATTCGAGA+TGG | + | chr2_2:46856415-46856434 | None:intergenic | 45.0% | |
| CCTCAGGGTGTAAACGAAAT+TGG | + | chr2_2:46856431-46856450 | None:intergenic | 45.0% | |
| CCAATTTCGTTTACACCCTG+AGG | - | chr2_2:46856428-46856447 | Msa0254150:intron | 45.0% | |
| !! | ATGGAAAACCTTTGGAGCTC+TGG | - | chr2_2:46856477-46856496 | Msa0254150:intron | 45.0% |
| TTGAGTATCCAGAGCTCCAA+AGG | + | chr2_2:46856623-46856642 | None:intergenic | 45.0% | |
| CTCTGGATACTCAAACCCAA+TGG | - | chr2_2:46856494-46856513 | Msa0254150:intron | 45.0% | |
| GCATATTGGTGGGATTCCAT+TGG | + | chr2_2:46856513-46856532 | None:intergenic | 45.0% | |
| CTCTGGATACTCAAACCCAA+CGG | + | chr2_2:46856494-46856513 | None:intergenic | 45.0% | |
| !! | AGCTTGACTTGTAGTTCCTG+AGG | - | chr2_2:46856664-46856683 | Msa0254150:intron | 45.0% |
| !! | GCTTGACTTGTAGTTCCTGA+GGG | - | chr2_2:46856665-46856684 | Msa0254150:intron | 45.0% |
| GGAGGTAGAGATGAATGTGT+AGG | - | chr2_2:46857077-46857096 | Msa0254150:intron | 45.0% | |
| GTAGGCAGAGATGAATTGGA+AGG | - | chr2_2:46857095-46857114 | Msa0254150:intron | 45.0% | |
| GTCACTAGATTGTGAATCGG+GGG | + | chr2_2:46857534-46857553 | None:intergenic | 45.0% | |
| GGTCACTAGATTGTGAATCG+GGG | + | chr2_2:46857535-46857554 | None:intergenic | 45.0% | |
| GGGTCACTAGATTGTGAATC+GGG | + | chr2_2:46857536-46857555 | None:intergenic | 45.0% | |
| GGGGTCACTAGATTGTGAAT+CGG | + | chr2_2:46857537-46857556 | None:intergenic | 45.0% | |
| ATAGTCAGAGTCGAGATCCT+GGG | + | chr2_2:46857572-46857591 | None:intergenic | 45.0% | |
| GCTGTCTCAAGACAATCAAG+AGG | - | chr2_2:46857811-46857830 | Msa0254150:intron | 45.0% | |
| TCTCAAGACAATCAAGAGGC+AGG | - | chr2_2:46857815-46857834 | Msa0254150:intron | 45.0% | |
| ATCATTGGGATTGCGGAACT+CGG | + | chr2_2:46857872-46857891 | None:intergenic | 45.0% | |
| GCTTATGCCATTGTCTCTTG+TGG | - | chr2_2:46858017-46858036 | Msa0254150:intron | 45.0% | |
| AGCCCTGTTTATGTAAGACG+CGG | - | chr2_2:46858144-46858163 | Msa0254150:intron | 45.0% | |
| CTCCGCGTCTTACATAAACA+GGG | + | chr2_2:46858149-46858168 | None:intergenic | 45.0% | |
| TCTCCGCGTCTTACATAAAC+AGG | + | chr2_2:46858150-46858169 | None:intergenic | 45.0% | |
| ! | TTTGAGGTTTGACCGTTGGA+TGG | - | chr2_2:46858311-46858330 | Msa0254150:intron | 45.0% |
| TTGAGGTTTGACCGTTGGAT+GGG | - | chr2_2:46858312-46858331 | Msa0254150:intron | 45.0% | |
| ! | GCCACCACTGCAATTTTGAA+AGG | + | chr2_2:46858447-46858466 | None:intergenic | 45.0% |
| ACTCTTGCCAGATTGAATGC+AGG | - | chr2_2:46858495-46858514 | Msa0254150:intron | 45.0% | |
| !! | CACAGGTCAGAAAGTTTTGG+AGG | + | chr2_2:46858805-46858824 | None:intergenic | 45.0% |
| ! | CGACACAGGTCAGAAAGTTT+TGG | + | chr2_2:46858808-46858827 | None:intergenic | 45.0% |
| AAACTTTCTGACCTGTGTCG+CGG | - | chr2_2:46858808-46858827 | Msa0254150:intron | 45.0% | |
| AACTTCGATTGAGGCCACAT+TGG | - | chr2_2:46858866-46858885 | Msa0254150:intron | 45.0% | |
| GGAACAGAGCTTACAGTAGT+AGG | + | chr2_2:46859307-46859326 | None:intergenic | 45.0% | |
| !! | AATTTAATAATTAAAAAAGA+TGG | - | chr2_2:46852682-46852701 | Msa0254150:intron | 5.0% |
| !!! | TTTTTATAATTTTTTACTTT+AGG | - | chr2_2:46853248-46853267 | Msa0254150:intron | 5.0% |
| !! | CAAAAAAAATAAAAAATAAT+AGG | + | chr2_2:46853515-46853534 | None:intergenic | 5.0% |
| !! | AATATTATAATTCTAAATTT+CGG | + | chr2_2:46855761-46855780 | None:intergenic | 5.0% |
| !!! | CAATATATAAATTTTAAATT+TGG | - | chr2_2:46857482-46857501 | Msa0254150:intron | 5.0% |
| ATATAACGACGTTTGGCGCG+CGG | + | chr2_2:46851383-46851402 | None:intergenic | 50.0% | |
| GTCCACACAAAACGACACAG+TGG | - | chr2_2:46851419-46851438 | Msa0254150:three_prime_UTR | 50.0% | |
| GGTCTTACAATCCACTGGGT+TGG | + | chr2_2:46853439-46853458 | None:intergenic | 50.0% | |
| TAACCCCATCTTGCGAGGTT+GGG | + | chr2_2:46853639-46853658 | None:intergenic | 50.0% | |
| ATAACCCCATCTTGCGAGGT+TGG | + | chr2_2:46853640-46853659 | None:intergenic | 50.0% | |
| GTGTATAACCCCATCTTGCG+AGG | + | chr2_2:46853644-46853663 | None:intergenic | 50.0% | |
| TGTTGGGCTTCCAAGTCAAG+TGG | - | chr2_2:46855104-46855123 | Msa0254150:intron | 50.0% | |
| GCGAATATAGAGAGGAAGGG+AGG | - | chr2_2:46855215-46855234 | Msa0254150:intron | 50.0% | |
| ! | ATAGAGCACTTTGATGGGGG+GGG | - | chr2_2:46855276-46855295 | Msa0254150:intron | 50.0% |
| !! | TTGGAGGAGAGGGCTTTAGA+GGG | + | chr2_2:46855561-46855580 | None:intergenic | 50.0% |
| TCTCACTACCTTGGAGGAGA+GGG | + | chr2_2:46855571-46855590 | None:intergenic | 50.0% | |
| GATCTCGACTCTCACTACCT+TGG | + | chr2_2:46855580-46855599 | None:intergenic | 50.0% | |
| GATCTTAGGCAAGATCAGGG+AGG | - | chr2_2:46855596-46855615 | Msa0254150:intron | 50.0% | |
| TCTAGTCTGGTGGCTGCATT+GGG | + | chr2_2:46855894-46855913 | None:intergenic | 50.0% | |
| TTCTAGTCTGGTGGCTGCAT+TGG | + | chr2_2:46855895-46855914 | None:intergenic | 50.0% | |
| !! | GCTTGACTTGCAGTTCCTCA+GGG | + | chr2_2:46856446-46856465 | None:intergenic | 50.0% |
| !! | AGCTTGACTTGCAGTTCCTC+AGG | + | chr2_2:46856447-46856466 | None:intergenic | 50.0% |
| ACCAATTGGTGGGATTCCGT+TGG | - | chr2_2:46856598-46856617 | Msa0254150:intron | 50.0% | |
| CCAATTGGTGGGATTCCGTT+GGG | - | chr2_2:46856599-46856618 | Msa0254150:intron | 50.0% | |
| TGAATCGGGGGATCGTAACA+CGG | + | chr2_2:46857522-46857541 | None:intergenic | 50.0% | |
| GATAGTCAGAGTCGAGATCC+TGG | + | chr2_2:46857573-46857592 | None:intergenic | 50.0% | |
| AGACAATCAAGAGGCAGGAG+TGG | - | chr2_2:46857820-46857839 | Msa0254150:intron | 50.0% | |
| GACAATCAAGAGGCAGGAGT+GGG | - | chr2_2:46857821-46857840 | Msa0254150:intron | 50.0% | |
| GGCACTGCTATCAACATGCT+TGG | + | chr2_2:46858288-46858307 | None:intergenic | 50.0% | |
| TGATAGCAGTGCCTGCTTTG+AGG | - | chr2_2:46858295-46858314 | Msa0254150:intron | 50.0% | |
| CAACGGTCAAACCTCAAAGC+AGG | + | chr2_2:46858309-46858328 | None:intergenic | 50.0% | |
| !! | CTGCTTTGAGGTTTGACCGT+TGG | - | chr2_2:46858307-46858326 | Msa0254150:intron | 50.0% |
| TGAGGTTTGACCGTTGGATG+GGG | - | chr2_2:46858313-46858332 | Msa0254150:intron | 50.0% | |
| TAATCGTTGGCCCCATCCAA+CGG | + | chr2_2:46858326-46858345 | None:intergenic | 50.0% | |
| GGCTGACTGCCTGAATTCAT+AGG | + | chr2_2:46858583-46858602 | None:intergenic | 50.0% | |
| ATTCAGGCAGTCAGCCACAT+CGG | - | chr2_2:46858587-46858606 | Msa0254150:intron | 50.0% | |
| ! | GGTGGCGGTTGGATCAAAAT+CGG | - | chr2_2:46858608-46858627 | Msa0254150:intron | 50.0% |
| GTGTTCAAATGCGGCCAATG+TGG | + | chr2_2:46858883-46858902 | None:intergenic | 50.0% | |
| CACGATTCTCTACACTGCCA+TGG | - | chr2_2:46858900-46858919 | Msa0254150:CDS | 50.0% | |
| ! | CACTGCCATGGATTGTCACA+TGG | - | chr2_2:46858912-46858931 | Msa0254150:CDS | 50.0% |
| TACGGCCATGTGACAATCCA+TGG | + | chr2_2:46858920-46858939 | None:intergenic | 50.0% | |
| GCAAGCAGTGAAGCCTTTGA+AGG | - | chr2_2:46859066-46859085 | Msa0254150:CDS | 50.0% | |
| CTGGGTATGGTAAGCCTCCA+TGG | - | chr2_2:46851885-46851904 | Msa0254150:intron | 55.0% | |
| ! | TCCAGTCGGTGCCTTTGATG+AGG | - | chr2_2:46852229-46852248 | Msa0254150:intron | 55.0% |
| !! | ACCTCATCAAAGGCACCGAC+TGG | + | chr2_2:46852233-46852252 | None:intergenic | 55.0% |
| CATACGCGCATGATGTTGGG+CGG | + | chr2_2:46852604-46852623 | None:intergenic | 55.0% | |
| TTCTACTTGGCCATTGCGCC+TGG | - | chr2_2:46854445-46854464 | Msa0254150:intron | 55.0% | |
| ! | GGCTTGCTCTCACGGAAGAA+AGG | - | chr2_2:46854846-46854865 | Msa0254150:intron | 55.0% |
| ! | TAGAGCACTTTGATGGGGGG+GGG | - | chr2_2:46855277-46855296 | Msa0254150:intron | 55.0% |
| ! | CTTGGAGGAGAGGGCTTTAG+AGG | + | chr2_2:46855562-46855581 | None:intergenic | 55.0% |
| !! | CTCTAAAGCCCTCTCCTCCA+AGG | - | chr2_2:46855560-46855579 | Msa0254150:intron | 55.0% |
| CTCTCACTACCTTGGAGGAG+AGG | + | chr2_2:46855572-46855591 | None:intergenic | 55.0% | |
| CTCGACTCTCACTACCTTGG+AGG | + | chr2_2:46855577-46855596 | None:intergenic | 55.0% | |
| TGCAGCCACCAGACTAGAAC+AGG | - | chr2_2:46855896-46855915 | Msa0254150:intron | 55.0% | |
| CCCAACGGAATCCCACCAAT+TGG | + | chr2_2:46856602-46856621 | None:intergenic | 55.0% | |
| GCACTCTCATTCACACCCTC+AGG | + | chr2_2:46856683-46856702 | None:intergenic | 55.0% | |
| TCGAGATCCTGGGCAAGATC+GGG | + | chr2_2:46857562-46857581 | None:intergenic | 55.0% | |
| GTCGAGATCCTGGGCAAGAT+CGG | + | chr2_2:46857563-46857582 | None:intergenic | 55.0% | |
| AATCCATTGTGCCGCGACAC+AGG | + | chr2_2:46858822-46858841 | None:intergenic | 55.0% | |
| GGTTGAGCTACCCAACCCAG+TGG | - | chr2_2:46853425-46853444 | Msa0254150:intron | 60.0% | |
| TCCCTCCCAACCTCGCAAGA+TGG | - | chr2_2:46853631-46853650 | Msa0254150:intron | 60.0% | |
| CCCATCTTGCGAGGTTGGGA+GGG | + | chr2_2:46853635-46853654 | None:intergenic | 60.0% | |
| CCCTCCCAACCTCGCAAGAT+GGG | - | chr2_2:46853632-46853651 | Msa0254150:intron | 60.0% | |
| CCTCCCAACCTCGCAAGATG+GGG | - | chr2_2:46853633-46853652 | Msa0254150:intron | 60.0% | |
| ! | AGAGCACTTTGATGGGGGGG+GGG | - | chr2_2:46855278-46855297 | Msa0254150:intron | 60.0% |
| !! | AGGAGAGGGCTTTAGAGGGC+TGG | + | chr2_2:46855557-46855576 | None:intergenic | 60.0% |
| ATCCTGGGCAAGATCGGGGA+GGG | + | chr2_2:46857557-46857576 | None:intergenic | 60.0% | |
| CGAGATCCTGGGCAAGATCG+GGG | + | chr2_2:46857561-46857580 | None:intergenic | 60.0% | |
| TGATCCAACCGCCACCGATG+TGG | + | chr2_2:46858604-46858623 | None:intergenic | 60.0% | |
| TGACCTGTGTCGCGGCACAA+TGG | - | chr2_2:46858816-46858835 | Msa0254150:intron | 60.0% | |
| CCCCATCTTGCGAGGTTGGG+AGG | + | chr2_2:46853636-46853655 | None:intergenic | 65.0% | |
| GAGCACTTTGATGGGGGGGG+GGG | - | chr2_2:46855279-46855298 | Msa0254150:intron | 65.0% | |
| AGCACTTTGATGGGGGGGGG+GGG | - | chr2_2:46855280-46855299 | Msa0254150:intron | 65.0% | |
| TCCTGGGCAAGATCGGGGAG+GGG | + | chr2_2:46857556-46857575 | None:intergenic | 65.0% | |
| GATCCTGGGCAAGATCGGGG+AGG | + | chr2_2:46857558-46857577 | None:intergenic | 65.0% | |
| CAGGCAGTCAGCCACATCGG+TGG | - | chr2_2:46858590-46858609 | Msa0254150:intron | 65.0% | |
| GCAGTCAGCCACATCGGTGG+CGG | - | chr2_2:46858593-46858612 | Msa0254150:intron | 65.0% | |
| ! | TCAGCCACATCGGTGGCGGT+TGG | - | chr2_2:46858597-46858616 | Msa0254150:intron | 65.0% |
| GCACTTTGATGGGGGGGGGG+GGG | - | chr2_2:46855281-46855300 | Msa0254150:intron | 70.0% | |
| CACTTTGATGGGGGGGGGGG+GGG | - | chr2_2:46855282-46855301 | Msa0254150:intron | 70.0% | |
| ACTTTGATGGGGGGGGGGGG+GGG | - | chr2_2:46855283-46855302 | Msa0254150:intron | 70.0% | |
| ACCCCTCCCCGATCTTGCCC+AGG | - | chr2_2:46857552-46857571 | Msa0254150:intron | 70.0% | |
| CTTTGATGGGGGGGGGGGGG+GGG | - | chr2_2:46855284-46855303 | Msa0254150:intron | 75.0% | |
| TTTGATGGGGGGGGGGGGGG+GGG | - | chr2_2:46855285-46855304 | Msa0254150:intron | 75.0% | |
| ! | TTGATGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855286-46855305 | Msa0254150:intron | 80.0% |
| ! | TGATGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855287-46855306 | Msa0254150:intron | 85.0% |
| ! | GATGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855288-46855307 | Msa0254150:intron | 90.0% |
| ! | ATGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855289-46855308 | Msa0254150:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr2_2:46855290-46855309 | Msa0254150:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 46851380 | 46859580 | 46851380 | ID=Msa0254150;Name=Msa0254150 |
| chr2_2 | mRNA | 46851380 | 46859580 | 46851380 | ID=Msa0254150-mRNA-1;Parent=Msa0254150;Name=Msa0254150-mRNA-1;_AED=0.23;_eAED=0.23;_QI=244|0.88|1|1|0.88|0.8|10|250|283 |
| chr2_2 | exon | 46851380 | 46851897 | 46851380 | ID=Msa0254150-mRNA-1:exon:14318;Parent=Msa0254150-mRNA-1 |
| chr2_2 | exon | 46852593 | 46852656 | 46852593 | ID=Msa0254150-mRNA-1:exon:14317;Parent=Msa0254150-mRNA-1 |
| chr2_2 | exon | 46852993 | 46853158 | 46852993 | ID=Msa0254150-mRNA-1:exon:14316;Parent=Msa0254150-mRNA-1 |
| chr2_2 | exon | 46855820 | 46855858 | 46855820 | ID=Msa0254150-mRNA-1:exon:14315;Parent=Msa0254150-mRNA-1 |
| chr2_2 | exon | 46856093 | 46856147 | 46856093 | ID=Msa0254150-mRNA-1:exon:14314;Parent=Msa0254150-mRNA-1 |
| chr2_2 | exon | 46858342 | 46858388 | 46858342 | ID=Msa0254150-mRNA-1:exon:14313;Parent=Msa0254150-mRNA-1 |
| chr2_2 | exon | 46858710 | 46858773 | 46858710 | ID=Msa0254150-mRNA-1:exon:14312;Parent=Msa0254150-mRNA-1 |
| chr2_2 | exon | 46858873 | 46858956 | 46858873 | ID=Msa0254150-mRNA-1:exon:14311;Parent=Msa0254150-mRNA-1 |
| chr2_2 | exon | 46859039 | 46859106 | 46859039 | ID=Msa0254150-mRNA-1:exon:14310;Parent=Msa0254150-mRNA-1 |
| chr2_2 | exon | 46859340 | 46859580 | 46859340 | ID=Msa0254150-mRNA-1:exon:14309;Parent=Msa0254150-mRNA-1 |
| chr2_2 | five_prime_UTR | 46859340 | 46859580 | 46859340 | ID=Msa0254150-mRNA-1:five_prime_utr;Parent=Msa0254150-mRNA-1 |
| chr2_2 | five_prime_UTR | 46859104 | 46859106 | 46859104 | ID=Msa0254150-mRNA-1:five_prime_utr;Parent=Msa0254150-mRNA-1 |
| chr2_2 | CDS | 46859039 | 46859103 | 46859039 | ID=Msa0254150-mRNA-1:cds;Parent=Msa0254150-mRNA-1 |
| chr2_2 | CDS | 46858873 | 46858956 | 46858873 | ID=Msa0254150-mRNA-1:cds;Parent=Msa0254150-mRNA-1 |
| chr2_2 | CDS | 46858710 | 46858773 | 46858710 | ID=Msa0254150-mRNA-1:cds;Parent=Msa0254150-mRNA-1 |
| chr2_2 | CDS | 46858342 | 46858388 | 46858342 | ID=Msa0254150-mRNA-1:cds;Parent=Msa0254150-mRNA-1 |
| chr2_2 | CDS | 46856093 | 46856147 | 46856093 | ID=Msa0254150-mRNA-1:cds;Parent=Msa0254150-mRNA-1 |
| chr2_2 | CDS | 46855820 | 46855858 | 46855820 | ID=Msa0254150-mRNA-1:cds;Parent=Msa0254150-mRNA-1 |
| chr2_2 | CDS | 46852993 | 46853158 | 46852993 | ID=Msa0254150-mRNA-1:cds;Parent=Msa0254150-mRNA-1 |
| chr2_2 | CDS | 46852593 | 46852656 | 46852593 | ID=Msa0254150-mRNA-1:cds;Parent=Msa0254150-mRNA-1 |
| chr2_2 | CDS | 46851630 | 46851897 | 46851630 | ID=Msa0254150-mRNA-1:cds;Parent=Msa0254150-mRNA-1 |
| chr2_2 | three_prime_UTR | 46851380 | 46851629 | 46851380 | ID=Msa0254150-mRNA-1:three_prime_utr;Parent=Msa0254150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
