Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213750 | RHN74815.1 | 93.233 | 133 | 9 | 0 | 1 | 133 | 176 | 308 | 2.31e-85 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213750 | sp|K4DEY3|NDX1_SOLLC | 52.679 | 112 | 49 | 2 | 13 | 122 | 183 | 292 | 2.88e-30 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213750 | A0A396JEG1 | 93.233 | 133 | 9 | 0 | 1 | 133 | 176 | 308 | 1.10e-85 | 261 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030310 | Msa0213750 | 0.825683 | 4.100969e-54 | -8.615850e-47 |
| Msa0172350 | Msa0213750 | 0.820883 | 5.420868e-53 | -8.615850e-47 |
| Msa0213750 | Msa0254150 | 0.868901 | 4.624606e-66 | -8.615850e-47 |
| Msa0213750 | Msa0267760 | 0.823451 | 1.375554e-53 | -8.615850e-47 |
| Msa0213750 | Msa0293370 | 0.846963 | 1.561014e-59 | -8.615850e-47 |
| Msa0213750 | Msa0331390 | 0.809738 | 1.631034e-50 | -8.615850e-47 |
| Msa0213750 | Msa0429520 | -0.814392 | 1.577473e-51 | -8.615850e-47 |
| Msa0213750 | Msa0429530 | -0.813652 | 2.296358e-51 | -8.615850e-47 |
| Msa0213750 | Msa0490300 | 0.824408 | 8.201713e-54 | -8.615850e-47 |
| Msa0213750 | Msa0526700 | 0.845048 | 5.177505e-59 | -8.615850e-47 |
| Msa0213750 | Msa0526710 | 0.820111 | 8.151996e-53 | -8.615850e-47 |
| Msa0213750 | Msa0607480 | 0.830162 | 3.430260e-55 | -8.615850e-47 |
| Msa0213750 | Msa0642650 | 0.824112 | 9.630119e-54 | -8.615850e-47 |
| Msa0213750 | Msa0647750 | 0.806791 | 6.927641e-50 | -8.615850e-47 |
| Msa0213750 | Msa0743680 | 0.801625 | 8.243963e-49 | -8.615850e-47 |
| Msa0213750 | Msa0784620 | 0.800026 | 1.747955e-48 | -8.615850e-47 |
| Msa0213750 | Msa0890250 | 0.806004 | 1.015072e-49 | -8.615850e-47 |
| Msa0213750 | Msa0925160 | 0.811556 | 6.598454e-51 | -8.615850e-47 |
| Msa0213750 | Msa0972730 | 0.813610 | 2.346117e-51 | -8.615850e-47 |
| Msa0213750 | Msa1183390 | 0.815747 | 7.889003e-52 | -8.615850e-47 |
| Msa0213750 | Msa1271510 | 0.817662 | 2.935284e-52 | -8.615850e-47 |
| Msa0213750 | Msa1309360 | 0.810728 | 9.979707e-51 | -8.615850e-47 |
| Msa0213750 | Msa1382310 | 0.802214 | 6.239098e-49 | -8.615850e-47 |
| Msa0213750 | Msa1390310 | 0.832403 | 9.643164e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213750 | MtrunA17_Chr2g0314411 | 93.233 | 133 | 9 | 0 | 1 | 133 | 176 | 308 | 2.12e-89 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213750 | AT1G28100.1 | 48.182 | 110 | 50 | 3 | 9 | 118 | 177 | 279 | 3.43e-27 | 102 |
| Msa0213750 | AT1G28100.2 | 48.182 | 110 | 50 | 3 | 9 | 118 | 177 | 279 | 3.43e-27 | 102 |
| Msa0213750 | AT1G28100.6 | 48.182 | 110 | 50 | 3 | 9 | 118 | 177 | 279 | 3.43e-27 | 102 |
| Msa0213750 | AT1G28100.3 | 48.182 | 110 | 50 | 3 | 9 | 118 | 177 | 279 | 3.43e-27 | 102 |
| Msa0213750 | AT1G28100.4 | 48.182 | 110 | 50 | 3 | 9 | 118 | 185 | 287 | 4.00e-27 | 102 |
Find 74 sgRNAs with CRISPR-Local
Find 521 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATTGGTTGAAGCTTT+TGG | 0.161956 | 2_1:+57327890 | Msa0213750:five_prime_UTR |
| TCAACCAATTTGAATTCTTT+TGG | 0.197334 | 2_1:-57327881 | None:intergenic |
| TTGTCATCAACATTTGTTAA+AGG | 0.212830 | 2_1:-57335643 | None:intergenic |
| GTAGAAGCAAAATCTTTATC+TGG | 0.275192 | 2_1:+57327690 | Msa0213750:five_prime_UTR |
| GCGCCAAACGTCGTTATATA+TGG | 0.320087 | 2_1:+57327212 | Msa0213750:five_prime_UTR |
| TATTCCAAAAGAATTCAAAT+TGG | 0.322226 | 2_1:+57327877 | Msa0213750:five_prime_UTR |
| TTTCATGATCTTTAGTCATA+TGG | 0.330310 | 2_1:-57335702 | None:intergenic |
| TGTCATCAACATTTGTTAAA+GGG | 0.337451 | 2_1:-57335642 | None:intergenic |
| TTGAACATTTAGATGATCAT+TGG | 0.349247 | 2_1:-57334424 | None:intergenic |
| CTTTCTCTGCTTTCACAAGA+TGG | 0.361340 | 2_1:-57327844 | None:intergenic |
| ATGCTTTCAACAATTTCTTA+AGG | 0.378352 | 2_1:+57327427 | Msa0213750:five_prime_UTR |
| TAGCAGCTTGTTGTGATTGC+AGG | 0.385086 | 2_1:+57329374 | Msa0213750:intron |
| TTGTGATTGCAGGACTGGTT+TGG | 0.393838 | 2_1:+57329384 | Msa0213750:five_prime_UTR |
| GAGCACTGATAAAGAACAAT+AGG | 0.395901 | 2_1:-57335808 | None:intergenic |
| CAAGAGTACTTAAGGAGGTT+AGG | 0.401156 | 2_1:-57335018 | None:intergenic |
| CAATCTGGCAAGAGTACTTA+AGG | 0.405539 | 2_1:-57335026 | None:intergenic |
| TAACCATATATAACGACGTT+TGG | 0.415383 | 2_1:-57327215 | None:intergenic |
| TGATAGCAGTGCCTGCTTTG+AGG | 0.417708 | 2_1:+57334834 | Msa0213750:CDS |
| TGAACATTTAGATGATCATT+GGG | 0.419933 | 2_1:-57334423 | None:intergenic |
| TTAAACTTGAGTGTTAATAT+CGG | 0.424529 | 2_1:-57335760 | None:intergenic |
| GGAACAGGGCTTACAGTAGT+AGG | 0.440535 | 2_1:-57335844 | None:intergenic |
| GAACATACGCGCATGATGTT+GGG | 0.448354 | 2_1:-57329412 | None:intergenic |
| GCTTGTTGTGATTGCAGGAC+TGG | 0.448463 | 2_1:+57329379 | Msa0213750:intron |
| TGCATCGAGAGATTTGATTT+CGG | 0.456818 | 2_1:-57334451 | None:intergenic |
| GGCCAAACCTGCATTCAATC+TGG | 0.459932 | 2_1:-57335041 | None:intergenic |
| GAAAATCTAGCCACTTGACT+TGG | 0.464485 | 2_1:-57331577 | None:intergenic |
| AAGCCTCCATGGATATTTAG+AGG | 0.467483 | 2_1:+57327720 | Msa0213750:five_prime_UTR |
| AGAACATACGCGCATGATGT+TGG | 0.474921 | 2_1:-57329413 | None:intergenic |
| ACCTCATCAAAGGCACCGAC+TGG | 0.476368 | 2_1:-57328059 | None:intergenic |
| AACAACGAGGCTTGCTCTCA+CGG | 0.476725 | 2_1:+57331336 | Msa0213750:five_prime_UTR |
| CACAAGATGGAGTTGATACA+AGG | 0.485373 | 2_1:-57327831 | None:intergenic |
| TTGTTTAAGACATGTTCAAT+TGG | 0.485652 | 2_1:+57336091 | Msa0213750:three_prime_UTR |
| GAAATGATTTACCTAAAACT+TGG | 0.487429 | 2_1:-57334896 | None:intergenic |
| CTGCTTTGAGGTTTGACCGT+TGG | 0.488455 | 2_1:+57334846 | Msa0213750:CDS |
| CTGGGTATGGTAAGCCTCCA+TGG | 0.488508 | 2_1:+57327709 | Msa0213750:five_prime_UTR |
| TTTGAGGTTTGACCGTTGGA+TGG | 0.490339 | 2_1:+57334850 | Msa0213750:CDS |
| TTGAGGTTTGACCGTTGGAT+GGG | 0.491225 | 2_1:+57334851 | Msa0213750:CDS |
| GCAAAATCTTTATCTGGGTA+TGG | 0.492394 | 2_1:+57327696 | Msa0213750:five_prime_UTR |
| GCAAGCAGTGAAGCCTTTGA+AGG | 0.502040 | 2_1:+57335606 | Msa0213750:CDS |
| GGCTTGCTCTCACGGAAGAA+AGG | 0.503623 | 2_1:+57331344 | Msa0213750:five_prime_UTR |
| CTTGTGAGACTTATATTACA+AGG | 0.511170 | 2_1:-57334480 | None:intergenic |
| AATGATCTTGAAACCTTCAA+AGG | 0.511532 | 2_1:-57335619 | None:intergenic |
| ATCATTGGGATTGCGGAACT+CGG | 0.513694 | 2_1:-57334409 | None:intergenic |
| TTAAGAAATTGTTGAAAGCA+TGG | 0.518111 | 2_1:-57327425 | None:intergenic |
| AAGTAAAGTAGTGGAATATG+TGG | 0.521558 | 2_1:-57327299 | None:intergenic |
| AATATAAGTCTCACAAGTGT+TGG | 0.523737 | 2_1:+57334486 | Msa0213750:five_prime_UTR |
| GAAAGCATGGTGTATAAGAA+TGG | 0.524109 | 2_1:-57327412 | None:intergenic |
| TGAGGTTTGACCGTTGGATG+GGG | 0.524143 | 2_1:+57334852 | Msa0213750:CDS |
| TAGCATAAGAAGTAAAGTAG+TGG | 0.524756 | 2_1:-57327308 | None:intergenic |
| TCTCAAGACAATCAAGAGGC+AGG | 0.528834 | 2_1:+57334355 | Msa0213750:five_prime_UTR |
| TTAGATGATCATTGGGATTG+CGG | 0.530128 | 2_1:-57334416 | None:intergenic |
| GTGGAATATGTGGAAATGAA+TGG | 0.531426 | 2_1:-57327289 | None:intergenic |
| TAGAAGCAAAATCTTTATCT+GGG | 0.536038 | 2_1:+57327691 | Msa0213750:five_prime_UTR |
| TACCTTCCTCTAAATATCCA+TGG | 0.538342 | 2_1:-57327726 | None:intergenic |
| AATTACATTCATAAGCAAGA+AGG | 0.538902 | 2_1:-57335929 | None:intergenic |
| ACTCTTGCCAGATTGAATGC+AGG | 0.543041 | 2_1:+57335034 | Msa0213750:CDS |
| CTCCATGGATATTTAGAGGA+AGG | 0.562555 | 2_1:+57327724 | Msa0213750:five_prime_UTR |
| TCCAGTCGGTGCCTTTGATG+AGG | 0.565520 | 2_1:+57328058 | Msa0213750:five_prime_UTR |
| TAATCGTTGGCCCCATCCAA+CGG | 0.567276 | 2_1:-57334862 | None:intergenic |
| CAAACTTTACAAGACTATGA+AGG | 0.570719 | 2_1:+57335673 | Msa0213750:CDS |
| AGACAATCAAGAGGCAGGAG+TGG | 0.576109 | 2_1:+57334360 | Msa0213750:five_prime_UTR |
| TTGTGAAAAGATGGGCAACA+AGG | 0.576228 | 2_1:+57331301 | Msa0213750:intron |
| CAACGGTCAAACCTCAAAGC+AGG | 0.590172 | 2_1:-57334845 | None:intergenic |
| TGTGAAAAGATGGGCAACAA+GGG | 0.594971 | 2_1:+57331302 | Msa0213750:intron |
| GCAGTCTCAAGACAATCAAG+AGG | 0.617099 | 2_1:+57334351 | Msa0213750:five_prime_UTR |
| CGGTTTCGATAACATCACAT+AGG | 0.621776 | 2_1:-57335740 | None:intergenic |
| AGTTATGATGATAGTCCAGT+CGG | 0.644475 | 2_1:+57328044 | Msa0213750:five_prime_UTR |
| TGTGGGGCTTCCAAGTCAAG+TGG | 0.652005 | 2_1:+57331567 | Msa0213750:five_prime_UTR |
| ATATAACGACGTTTGGCGCG+CGG | 0.663679 | 2_1:-57327208 | None:intergenic |
| TCTGGCAAGAGTACTTAAGG+AGG | 0.687464 | 2_1:-57335023 | None:intergenic |
| ACTTTGTTGAAAGAATGAGA+AGG | 0.704309 | 2_1:-57327342 | None:intergenic |
| CTTCCTCTAAATATCCATGG+AGG | 0.707407 | 2_1:-57327723 | None:intergenic |
| GTCCACACAAAACGACACAG+TGG | 0.745105 | 2_1:+57327247 | Msa0213750:five_prime_UTR |
| GGTGTACGTGAACAACAACG+AGG | 0.823307 | 2_1:+57331323 | Msa0213750:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTATTATTTATA+AGG | - | chr2_1:57327579-57327598 | None:intergenic | 0.0% |
| !! | TAAAAATTAAAAATATATTA+AGG | + | chr2_1:57331779-57331798 | Msa0213750:intron | 0.0% |
| !!! | AATATATAAATTTTTAAATT+TGG | - | chr2_1:57331985-57332004 | None:intergenic | 0.0% |
| !! | AATAAAATTAAAAAAAATTA+AGG | + | chr2_1:57332733-57332752 | Msa0213750:intron | 0.0% |
| !! | CATTTAATAAATGATATATT+TGG | + | chr2_1:57329301-57329320 | Msa0213750:intron | 10.0% |
| !! | TAATTTATTTATGTTATGTA+TGG | + | chr2_1:57329325-57329344 | Msa0213750:intron | 10.0% |
| !! | CTAAAAAAAGAAAATTATAT+AGG | + | chr2_1:57329765-57329784 | Msa0213750:intron | 10.0% |
| !! | AATATATGTACTTATATTTA+AGG | + | chr2_1:57329976-57329995 | Msa0213750:intron | 10.0% |
| !!! | TAAAAGAAAAGTTATTTTTT+AGG | + | chr2_1:57330034-57330053 | Msa0213750:intron | 10.0% |
| !! | ATGTATTTCATATATATTAT+AGG | - | chr2_1:57330085-57330104 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTATTTTGGTTA+AGG | + | chr2_1:57330957-57330976 | Msa0213750:intron | 10.0% |
| !! | TAAAATTATTTATATAGCAA+GGG | - | chr2_1:57331247-57331266 | None:intergenic | 10.0% |
| !! | ATAAAATTATTTATATAGCA+AGG | - | chr2_1:57331248-57331267 | None:intergenic | 10.0% |
| !!! | TATAAATTTTTAAATTTGGT+AGG | - | chr2_1:57331981-57332000 | None:intergenic | 10.0% |
| !!! | TTTTTTAATTTTATTGTTCA+AGG | - | chr2_1:57332728-57332747 | None:intergenic | 10.0% |
| !!! | ATATAAATTTTAAATTTGGT+AGG | + | chr2_1:57333987-57334006 | Msa0213750:intron | 10.0% |
| !!! | TGTATACATTTTTAATTAAA+TGG | - | chr2_1:57334095-57334114 | None:intergenic | 10.0% |
| !!! | ATTGAAAAAGTTTTAAATTA+TGG | - | chr2_1:57335540-57335559 | None:intergenic | 10.0% |
| !! | TTATTTGACATATTAAAATA+GGG | + | chr2_1:57335582-57335601 | Msa0213750:intron | 10.0% |
| !!! | TCTTTTTAGAAAAGAAAAAA+AGG | - | chr2_1:57327370-57327389 | None:intergenic | 15.0% |
| !! | CAAATGCTATAAAAATAATA+TGG | - | chr2_1:57327528-57327547 | None:intergenic | 15.0% |
| !!! | TCATTTTATTTTATAGTTCA+TGG | + | chr2_1:57327662-57327681 | Msa0213750:intron | 15.0% |
| !!! | TTTTTTCTTATGTTTAAGAT+CGG | - | chr2_1:57329134-57329153 | None:intergenic | 15.0% |
| !! | TTTCTTATAATAATAATTGG+AGG | - | chr2_1:57329264-57329283 | None:intergenic | 15.0% |
| !! | AATTTGATCTCATTAAAAAT+AGG | + | chr2_1:57329617-57329636 | Msa0213750:intron | 15.0% |
| !!! | TAACATTTCTCTAATTTTAT+TGG | - | chr2_1:57329714-57329733 | None:intergenic | 15.0% |
| !! | TATAAGTACATATATTTCAA+TGG | - | chr2_1:57329972-57329991 | None:intergenic | 15.0% |
| !!! | CTTCATTTGTTTAAAATAAA+TGG | - | chr2_1:57330178-57330197 | None:intergenic | 15.0% |
| !!! | TAAAAATTTTGAATTGTTGA+TGG | + | chr2_1:57330358-57330377 | Msa0213750:intron | 15.0% |
| !!! | AAAAATTTTGAATTGTTGAT+GGG | + | chr2_1:57330359-57330378 | Msa0213750:intron | 15.0% |
| !! | TAATTCACAAAAAAGTTATA+TGG | - | chr2_1:57331101-57331120 | None:intergenic | 15.0% |
| !! | AAAATTATTTATATAGCAAG+GGG | - | chr2_1:57331246-57331265 | None:intergenic | 15.0% |
| !!! | ATTTATTTTTTGTGAAAAGA+TGG | + | chr2_1:57331292-57331311 | Msa0213750:intron | 15.0% |
| !!! | TTTATTTTTTGTGAAAAGAT+GGG | + | chr2_1:57331293-57331312 | Msa0213750:intron | 15.0% |
| !! | TAAAAATTGACAATTGATAA+TGG | - | chr2_1:57331405-57331424 | None:intergenic | 15.0% |
| !! | TATTAATTCTACACTAATTT+AGG | + | chr2_1:57331434-57331453 | Msa0213750:intron | 15.0% |
| !!! | ATATTTGGTTTCAAATAATA+TGG | - | chr2_1:57331508-57331527 | None:intergenic | 15.0% |
| !!! | TAAGTAATTTAAGTGTTATT+TGG | + | chr2_1:57333905-57333924 | Msa0213750:intron | 15.0% |
| !!! | TGTTATAAGTTATTTTTGTA+AGG | + | chr2_1:57334182-57334201 | Msa0213750:intron | 15.0% |
| !!! | TTTTCAAATATGATTCAAAT+TGG | + | chr2_1:57334384-57334403 | Msa0213750:five_prime_UTR | 15.0% |
| !! | CAAATTGATAAAAATGTTAT+AGG | + | chr2_1:57334714-57334733 | Msa0213750:intron | 15.0% |
| !! | TATGTCAATTAAATTTAGAA+GGG | - | chr2_1:57334790-57334809 | None:intergenic | 15.0% |
| !! | TTATGTCAATTAAATTTAGA+AGG | - | chr2_1:57334791-57334810 | None:intergenic | 15.0% |
| !!! | GTAATCAGAATTTTAAATAA+CGG | - | chr2_1:57335485-57335504 | None:intergenic | 15.0% |
| !! | GTTATTTGACATATTAAAAT+AGG | + | chr2_1:57335581-57335600 | Msa0213750:intron | 15.0% |
| !!! | TTTATTTTATAGTTCATGGA+AGG | + | chr2_1:57327666-57327685 | Msa0213750:intron | 20.0% |
| !! | TATTCCAAAAGAATTCAAAT+TGG | + | chr2_1:57327877-57327896 | Msa0213750:five_prime_UTR | 20.0% |
| !!! | TATCATTTTTTTTGGTGATA+GGG | - | chr2_1:57328918-57328937 | None:intergenic | 20.0% |
| !!! | ATATCATTTTTTTTGGTGAT+AGG | - | chr2_1:57328917-57328936 | None:intergenic | 20.0% |
| !!! | ATATCATTTTTTTTGGTGAT+AGG | + | chr2_1:57328917-57328936 | Msa0213750:intron | 20.0% |
| !!! | TATCATTTTTTTTGGTGATA+GGG | + | chr2_1:57328918-57328937 | Msa0213750:intron | 20.0% |
| !! | GAAAAAAAAATTTCTGTCTT+TGG | + | chr2_1:57328945-57328964 | Msa0213750:intron | 20.0% |
| !!! | ATTAGATTCAAATTTTCGAA+CGG | + | chr2_1:57329173-57329192 | Msa0213750:intron | 20.0% |
| !! | AACATTATTAGAAATTTGTG+TGG | + | chr2_1:57329350-57329369 | Msa0213750:intron | 20.0% |
| !! | ACATTATTAGAAATTTGTGT+GGG | + | chr2_1:57329351-57329370 | Msa0213750:intron | 20.0% |
| !! | ATGCAAAAATAGAAATGAAA+AGG | - | chr2_1:57329440-57329459 | None:intergenic | 20.0% |
| !! | AAAATTAGAGAAATGTTAAC+CGG | + | chr2_1:57329716-57329735 | Msa0213750:intron | 20.0% |
| !!! | GGAAACTTTTTTTTACTTTA+TGG | - | chr2_1:57329808-57329827 | None:intergenic | 20.0% |
| !! | TGGAATATTACTATCAAAAT+TGG | + | chr2_1:57330209-57330228 | Msa0213750:intron | 20.0% |
| !! | TATTACTATCAAAATTGGTT+TGG | + | chr2_1:57330214-57330233 | Msa0213750:intron | 20.0% |
| !!! | ATTTTTTTTTTTGAGAGATC+TGG | - | chr2_1:57330544-57330563 | None:intergenic | 20.0% |
| !! | CTAAGTTCTTATATCAAATA+TGG | - | chr2_1:57330582-57330601 | None:intergenic | 20.0% |
| !! | TTTGATATAAGAACTTAGTA+AGG | + | chr2_1:57330584-57330603 | Msa0213750:intron | 20.0% |
| !! | GACAAGATTGTATTAAAAAT+TGG | - | chr2_1:57330887-57330906 | None:intergenic | 20.0% |
| !! | AAAATAAAAAAAACTCAACC+AGG | - | chr2_1:57330945-57330964 | None:intergenic | 20.0% |
| !!! | GTAACATTTTAAAATCATAG+TGG | + | chr2_1:57331018-57331037 | Msa0213750:intron | 20.0% |
| !! | TTCCAATATCAAAAAGTTTA+TGG | - | chr2_1:57331044-57331063 | None:intergenic | 20.0% |
| !! | AAAAATAAATCTTCACTGAT+TGG | - | chr2_1:57331170-57331189 | None:intergenic | 20.0% |
| !! | TTTATTTATCATATTTCCAG+TGG | + | chr2_1:57331187-57331206 | Msa0213750:intron | 20.0% |
| !!! | GTTTTATTTGCTATTGTTTT+GGG | - | chr2_1:57332164-57332183 | None:intergenic | 20.0% |
| !!! | TAAGTTATCATGTTTTGTTA+TGG | - | chr2_1:57332277-57332296 | None:intergenic | 20.0% |
| !!! | TTCTTTTCATTTATTGTTCA+AGG | + | chr2_1:57333228-57333247 | Msa0213750:intron | 20.0% |
| !!! | AAATGAAATTTGATGATGAT+TGG | + | chr2_1:57333356-57333375 | Msa0213750:intron | 20.0% |
| !!! | AATGAAATTTGATGATGATT+GGG | + | chr2_1:57333357-57333376 | Msa0213750:intron | 20.0% |
| !! | TTCCAAATTATGAACAAAAA+TGG | - | chr2_1:57333443-57333462 | None:intergenic | 20.0% |
| !! | CTTAACAATAACTGAAATTT+AGG | - | chr2_1:57333828-57333847 | None:intergenic | 20.0% |
| !! | CTTAACAAAAACTGAAATTT+AGG | - | chr2_1:57333889-57333908 | None:intergenic | 20.0% |
| !! | AATTTGTAGTCAAAACTATA+TGG | - | chr2_1:57335513-57335532 | None:intergenic | 20.0% |
| !!! | TATAGTTTTGACTACAAATT+CGG | + | chr2_1:57335513-57335532 | Msa0213750:intron | 20.0% |
| !! | TTAAACTTGAGTGTTAATAT+CGG | - | chr2_1:57335763-57335782 | None:intergenic | 20.0% |
| ! | ATGGAATTGATGTGAAAAAT+GGG | - | chr2_1:57327396-57327415 | None:intergenic | 25.0% |
| ! | AATGGAATTGATGTGAAAAA+TGG | - | chr2_1:57327397-57327416 | None:intergenic | 25.0% |
| ! | TTAAGAAATTGTTGAAAGCA+TGG | - | chr2_1:57327428-57327447 | None:intergenic | 25.0% |
| ! | ATGCTTTCAACAATTTCTTA+AGG | + | chr2_1:57327427-57327446 | Msa0213750:five_prime_UTR | 25.0% |
| ! | AACAATTTCTTAAGGTAAAG+TGG | + | chr2_1:57327435-57327454 | Msa0213750:intron | 25.0% |
| ! | AAAATGAGAAGTTAGAGTAA+TGG | - | chr2_1:57327465-57327484 | None:intergenic | 25.0% |
| ! | TGTTACTAACTTAATGTTAC+TGG | - | chr2_1:57327609-57327628 | None:intergenic | 25.0% |
| ! | TAGAAGCAAAATCTTTATCT+GGG | + | chr2_1:57327691-57327710 | Msa0213750:five_prime_UTR | 25.0% |
| !! | TCAACCAATTTGAATTCTTT+TGG | - | chr2_1:57327884-57327903 | None:intergenic | 25.0% |
| !! | TTGATTTTCAGATATACTCT+TGG | + | chr2_1:57328005-57328024 | Msa0213750:intron | 25.0% |
| !!! | ATCATTTTTTTTGGTGATAG+GGG | - | chr2_1:57328919-57328938 | None:intergenic | 25.0% |
| !!! | GGCAGATATATCATTTTTTT+TGG | - | chr2_1:57328910-57328929 | None:intergenic | 25.0% |
| !! | AGAGCAATAATTTTCAACTA+GGG | - | chr2_1:57328888-57328907 | None:intergenic | 25.0% |
| !! | TAGAGCAATAATTTTCAACT+AGG | - | chr2_1:57328887-57328906 | None:intergenic | 25.0% |
| ! | TATGCTCGTCAATTTAAATT+AGG | - | chr2_1:57328321-57328340 | None:intergenic | 25.0% |
| ! | TGACGAGCATAAATTATTTA+AGG | + | chr2_1:57328330-57328349 | Msa0213750:intron | 25.0% |
| !!! | TTCTTGTTCTCTTTTTGAAA+TGG | + | chr2_1:57328357-57328376 | Msa0213750:intron | 25.0% |
| ! | TCATCATGAAAATTTGTCAT+TGG | + | chr2_1:57328504-57328523 | Msa0213750:intron | 25.0% |
| !! | TAGAGCAATAATTTTCAACT+AGG | + | chr2_1:57328887-57328906 | Msa0213750:intron | 25.0% |
| !! | AGAGCAATAATTTTCAACTA+GGG | + | chr2_1:57328888-57328907 | Msa0213750:intron | 25.0% |
| !!! | GGCAGATATATCATTTTTTT+TGG | + | chr2_1:57328910-57328929 | Msa0213750:intron | 25.0% |
| !!! | ATCATTTTTTTTGGTGATAG+GGG | + | chr2_1:57328919-57328938 | Msa0213750:intron | 25.0% |
| ! | TTCAATGTAATTACAAGTGT+CGG | - | chr2_1:57328998-57329017 | None:intergenic | 25.0% |
| !! | TTTAAAATTATTAGCTGCGT+CGG | + | chr2_1:57329029-57329048 | Msa0213750:intron | 25.0% |
| ! | TTAAAAAAGATGGAGAAGAA+TGG | + | chr2_1:57329502-57329521 | Msa0213750:intron | 25.0% |
| ! | TAAAAAAGATGGAGAAGAAT+GGG | + | chr2_1:57329503-57329522 | Msa0213750:intron | 25.0% |
| !!! | ATGCATTTTTTCAATGACAT+GGG | - | chr2_1:57329563-57329582 | None:intergenic | 25.0% |
| !!! | AATGCATTTTTTCAATGACA+TGG | - | chr2_1:57329564-57329583 | None:intergenic | 25.0% |
| ! | AAAGGAAGTTATTACTGAAA+AGG | - | chr2_1:57329829-57329848 | None:intergenic | 25.0% |
| !!! | TCAGTAATAACTTCCTTTTT+TGG | + | chr2_1:57329831-57329850 | Msa0213750:intron | 25.0% |
| !! | ATTTTATGAGTCATGTTAAC+CGG | - | chr2_1:57329882-57329901 | None:intergenic | 25.0% |
| ! | AAAATATATAGTCCCACAAA+AGG | - | chr2_1:57330404-57330423 | None:intergenic | 25.0% |
| !! | TTTGTGGGACTATATATTTT+TGG | + | chr2_1:57330404-57330423 | Msa0213750:intron | 25.0% |
| ! | TATATCAAATATGGTGTATC+TGG | - | chr2_1:57330573-57330592 | None:intergenic | 25.0% |
| ! | AAAAATTGATGAGCTCATTA+CGG | - | chr2_1:57330690-57330709 | None:intergenic | 25.0% |
| !! | TGACAAGTTTTTAATGATCA+CGG | + | chr2_1:57330791-57330810 | Msa0213750:intron | 25.0% |
| ! | TTCACAAAAAAGTTATATGG+TGG | - | chr2_1:57331098-57331117 | None:intergenic | 25.0% |
| ! | GTTTCAAATAATATGGTGAT+TGG | - | chr2_1:57331501-57331520 | None:intergenic | 25.0% |
| ! | CAATTGTTACAAAAATACCT+TGG | - | chr2_1:57331602-57331621 | None:intergenic | 25.0% |
| ! | TTCATTGCATTTAATCTTTG+AGG | + | chr2_1:57331630-57331649 | Msa0213750:intron | 25.0% |
| !! | AATTTTTCACACTATTTGGA+AGG | - | chr2_1:57331839-57331858 | None:intergenic | 25.0% |
| !! | GAGAAATTTTTCACACTATT+TGG | - | chr2_1:57331843-57331862 | None:intergenic | 25.0% |
| ! | GTTGGAAATATAGAGAAAAA+TGG | - | chr2_1:57331867-57331886 | None:intergenic | 25.0% |
| ! | TTTAAATTTGGTAGGATCTT+AGG | - | chr2_1:57331973-57331992 | None:intergenic | 25.0% |
| ! | TACTGATAAAACAACTCTAA+CGG | + | chr2_1:57332107-57332126 | Msa0213750:intron | 25.0% |
| !! | TTTTAATGTGTGATATGCAA+CGG | - | chr2_1:57332139-57332158 | None:intergenic | 25.0% |
| !!! | GGTTTTATTTGCTATTGTTT+TGG | - | chr2_1:57332165-57332184 | None:intergenic | 25.0% |
| ! | ATATGTAGGTGAAAATGAAT+TGG | - | chr2_1:57332419-57332438 | None:intergenic | 25.0% |
| ! | AATCAAGATCAAATTGAAGA+GGG | - | chr2_1:57332498-57332517 | None:intergenic | 25.0% |
| ! | AAGATTAGCAAAAAGAGAAA+GGG | - | chr2_1:57332635-57332654 | None:intergenic | 25.0% |
| ! | GAATGATGTTATATTTGTCA+TGG | - | chr2_1:57332665-57332684 | None:intergenic | 25.0% |
| !! | GGAAAACAATTAGAGTATTT+AGG | - | chr2_1:57332971-57332990 | None:intergenic | 25.0% |
| !! | ATACTCTAATTGTTTTCCAT+TGG | + | chr2_1:57332973-57332992 | Msa0213750:intron | 25.0% |
| !! | TACTCTAATTGTTTTCCATT+GGG | + | chr2_1:57332974-57332993 | Msa0213750:intron | 25.0% |
| ! | TGTAATGACTAATTCAAGAT+TGG | + | chr2_1:57333306-57333325 | Msa0213750:intron | 25.0% |
| ! | TCATCATCAAATTTCATTTC+AGG | - | chr2_1:57333355-57333374 | None:intergenic | 25.0% |
| !!! | TGCCATTTTTGTTCATAATT+TGG | + | chr2_1:57333438-57333457 | Msa0213750:intron | 25.0% |
| !!! | TACGTTTTCATGTTTTGTTA+TGG | + | chr2_1:57333601-57333620 | Msa0213750:intron | 25.0% |
| ! | TAATTAAATGGTAGAAACCA+AGG | - | chr2_1:57334083-57334102 | None:intergenic | 25.0% |
| ! | AAAGCAACTTATAACAGAAA+TGG | - | chr2_1:57334120-57334139 | None:intergenic | 25.0% |
| ! | TAGAGTAGATTTAAGAGATT+TGG | - | chr2_1:57334284-57334303 | None:intergenic | 25.0% |
| ! | TTAAATCTACTCTATACACT+AGG | + | chr2_1:57334290-57334309 | Msa0213750:intron | 25.0% |
| ! | TGAACATTTAGATGATCATT+GGG | - | chr2_1:57334426-57334445 | None:intergenic | 25.0% |
| ! | TTGAACATTTAGATGATCAT+TGG | - | chr2_1:57334427-57334446 | None:intergenic | 25.0% |
| ! | GAAATGATTTACCTAAAACT+TGG | - | chr2_1:57334899-57334918 | None:intergenic | 25.0% |
| ! | AATTTCTTTCAAAATTGCAG+TGG | + | chr2_1:57334979-57334998 | Msa0213750:intron | 25.0% |
| ! | CGGATGATAAAAAAAAATCT+CGG | + | chr2_1:57335175-57335194 | Msa0213750:intron | 25.0% |
| ! | GTAAATATGTATGCAATGTT+TGG | - | chr2_1:57335288-57335307 | None:intergenic | 25.0% |
| ! | ATTGCATACATATTTACAAC+TGG | + | chr2_1:57335291-57335310 | Msa0213750:intron | 25.0% |
| ! | TTGCATACATATTTACAACT+GGG | + | chr2_1:57335292-57335311 | Msa0213750:intron | 25.0% |
| !! | TCGAAGTTACATTGTAATTT+TGG | - | chr2_1:57335401-57335420 | None:intergenic | 25.0% |
| !! | TGTCATCAACATTTGTTAAA+GGG | - | chr2_1:57335645-57335664 | None:intergenic | 25.0% |
| !! | TTGTCATCAACATTTGTTAA+AGG | - | chr2_1:57335646-57335665 | None:intergenic | 25.0% |
| ! | TTTCATGATCTTTAGTCATA+TGG | - | chr2_1:57335705-57335724 | None:intergenic | 25.0% |
| !! | CTTAAAACTACAGACTTTTA+TGG | - | chr2_1:57335868-57335887 | None:intergenic | 25.0% |
| !!! | CATAAAAGTCTGTAGTTTTA+AGG | + | chr2_1:57335866-57335885 | Msa0213750:exon | 25.0% |
| ! | AATTACATTCATAAGCAAGA+AGG | - | chr2_1:57335932-57335951 | None:intergenic | 25.0% |
| TAACCATATATAACGACGTT+TGG | - | chr2_1:57327218-57327237 | None:intergenic | 30.0% | |
| ! | AAGTAAAGTAGTGGAATATG+TGG | - | chr2_1:57327302-57327321 | None:intergenic | 30.0% |
| TAGCATAAGAAGTAAAGTAG+TGG | - | chr2_1:57327311-57327330 | None:intergenic | 30.0% | |
| ACTTTGTTGAAAGAATGAGA+AGG | - | chr2_1:57327345-57327364 | None:intergenic | 30.0% | |
| GCATTTGATTCCATAAAATG+TGG | + | chr2_1:57327541-57327560 | Msa0213750:intron | 30.0% | |
| ! | GATAAACTAGCCACATTTTA+TGG | - | chr2_1:57327554-57327573 | None:intergenic | 30.0% |
| GTAGAAGCAAAATCTTTATC+TGG | + | chr2_1:57327690-57327709 | Msa0213750:five_prime_UTR | 30.0% | |
| ! | TTCAAATTGGTTGAAGCTTT+TGG | + | chr2_1:57327890-57327909 | Msa0213750:five_prime_UTR | 30.0% |
| ! | TCAAATTGGTTGAAGCTTTT+GGG | + | chr2_1:57327891-57327910 | Msa0213750:five_prime_UTR | 30.0% |
| ! | ATTTTCAGATATACTCTTGG+TGG | + | chr2_1:57328008-57328027 | Msa0213750:intron | 30.0% |
| !!! | TTTCCCAATTTTTTGACTCT+TGG | + | chr2_1:57328108-57328127 | Msa0213750:intron | 30.0% |
| ACACCAAGAGTCAAAAAATT+GGG | - | chr2_1:57328114-57328133 | None:intergenic | 30.0% | |
| ! | GAGCAATAATTTTCAACTAG+GGG | - | chr2_1:57328889-57328908 | None:intergenic | 30.0% |
| GCCATTTCAAATGAAGAAAA+GGG | - | chr2_1:57328222-57328241 | None:intergenic | 30.0% | |
| !! | AGCATGCATTATTTTGTTAC+TGG | + | chr2_1:57328426-57328445 | Msa0213750:intron | 30.0% |
| !! | GCATGCATTATTTTGTTACT+GGG | + | chr2_1:57328427-57328446 | Msa0213750:intron | 30.0% |
| TGGAAATAACAAAGCTGAAA+AGG | + | chr2_1:57328480-57328499 | Msa0213750:intron | 30.0% | |
| TTCTTGCTAGTAGTTTGAAA+TGG | - | chr2_1:57328669-57328688 | None:intergenic | 30.0% | |
| ! | TTCTTGTTCTCTCTTTGAAA+TGG | - | chr2_1:57328725-57328744 | None:intergenic | 30.0% |
| CCATTTCAAATGAAGAACAA+GGG | + | chr2_1:57328860-57328879 | Msa0213750:intron | 30.0% | |
| ! | GAGCAATAATTTTCAACTAG+GGG | + | chr2_1:57328889-57328908 | Msa0213750:intron | 30.0% |
| ! | AAAATTTCTGTCTTTGGTGT+CGG | + | chr2_1:57328951-57328970 | Msa0213750:intron | 30.0% |
| ! | TTTCTTATGTTTAAGATCGG+AGG | - | chr2_1:57329131-57329150 | None:intergenic | 30.0% |
| CAAATGAAGAGATCTTTACT+TGG | + | chr2_1:57330189-57330208 | Msa0213750:intron | 30.0% | |
| !! | ATTGGTTTGGATTGATCAAT+TGG | + | chr2_1:57330227-57330246 | Msa0213750:intron | 30.0% |
| TTATATTCAAGTAGCACACA+TGG | + | chr2_1:57330328-57330347 | Msa0213750:intron | 30.0% | |
| ! | GACAAGTTTTTAATGATCAC+GGG | + | chr2_1:57330792-57330811 | Msa0213750:intron | 30.0% |
| ! | ACAAGTTTTTAATGATCACG+GGG | + | chr2_1:57330793-57330812 | Msa0213750:intron | 30.0% |
| ! | GGCCATAAACTTTTTGATAT+TGG | + | chr2_1:57331039-57331058 | Msa0213750:intron | 30.0% |
| ATTTATCATATTTCCAGTGG+CGG | + | chr2_1:57331190-57331209 | Msa0213750:intron | 30.0% | |
| !! | GACAATTGATAATGGTTGTT+TGG | - | chr2_1:57331397-57331416 | None:intergenic | 30.0% |
| TCTACACTAATTTAGGTAAC+TGG | + | chr2_1:57331441-57331460 | Msa0213750:intron | 30.0% | |
| TTGAAACCAAATATTTGTGC+TGG | + | chr2_1:57331514-57331533 | Msa0213750:intron | 30.0% | |
| TGAAACCAAATATTTGTGCT+GGG | + | chr2_1:57331515-57331534 | Msa0213750:intron | 30.0% | |
| !!! | TAACTAGCATTTTTTCGTAC+AGG | + | chr2_1:57331543-57331562 | Msa0213750:intron | 30.0% |
| !! | CAGAGTTTTTAGATGTTTGT+AGG | - | chr2_1:57332186-57332205 | None:intergenic | 30.0% |
| CTACAAACATCTAAAAACTC+TGG | + | chr2_1:57332184-57332203 | Msa0213750:intron | 30.0% | |
| TGTCATTCTCGTTCATAATT+TGG | - | chr2_1:57332469-57332488 | None:intergenic | 30.0% | |
| GAATCAAGATCAAATTGAAG+AGG | - | chr2_1:57332499-57332518 | None:intergenic | 30.0% | |
| !!! | TTTTGATGATGATTGGGTTA+TGG | - | chr2_1:57332577-57332596 | None:intergenic | 30.0% |
| CAAGATTAGCAAAAAGAGAA+AGG | - | chr2_1:57332636-57332655 | None:intergenic | 30.0% | |
| AAAAATCTACACCGAAAGAT+TGG | - | chr2_1:57332922-57332941 | None:intergenic | 30.0% | |
| ! | AGATTTTTCACGCATTAGTT+TGG | + | chr2_1:57332934-57332953 | Msa0213750:intron | 30.0% |
| !!! | CGATTTTTCAAGTGTTAGTT+TGG | - | chr2_1:57333021-57333040 | None:intergenic | 30.0% |
| AACACTTGAAAAATCGACAT+CGG | + | chr2_1:57333025-57333044 | Msa0213750:intron | 30.0% | |
| TCAAGGTTCATACAAAAAGA+AGG | + | chr2_1:57333245-57333264 | Msa0213750:intron | 30.0% | |
| GTTCATACAAAAAGAAGGAA+CGG | + | chr2_1:57333250-57333269 | Msa0213750:intron | 30.0% | |
| TACAAATACAACGTCATTCA+TGG | - | chr2_1:57333290-57333309 | None:intergenic | 30.0% | |
| ! | CAAGATTGGCTAAAAAAGAA+AGG | + | chr2_1:57333320-57333339 | Msa0213750:intron | 30.0% |
| !! | ATTTGATGATGATTGGGTTA+TGG | + | chr2_1:57333363-57333382 | Msa0213750:intron | 30.0% |
| !! | TTTGATGATGATTGGGTTAT+GGG | + | chr2_1:57333364-57333383 | Msa0213750:intron | 30.0% |
| AATTCTGAATGAAGACTTTG+AGG | + | chr2_1:57333414-57333433 | Msa0213750:intron | 30.0% | |
| AATTTGGAAGATGAACATGA+TGG | + | chr2_1:57333454-57333473 | Msa0213750:intron | 30.0% | |
| ATATGTAGGCAAAGATGAAA+TGG | + | chr2_1:57333489-57333508 | Msa0213750:intron | 30.0% | |
| !! | GTTTTGTTATGGAGTTGTTT+CGG | + | chr2_1:57333612-57333631 | Msa0213750:intron | 30.0% |
| ! | TTCTGTTATAAGTTGCTTTG+AGG | + | chr2_1:57334121-57334140 | Msa0213750:intron | 30.0% |
| ! | TTCTTGTCTTATAAGGTGTT+TGG | - | chr2_1:57334256-57334275 | None:intergenic | 30.0% |
| ! | GGACATTTTCTTGTCTTATA+AGG | - | chr2_1:57334263-57334282 | None:intergenic | 30.0% |
| CTTGTGAGACTTATATTACA+AGG | - | chr2_1:57334483-57334502 | None:intergenic | 30.0% | |
| AATATAAGTCTCACAAGTGT+TGG | + | chr2_1:57334486-57334505 | Msa0213750:five_prime_UTR | 30.0% | |
| TTGGTGAGTGAAATTTGATT+TGG | + | chr2_1:57334505-57334524 | Msa0213750:intron | 30.0% | |
| GATGATACATCATACATCTT+TGG | + | chr2_1:57334527-57334546 | Msa0213750:intron | 30.0% | |
| ! | CTTATTTCACACCTTTGTTT+CGG | + | chr2_1:57334600-57334619 | Msa0213750:intron | 30.0% |
| ! | TTCAGTGTTATTGTAAGTAG+GGG | - | chr2_1:57335065-57335084 | None:intergenic | 30.0% |
| ! | GTTCAGTGTTATTGTAAGTA+GGG | - | chr2_1:57335066-57335085 | None:intergenic | 30.0% |
| TTACAATGTAACTTCGATTG+AGG | + | chr2_1:57335404-57335423 | Msa0213750:intron | 30.0% | |
| TTGTAGTCAAAACTATATGG+TGG | - | chr2_1:57335510-57335529 | None:intergenic | 30.0% | |
| AATGATCTTGAAACCTTCAA+AGG | - | chr2_1:57335622-57335641 | None:intergenic | 30.0% | |
| CAAACTTTACAAGACTATGA+AGG | + | chr2_1:57335673-57335692 | Msa0213750:CDS | 30.0% | |
| GTGGAATATGTGGAAATGAA+TGG | - | chr2_1:57327292-57327311 | None:intergenic | 35.0% | |
| ! | GAAAGCATGGTGTATAAGAA+TGG | - | chr2_1:57327415-57327434 | None:intergenic | 35.0% |
| GCAAAATCTTTATCTGGGTA+TGG | + | chr2_1:57327696-57327715 | Msa0213750:five_prime_UTR | 35.0% | |
| TACCTTCCTCTAAATATCCA+TGG | - | chr2_1:57327729-57327748 | None:intergenic | 35.0% | |
| AGTTATGATGATAGTCCAGT+CGG | + | chr2_1:57328044-57328063 | Msa0213750:five_prime_UTR | 35.0% | |
| CAAAAACAGAACCTCATCAA+AGG | - | chr2_1:57328072-57328091 | None:intergenic | 35.0% | |
| CACACCAAGAGTCAAAAAAT+TGG | - | chr2_1:57328115-57328134 | None:intergenic | 35.0% | |
| ! | GCCCTTTTCTTCATTTGAAA+TGG | + | chr2_1:57328218-57328237 | Msa0213750:intron | 35.0% |
| CGCCATTTCAAATGAAGAAA+AGG | - | chr2_1:57328223-57328242 | None:intergenic | 35.0% | |
| ! | CCATTTTATATGTGGAGCAT+GGG | - | chr2_1:57328404-57328423 | None:intergenic | 35.0% |
| CATGAAAATTTGTCATTGGC+TGG | + | chr2_1:57328508-57328527 | Msa0213750:intron | 35.0% | |
| ! | TTGTGCTGATATTCTTGCTT+TGG | + | chr2_1:57328603-57328622 | Msa0213750:intron | 35.0% |
| TGGCGAGCATGAATTATTTA+AGG | - | chr2_1:57328752-57328771 | None:intergenic | 35.0% | |
| TGCGTGTTCCTAATTTAAGT+TGG | - | chr2_1:57328772-57328791 | None:intergenic | 35.0% | |
| GCCATTTCAAATGAAGAACA+AGG | + | chr2_1:57328859-57328878 | Msa0213750:intron | 35.0% | |
| CCCTTGTTCTTCATTTGAAA+TGG | - | chr2_1:57328863-57328882 | None:intergenic | 35.0% | |
| AACTCTATGAAGCACGAATA+CGG | - | chr2_1:57329091-57329110 | None:intergenic | 35.0% | |
| !! | TTTTTCAATGACATGGGAAC+TGG | - | chr2_1:57329557-57329576 | None:intergenic | 35.0% |
| !! | CTGAAGAGAGTATCTTTCAA+TGG | - | chr2_1:57330002-57330021 | None:intergenic | 35.0% |
| TCTCTTAAAACAAAGACGAG+AGG | + | chr2_1:57330135-57330154 | Msa0213750:intron | 35.0% | |
| TGTTATCCACTATGTAGACT+TGG | - | chr2_1:57330263-57330282 | None:intergenic | 35.0% | |
| !! | TGAAGCATTGGAACTTGAAT+GGG | - | chr2_1:57330294-57330313 | None:intergenic | 35.0% |
| TTGTAACACTAGTGAAGCAT+TGG | - | chr2_1:57330306-57330325 | None:intergenic | 35.0% | |
| !! | TCAGATACATTGATTCTACC+TGG | + | chr2_1:57330911-57330930 | Msa0213750:intron | 35.0% |
| GTTCATCTCATGCAATGATT+TGG | - | chr2_1:57331143-57331162 | None:intergenic | 35.0% | |
| ! | TAAATCTTCACTGATTGGAG+TGG | - | chr2_1:57331165-57331184 | None:intergenic | 35.0% |
| !!! | CATTTTTTCGTACAGGATGT+GGG | + | chr2_1:57331550-57331569 | Msa0213750:intron | 35.0% |
| !!! | ATTTTTTCGTACAGGATGTG+GGG | + | chr2_1:57331551-57331570 | Msa0213750:intron | 35.0% |
| GGGATCAGTAGATTGTAATA+CGG | + | chr2_1:57331945-57331964 | Msa0213750:intron | 35.0% | |
| !! | AAGTGTTTGTTTTCCTGTTC+TGG | - | chr2_1:57332223-57332242 | None:intergenic | 35.0% |
| AGAAGGTCATAAGCACTTAA+GGG | + | chr2_1:57332334-57332353 | Msa0213750:intron | 35.0% | |
| AATGGAGAAGACAATGAAGA+TGG | - | chr2_1:57332373-57332392 | None:intergenic | 35.0% | |
| GAGAGTGAAGATGAAGATAA+TGG | - | chr2_1:57332391-57332410 | None:intergenic | 35.0% | |
| AATTTGGAAGATGAACACGA+TGG | - | chr2_1:57332453-57332472 | None:intergenic | 35.0% | |
| ! | ATGGATGAAAGTGCAAAAGA+TGG | - | chr2_1:57332558-57332577 | None:intergenic | 35.0% |
| !!! | CCATGGTTTTGATGATGATT+GGG | - | chr2_1:57332583-57332602 | None:intergenic | 35.0% |
| !!! | ACCATGGTTTTGATGATGAT+TGG | - | chr2_1:57332584-57332603 | None:intergenic | 35.0% |
| !!! | GTTTTCCATTGGGAGTATTT+TGG | + | chr2_1:57332984-57333003 | Msa0213750:intron | 35.0% |
| ATGCAGATATGGAAAACCTT+TGG | - | chr2_1:57333091-57333110 | None:intergenic | 35.0% | |
| CTTCAAGGTGTGAATGAAAT+TGG | + | chr2_1:57333131-57333150 | Msa0213750:intron | 35.0% | |
| ATGAAATTGGAGCGCATTTA+AGG | + | chr2_1:57333144-57333163 | Msa0213750:intron | 35.0% | |
| ATGGGTGAGAATGTAGAAAA+TGG | + | chr2_1:57333382-57333401 | Msa0213750:intron | 35.0% | |
| AGAAGGTCATAATCACTCAA+GGG | - | chr2_1:57333544-57333563 | None:intergenic | 35.0% | |
| TTAGATGATCATTGGGATTG+CGG | - | chr2_1:57334419-57334438 | None:intergenic | 35.0% | |
| ! | TGCATCGAGAGATTTGATTT+CGG | - | chr2_1:57334454-57334473 | None:intergenic | 35.0% |
| AACTAAACCAGAAGAGACAA+TGG | - | chr2_1:57334567-57334586 | None:intergenic | 35.0% | |
| TAGTGTGAAAACCGAAACAA+AGG | - | chr2_1:57334614-57334633 | None:intergenic | 35.0% | |
| !! | AAATGTCGCTTCCAAGTTTT+AGG | + | chr2_1:57334885-57334904 | Msa0213750:CDS | 35.0% |
| TTCTTTCAAAATTGCAGTGG+TGG | + | chr2_1:57334982-57335001 | Msa0213750:intron | 35.0% | |
| ! | GGTTCAGTGTTATTGTAAGT+AGG | - | chr2_1:57335067-57335086 | None:intergenic | 35.0% |
| ACGCAATCCAAATTCATCAT+CGG | - | chr2_1:57335088-57335107 | None:intergenic | 35.0% | |
| !! | AAAATCTCGGTGTTGAAATC+TGG | + | chr2_1:57335188-57335207 | Msa0213750:intron | 35.0% |
| AGTGTTAGATCAAGATCAGA+CGG | - | chr2_1:57335215-57335234 | None:intergenic | 35.0% | |
| TGATCTAACACTCACTAATG+TGG | + | chr2_1:57335223-57335242 | Msa0213750:intron | 35.0% | |
| CATACATATTTACAACTGGG+CGG | + | chr2_1:57335295-57335314 | Msa0213750:intron | 35.0% | |
| TAGAGAATCGTGATCAAATG+CGG | - | chr2_1:57335439-57335458 | None:intergenic | 35.0% | |
| !! | GAGCACTGATAAAGAACAAT+AGG | - | chr2_1:57335811-57335830 | None:intergenic | 35.0% |
| ! | CTACAGACTTTTATGGAACA+GGG | - | chr2_1:57335861-57335880 | None:intergenic | 35.0% |
| ! | ACTACAGACTTTTATGGAAC+AGG | - | chr2_1:57335862-57335881 | None:intergenic | 35.0% |
| AAGCCTCCATGGATATTTAG+AGG | + | chr2_1:57327720-57327739 | Msa0213750:five_prime_UTR | 40.0% | |
| CTTCCTCTAAATATCCATGG+AGG | - | chr2_1:57327726-57327745 | None:intergenic | 40.0% | |
| CTCCATGGATATTTAGAGGA+AGG | + | chr2_1:57327724-57327743 | Msa0213750:five_prime_UTR | 40.0% | |
| !! | CACAAGATGGAGTTGATACA+AGG | - | chr2_1:57327834-57327853 | None:intergenic | 40.0% |
| CTTTCTCTGCTTTCACAAGA+TGG | - | chr2_1:57327847-57327866 | None:intergenic | 40.0% | |
| !! | TTTTGACTCTTGGTGTGTCT+TGG | + | chr2_1:57328118-57328137 | Msa0213750:intron | 40.0% |
| CCCATGCTCCACATATAAAA+TGG | + | chr2_1:57328401-57328420 | Msa0213750:intron | 40.0% | |
| !! | GCCATTTTATATGTGGAGCA+TGG | - | chr2_1:57328405-57328424 | None:intergenic | 40.0% |
| !! | CATGCTCGCCATTTTATATG+TGG | - | chr2_1:57328412-57328431 | None:intergenic | 40.0% |
| !!! | TCAGTTTTGGTTGCATCAAG+TGG | + | chr2_1:57328460-57328479 | Msa0213750:intron | 40.0% |
| ! | AATTTGTCATTGGCTGGTGA+TGG | + | chr2_1:57328514-57328533 | Msa0213750:intron | 40.0% |
| !! | GAAACTTTGTTTCTGCACTG+TGG | - | chr2_1:57328583-57328602 | None:intergenic | 40.0% |
| ! | GTTTGAAATGGCGAGCAATT+TGG | - | chr2_1:57328657-57328676 | None:intergenic | 40.0% |
| CATGCTCGCCAACTTAAATT+AGG | + | chr2_1:57328761-57328780 | Msa0213750:intron | 40.0% | |
| !!! | TTTTTTTTGGTGATAGGGGC+AGG | + | chr2_1:57328923-57328942 | Msa0213750:intron | 40.0% |
| !! | ATGGAGAAGAATGGGCTAAA+TGG | + | chr2_1:57329511-57329530 | Msa0213750:intron | 40.0% |
| !! | TGGAGAAGAATGGGCTAAAT+GGG | + | chr2_1:57329512-57329531 | Msa0213750:intron | 40.0% |
| AATGGGATTGTGATGCAAGA+TGG | + | chr2_1:57329529-57329548 | Msa0213750:intron | 40.0% | |
| GAAATGTTAACCGGTGTCTA+CGG | + | chr2_1:57329725-57329744 | Msa0213750:intron | 40.0% | |
| AAATGTTAACCGGTGTCTAC+GGG | + | chr2_1:57329726-57329745 | Msa0213750:intron | 40.0% | |
| CTGGTTAAGGCTACCAAAAA+AGG | - | chr2_1:57329847-57329866 | None:intergenic | 40.0% | |
| TATCCACTATGTAGACTTGG+TGG | - | chr2_1:57330260-57330279 | None:intergenic | 40.0% | |
| !! | GTGAAGCATTGGAACTTGAA+TGG | - | chr2_1:57330295-57330314 | None:intergenic | 40.0% |
| ! | AGATTCATGCATGCCTTTTG+TGG | + | chr2_1:57330388-57330407 | Msa0213750:intron | 40.0% |
| ! | GATTCATGCATGCCTTTTGT+GGG | + | chr2_1:57330389-57330408 | Msa0213750:intron | 40.0% |
| AAAAACTCAACCAGGTGCAA+TGG | - | chr2_1:57330937-57330956 | None:intergenic | 40.0% | |
| TTGTGAAAAGATGGGCAACA+AGG | + | chr2_1:57331301-57331320 | Msa0213750:intron | 40.0% | |
| TGTGAAAAGATGGGCAACAA+GGG | + | chr2_1:57331302-57331321 | Msa0213750:intron | 40.0% | |
| !!! | GCATTTTTTCGTACAGGATG+TGG | + | chr2_1:57331549-57331568 | Msa0213750:intron | 40.0% |
| GAAAATCTAGCCACTTGACT+TGG | - | chr2_1:57331580-57331599 | None:intergenic | 40.0% | |
| ! | TCAAGTGGCTAGATTTTCCA+AGG | + | chr2_1:57331582-57331601 | Msa0213750:five_prime_UTR | 40.0% |
| ! | CTTTGTTTGCGAGTTTAGAG+AGG | + | chr2_1:57331671-57331690 | Msa0213750:intron | 40.0% |
| TTTGCGAGTTTAGAGAGGAA+GGG | + | chr2_1:57331676-57331695 | Msa0213750:intron | 40.0% | |
| ! | TGTTTTCCTGTTCTGGTCTA+CGG | - | chr2_1:57332216-57332235 | None:intergenic | 40.0% |
| GATTCACAAACAGTTCGTGT+TGG | + | chr2_1:57332311-57332330 | Msa0213750:intron | 40.0% | |
| GAGAAGGTCATAAGCACTTA+AGG | + | chr2_1:57332333-57332352 | Msa0213750:intron | 40.0% | |
| ! | GATGAAAGTGCAAAAGATGG+CGG | - | chr2_1:57332555-57332574 | None:intergenic | 40.0% |
| CCCAATCATCATCAAAACCA+TGG | + | chr2_1:57332580-57332599 | Msa0213750:intron | 40.0% | |
| AAATTGGAGCGCATTTGAGA+TGG | - | chr2_1:57332810-57332829 | None:intergenic | 40.0% | |
| TGTCAAGCTTAGTATGCAGA+TGG | + | chr2_1:57332853-57332872 | Msa0213750:intron | 40.0% | |
| CTTTGGATACTCAAACCCAA+CGG | + | chr2_1:57332889-57332908 | Msa0213750:intron | 40.0% | |
| TTTGGATACTCAAACCCAAC+GGG | + | chr2_1:57332890-57332909 | Msa0213750:intron | 40.0% | |
| ATCTACACCGAAAGATTGGT+GGG | - | chr2_1:57332918-57332937 | None:intergenic | 40.0% | |
| AATCTACACCGAAAGATTGG+TGG | - | chr2_1:57332919-57332938 | None:intergenic | 40.0% | |
| TTGTGCCAAAATACTCCCAA+TGG | - | chr2_1:57332992-57333011 | None:intergenic | 40.0% | |
| TTGAGTATCCAGAGTTCCAA+AGG | + | chr2_1:57333072-57333091 | Msa0213750:intron | 40.0% | |
| !! | ATGGAAAACCTTTGGAACTC+TGG | - | chr2_1:57333083-57333102 | None:intergenic | 40.0% |
| AAATTGGAGCGCATTTAAGG+TGG | + | chr2_1:57333147-57333166 | Msa0213750:intron | 40.0% | |
| GGTGAGAATGTAGAAAATGG+AGG | + | chr2_1:57333385-57333404 | Msa0213750:intron | 40.0% | |
| TTGGAAGATGAACATGATGG+AGG | + | chr2_1:57333457-57333476 | Msa0213750:intron | 40.0% | |
| GGCAAAGATGAAATGGAAGA+TGG | + | chr2_1:57333496-57333515 | Msa0213750:intron | 40.0% | |
| GAAATGGAAGATGGAGAAGA+TGG | + | chr2_1:57333505-57333524 | Msa0213750:intron | 40.0% | |
| GAGAAGGTCATAATCACTCA+AGG | - | chr2_1:57333545-57333564 | None:intergenic | 40.0% | |
| ! | TTCTCCAACATGAAGCGTTA+GGG | + | chr2_1:57333560-57333579 | Msa0213750:intron | 40.0% |
| AATTCCCTAACGCTTCATGT+TGG | - | chr2_1:57333567-57333586 | None:intergenic | 40.0% | |
| TAGAGAGATAGAGAGAGAGA+GGG | - | chr2_1:57333740-57333759 | None:intergenic | 40.0% | |
| ATAGAGAGATAGAGAGAGAG+AGG | - | chr2_1:57333741-57333760 | None:intergenic | 40.0% | |
| TCTCTCTCTCTATCTCTCTA+TGG | + | chr2_1:57333740-57333759 | Msa0213750:intron | 40.0% | |
| TCAAGATCCTAGGCAAGATT+GGG | - | chr2_1:57334051-57334070 | None:intergenic | 40.0% | |
| ATGGTAGAAACCAAGGTAGT+CGG | - | chr2_1:57334076-57334095 | None:intergenic | 40.0% | |
| !! | CGCTTTTTAATTCCGCAAAG+GGG | - | chr2_1:57334666-57334685 | None:intergenic | 40.0% |
| !! | GCGCTTTTTAATTCCGCAAA+GGG | - | chr2_1:57334667-57334686 | None:intergenic | 40.0% |
| CTCCGCATCTTACAAAAACA+GGG | - | chr2_1:57334689-57334708 | None:intergenic | 40.0% | |
| TCTCCGCATCTTACAAAAAC+AGG | - | chr2_1:57334690-57334709 | None:intergenic | 40.0% | |
| !! | GGAAGCGACATTTTAATCGT+TGG | - | chr2_1:57334878-57334897 | None:intergenic | 40.0% |
| !! | CAAGAGTACTTAAGGAGGTT+AGG | - | chr2_1:57335021-57335040 | None:intergenic | 40.0% |
| !! | CAATCTGGCAAGAGTACTTA+AGG | - | chr2_1:57335029-57335048 | None:intergenic | 40.0% |
| CACTGAACCGATGATGAATT+TGG | + | chr2_1:57335078-57335097 | Msa0213750:intron | 40.0% | |
| CGGTTTCGATAACATCACAT+AGG | - | chr2_1:57335743-57335762 | None:intergenic | 40.0% | |
| GCGCCAAACGTCGTTATATA+TGG | + | chr2_1:57327212-57327231 | Msa0213750:five_prime_UTR | 45.0% | |
| !!! | ATCCACTGTGTCGTTTTGTG+TGG | - | chr2_1:57327252-57327271 | None:intergenic | 45.0% |
| ! | GGGTTGTGATGCTTCAGTTT+TGG | + | chr2_1:57328447-57328466 | Msa0213750:intron | 45.0% |
| ATGAAGCACGAATACGGACA+CGG | - | chr2_1:57329085-57329104 | None:intergenic | 45.0% | |
| !! | TAGCAGCTTGTTGTGATTGC+AGG | + | chr2_1:57329374-57329393 | Msa0213750:intron | 45.0% |
| !! | TTGTGATTGCAGGACTGGTT+TGG | + | chr2_1:57329384-57329403 | Msa0213750:five_prime_UTR | 45.0% |
| GAACATACGCGCATGATGTT+GGG | - | chr2_1:57329415-57329434 | None:intergenic | 45.0% | |
| AGAACATACGCGCATGATGT+TGG | - | chr2_1:57329416-57329435 | None:intergenic | 45.0% | |
| GTTCCACCAAGTCTACATAG+TGG | + | chr2_1:57330254-57330273 | Msa0213750:intron | 45.0% | |
| GATGAGCTCATTACGGATCT+AGG | - | chr2_1:57330683-57330702 | None:intergenic | 45.0% | |
| TTTCAAATTGTAGCCGCCAC+TGG | - | chr2_1:57331206-57331225 | None:intergenic | 45.0% | |
| CAGCACCCAGCACAAATATT+TGG | - | chr2_1:57331523-57331542 | None:intergenic | 45.0% | |
| GTTTGCGAGTTTAGAGAGGA+AGG | + | chr2_1:57331675-57331694 | Msa0213750:intron | 45.0% | |
| GTAGTGAGAGTCGAGATCTT+AGG | + | chr2_1:57331910-57331929 | Msa0213750:intron | 45.0% | |
| CAAACAGTTCGTGTTGGAGA+AGG | + | chr2_1:57332317-57332336 | Msa0213750:intron | 45.0% | |
| GGAGAAGACAATGAAGATGG+AGG | - | chr2_1:57332370-57332389 | None:intergenic | 45.0% | |
| TGGAGGCAAGACGAATATGT+AGG | - | chr2_1:57332433-57332452 | None:intergenic | 45.0% | |
| TTGGAAGATGAACACGATGG+AGG | - | chr2_1:57332450-57332469 | None:intergenic | 45.0% | |
| AGATCAAATTGAAGAGGGCG+AGG | - | chr2_1:57332493-57332512 | None:intergenic | 45.0% | |
| !! | AGATGGCGGCACTGAAATTT+TGG | - | chr2_1:57332541-57332560 | None:intergenic | 45.0% |
| GAAATGGAGTTTGACGACCA+TGG | - | chr2_1:57332600-57332619 | None:intergenic | 45.0% | |
| TGGTCGTCAAACTCCATTTC+AGG | + | chr2_1:57332600-57332619 | Msa0213750:intron | 45.0% | |
| AGGGAGAAGAACACCTGAAA+TGG | - | chr2_1:57332616-57332635 | None:intergenic | 45.0% | |
| ! | CCTAAGGGTGTGAACGAAAT+TGG | - | chr2_1:57332826-57332845 | None:intergenic | 45.0% |
| CCAATTTCGTTCACACCCTT+AGG | + | chr2_1:57332823-57332842 | Msa0213750:intron | 45.0% | |
| GCTTGACATGCAGTTCCTAA+GGG | - | chr2_1:57332841-57332860 | None:intergenic | 45.0% | |
| AGCTTGACATGCAGTTCCTA+AGG | - | chr2_1:57332842-57332861 | None:intergenic | 45.0% | |
| GTATGCAGATGGAAAACCTC+TGG | + | chr2_1:57332864-57332883 | Msa0213750:intron | 45.0% | |
| !! | ATGGAAAACCTCTGGAGCTT+TGG | + | chr2_1:57332872-57332891 | Msa0213750:intron | 45.0% |
| TTGAGTATCCAAAGCTCCAG+AGG | - | chr2_1:57332883-57332902 | None:intergenic | 45.0% | |
| AAAAATCGACATCGGCCGAT+TGG | + | chr2_1:57333033-57333052 | Msa0213750:intron | 45.0% | |
| CCCAACGAAATTCCACCAAT+CGG | - | chr2_1:57333051-57333070 | None:intergenic | 45.0% | |
| CCGATTGGTGGAATTTCGTT+GGG | + | chr2_1:57333048-57333067 | Msa0213750:intron | 45.0% | |
| TCGAGCTTAGGATGCAGATA+TGG | - | chr2_1:57333102-57333121 | None:intergenic | 45.0% | |
| AAGAACTGCATGTCGAGCTT+AGG | - | chr2_1:57333114-57333133 | None:intergenic | 45.0% | |
| GGAGGCAGAGATGAATATGT+AGG | + | chr2_1:57333475-57333494 | Msa0213750:intron | 45.0% | |
| ATGGAAGATGGAGAAGATGG+AGG | + | chr2_1:57333508-57333527 | Msa0213750:intron | 45.0% | |
| CTAACGCTTCATGTTGGAGA+AGG | - | chr2_1:57333561-57333580 | None:intergenic | 45.0% | |
| ! | CTTCTCCAACATGAAGCGTT+AGG | + | chr2_1:57333559-57333578 | Msa0213750:intron | 45.0% |
| GTCACTAGATCGTGAATCAG+AGG | - | chr2_1:57334023-57334042 | None:intergenic | 45.0% | |
| CAAGATCCTAGGCAAGATTG+GGG | - | chr2_1:57334050-57334069 | None:intergenic | 45.0% | |
| GTCAAGATCCTAGGCAAGAT+TGG | - | chr2_1:57334052-57334071 | None:intergenic | 45.0% | |
| TGGTAGAAACCAAGGTAGTC+GGG | - | chr2_1:57334075-57334094 | None:intergenic | 45.0% | |
| GCAGTCTCAAGACAATCAAG+AGG | + | chr2_1:57334351-57334370 | Msa0213750:five_prime_UTR | 45.0% | |
| TCTCAAGACAATCAAGAGGC+AGG | + | chr2_1:57334355-57334374 | Msa0213750:five_prime_UTR | 45.0% | |
| ATCATTGGGATTGCGGAACT+CGG | - | chr2_1:57334412-57334431 | None:intergenic | 45.0% | |
| GCTTATGCCATTGTCTCTTC+TGG | + | chr2_1:57334557-57334576 | Msa0213750:intron | 45.0% | |
| AAGATGCTTTAGCCCCTTTG+CGG | + | chr2_1:57334651-57334670 | Msa0213750:intron | 45.0% | |
| !! | GGCGCTTTTTAATTCCGCAA+AGG | - | chr2_1:57334668-57334687 | None:intergenic | 45.0% |
| !!! | CGCCCTGTTTTTGTAAGATG+CGG | + | chr2_1:57334684-57334703 | Msa0213750:intron | 45.0% |
| ! | TTTGAGGTTTGACCGTTGGA+TGG | + | chr2_1:57334850-57334869 | Msa0213750:CDS | 45.0% |
| TTGAGGTTTGACCGTTGGAT+GGG | + | chr2_1:57334851-57334870 | Msa0213750:CDS | 45.0% | |
| !! | TCTGGCAAGAGTACTTAAGG+AGG | - | chr2_1:57335026-57335045 | None:intergenic | 45.0% |
| ACTCTTGCCAGATTGAATGC+AGG | + | chr2_1:57335034-57335053 | Msa0213750:CDS | 45.0% | |
| TGCCAGATTGAATGCAGGTT+TGG | + | chr2_1:57335039-57335058 | Msa0213750:intron | 45.0% | |
| GGCTGACTGCTTGAATTCAT+AGG | - | chr2_1:57335122-57335141 | None:intergenic | 45.0% | |
| ATTCAAGCAGTCAGCCACAT+CGG | + | chr2_1:57335126-57335145 | Msa0213750:intron | 45.0% | |
| ACTGGCGGTTGGATCAAAAT+CGG | + | chr2_1:57335155-57335174 | Msa0213750:intron | 45.0% | |
| !! | CACAGGTCAGAAAGTTTTGG+AGG | - | chr2_1:57335352-57335371 | None:intergenic | 45.0% |
| ! | CGACACAGGTCAGAAAGTTT+TGG | - | chr2_1:57335355-57335374 | None:intergenic | 45.0% |
| AAACTTTCTGACCTGTGTCG+CGG | + | chr2_1:57335355-57335374 | Msa0213750:intron | 45.0% | |
| AACTTCGATTGAGGCCACAT+TGG | + | chr2_1:57335413-57335432 | Msa0213750:intron | 45.0% | |
| AACGGTCATGTGACAATCCA+TGG | - | chr2_1:57335467-57335486 | None:intergenic | 45.0% | |
| !!! | ATTTTTCTTATAATAATAAT+TGG | - | chr2_1:57329267-57329286 | None:intergenic | 5.0% |
| !! | AATTTAATAATTAAAAAAGA+TGG | + | chr2_1:57329492-57329511 | Msa0213750:intron | 5.0% |
| !!! | TATTTAATAATATATTTTGA+TGG | - | chr2_1:57329916-57329935 | None:intergenic | 5.0% |
| !! | TATATTATTAAATAGAATAA+TGG | + | chr2_1:57329922-57329941 | Msa0213750:intron | 5.0% |
| !!! | GTTTTTTTTATTTTTTATTT+TGG | + | chr2_1:57330951-57330970 | Msa0213750:intron | 5.0% |
| !!! | CAATATATAAATTTTAAATT+TGG | + | chr2_1:57333983-57334002 | Msa0213750:intron | 5.0% |
| ATATAACGACGTTTGGCGCG+CGG | - | chr2_1:57327211-57327230 | None:intergenic | 50.0% | |
| GTCCACACAAAACGACACAG+TGG | + | chr2_1:57327247-57327266 | Msa0213750:five_prime_UTR | 50.0% | |
| ! | TGACTCTTGGTGTGTCTTGG+TGG | + | chr2_1:57328121-57328140 | Msa0213750:intron | 50.0% |
| !! | GCTTGTTGTGATTGCAGGAC+TGG | + | chr2_1:57329379-57329398 | Msa0213750:intron | 50.0% |
| TCATGTTAACCGGTGTCCTC+GGG | - | chr2_1:57329872-57329891 | None:intergenic | 50.0% | |
| GTCATGTTAACCGGTGTCCT+CGG | - | chr2_1:57329873-57329892 | None:intergenic | 50.0% | |
| GGTGTACGTGAACAACAACG+AGG | + | chr2_1:57331323-57331342 | Msa0213750:five_prime_UTR | 50.0% | |
| ! | AACAACGAGGCTTGCTCTCA+CGG | + | chr2_1:57331336-57331355 | Msa0213750:five_prime_UTR | 50.0% |
| TTGCTCTCACGGAAGAAAGG+TGG | + | chr2_1:57331347-57331366 | Msa0213750:intron | 50.0% | |
| TGCTCTCACGGAAGAAAGGT+GGG | + | chr2_1:57331348-57331367 | Msa0213750:intron | 50.0% | |
| AGGAAGGGAGGAGAAGACTT+TGG | + | chr2_1:57331691-57331710 | Msa0213750:intron | 50.0% | |
| GGAAGGGAGGAGAAGACTTT+GGG | + | chr2_1:57331692-57331711 | Msa0213750:intron | 50.0% | |
| TCGACTCTCACTACCTTGGA+GGG | - | chr2_1:57331904-57331923 | None:intergenic | 50.0% | |
| GATCTCGACTCTCACTACCT+TGG | - | chr2_1:57331908-57331927 | None:intergenic | 50.0% | |
| TCGAGATCTTAGGCCAGATC+AGG | + | chr2_1:57331920-57331939 | Msa0213750:intron | 50.0% | |
| CGAGATCTTAGGCCAGATCA+GGG | + | chr2_1:57331921-57331940 | Msa0213750:intron | 50.0% | |
| ATCTTAGGCCAGATCAGGGA+GGG | + | chr2_1:57331925-57331944 | Msa0213750:intron | 50.0% | |
| AAGATTGGTGGGATCCCGTT+GGG | - | chr2_1:57332907-57332926 | None:intergenic | 50.0% | |
| AAAGATTGGTGGGATCCCGT+TGG | - | chr2_1:57332908-57332927 | None:intergenic | 50.0% | |
| ACGGGATCCCACCAATCTTT+CGG | + | chr2_1:57332908-57332927 | Msa0213750:intron | 50.0% | |
| GCCGATTGGTGGAATTTCGT+TGG | + | chr2_1:57333047-57333066 | Msa0213750:intron | 50.0% | |
| GCTCGACATGCAGTTCTTCA+AGG | + | chr2_1:57333116-57333135 | Msa0213750:intron | 50.0% | |
| ATCCTAGGCAAGATTGGGGA+GGG | - | chr2_1:57334046-57334065 | None:intergenic | 50.0% | |
| GGTAGAAACCAAGGTAGTCG+GGG | - | chr2_1:57334074-57334093 | None:intergenic | 50.0% | |
| AGACAATCAAGAGGCAGGAG+TGG | + | chr2_1:57334360-57334379 | Msa0213750:five_prime_UTR | 50.0% | |
| TGATAGCAGTGCCTGCTTTG+AGG | + | chr2_1:57334834-57334853 | Msa0213750:CDS | 50.0% | |
| CAACGGTCAAACCTCAAAGC+AGG | - | chr2_1:57334848-57334867 | None:intergenic | 50.0% | |
| !! | CTGCTTTGAGGTTTGACCGT+TGG | + | chr2_1:57334846-57334865 | Msa0213750:CDS | 50.0% |
| TGAGGTTTGACCGTTGGATG+GGG | + | chr2_1:57334852-57334871 | Msa0213750:CDS | 50.0% | |
| TAATCGTTGGCCCCATCCAA+CGG | - | chr2_1:57334865-57334884 | None:intergenic | 50.0% | |
| GGCCAAACCTGCATTCAATC+TGG | - | chr2_1:57335044-57335063 | None:intergenic | 50.0% | |
| GTGATCAAATGCGGCCAATG+TGG | - | chr2_1:57335430-57335449 | None:intergenic | 50.0% | |
| CACGATTCTCTACACTGCCA+TGG | + | chr2_1:57335447-57335466 | Msa0213750:intron | 50.0% | |
| GCAAGCAGTGAAGCCTTTGA+AGG | + | chr2_1:57335606-57335625 | Msa0213750:CDS | 50.0% | |
| GGAACAGGGCTTACAGTAGT+AGG | - | chr2_1:57335847-57335866 | None:intergenic | 50.0% | |
| CTGGGTATGGTAAGCCTCCA+TGG | + | chr2_1:57327709-57327728 | Msa0213750:five_prime_UTR | 55.0% | |
| ! | TCCAGTCGGTGCCTTTGATG+AGG | + | chr2_1:57328058-57328077 | Msa0213750:five_prime_UTR | 55.0% |
| !! | ACCTCATCAAAGGCACCGAC+TGG | - | chr2_1:57328062-57328081 | None:intergenic | 55.0% |
| ACCATCCTCTGCAAGCTTGC+AGG | + | chr2_1:57328260-57328279 | Msa0213750:intron | 55.0% | |
| GAAAGCCTGCAAGCTTGCAG+AGG | - | chr2_1:57328813-57328832 | None:intergenic | 55.0% | |
| GAAAGCCTGCAAGCTTGCAG+AGG | + | chr2_1:57328813-57328832 | Msa0213750:intron | 55.0% | |
| ACCATCCTCTGCAAGCTTGC+AGG | - | chr2_1:57328260-57328279 | None:intergenic | 55.0% | |
| ACGAATACGGACACGGACAC+CGG | - | chr2_1:57329078-57329097 | None:intergenic | 55.0% | |
| AACCAGTGTCCCGTAGACAC+CGG | - | chr2_1:57329738-57329757 | None:intergenic | 55.0% | |
| TTCTACCTGGCCATTGCACC+TGG | + | chr2_1:57330924-57330943 | Msa0213750:intron | 55.0% | |
| ! | GGCTTGCTCTCACGGAAGAA+AGG | + | chr2_1:57331344-57331363 | Msa0213750:five_prime_UTR | 55.0% |
| TGTGGGGCTTCCAAGTCAAG+TGG | + | chr2_1:57331567-57331586 | Msa0213750:five_prime_UTR | 55.0% | |
| GCGAGTTTAGAGAGGAAGGG+AGG | + | chr2_1:57331679-57331698 | Msa0213750:intron | 55.0% | |
| TCTCACTACCTTGGAGGGGA+GGG | - | chr2_1:57331899-57331918 | None:intergenic | 55.0% | |
| CGACTCTCACTACCTTGGAG+GGG | - | chr2_1:57331903-57331922 | None:intergenic | 55.0% | |
| CTCGACTCTCACTACCTTGG+AGG | - | chr2_1:57331905-57331924 | None:intergenic | 55.0% | |
| GATCTTAGGCCAGATCAGGG+AGG | + | chr2_1:57331924-57331943 | Msa0213750:intron | 55.0% | |
| CTACTGATCCCTCCCTGATC+TGG | - | chr2_1:57331936-57331955 | None:intergenic | 55.0% | |
| ATGCAGCCGTAGACCAGAAC+AGG | + | chr2_1:57332207-57332226 | Msa0213750:intron | 55.0% | |
| AATCGACATCGGCCGATTGG+TGG | + | chr2_1:57333036-57333055 | Msa0213750:intron | 55.0% | |
| GAGAGAGAGAGGGAGAGAGA+GGG | - | chr2_1:57333678-57333697 | None:intergenic | 55.0% | |
| AGAGAGAGAGAGGGAGAGAG+AGG | - | chr2_1:57333679-57333698 | None:intergenic | 55.0% | |
| GAGAGAGGGAGAGAGAGAGA+GGG | - | chr2_1:57333664-57333683 | None:intergenic | 55.0% | |
| AGAGAGAGGGAGAGAGAGAG+AGG | - | chr2_1:57333665-57333684 | None:intergenic | 55.0% | |
| GAGAGAGAGAGGGAGAGAGA+GGG | - | chr2_1:57333678-57333697 | None:intergenic | 55.0% | |
| AGAGAGAGAGAGGGAGAGAG+AGG | - | chr2_1:57333679-57333698 | None:intergenic | 55.0% | |
| TCCTAGGCAAGATTGGGGAG+GGG | - | chr2_1:57334045-57334064 | None:intergenic | 55.0% | |
| GATCCTAGGCAAGATTGGGG+AGG | - | chr2_1:57334047-57334066 | None:intergenic | 55.0% | |
| GTAGTCGGGGTCAAGATCCT+AGG | - | chr2_1:57334061-57334080 | None:intergenic | 55.0% | |
| GATCTTGACCCCGACTACCT+TGG | + | chr2_1:57334063-57334082 | Msa0213750:intron | 55.0% | |
| GCCTGCAAGCTTGCAGAGGA+TGG | - | chr2_1:57328817-57328836 | None:intergenic | 60.0% | |
| GCCTGCAAGCTTGCAGAGGA+TGG | + | chr2_1:57328817-57328836 | Msa0213750:intron | 60.0% | |
| ! | ATTAGCTGCGTCGGCGTGTC+CGG | + | chr2_1:57329038-57329057 | Msa0213750:intron | 60.0% |
| TCCGGTGTCCGTGTCGTATC+CGG | + | chr2_1:57329056-57329075 | Msa0213750:intron | 60.0% | |
| ACCGGATACGACACGGACAC+CGG | - | chr2_1:57329060-57329079 | None:intergenic | 60.0% | |
| CACGGACACCGGATACGACA+CGG | - | chr2_1:57329067-57329086 | None:intergenic | 60.0% | |
| AACCGGTGTCTACGGGACAC+TGG | + | chr2_1:57329733-57329752 | Msa0213750:intron | 60.0% | |
| ! | GTAGCCTTAACCAGTGCCCG+AGG | + | chr2_1:57329853-57329872 | Msa0213750:intron | 60.0% |
| !! | GTGTCCTCGGGCACTGGTTA+AGG | - | chr2_1:57329860-57329879 | None:intergenic | 60.0% |
| TAACCAGTGCCCGAGGACAC+CGG | + | chr2_1:57329860-57329879 | Msa0213750:intron | 60.0% | |
| CTCAACCAGGTGCAATGGCC+AGG | - | chr2_1:57330932-57330951 | None:intergenic | 60.0% | |
| !! | AGGGGAGGGCTTTGGAGAGT+TGG | - | chr2_1:57331885-57331904 | None:intergenic | 60.0% |
| TACCTTGGAGGGGAGGGCTT+TGG | - | chr2_1:57331893-57331912 | None:intergenic | 60.0% | |
| CTCTCACTACCTTGGAGGGG+AGG | - | chr2_1:57331900-57331919 | None:intergenic | 60.0% | |
| GAGAGGGAGGGAGAGAGAGA+GGG | - | chr2_1:57333702-57333721 | None:intergenic | 60.0% | |
| AGAGAGGGAGGGAGAGAGAG+AGG | - | chr2_1:57333703-57333722 | None:intergenic | 60.0% | |
| GAGAGAGAGGGAGGGAGAGA+GGG | - | chr2_1:57333718-57333737 | None:intergenic | 60.0% | |
| GAGAGAGGGAGAGAGAGGGA+GGG | - | chr2_1:57333674-57333693 | None:intergenic | 60.0% | |
| AGAGAGAGGGAGAGAGAGGG+AGG | - | chr2_1:57333675-57333694 | None:intergenic | 60.0% | |
| ACCCCTCCCCAATCTTGCCT+AGG | + | chr2_1:57334041-57334060 | Msa0213750:intron | 60.0% | |
| CAAGCAGTCAGCCACATCGG+TGG | + | chr2_1:57335129-57335148 | Msa0213750:intron | 60.0% | |
| TGACCTGTGTCGCGGCACAA+CGG | + | chr2_1:57335363-57335382 | Msa0213750:intron | 60.0% | |
| AATCCGTTGTGCCGCGACAC+AGG | - | chr2_1:57335369-57335388 | None:intergenic | 60.0% | |
| TAACCGGTGTCCTCGGGCAC+TGG | - | chr2_1:57329866-57329885 | None:intergenic | 65.0% | |
| CTCCAAAGCCCTCCCCTCCA+AGG | + | chr2_1:57331888-57331907 | Msa0213750:intron | 65.0% | |
| GAGAGGGAGGGAGAGAGGGA+GGG | - | chr2_1:57333714-57333733 | None:intergenic | 65.0% | |
| AGAGAGGGAGGGAGAGAGGG+AGG | - | chr2_1:57333715-57333734 | None:intergenic | 65.0% | |
| GGAGAGAGAGGGAGGGAGAG+AGG | - | chr2_1:57333719-57333738 | None:intergenic | 65.0% | |
| GCAGTCAGCCACATCGGTGG+CGG | + | chr2_1:57335132-57335151 | Msa0213750:intron | 65.0% | |
| !! | CAGCCACATCGGTGGCGGAC+TGG | + | chr2_1:57335137-57335156 | Msa0213750:intron | 70.0% |
| !! | CCACATCGGTGGCGGACTGG+CGG | + | chr2_1:57335140-57335159 | Msa0213750:intron | 70.0% |
| !! | ATCGGTGGCGGACTGGCGGT+TGG | + | chr2_1:57335144-57335163 | Msa0213750:intron | 70.0% |
| CCGCCAGTCCGCCACCGATG+TGG | - | chr2_1:57335143-57335162 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 57327208 | 57336111 | 57327208 | ID=Msa0213750;Name=Msa0213750 |
| chr2_1 | mRNA | 57327208 | 57336111 | 57327208 | ID=Msa0213750-mRNA-1;Parent=Msa0213750;Name=Msa0213750-mRNA-1;_AED=0.21;_eAED=0.21;_QI=765|1|1|1|0.4|0.45|11|241|133 |
| chr2_1 | exon | 57327208 | 57327448 | 57327208 | ID=Msa0213750-mRNA-1:exon:15869;Parent=Msa0213750-mRNA-1 |
| chr2_1 | exon | 57327678 | 57327745 | 57327678 | ID=Msa0213750-mRNA-1:exon:15870;Parent=Msa0213750-mRNA-1 |
| chr2_1 | exon | 57327829 | 57327912 | 57327829 | ID=Msa0213750-mRNA-1:exon:15871;Parent=Msa0213750-mRNA-1 |
| chr2_1 | exon | 57328016 | 57328079 | 57328016 | ID=Msa0213750-mRNA-1:exon:15872;Parent=Msa0213750-mRNA-1 |
| chr2_1 | exon | 57329380 | 57329426 | 57329380 | ID=Msa0213750-mRNA-1:exon:15873;Parent=Msa0213750-mRNA-1 |
| chr2_1 | exon | 57331311 | 57331365 | 57331311 | ID=Msa0213750-mRNA-1:exon:15874;Parent=Msa0213750-mRNA-1 |
| chr2_1 | exon | 57331565 | 57331603 | 57331565 | ID=Msa0213750-mRNA-1:exon:15875;Parent=Msa0213750-mRNA-1 |
| chr2_1 | exon | 57334342 | 57334507 | 57334342 | ID=Msa0213750-mRNA-1:exon:15876;Parent=Msa0213750-mRNA-1 |
| chr2_1 | exon | 57334829 | 57334906 | 57334829 | ID=Msa0213750-mRNA-1:exon:15877;Parent=Msa0213750-mRNA-1 |
| chr2_1 | exon | 57334999 | 57335055 | 57334999 | ID=Msa0213750-mRNA-1:exon:15878;Parent=Msa0213750-mRNA-1 |
| chr2_1 | exon | 57335603 | 57336111 | 57335603 | ID=Msa0213750-mRNA-1:exon:15879;Parent=Msa0213750-mRNA-1 |
| chr2_1 | five_prime_UTR | 57327208 | 57327448 | 57327208 | ID=Msa0213750-mRNA-1:five_prime_utr;Parent=Msa0213750-mRNA-1 |
| chr2_1 | five_prime_UTR | 57327678 | 57327745 | 57327678 | ID=Msa0213750-mRNA-1:five_prime_utr;Parent=Msa0213750-mRNA-1 |
| chr2_1 | five_prime_UTR | 57327829 | 57327912 | 57327829 | ID=Msa0213750-mRNA-1:five_prime_utr;Parent=Msa0213750-mRNA-1 |
| chr2_1 | five_prime_UTR | 57328016 | 57328079 | 57328016 | ID=Msa0213750-mRNA-1:five_prime_utr;Parent=Msa0213750-mRNA-1 |
| chr2_1 | five_prime_UTR | 57329380 | 57329426 | 57329380 | ID=Msa0213750-mRNA-1:five_prime_utr;Parent=Msa0213750-mRNA-1 |
| chr2_1 | five_prime_UTR | 57331311 | 57331365 | 57331311 | ID=Msa0213750-mRNA-1:five_prime_utr;Parent=Msa0213750-mRNA-1 |
| chr2_1 | five_prime_UTR | 57331565 | 57331603 | 57331565 | ID=Msa0213750-mRNA-1:five_prime_utr;Parent=Msa0213750-mRNA-1 |
| chr2_1 | five_prime_UTR | 57334342 | 57334507 | 57334342 | ID=Msa0213750-mRNA-1:five_prime_utr;Parent=Msa0213750-mRNA-1 |
| chr2_1 | five_prime_UTR | 57334829 | 57334829 | 57334829 | ID=Msa0213750-mRNA-1:five_prime_utr;Parent=Msa0213750-mRNA-1 |
| chr2_1 | CDS | 57334830 | 57334906 | 57334830 | ID=Msa0213750-mRNA-1:cds;Parent=Msa0213750-mRNA-1 |
| chr2_1 | CDS | 57334999 | 57335055 | 57334999 | ID=Msa0213750-mRNA-1:cds;Parent=Msa0213750-mRNA-1 |
| chr2_1 | CDS | 57335603 | 57335870 | 57335603 | ID=Msa0213750-mRNA-1:cds;Parent=Msa0213750-mRNA-1 |
| chr2_1 | three_prime_UTR | 57335871 | 57336111 | 57335871 | ID=Msa0213750-mRNA-1:three_prime_utr;Parent=Msa0213750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
