Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295290 | XP_039686649.1 | 97.811 | 594 | 11 | 1 | 1 | 594 | 1 | 592 | 0.0 | 1195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295290 | sp|Q9FZ97|MUC70_ARATH | 56.818 | 528 | 204 | 10 | 1 | 523 | 1 | 509 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295290 | G7IRA5 | 97.811 | 594 | 11 | 1 | 1 | 594 | 1 | 592 | 0.0 | 1195 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0295290 | Msa0793330 | 0.946748 | 2.552323e-105 | -8.615850e-47 |
| Msa0295290 | Msa1450910 | 0.821315 | 4.311293e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295290 | MtrunA17_Chr2g0317511 | 97.811 | 594 | 11 | 1 | 1 | 594 | 1 | 592 | 0.0 | 1195 |
| Msa0295290 | MtrunA17_Chr4g0047251 | 56.014 | 557 | 213 | 9 | 39 | 591 | 1 | 529 | 0.0 | 600 |
| Msa0295290 | MtrunA17_Chr2g0282261 | 56.075 | 535 | 207 | 12 | 1 | 532 | 1 | 510 | 0.0 | 570 |
| Msa0295290 | MtrunA17_Chr8g0361841 | 46.815 | 314 | 153 | 8 | 227 | 533 | 161 | 467 | 8.91e-82 | 264 |
| Msa0295290 | MtrunA17_Chr8g0378731 | 38.968 | 349 | 196 | 8 | 181 | 524 | 114 | 450 | 6.40e-77 | 253 |
| Msa0295290 | MtrunA17_Chr1g0200501 | 46.885 | 305 | 151 | 7 | 227 | 523 | 395 | 696 | 3.22e-76 | 256 |
| Msa0295290 | MtrunA17_Chr1g0154411 | 40.066 | 302 | 159 | 8 | 227 | 522 | 175 | 460 | 5.12e-55 | 193 |
| Msa0295290 | MtrunA17_Chr2g0285981 | 34.722 | 288 | 171 | 7 | 227 | 508 | 117 | 393 | 3.07e-45 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295290 | AT1G53040.2 | 59.503 | 563 | 180 | 13 | 38 | 583 | 2 | 533 | 0.0 | 600 |
| Msa0295290 | AT1G53040.1 | 59.503 | 563 | 180 | 13 | 38 | 583 | 2 | 533 | 0.0 | 600 |
| Msa0295290 | AT1G53040.6 | 59.503 | 563 | 180 | 13 | 38 | 583 | 2 | 533 | 0.0 | 600 |
| Msa0295290 | AT1G28240.1 | 56.818 | 528 | 204 | 10 | 1 | 523 | 1 | 509 | 0.0 | 587 |
| Msa0295290 | AT1G53040.3 | 61.723 | 499 | 155 | 8 | 38 | 520 | 2 | 480 | 0.0 | 579 |
| Msa0295290 | AT1G53040.4 | 61.723 | 499 | 155 | 8 | 38 | 520 | 2 | 480 | 0.0 | 579 |
| Msa0295290 | AT1G53040.5 | 57.773 | 431 | 146 | 8 | 38 | 452 | 2 | 412 | 1.13e-154 | 451 |
| Msa0295290 | AT2G02910.2 | 40.633 | 379 | 188 | 12 | 169 | 534 | 105 | 459 | 1.10e-80 | 261 |
| Msa0295290 | AT2G02910.1 | 40.633 | 379 | 188 | 12 | 169 | 534 | 105 | 459 | 1.10e-80 | 261 |
| Msa0295290 | AT4G09630.2 | 39.862 | 434 | 222 | 14 | 108 | 523 | 270 | 682 | 1.51e-80 | 268 |
| Msa0295290 | AT4G09630.1 | 39.862 | 434 | 222 | 14 | 108 | 523 | 285 | 697 | 3.10e-80 | 267 |
| Msa0295290 | AT1G34550.2 | 46.580 | 307 | 149 | 8 | 227 | 523 | 327 | 628 | 1.39e-78 | 261 |
| Msa0295290 | AT1G34550.1 | 46.580 | 307 | 149 | 8 | 227 | 523 | 421 | 722 | 6.26e-78 | 261 |
| Msa0295290 | AT4G38500.1 | 41.349 | 341 | 180 | 10 | 178 | 512 | 107 | 433 | 1.33e-71 | 239 |
| Msa0295290 | AT5G42660.1 | 39.262 | 298 | 167 | 7 | 227 | 522 | 168 | 453 | 8.33e-61 | 209 |
| Msa0295290 | AT5G46220.1 | 36.396 | 283 | 162 | 8 | 227 | 501 | 118 | 390 | 1.16e-43 | 162 |
Find 201 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAGTATCAATATGTTTC+TGG | 0.151283 | 2_3:+47841635 | Msa0295290:CDS |
| CCAACATCCGATATTCAATT+TGG | 0.161998 | 2_3:+47840077 | Msa0295290:CDS |
| TATGAGAAATGCCAGTATTT+TGG | 0.170087 | 2_3:+47839755 | Msa0295290:CDS |
| CAACTCCTCTCTTTCTCTTT+GGG | 0.171333 | 2_3:-47837082 | None:intergenic |
| ATCAAGACTAAAATAAAATT+TGG | 0.222129 | 2_3:-47842533 | None:intergenic |
| GCAGGAGGAGAGTTGGATTA+TGG | 0.230597 | 2_3:+47839781 | Msa0295290:CDS |
| ACAACTCCTCTCTTTCTCTT+TGG | 0.232114 | 2_3:-47837083 | None:intergenic |
| CCAGAGGGCGGCTCTGATTT+TGG | 0.239298 | 2_3:+47839004 | Msa0295290:CDS |
| CAAATCTGTTTACCTGCTTA+TGG | 0.239991 | 2_3:+47841532 | Msa0295290:CDS |
| ATCAACGCCTATAACTTTAT+AGG | 0.256052 | 2_3:-47838470 | None:intergenic |
| TACCTTTCAAGAATTTGATA+TGG | 0.259862 | 2_3:-47840130 | None:intergenic |
| CTTAGTACCTATAAAGTTAT+AGG | 0.264807 | 2_3:+47838463 | Msa0295290:CDS |
| ATTGTTGCATCTGCCATATT+TGG | 0.266284 | 2_3:+47839553 | Msa0295290:CDS |
| ATTCTGTGCAAAAGAAGTTT+TGG | 0.269371 | 2_3:-47840049 | None:intergenic |
| ATTTACAATTAAAACATAAA+AGG | 0.286362 | 2_3:-47842679 | None:intergenic |
| ATATTCCATACGCTGATTCT+AGG | 0.289829 | 2_3:+47839823 | Msa0295290:CDS |
| TTGTTCTTACCACTAGTTAT+AGG | 0.290716 | 2_3:-47841356 | None:intergenic |
| ACTCTTGACAGATTTGTAAA+AGG | 0.291042 | 2_3:+47839454 | Msa0295290:intron |
| AACAATAGAAACTAAGTTAA+AGG | 0.297917 | 2_3:+47838495 | Msa0295290:CDS |
| GTCATAAATTGTACCAAATA+TGG | 0.301494 | 2_3:-47839566 | None:intergenic |
| CAGAGGCTTGTTAGTAGTAT+AGG | 0.308587 | 2_3:-47842424 | None:intergenic |
| TGCTTGTTTACTGATGTTCC+TGG | 0.308633 | 2_3:-47839682 | None:intergenic |
| TGTTACAGTGGTGGGTTTGA+TGG | 0.316135 | 2_3:+47836906 | Msa0295290:five_prime_UTR |
| CAGGTAAACAGATTTGTAAT+TGG | 0.326045 | 2_3:-47841525 | None:intergenic |
| CGATATTCAATTTGGATTGA+TGG | 0.327205 | 2_3:+47840085 | Msa0295290:CDS |
| CTTTCTCTTTGGGGTTATAA+AGG | 0.333461 | 2_3:-47837072 | None:intergenic |
| GAAATGGCAAAAGTAGCATT+TGG | 0.334302 | 2_3:-47841191 | None:intergenic |
| TTGAAATCAAATGTAGCTTC+TGG | 0.336024 | 2_3:+47836748 | Msa0295290:five_prime_UTR |
| GAATCAGAGAATTGGGGAAT+TGG | 0.340394 | 2_3:-47836561 | None:intergenic |
| CGGTAACGTTTCGCAGGTTC+CGG | 0.346495 | 2_3:+47837021 | Msa0295290:CDS |
| GGGAAACCCACGAATGATTT+CGG | 0.350801 | 2_3:-47836715 | None:intergenic |
| ATGGTTTAACTCATTATTCC+AGG | 0.351362 | 2_3:+47841324 | Msa0295290:CDS |
| CAAATTGAATATCGGATGTT+GGG | 0.357092 | 2_3:-47840076 | None:intergenic |
| TGAGGACGAGGAGGAGGAGG+AGG | 0.358819 | 2_3:-47842354 | None:intergenic |
| AATCGGAGAATCAGAGAATT+GGG | 0.364490 | 2_3:-47836568 | None:intergenic |
| GAATCGGAGAATCAGAGAAT+TGG | 0.373549 | 2_3:-47836569 | None:intergenic |
| AATCAGAGAATTGGGGAATT+GGG | 0.381452 | 2_3:-47836560 | None:intergenic |
| TAACCCACAATGCACTTTCA+TGG | 0.381800 | 2_3:-47839077 | None:intergenic |
| AGAGATGACTGGAGTGTCAT+TGG | 0.383636 | 2_3:+47836955 | Msa0295290:exon |
| AGCAGACCTGGGCGCCAGAC+TGG | 0.385517 | 2_3:+47839478 | Msa0295290:CDS |
| ACCTTTCAAGAATTTGATAT+GGG | 0.390461 | 2_3:-47840129 | None:intergenic |
| AATTATATGAAGATCGTAAA+GGG | 0.390591 | 2_3:-47838582 | None:intergenic |
| TCGTGTATCTTCAATTTCAT+TGG | 0.390782 | 2_3:-47838431 | None:intergenic |
| GCAGAGGCTAATAAAGTTGC+TGG | 0.394494 | 2_3:+47841248 | Msa0295290:CDS |
| CTCGTCCAGTTGTTGTAATT+CGG | 0.396515 | 2_3:+47842379 | Msa0295290:CDS |
| CATCAATCCAAATTGAATAT+CGG | 0.397863 | 2_3:-47840084 | None:intergenic |
| GAAGATCGTAAAGGGGAAAC+AGG | 0.398793 | 2_3:-47838574 | None:intergenic |
| ATGCTTCTCATGCTTCTTTG+TGG | 0.400181 | 2_3:+47837145 | Msa0295290:CDS |
| TGTTCTCCAATACGTCTCTA+TGG | 0.400680 | 2_3:-47842326 | None:intergenic |
| TTGTATATTTGTCGTCATCT+TGG | 0.402404 | 2_3:+47837106 | Msa0295290:CDS |
| GGACGCCGAATTACAACAAC+TGG | 0.408307 | 2_3:-47842384 | None:intergenic |
| AGTGGGTCCCACTGAGACTC+CGG | 0.417933 | 2_3:-47836641 | None:intergenic |
| AGAGGCTTGTTAGTAGTATA+GGG | 0.418244 | 2_3:-47842423 | None:intergenic |
| TATAAAGTTATAGGCGTTGA+TGG | 0.419422 | 2_3:+47838472 | Msa0295290:CDS |
| TGCATTTCCTCCTCCTCCAC+CGG | 0.419731 | 2_3:+47838657 | Msa0295290:CDS |
| TGAAATCAAATGTAGCTTCT+GGG | 0.422798 | 2_3:+47836749 | Msa0295290:five_prime_UTR |
| AATCAGCGTATGGAATATTC+CGG | 0.426989 | 2_3:-47839818 | None:intergenic |
| ACAAAACTTACGGCGTGGTC+CGG | 0.429802 | 2_3:-47838695 | None:intergenic |
| GAGGCGTAACTTTGTAATAC+AGG | 0.430563 | 2_3:+47841665 | Msa0295290:CDS |
| CACGGTAAGAGACAAAATAA+TGG | 0.431368 | 2_3:+47841602 | Msa0295290:CDS |
| GGAGACTCTGATGGGGAACT+TGG | 0.434048 | 2_3:-47838929 | None:intergenic |
| AAATGGCAAAAGTAGCATTT+GGG | 0.439586 | 2_3:-47841190 | None:intergenic |
| CTATAACTTTATAGGTACTA+AGG | 0.440362 | 2_3:-47838462 | None:intergenic |
| GGGAATTGGGAGATGGAAGA+TGG | 0.441058 | 2_3:-47836547 | None:intergenic |
| CCTCCTGCTATCCAAAATAC+TGG | 0.441277 | 2_3:-47839766 | None:intergenic |
| CTAGGCGCGGGAGAGGAGAT+AGG | 0.442545 | 2_3:+47842460 | Msa0295290:CDS |
| TCCCACTGAGACTCCGGGGA+AGG | 0.446054 | 2_3:-47836635 | None:intergenic |
| TTGGATAGCAGGAGGAGAGT+TGG | 0.453109 | 2_3:+47839774 | Msa0295290:CDS |
| CGATCTTCATATAATTTGAA+AGG | 0.456833 | 2_3:+47838589 | Msa0295290:CDS |
| GCGTCTATAGTGTCTTGAAA+TGG | 0.457326 | 2_3:-47841207 | None:intergenic |
| AAATTGAACTTGGCGATCAA+TGG | 0.458082 | 2_3:-47841288 | None:intergenic |
| AAATAATGGCAAAAGTTGAT+TGG | 0.458296 | 2_3:+47841616 | Msa0295290:CDS |
| CGAGGATGAGGACGAGGAGG+AGG | 0.460122 | 2_3:-47842360 | None:intergenic |
| CTAATGATAACACAACCTTC+AGG | 0.460865 | 2_3:-47841492 | None:intergenic |
| GGATGAGGACGAGGAGGAGG+AGG | 0.462348 | 2_3:-47842357 | None:intergenic |
| CTTCTACGTCGTTGACAAGT+AGG | 0.463711 | 2_3:+47838527 | Msa0295290:CDS |
| GATACCCTCCTCTGGAAGAA+AGG | 0.465155 | 2_3:+47839029 | Msa0295290:CDS |
| TATGGAGAATCATTGTTGTC+CGG | 0.466157 | 2_3:+47839799 | Msa0295290:CDS |
| GGCGTACCATAGAGACGTAT+TGG | 0.468562 | 2_3:+47842320 | Msa0295290:intron |
| GTGTCATTGGGTCTACGAAC+AGG | 0.469533 | 2_3:+47836968 | Msa0295290:CDS |
| CTAGCTATAGCTTGCTCCAC+AGG | 0.472659 | 2_3:-47838902 | None:intergenic |
| TTGATTGTTGTTACAGTGGT+GGG | 0.472782 | 2_3:+47836898 | Msa0295290:five_prime_UTR |
| GGGAGAGGAGATAGGAGATC+AGG | 0.476344 | 2_3:+47842468 | Msa0295290:CDS |
| GAGGAGGAGGAAATGCAAAA+TGG | 0.477057 | 2_3:-47838651 | None:intergenic |
| CCAAATTGAATATCGGATGT+TGG | 0.483520 | 2_3:-47840077 | None:intergenic |
| ATTTCCTCTTCACCCTTCCC+CGG | 0.486772 | 2_3:+47836622 | Msa0295290:five_prime_UTR |
| CTTCTATCAGCCGGTGGAGG+AGG | 0.487564 | 2_3:-47838667 | None:intergenic |
| CTATCTCCTCTCCCGCGCCT+AGG | 0.488221 | 2_3:-47842459 | None:intergenic |
| GCTTGTTTACTGATGTTCCT+GGG | 0.488794 | 2_3:-47839681 | None:intergenic |
| AAGAATCCTAGGCGCGGGAG+AGG | 0.488826 | 2_3:+47842453 | Msa0295290:CDS |
| GAGCCGCCCTCTGGTTCACT+TGG | 0.488920 | 2_3:-47838995 | None:intergenic |
| GGATTGAGGTGTAGCGTGAA+TGG | 0.489165 | 2_3:-47836514 | None:intergenic |
| CTATCAGCCGGTGGAGGAGG+AGG | 0.489293 | 2_3:-47838664 | None:intergenic |
| GTGGGTCCCACTGAGACTCC+GGG | 0.490349 | 2_3:-47836640 | None:intergenic |
| TGAATGGAGGGAAGAGAGAA+TGG | 0.492726 | 2_3:-47836498 | None:intergenic |
| TACGCTGATTCTAGGCGTAA+TGG | 0.493420 | 2_3:+47839831 | Msa0295290:CDS |
| AGACCATGAAAGTGCATTGT+GGG | 0.494240 | 2_3:+47839074 | Msa0295290:CDS |
| GATATTCAATTTGGATTGAT+GGG | 0.495126 | 2_3:+47840086 | Msa0295290:CDS |
| CATCAAAATCAAATCCAGTC+TGG | 0.495263 | 2_3:-47839492 | None:intergenic |
| TGATGTCTTTGTCGAGGCAG+AGG | 0.497324 | 2_3:+47841232 | Msa0295290:CDS |
| GAAATCAATGAACGGAATCT+CGG | 0.498803 | 2_3:-47836604 | None:intergenic |
| GAGATGACTGGAGTGTCATT+GGG | 0.500498 | 2_3:+47836956 | Msa0295290:exon |
| TTGTTAGTAGTATAGGGAAC+AGG | 0.504095 | 2_3:-47842417 | None:intergenic |
| AACTCCTCTCTTTCTCTTTG+GGG | 0.506867 | 2_3:-47837081 | None:intergenic |
| CCCACTGAGACTCCGGGGAA+GGG | 0.507237 | 2_3:-47836634 | None:intergenic |
| TTTGTAAAAGGAAGCAGACC+TGG | 0.508151 | 2_3:+47839466 | Msa0295290:CDS |
| TATGTGAGAGTGCGAAGTAC+AGG | 0.510947 | 2_3:-47838950 | None:intergenic |
| CCCTTCCCCGGAGTCTCAGT+GGG | 0.512104 | 2_3:+47836634 | Msa0295290:five_prime_UTR |
| CAGATGCAACAATGATATCA+TGG | 0.513495 | 2_3:-47839543 | None:intergenic |
| TGAGGAAGACCTCTTAGAGT+TGG | 0.514183 | 2_3:+47839513 | Msa0295290:CDS |
| TGGTGGGTTTGATGGTGAAA+AGG | 0.518260 | 2_3:+47836914 | Msa0295290:five_prime_UTR |
| CCAAAATCAGAGCCGCCCTC+TGG | 0.518922 | 2_3:-47839004 | None:intergenic |
| GGTATTGATAAAATTGAACT+TGG | 0.519689 | 2_3:-47841298 | None:intergenic |
| TGGAAACTTGATCGGAAAAG+AGG | 0.521482 | 2_3:-47836665 | None:intergenic |
| TCAAATCCAGTCTGGCGCCC+AGG | 0.522524 | 2_3:-47839484 | None:intergenic |
| ATTGAAAGGAGAGAGATGAC+TGG | 0.525842 | 2_3:+47836944 | Msa0295290:exon |
| TTATATCATCCAGGTTCTTG+TGG | 0.528214 | 2_3:+47841165 | Msa0295290:intron |
| CTATACTACTAACAAGCCTC+TGG | 0.528643 | 2_3:+47842425 | Msa0295290:CDS |
| TTTGATTTCAAGCGATGAGA+AGG | 0.529884 | 2_3:-47836736 | None:intergenic |
| TTTGATTGTTGTTACAGTGG+TGG | 0.530497 | 2_3:+47836897 | Msa0295290:five_prime_UTR |
| CTTGATCGGAAAAGAGGAAG+TGG | 0.531481 | 2_3:-47836659 | None:intergenic |
| ACAACAACTGGACGAGGATG+AGG | 0.534832 | 2_3:-47842372 | None:intergenic |
| AAATTATATGAAGATCGTAA+AGG | 0.535453 | 2_3:-47838583 | None:intergenic |
| ATTTGTCGTCATCTTGGTCG+TGG | 0.536035 | 2_3:+47837112 | Msa0295290:CDS |
| CGTCTTCTATCAGCCGGTGG+AGG | 0.539441 | 2_3:-47838670 | None:intergenic |
| CTAGGATTCTTCTTCACCAG+AGG | 0.540636 | 2_3:-47842441 | None:intergenic |
| AGAATTGGGGAATTGGGAGA+TGG | 0.543927 | 2_3:-47836554 | None:intergenic |
| ATGGAGATGGTGATGGATTG+AGG | 0.544586 | 2_3:-47836528 | None:intergenic |
| CGAAGTACAGGAGACTCTGA+TGG | 0.547259 | 2_3:-47838938 | None:intergenic |
| ATGAACGGAATCTCGGCGGT+TGG | 0.549569 | 2_3:-47836597 | None:intergenic |
| TCATCAATGAACATATAGAA+AGG | 0.552097 | 2_3:-47839717 | None:intergenic |
| CTCTGGTGAAGAAGAATCCT+AGG | 0.552954 | 2_3:+47842442 | Msa0295290:CDS |
| GAAATCAAATGTAGCTTCTG+GGG | 0.554318 | 2_3:+47836750 | Msa0295290:five_prime_UTR |
| TACAATTAAAACATAAAAGG+AGG | 0.554568 | 2_3:-47842676 | None:intergenic |
| ACCCATATCAAATTCTTGAA+AGG | 0.556489 | 2_3:+47840128 | Msa0295290:CDS |
| GAAGTACAGGAGACTCTGAT+GGG | 0.558730 | 2_3:-47838937 | None:intergenic |
| GGTACTGATCCAACTCTAAG+AGG | 0.559165 | 2_3:-47839522 | None:intergenic |
| ATGGAAGATGGAGATGGTGA+TGG | 0.559399 | 2_3:-47836535 | None:intergenic |
| GCCTCTGCAGATGTGCCTGA+AGG | 0.559588 | 2_3:+47841477 | Msa0295290:intron |
| AGTTATAGGAAGCTTAGCCC+TGG | 0.559911 | 2_3:-47841342 | None:intergenic |
| TCAAAACGGTAACGTTTCGC+AGG | 0.562363 | 2_3:+47837015 | Msa0295290:CDS |
| AACTTCATTGAACCATAAGC+AGG | 0.563277 | 2_3:-47841544 | None:intergenic |
| ATACCCTCCTCTGGAAGAAA+GGG | 0.563454 | 2_3:+47839030 | Msa0295290:CDS |
| TCTCTGCAGTTGATTCAAAA+CGG | 0.563566 | 2_3:+47837001 | Msa0295290:CDS |
| GAAAAGGAGATGAAATTGAA+AGG | 0.566132 | 2_3:+47836930 | Msa0295290:five_prime_UTR |
| CCGGTACGTCTTCTATCAGC+CGG | 0.566719 | 2_3:-47838676 | None:intergenic |
| ACCCTTCCCCGGAGTCTCAG+TGG | 0.569276 | 2_3:+47836633 | Msa0295290:five_prime_UTR |
| TGGTTTAACTCATTATTCCA+GGG | 0.573563 | 2_3:+47841325 | Msa0295290:CDS |
| AAAAGGATCTTCCTCTACTG+TGG | 0.574720 | 2_3:+47838615 | Msa0295290:CDS |
| TCAAAATCCGAAATCATTCG+TGG | 0.576868 | 2_3:+47836708 | Msa0295290:five_prime_UTR |
| ATAACCCCAAAGAGAAAGAG+AGG | 0.578050 | 2_3:+47837077 | Msa0295290:CDS |
| TTGATTTCAAGCGATGAGAA+GGG | 0.579782 | 2_3:-47836735 | None:intergenic |
| TCGGCGGTTGGAGTTCGAAT+CGG | 0.580103 | 2_3:-47836585 | None:intergenic |
| AGATTTGATTGTTGTTACAG+TGG | 0.581260 | 2_3:+47836894 | Msa0295290:five_prime_UTR |
| GGTCTACGAACAGGTAGCTA+TGG | 0.582952 | 2_3:+47836977 | Msa0295290:CDS |
| TCCTGTGTGCTATATTCCTG+TGG | 0.583338 | 2_3:+47838886 | Msa0295290:CDS |
| TGAGGTGTAGCGTGAATGGA+GGG | 0.584497 | 2_3:-47836510 | None:intergenic |
| ATGATGTAATACAGCAGCCC+AGG | 0.585632 | 2_3:+47839664 | Msa0295290:CDS |
| TGAAGAAGAATCCTAGGCGC+GGG | 0.587189 | 2_3:+47842448 | Msa0295290:CDS |
| GAAGCTCTACGAACAAGCAC+CGG | 0.587738 | 2_3:-47837040 | None:intergenic |
| TGATTCTAGGCGTAATGGAA+AGG | 0.589215 | 2_3:+47839836 | Msa0295290:CDS |
| AAAGGATCTTCCTCTACTGT+GGG | 0.590284 | 2_3:+47838616 | Msa0295290:CDS |
| CGAATTACAACAACTGGACG+AGG | 0.592297 | 2_3:-47842378 | None:intergenic |
| TTGAGGTGTAGCGTGAATGG+AGG | 0.592594 | 2_3:-47836511 | None:intergenic |
| GCGTCCCTTTCTTCCAGAGG+AGG | 0.594997 | 2_3:-47839034 | None:intergenic |
| CGTCCCTTTCTTCCAGAGGA+GGG | 0.599989 | 2_3:-47839033 | None:intergenic |
| GAGACCATGAAAGTGCATTG+TGG | 0.600387 | 2_3:+47839073 | Msa0295290:CDS |
| CAAAATCCGAAATCATTCGT+GGG | 0.600820 | 2_3:+47836709 | Msa0295290:five_prime_UTR |
| TATAACTTTATAGGTACTAA+GGG | 0.601886 | 2_3:-47838461 | None:intergenic |
| GCTAAGCTTCCTATAACTAG+TGG | 0.604377 | 2_3:+47841347 | Msa0295290:CDS |
| GACTCCGGGGAAGGGTGAAG+AGG | 0.604662 | 2_3:-47836626 | None:intergenic |
| ATATGTTTCTGGATTGTGAG+AGG | 0.612741 | 2_3:+47841646 | Msa0295290:CDS |
| GAAGCGTCCCTTTCTTCCAG+AGG | 0.614144 | 2_3:-47839037 | None:intergenic |
| ACGCTTTGATGTCTTTGTCG+AGG | 0.624568 | 2_3:+47841226 | Msa0295290:CDS |
| AAATTGAATATCGGATGTTG+GGG | 0.626381 | 2_3:-47840075 | None:intergenic |
| GGCTGCTTTACACTTTACAA+AGG | 0.627522 | 2_3:+47837187 | Msa0295290:CDS |
| ACTGATCTCTAGAAGTAAAG+CGG | 0.629422 | 2_3:-47841569 | None:intergenic |
| ACTGGACGAGGATGAGGACG+AGG | 0.632821 | 2_3:-47842366 | None:intergenic |
| TTGTAAAAGGAAGCAGACCT+GGG | 0.632901 | 2_3:+47839467 | Msa0295290:CDS |
| TTAGTAGTATAGGGAACAGG+TGG | 0.633478 | 2_3:-47842414 | None:intergenic |
| TGGGAGATGGAAGATGGAGA+TGG | 0.635417 | 2_3:-47836541 | None:intergenic |
| TTACGCCTAGAATCAGCGTA+TGG | 0.636495 | 2_3:-47839828 | None:intergenic |
| ATTATATGAAGATCGTAAAG+GGG | 0.638021 | 2_3:-47838581 | None:intergenic |
| ACACTGATGTCCCACAGTAG+AGG | 0.638638 | 2_3:-47838626 | None:intergenic |
| GGAACATCAGTAAACAAGCA+AGG | 0.641755 | 2_3:+47839685 | Msa0295290:CDS |
| GTGAAGAAGAATCCTAGGCG+CGG | 0.647847 | 2_3:+47842447 | Msa0295290:CDS |
| GTGAAGAGGAAATCAATGAA+CGG | 0.649413 | 2_3:-47836612 | None:intergenic |
| TAGGGAACAGGTGGAAGACG+AGG | 0.652873 | 2_3:-47842405 | None:intergenic |
| ATCGGAGAATCAGAGAATTG+GGG | 0.655976 | 2_3:-47836567 | None:intergenic |
| TATGTTTCCAAGTGAACCAG+AGG | 0.659114 | 2_3:+47838988 | Msa0295290:CDS |
| CCGGCTGATAGAAGACGTAC+CGG | 0.661574 | 2_3:+47838676 | Msa0295290:CDS |
| TTGATCGGAAAAGAGGAAGT+GGG | 0.664244 | 2_3:-47836658 | None:intergenic |
| GTACGTCTTCTATCAGCCGG+TGG | 0.665787 | 2_3:-47838673 | None:intergenic |
| TTTCCAAGTGAACCAGAGGG+CGG | 0.677607 | 2_3:+47838992 | Msa0295290:CDS |
| GGACGAGGATGAGGACGAGG+AGG | 0.696045 | 2_3:-47842363 | None:intergenic |
| ATGTTTCCAAGTGAACCAGA+GGG | 0.698530 | 2_3:+47838989 | Msa0295290:CDS |
| AATAATGAGTTAAACCATCG+TGG | 0.700929 | 2_3:-47841319 | None:intergenic |
| ATCAATGAACGGAATCTCGG+CGG | 0.703651 | 2_3:-47836601 | None:intergenic |
| TGGGTCCCACTGAGACTCCG+GGG | 0.710691 | 2_3:-47836639 | None:intergenic |
| TCCACAGGAATATAGCACAC+AGG | 0.715049 | 2_3:-47838887 | None:intergenic |
| AAGTACAGGAGACTCTGATG+GGG | 0.744993 | 2_3:-47838936 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTTATATTAATTTCTAAA+GGG | - | chr2_3:47838205-47838224 | None:intergenic | 10.0% |
| !! | TTAGTTATATTAATTTCTAA+AGG | - | chr2_3:47838206-47838225 | None:intergenic | 10.0% |
| !! | TATTTAAAAGTGAAAAAAAA+TGG | - | chr2_3:47841747-47841766 | None:intergenic | 10.0% |
| !! | ATTTACAATTAAAACATAAA+AGG | - | chr2_3:47842682-47842701 | None:intergenic | 10.0% |
| !! | TTTCTATCATTAAATCATAT+CGG | + | chr2_3:47837297-47837316 | Msa0295290:intron | 15.0% |
| !! | ATTATATTCATAATTTGATC+TGG | - | chr2_3:47837409-47837428 | None:intergenic | 15.0% |
| !! | AGATCAAATTATGAATATAA+TGG | + | chr2_3:47837408-47837427 | Msa0295290:intron | 15.0% |
| !!! | TTAAACTAGTTTTGTAATAT+TGG | + | chr2_3:47838280-47838299 | Msa0295290:intron | 15.0% |
| !! | TATAATTTGAAAGGAAAAAA+AGG | + | chr2_3:47838598-47838617 | Msa0295290:CDS | 15.0% |
| !!! | TTTTTAATTTTCTCATAACT+TGG | + | chr2_3:47839118-47839137 | Msa0295290:intron | 15.0% |
| !! | TTTGTAAGTTTGTAATAAAT+AGG | + | chr2_3:47840784-47840803 | Msa0295290:intron | 15.0% |
| !!! | CTCAATTTTCTAAAAATAAT+TGG | + | chr2_3:47841804-47841823 | Msa0295290:intron | 15.0% |
| !! | AAAAATATAGACTAAAAACA+AGG | - | chr2_3:47841954-47841973 | None:intergenic | 15.0% |
| !!! | ATAAAGAATTTTTATGTTGT+TGG | + | chr2_3:47842278-47842297 | Msa0295290:intron | 15.0% |
| !! | ATCAAGACTAAAATAAAATT+TGG | - | chr2_3:47842536-47842555 | None:intergenic | 15.0% |
| !!! | TTATTGTTTTCAAGAGATTT+TGG | + | chr2_3:47836865-47836884 | Msa0295290:five_prime_UTR | 20.0% |
| !! | ACAAATCACTATATATAGTA+AGG | + | chr2_3:47837360-47837379 | Msa0295290:intron | 20.0% |
| !! | TTGTCAAATTATGAATATAG+CGG | + | chr2_3:47837450-47837469 | Msa0295290:intron | 20.0% |
| !!! | CAACAAAATATTTCTATCTT+TGG | - | chr2_3:47838065-47838084 | None:intergenic | 20.0% |
| !!! | CAAAGATAGAAATATTTTGT+TGG | + | chr2_3:47838063-47838082 | Msa0295290:intron | 20.0% |
| !! | ACATGTTAAGAATCTAAAAA+TGG | - | chr2_3:47838157-47838176 | None:intergenic | 20.0% |
| !! | TATAACTTTATAGGTACTAA+GGG | - | chr2_3:47838464-47838483 | None:intergenic | 20.0% |
| !! | AACAATAGAAACTAAGTTAA+AGG | + | chr2_3:47838495-47838514 | Msa0295290:CDS | 20.0% |
| !! | AATTATATGAAGATCGTAAA+GGG | - | chr2_3:47838585-47838604 | None:intergenic | 20.0% |
| !! | AAATTATATGAAGATCGTAA+AGG | - | chr2_3:47838586-47838605 | None:intergenic | 20.0% |
| !! | ATACAACAAAACAAAACTTA+CGG | - | chr2_3:47838708-47838727 | None:intergenic | 20.0% |
| !! | GTAAGTTAATAATGAAAACA+AGG | - | chr2_3:47838742-47838761 | None:intergenic | 20.0% |
| !! | CTGTAAAAACAAATTCTTAT+GGG | - | chr2_3:47839190-47839209 | None:intergenic | 20.0% |
| !! | TCTGTAAAAACAAATTCTTA+TGG | - | chr2_3:47839191-47839210 | None:intergenic | 20.0% |
| !!! | AGAATTTGTTTTTACAGAAA+TGG | + | chr2_3:47839193-47839212 | Msa0295290:intron | 20.0% |
| !! | ATTAGAATAACAGTAATCTA+TGG | + | chr2_3:47839886-47839905 | Msa0295290:intron | 20.0% |
| !!! | TGGAAATTTGATAGTATTTT+TGG | + | chr2_3:47839906-47839925 | Msa0295290:intron | 20.0% |
| !!! | ACTTTTATAGAAAATACCAA+GGG | - | chr2_3:47840421-47840440 | None:intergenic | 20.0% |
| !!! | AACTTTTATAGAAAATACCA+AGG | - | chr2_3:47840422-47840441 | None:intergenic | 20.0% |
| !!! | GGTATTTTCTATAAAAGTTT+TGG | + | chr2_3:47840423-47840442 | Msa0295290:intron | 20.0% |
| !! | TTAAAAGTGAAAATCGAAAT+TGG | + | chr2_3:47842052-47842071 | Msa0295290:intron | 20.0% |
| !!! | AATTTGTTTCCTTTTATCAA+AGG | - | chr2_3:47842122-47842141 | None:intergenic | 20.0% |
| !! | TTTATTTCAAAGAACAAATG+AGG | - | chr2_3:47842263-47842282 | None:intergenic | 20.0% |
| !!! | TTTTGGTTACTTTTTTAACT+CGG | + | chr2_3:47842571-47842590 | Msa0295290:three_prime_UTR | 20.0% |
| !! | TACAATTAAAACATAAAAGG+AGG | - | chr2_3:47842679-47842698 | None:intergenic | 20.0% |
| ! | AGCCAAATACAAAAATGAAA+AGG | - | chr2_3:47837171-47837190 | None:intergenic | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr2_3:47837550-47837569 | None:intergenic | 25.0% |
| ! | AGATTTAGAGATTAATGAGT+TGG | + | chr2_3:47837579-47837598 | Msa0295290:intron | 25.0% |
| !! | TAATGAGTTGGATCAAAATA+TGG | + | chr2_3:47837591-47837610 | Msa0295290:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+CGG | + | chr2_3:47837611-47837630 | Msa0295290:intron | 25.0% |
| ! | CTAGTTTAATATATATGCAC+AGG | - | chr2_3:47838269-47838288 | None:intergenic | 25.0% |
| ! | TATCTAATCTGTATGTTTCA+TGG | + | chr2_3:47838367-47838386 | Msa0295290:intron | 25.0% |
| ! | CTATAACTTTATAGGTACTA+AGG | - | chr2_3:47838465-47838484 | None:intergenic | 25.0% |
| ! | CTTAGTACCTATAAAGTTAT+AGG | + | chr2_3:47838463-47838482 | Msa0295290:CDS | 25.0% |
| ! | TAGGCATAAAAATTCATTCA+GGG | + | chr2_3:47838546-47838565 | Msa0295290:CDS | 25.0% |
| ! | ATTATATGAAGATCGTAAAG+GGG | - | chr2_3:47838584-47838603 | None:intergenic | 25.0% |
| ! | CGATCTTCATATAATTTGAA+AGG | + | chr2_3:47838589-47838608 | Msa0295290:CDS | 25.0% |
| ! | GTCATAAATTGTACCAAATA+TGG | - | chr2_3:47839569-47839588 | None:intergenic | 25.0% |
| ! | TCATCAATGAACATATAGAA+AGG | - | chr2_3:47839720-47839739 | None:intergenic | 25.0% |
| ! | AGTGTGTAACTTATTATGTA+TGG | + | chr2_3:47839986-47840005 | Msa0295290:intron | 25.0% |
| ! | CATCAATCCAAATTGAATAT+CGG | - | chr2_3:47840087-47840106 | None:intergenic | 25.0% |
| ! | GATATTCAATTTGGATTGAT+GGG | + | chr2_3:47840086-47840105 | Msa0295290:CDS | 25.0% |
| ! | ACCTTTCAAGAATTTGATAT+GGG | - | chr2_3:47840132-47840151 | None:intergenic | 25.0% |
| ! | TACCTTTCAAGAATTTGATA+TGG | - | chr2_3:47840133-47840152 | None:intergenic | 25.0% |
| ! | TCAAATTCTTGAAAGGTAAA+AGG | + | chr2_3:47840135-47840154 | Msa0295290:intron | 25.0% |
| ! | AAATAAACCCTCTAATTGTA+TGG | - | chr2_3:47840285-47840304 | None:intergenic | 25.0% |
| ! | GTGTAATATTTCTTAGTTAG+TGG | - | chr2_3:47840672-47840691 | None:intergenic | 25.0% |
| ! | GTAATAAATAGGACAGTTAA+AGG | + | chr2_3:47840795-47840814 | Msa0295290:intron | 25.0% |
| ! | AAAGGAAAAATAGTTTAGTC+AGG | + | chr2_3:47840813-47840832 | Msa0295290:intron | 25.0% |
| !! | AAAATAGTTTAGTCAGGTTT+TGG | + | chr2_3:47840819-47840838 | Msa0295290:intron | 25.0% |
| !!! | GGTATTGATAAAATTGAACT+TGG | - | chr2_3:47841301-47841320 | None:intergenic | 25.0% |
| !! | AAATAATGGCAAAAGTTGAT+TGG | + | chr2_3:47841616-47841635 | Msa0295290:CDS | 25.0% |
| ! | AGAAAACAATTTCTCAAATC+GGG | - | chr2_3:47841899-47841918 | None:intergenic | 25.0% |
| ! | CAGAAAACAATTTCTCAAAT+CGG | - | chr2_3:47841900-47841919 | None:intergenic | 25.0% |
| ! | ATGTACAAACCTTTGATAAA+AGG | + | chr2_3:47842110-47842129 | Msa0295290:intron | 25.0% |
| ! | AAATGAGGAAAGAAAAAAGA+AGG | - | chr2_3:47842248-47842267 | None:intergenic | 25.0% |
| !!! | TTTGGTTACTTTTTTAACTC+GGG | + | chr2_3:47842572-47842591 | Msa0295290:three_prime_UTR | 25.0% |
| GGTAAAAATGGAAACTTGAT+CGG | - | chr2_3:47836676-47836695 | None:intergenic | 30.0% | |
| !! | AATGATTTCGGATTTTGAGT+GGG | - | chr2_3:47836706-47836725 | None:intergenic | 30.0% |
| TTGAAATCAAATGTAGCTTC+TGG | + | chr2_3:47836748-47836767 | Msa0295290:five_prime_UTR | 30.0% | |
| TGAAATCAAATGTAGCTTCT+GGG | + | chr2_3:47836749-47836768 | Msa0295290:five_prime_UTR | 30.0% | |
| ! | AGATTTGATTGTTGTTACAG+TGG | + | chr2_3:47836894-47836913 | Msa0295290:five_prime_UTR | 30.0% |
| GAAAAGGAGATGAAATTGAA+AGG | + | chr2_3:47836930-47836949 | Msa0295290:five_prime_UTR | 30.0% | |
| TTGTATATTTGTCGTCATCT+TGG | + | chr2_3:47837106-47837125 | Msa0295290:CDS | 30.0% | |
| !! | GGCCTTTTCATTTTTGTATT+TGG | + | chr2_3:47837166-47837185 | Msa0295290:CDS | 30.0% |
| TATAGCCACTATATGTAGTA+AGG | + | chr2_3:47837476-47837495 | Msa0295290:intron | 30.0% | |
| !!! | GGTTAGTACTGATTTTATGA+AGG | + | chr2_3:47837870-47837889 | Msa0295290:intron | 30.0% |
| GACGAACATAAAACATCTAT+GGG | - | chr2_3:47837985-47838004 | None:intergenic | 30.0% | |
| !! | TCGTCGAGATATTTTAGAAA+TGG | + | chr2_3:47838000-47838019 | Msa0295290:intron | 30.0% |
| !! | CGTCGAGATATTTTAGAAAT+GGG | + | chr2_3:47838001-47838020 | Msa0295290:intron | 30.0% |
| AAACCAATCATATCTCATCA+TGG | - | chr2_3:47838235-47838254 | None:intergenic | 30.0% | |
| TCGTGTATCTTCAATTTCAT+TGG | - | chr2_3:47838434-47838453 | None:intergenic | 30.0% | |
| ATCAACGCCTATAACTTTAT+AGG | - | chr2_3:47838473-47838492 | None:intergenic | 30.0% | |
| !! | TATAAAGTTATAGGCGTTGA+TGG | + | chr2_3:47838472-47838491 | Msa0295290:CDS | 30.0% |
| GTAGGCATAAAAATTCATTC+AGG | + | chr2_3:47838545-47838564 | Msa0295290:CDS | 30.0% | |
| AAATTCTTATGGGACACTAA+TGG | - | chr2_3:47839180-47839199 | None:intergenic | 30.0% | |
| TGTCTCTACTTCATCAAATT+GGG | - | chr2_3:47839307-47839326 | None:intergenic | 30.0% | |
| ATGTCTCTACTTCATCAAAT+TGG | - | chr2_3:47839308-47839327 | None:intergenic | 30.0% | |
| TGTGTGTCAAATGTGATAAA+AGG | - | chr2_3:47839435-47839454 | None:intergenic | 30.0% | |
| ACTCTTGACAGATTTGTAAA+AGG | + | chr2_3:47839454-47839473 | Msa0295290:intron | 30.0% | |
| GGACAAAACAATATGTAGAT+CGG | - | chr2_3:47839597-47839616 | None:intergenic | 30.0% | |
| CAATGAGAAACAGAAAACAA+AGG | - | chr2_3:47839618-47839637 | None:intergenic | 30.0% | |
| TGTATTACATCATAGTTTCC+TGG | - | chr2_3:47839657-47839676 | None:intergenic | 30.0% | |
| ! | TATGAGAAATGCCAGTATTT+TGG | + | chr2_3:47839755-47839774 | Msa0295290:CDS | 30.0% |
| GTGGCATGATATTAGAAATA+GGG | - | chr2_3:47839939-47839958 | None:intergenic | 30.0% | |
| TATCGTACTCATTATATCGT+AGG | - | chr2_3:47839961-47839980 | None:intergenic | 30.0% | |
| ! | ATTCTGTGCAAAAGAAGTTT+TGG | - | chr2_3:47840052-47840071 | None:intergenic | 30.0% |
| AAATTGAATATCGGATGTTG+GGG | - | chr2_3:47840078-47840097 | None:intergenic | 30.0% | |
| CAAATTGAATATCGGATGTT+GGG | - | chr2_3:47840079-47840098 | None:intergenic | 30.0% | |
| CGATATTCAATTTGGATTGA+TGG | + | chr2_3:47840085-47840104 | Msa0295290:CDS | 30.0% | |
| ACCCATATCAAATTCTTGAA+AGG | + | chr2_3:47840128-47840147 | Msa0295290:CDS | 30.0% | |
| AAAATCAGCCATACAATTAG+AGG | + | chr2_3:47840274-47840293 | Msa0295290:intron | 30.0% | |
| AAATCAGCCATACAATTAGA+GGG | + | chr2_3:47840275-47840294 | Msa0295290:intron | 30.0% | |
| TAAAAACATGCAAATCCATG+CGG | - | chr2_3:47840332-47840351 | None:intergenic | 30.0% | |
| AACTTGAAACCAAATTGCAA+GGG | - | chr2_3:47840390-47840409 | None:intergenic | 30.0% | |
| AAACTTGAAACCAAATTGCA+AGG | - | chr2_3:47840391-47840410 | None:intergenic | 30.0% | |
| !! | AATATGTAGCCCTTAGTTTT+TGG | + | chr2_3:47840510-47840529 | Msa0295290:intron | 30.0% |
| TATAGTGCACCAAAAACTAA+GGG | - | chr2_3:47840522-47840541 | None:intergenic | 30.0% | |
| ATATAGTGCACCAAAAACTA+AGG | - | chr2_3:47840523-47840542 | None:intergenic | 30.0% | |
| TTTCTTAGTTAGTGGTCTAA+CGG | - | chr2_3:47840664-47840683 | None:intergenic | 30.0% | |
| !! | TTTTGGTTAAGGAATTGGAA+TGG | + | chr2_3:47840836-47840855 | Msa0295290:intron | 30.0% |
| ATAGGAAATTTCAAGAGACA+GGG | - | chr2_3:47840913-47840932 | None:intergenic | 30.0% | |
| ATTACTGTTGACAAATGACA+GGG | - | chr2_3:47841099-47841118 | None:intergenic | 30.0% | |
| AATTACTGTTGACAAATGAC+AGG | - | chr2_3:47841100-47841119 | None:intergenic | 30.0% | |
| AAATGGCAAAAGTAGCATTT+GGG | - | chr2_3:47841193-47841212 | None:intergenic | 30.0% | |
| ! | CAATTTTATCAATACCACGA+TGG | + | chr2_3:47841305-47841324 | Msa0295290:CDS | 30.0% |
| AATAATGAGTTAAACCATCG+TGG | - | chr2_3:47841322-47841341 | None:intergenic | 30.0% | |
| ATGGTTTAACTCATTATTCC+AGG | + | chr2_3:47841324-47841343 | Msa0295290:CDS | 30.0% | |
| TGGTTTAACTCATTATTCCA+GGG | + | chr2_3:47841325-47841344 | Msa0295290:CDS | 30.0% | |
| TTGTTCTTACCACTAGTTAT+AGG | - | chr2_3:47841359-47841378 | None:intergenic | 30.0% | |
| GCAAAATAGGTTATTATGTG+CGG | + | chr2_3:47841404-47841423 | Msa0295290:intron | 30.0% | |
| CAGGTAAACAGATTTGTAAT+TGG | - | chr2_3:47841528-47841547 | None:intergenic | 30.0% | |
| ! | TTGGAGTATCAATATGTTTC+TGG | + | chr2_3:47841635-47841654 | Msa0295290:CDS | 30.0% |
| ATAAGTGTTTCAGAGATCTT+TGG | + | chr2_3:47841764-47841783 | Msa0295290:intron | 30.0% | |
| TAAGTGTTTCAGAGATCTTT+GGG | + | chr2_3:47841765-47841784 | Msa0295290:intron | 30.0% | |
| AATTAGCCAAAATCTCATGA+GGG | - | chr2_3:47842165-47842184 | None:intergenic | 30.0% | |
| AAAAAGTAACCAAAACCTCA+AGG | - | chr2_3:47842566-47842585 | None:intergenic | 30.0% | |
| !!! | TTGGTTACTTTTTTAACTCG+GGG | + | chr2_3:47842573-47842592 | Msa0295290:three_prime_UTR | 30.0% |
| AATCAGAGAATTGGGGAATT+GGG | - | chr2_3:47836563-47836582 | None:intergenic | 35.0% | |
| AATCGGAGAATCAGAGAATT+GGG | - | chr2_3:47836571-47836590 | None:intergenic | 35.0% | |
| GAAATCAATGAACGGAATCT+CGG | - | chr2_3:47836607-47836626 | None:intergenic | 35.0% | |
| GTGAAGAGGAAATCAATGAA+CGG | - | chr2_3:47836615-47836634 | None:intergenic | 35.0% | |
| !! | ATGATTTCGGATTTTGAGTG+GGG | - | chr2_3:47836705-47836724 | None:intergenic | 35.0% |
| ! | GAATGATTTCGGATTTTGAG+TGG | - | chr2_3:47836707-47836726 | None:intergenic | 35.0% |
| TCAAAATCCGAAATCATTCG+TGG | + | chr2_3:47836708-47836727 | Msa0295290:five_prime_UTR | 35.0% | |
| CAAAATCCGAAATCATTCGT+GGG | + | chr2_3:47836709-47836728 | Msa0295290:five_prime_UTR | 35.0% | |
| TTGATTTCAAGCGATGAGAA+GGG | - | chr2_3:47836738-47836757 | None:intergenic | 35.0% | |
| ! | TTTGATTTCAAGCGATGAGA+AGG | - | chr2_3:47836739-47836758 | None:intergenic | 35.0% |
| GAAATCAAATGTAGCTTCTG+GGG | + | chr2_3:47836750-47836769 | Msa0295290:five_prime_UTR | 35.0% | |
| ! | TTTGATTGTTGTTACAGTGG+TGG | + | chr2_3:47836897-47836916 | Msa0295290:five_prime_UTR | 35.0% |
| ! | TTGATTGTTGTTACAGTGGT+GGG | + | chr2_3:47836898-47836917 | Msa0295290:five_prime_UTR | 35.0% |
| ! | TCTCTGCAGTTGATTCAAAA+CGG | + | chr2_3:47837001-47837020 | Msa0295290:CDS | 35.0% |
| !! | CTTTCTCTTTGGGGTTATAA+AGG | - | chr2_3:47837075-47837094 | None:intergenic | 35.0% |
| ! | TATCGGTTGTTGTTAAGTAG+TGG | + | chr2_3:47837314-47837333 | Msa0295290:intron | 35.0% |
| ACTCTCCTTACTACATATAG+TGG | - | chr2_3:47837484-47837503 | None:intergenic | 35.0% | |
| ! | AAGTCTTATCCCACTAAATG+GGG | - | chr2_3:47837660-47837679 | None:intergenic | 35.0% |
| ! | CAAGTCTTATCCCACTAAAT+GGG | - | chr2_3:47837661-47837680 | None:intergenic | 35.0% |
| TTGCTACATAGATGTGGATT+TGG | + | chr2_3:47837778-47837797 | Msa0295290:intron | 35.0% | |
| !! | TCTACCATTGATTCAACATC+GGG | - | chr2_3:47837846-47837865 | None:intergenic | 35.0% |
| !! | CTCTACCATTGATTCAACAT+CGG | - | chr2_3:47837847-47837866 | None:intergenic | 35.0% |
| GTTGAATCAATGGTAGAGAT+TGG | + | chr2_3:47837849-47837868 | Msa0295290:intron | 35.0% | |
| !! | CTCAGTCATTGATTTGAGAT+TGG | - | chr2_3:47837911-47837930 | None:intergenic | 35.0% |
| TCTAATACTACGTGTAACTG+CGG | + | chr2_3:47837932-47837951 | Msa0295290:intron | 35.0% | |
| CGACGAACATAAAACATCTA+TGG | - | chr2_3:47837986-47838005 | None:intergenic | 35.0% | |
| ACACCATGATGAGATATGAT+TGG | + | chr2_3:47838229-47838248 | Msa0295290:intron | 35.0% | |
| ! | TATGTTTCATGGTGTGCTTT+TGG | + | chr2_3:47838378-47838397 | Msa0295290:intron | 35.0% |
| !! | TTGGTGTTGTGTTGAACTAT+AGG | + | chr2_3:47838397-47838416 | Msa0295290:intron | 35.0% |
| CATCAAAATCAAATCCAGTC+TGG | - | chr2_3:47839495-47839514 | None:intergenic | 35.0% | |
| !! | GACTGGATTTGATTTTGATG+AGG | + | chr2_3:47839495-47839514 | Msa0295290:CDS | 35.0% |
| CAGATGCAACAATGATATCA+TGG | - | chr2_3:47839546-47839565 | None:intergenic | 35.0% | |
| ATTGTTGCATCTGCCATATT+TGG | + | chr2_3:47839553-47839572 | Msa0295290:CDS | 35.0% | |
| TATGGAGAATCATTGTTGTC+CGG | + | chr2_3:47839799-47839818 | Msa0295290:CDS | 35.0% | |
| AATCAGCGTATGGAATATTC+CGG | - | chr2_3:47839821-47839840 | None:intergenic | 35.0% | |
| !! | ATATTCCATACGCTGATTCT+AGG | + | chr2_3:47839823-47839842 | Msa0295290:CDS | 35.0% |
| GGTGGCATGATATTAGAAAT+AGG | - | chr2_3:47839940-47839959 | None:intergenic | 35.0% | |
| ! | GAGGCATCATAATTCATAAG+AGG | - | chr2_3:47840012-47840031 | None:intergenic | 35.0% |
| GGAATCTGCAATAAGTTTAG+AGG | - | chr2_3:47840031-47840050 | None:intergenic | 35.0% | |
| CCAAATTGAATATCGGATGT+TGG | - | chr2_3:47840080-47840099 | None:intergenic | 35.0% | |
| CCAACATCCGATATTCAATT+TGG | + | chr2_3:47840077-47840096 | Msa0295290:CDS | 35.0% | |
| ! | TTGCTAAATGATTTTCCGCA+TGG | + | chr2_3:47840314-47840333 | Msa0295290:intron | 35.0% |
| ACTTAGCAAAGTTACCTAGA+AGG | + | chr2_3:47840556-47840575 | Msa0295290:intron | 35.0% | |
| TTACACTAAGAGACCTAAAC+AGG | + | chr2_3:47840686-47840705 | Msa0295290:intron | 35.0% | |
| !!! | GTTTAGTCAGGTTTTGGTTA+AGG | + | chr2_3:47840825-47840844 | Msa0295290:intron | 35.0% |
| !!! | TCAGGTTTTGGTTAAGGAAT+TGG | + | chr2_3:47840831-47840850 | Msa0295290:intron | 35.0% |
| GATTCCATGCTTTCAAAACT+TGG | + | chr2_3:47840862-47840881 | Msa0295290:intron | 35.0% | |
| CATGCTTTCAAAACTTGGAA+GGG | + | chr2_3:47840867-47840886 | Msa0295290:intron | 35.0% | |
| CATAGGAAATTTCAAGAGAC+AGG | - | chr2_3:47840914-47840933 | None:intergenic | 35.0% | |
| TTGTAAACATAGACCTCATG+AGG | + | chr2_3:47841053-47841072 | Msa0295290:intron | 35.0% | |
| CTGGATGATATAAAAGAGAG+TGG | - | chr2_3:47841158-47841177 | None:intergenic | 35.0% | |
| ! | CACTCTCTTTTATATCATCC+AGG | + | chr2_3:47841156-47841175 | Msa0295290:intron | 35.0% |
| TTATATCATCCAGGTTCTTG+TGG | + | chr2_3:47841165-47841184 | Msa0295290:intron | 35.0% | |
| GAAATGGCAAAAGTAGCATT+TGG | - | chr2_3:47841194-47841213 | None:intergenic | 35.0% | |
| AAATTGAACTTGGCGATCAA+TGG | - | chr2_3:47841291-47841310 | None:intergenic | 35.0% | |
| ! | ATAACCTATTTTGCACACAC+AGG | - | chr2_3:47841398-47841417 | None:intergenic | 35.0% |
| CTAATGATAACACAACCTTC+AGG | - | chr2_3:47841495-47841514 | None:intergenic | 35.0% | |
| CAAATCTGTTTACCTGCTTA+TGG | + | chr2_3:47841532-47841551 | Msa0295290:CDS | 35.0% | |
| AACTTCATTGAACCATAAGC+AGG | - | chr2_3:47841547-47841566 | None:intergenic | 35.0% | |
| ! | ACTGATCTCTAGAAGTAAAG+CGG | - | chr2_3:47841572-47841591 | None:intergenic | 35.0% |
| ! | AGATCAGTTAAGCTTTTCCA+CGG | + | chr2_3:47841584-47841603 | Msa0295290:CDS | 35.0% |
| !! | CATTATTTTGTCTCTTACCG+TGG | - | chr2_3:47841604-47841623 | None:intergenic | 35.0% |
| CACGGTAAGAGACAAAATAA+TGG | + | chr2_3:47841602-47841621 | Msa0295290:CDS | 35.0% | |
| !! | ATATGTTTCTGGATTGTGAG+AGG | + | chr2_3:47841646-47841665 | Msa0295290:CDS | 35.0% |
| CCAAACTGAACACAGAAAAA+TGG | - | chr2_3:47841708-47841727 | None:intergenic | 35.0% | |
| !! | CCATTTTTCTGTGTTCAGTT+TGG | + | chr2_3:47841705-47841724 | Msa0295290:intron | 35.0% |
| AAGTGTTTCAGAGATCTTTG+GGG | + | chr2_3:47841766-47841785 | Msa0295290:intron | 35.0% | |
| CAGTGATTCAATAGAACTGA+GGG | - | chr2_3:47841841-47841860 | None:intergenic | 35.0% | |
| TCAGTGATTCAATAGAACTG+AGG | - | chr2_3:47841842-47841861 | None:intergenic | 35.0% | |
| TGAATCACTGAACATTGTGA+AGG | + | chr2_3:47841851-47841870 | Msa0295290:intron | 35.0% | |
| AAACAATTTCTCAAATCGGG+TGG | - | chr2_3:47841896-47841915 | None:intergenic | 35.0% | |
| TGAACATTTGTACGTGAAAC+AGG | + | chr2_3:47841973-47841992 | Msa0295290:intron | 35.0% | |
| CAGAGTTGTACAGAAAATAG+TGG | - | chr2_3:47842009-47842028 | None:intergenic | 35.0% | |
| ! | TCTGTACAACTCTGAAAACA+AGG | + | chr2_3:47842015-47842034 | Msa0295290:intron | 35.0% |
| ! | ATTTTCCCCTCATGAGATTT+TGG | + | chr2_3:47842156-47842175 | Msa0295290:intron | 35.0% |
| ATTAGCCAAAATCTCATGAG+GGG | - | chr2_3:47842164-47842183 | None:intergenic | 35.0% | |
| GAATTAGCCAAAATCTCATG+AGG | - | chr2_3:47842166-47842185 | None:intergenic | 35.0% | |
| GAGGAAAGAAAAAAGAAGGT+TGG | - | chr2_3:47842244-47842263 | None:intergenic | 35.0% | |
| TTGTTAGTAGTATAGGGAAC+AGG | - | chr2_3:47842420-47842439 | None:intergenic | 35.0% | |
| !! | AGAGGCTTGTTAGTAGTATA+GGG | - | chr2_3:47842426-47842445 | None:intergenic | 35.0% |
| ! | ATCTTTTCTCCTTGAGGTTT+TGG | + | chr2_3:47842554-47842573 | Msa0295290:three_prime_UTR | 35.0% |
| GAATCAGAGAATTGGGGAAT+TGG | - | chr2_3:47836564-47836583 | None:intergenic | 40.0% | |
| ATCGGAGAATCAGAGAATTG+GGG | - | chr2_3:47836570-47836589 | None:intergenic | 40.0% | |
| GAATCGGAGAATCAGAGAAT+TGG | - | chr2_3:47836572-47836591 | None:intergenic | 40.0% | |
| TTGATCGGAAAAGAGGAAGT+GGG | - | chr2_3:47836661-47836680 | None:intergenic | 40.0% | |
| TGGAAACTTGATCGGAAAAG+AGG | - | chr2_3:47836668-47836687 | None:intergenic | 40.0% | |
| ATTGAAAGGAGAGAGATGAC+TGG | + | chr2_3:47836944-47836963 | Msa0295290:exon | 40.0% | |
| ATAACCCCAAAGAGAAAGAG+AGG | + | chr2_3:47837077-47837096 | Msa0295290:CDS | 40.0% | |
| AACTCCTCTCTTTCTCTTTG+GGG | - | chr2_3:47837084-47837103 | None:intergenic | 40.0% | |
| CAACTCCTCTCTTTCTCTTT+GGG | - | chr2_3:47837085-47837104 | None:intergenic | 40.0% | |
| ACAACTCCTCTCTTTCTCTT+TGG | - | chr2_3:47837086-47837105 | None:intergenic | 40.0% | |
| ATGCTTCTCATGCTTCTTTG+TGG | + | chr2_3:47837145-47837164 | Msa0295290:CDS | 40.0% | |
| ! | GGCTGCTTTACACTTTACAA+AGG | + | chr2_3:47837187-47837206 | Msa0295290:CDS | 40.0% |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr2_3:47837376-47837395 | Msa0295290:intron | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr2_3:47837376-47837395 | Msa0295290:intron | 40.0% | |
| ATGGAGGATAGTTAGATCAC+TGG | + | chr2_3:47837511-47837530 | Msa0295290:intron | 40.0% | |
| AGTTAGATCACTGGATGTAG+AGG | + | chr2_3:47837520-47837539 | Msa0295290:intron | 40.0% | |
| ! | CCAAGTCTTATCCCACTAAA+TGG | - | chr2_3:47837662-47837681 | None:intergenic | 40.0% |
| CCATTTAGTGGGATAAGACT+TGG | + | chr2_3:47837659-47837678 | Msa0295290:intron | 40.0% | |
| ACGATCAATGTTGTCAATCG+CGG | - | chr2_3:47837755-47837774 | None:intergenic | 40.0% | |
| CGTATCTTGCTACATAGATG+TGG | + | chr2_3:47837772-47837791 | Msa0295290:intron | 40.0% | |
| AATGTTATCTTGTGCCCTCA+AGG | + | chr2_3:47838025-47838044 | Msa0295290:intron | 40.0% | |
| !! | CTTCTTAACTTGTGCCTTGA+GGG | - | chr2_3:47838042-47838061 | None:intergenic | 40.0% |
| ATTCTTAACATGTGCCCTGA+GGG | + | chr2_3:47838164-47838183 | Msa0295290:intron | 40.0% | |
| GTGTTGTGTTGAACTATAGG+TGG | + | chr2_3:47838400-47838419 | Msa0295290:intron | 40.0% | |
| AAAAGGATCTTCCTCTACTG+TGG | + | chr2_3:47838615-47838634 | Msa0295290:CDS | 40.0% | |
| AAAGGATCTTCCTCTACTGT+GGG | + | chr2_3:47838616-47838635 | Msa0295290:CDS | 40.0% | |
| ACAAAACAAAACTTACGGCG+TGG | - | chr2_3:47838703-47838722 | None:intergenic | 40.0% | |
| TATGTTTCCAAGTGAACCAG+AGG | + | chr2_3:47838988-47839007 | Msa0295290:CDS | 40.0% | |
| ATGTTTCCAAGTGAACCAGA+GGG | + | chr2_3:47838989-47839008 | Msa0295290:CDS | 40.0% | |
| ! | AGACCATGAAAGTGCATTGT+GGG | + | chr2_3:47839074-47839093 | Msa0295290:CDS | 40.0% |
| TAACCCACAATGCACTTTCA+TGG | - | chr2_3:47839080-47839099 | None:intergenic | 40.0% | |
| TTCTTGCAGTGACTGTATCT+CGG | + | chr2_3:47839233-47839252 | Msa0295290:intron | 40.0% | |
| CCGTTGAACGAAGATCAAAT+GGG | - | chr2_3:47839333-47839352 | None:intergenic | 40.0% | |
| CCCATTTGATCTTCGTTCAA+CGG | + | chr2_3:47839330-47839349 | Msa0295290:intron | 40.0% | |
| ACCGTTGAACGAAGATCAAA+TGG | - | chr2_3:47839334-47839353 | None:intergenic | 40.0% | |
| TTCGTTCAACGGTTTAGATG+TGG | + | chr2_3:47839341-47839360 | Msa0295290:intron | 40.0% | |
| TTTGTAAAAGGAAGCAGACC+TGG | + | chr2_3:47839466-47839485 | Msa0295290:CDS | 40.0% | |
| TTGTAAAAGGAAGCAGACCT+GGG | + | chr2_3:47839467-47839486 | Msa0295290:CDS | 40.0% | |
| GCTTGTTTACTGATGTTCCT+GGG | - | chr2_3:47839684-47839703 | None:intergenic | 40.0% | |
| TGCTTGTTTACTGATGTTCC+TGG | - | chr2_3:47839685-47839704 | None:intergenic | 40.0% | |
| GGAACATCAGTAAACAAGCA+AGG | + | chr2_3:47839685-47839704 | Msa0295290:CDS | 40.0% | |
| !! | ATGCCAGTATTTTGGATAGC+AGG | + | chr2_3:47839763-47839782 | Msa0295290:CDS | 40.0% |
| ! | TGATTCTAGGCGTAATGGAA+AGG | + | chr2_3:47839836-47839855 | Msa0295290:CDS | 40.0% |
| CGTACTCATTATATCGTAGG+TGG | - | chr2_3:47839958-47839977 | None:intergenic | 40.0% | |
| TATTCCTGTTGTACGTAGAG+TGG | + | chr2_3:47840181-47840200 | Msa0295290:intron | 40.0% | |
| ATTCCTGTTGTACGTAGAGT+GGG | + | chr2_3:47840182-47840201 | Msa0295290:intron | 40.0% | |
| TCACTCAATGAAAGCCTTCT+AGG | - | chr2_3:47840573-47840592 | None:intergenic | 40.0% | |
| GTGAAGAACTGCTTACTCTA+AGG | + | chr2_3:47840612-47840631 | Msa0295290:intron | 40.0% | |
| TCGCACAATAACTATCCCAA+GGG | - | chr2_3:47840723-47840742 | None:intergenic | 40.0% | |
| ATCGCACAATAACTATCCCA+AGG | - | chr2_3:47840724-47840743 | None:intergenic | 40.0% | |
| !!! | CCTTCCAAGTTTTGAAAGCA+TGG | - | chr2_3:47840869-47840888 | None:intergenic | 40.0% |
| CCATGCTTTCAAAACTTGGA+AGG | + | chr2_3:47840866-47840885 | Msa0295290:intron | 40.0% | |
| GACAGGGATGACATAATGTT+TGG | - | chr2_3:47840897-47840916 | None:intergenic | 40.0% | |
| CACATGCAACAACACAACAT+AGG | - | chr2_3:47840931-47840950 | None:intergenic | 40.0% | |
| TGTTGATACACTGTCTCAGA+GGG | + | chr2_3:47840975-47840994 | Msa0295290:intron | 40.0% | |
| GCGTCTATAGTGTCTTGAAA+TGG | - | chr2_3:47841210-47841229 | None:intergenic | 40.0% | |
| GCTAAGCTTCCTATAACTAG+TGG | + | chr2_3:47841347-47841366 | Msa0295290:CDS | 40.0% | |
| ! | GGAGTATTATATGCAACCAC+AGG | - | chr2_3:47841439-47841458 | None:intergenic | 40.0% |
| GAGGCGTAACTTTGTAATAC+AGG | + | chr2_3:47841665-47841684 | Msa0295290:CDS | 40.0% | |
| GGTTTGTGATAAACAATGCC+AGG | + | chr2_3:47842299-47842318 | Msa0295290:intron | 40.0% | |
| TGTTCTCCAATACGTCTCTA+TGG | - | chr2_3:47842329-47842348 | None:intergenic | 40.0% | |
| CTCGTCCAGTTGTTGTAATT+CGG | + | chr2_3:47842379-47842398 | Msa0295290:CDS | 40.0% | |
| TTAGTAGTATAGGGAACAGG+TGG | - | chr2_3:47842417-47842436 | None:intergenic | 40.0% | |
| !! | CAGAGGCTTGTTAGTAGTAT+AGG | - | chr2_3:47842427-47842446 | None:intergenic | 40.0% |
| CTATACTACTAACAAGCCTC+TGG | + | chr2_3:47842425-47842444 | Msa0295290:CDS | 40.0% | |
| ! | GTCTTGATCTTTTCTCCTTG+AGG | + | chr2_3:47842548-47842567 | Msa0295290:exon | 40.0% |
| !! | AGGAGGCAGCATTTTTGAAA+TGG | - | chr2_3:47842662-47842681 | None:intergenic | 40.0% |
| TGAATGGAGGGAAGAGAGAA+TGG | - | chr2_3:47836501-47836520 | None:intergenic | 45.0% | |
| !! | ATGGAGATGGTGATGGATTG+AGG | - | chr2_3:47836531-47836550 | None:intergenic | 45.0% |
| ATGGAAGATGGAGATGGTGA+TGG | - | chr2_3:47836538-47836557 | None:intergenic | 45.0% | |
| AGAATTGGGGAATTGGGAGA+TGG | - | chr2_3:47836557-47836576 | None:intergenic | 45.0% | |
| ATCAATGAACGGAATCTCGG+CGG | - | chr2_3:47836604-47836623 | None:intergenic | 45.0% | |
| CTTGATCGGAAAAGAGGAAG+TGG | - | chr2_3:47836662-47836681 | None:intergenic | 45.0% | |
| !! | ATTTCGGATTTTGAGTGGGG+TGG | - | chr2_3:47836702-47836721 | None:intergenic | 45.0% |
| GGGAAACCCACGAATGATTT+CGG | - | chr2_3:47836718-47836737 | None:intergenic | 45.0% | |
| !! | TGTTACAGTGGTGGGTTTGA+TGG | + | chr2_3:47836906-47836925 | Msa0295290:five_prime_UTR | 45.0% |
| !! | TGGTGGGTTTGATGGTGAAA+AGG | + | chr2_3:47836914-47836933 | Msa0295290:five_prime_UTR | 45.0% |
| ! | AGAGATGACTGGAGTGTCAT+TGG | + | chr2_3:47836955-47836974 | Msa0295290:exon | 45.0% |
| ! | GAGATGACTGGAGTGTCATT+GGG | + | chr2_3:47836956-47836975 | Msa0295290:exon | 45.0% |
| TCAAAACGGTAACGTTTCGC+AGG | + | chr2_3:47837015-47837034 | Msa0295290:CDS | 45.0% | |
| ATTTGTCGTCATCTTGGTCG+TGG | + | chr2_3:47837112-47837131 | Msa0295290:CDS | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr2_3:47837379-47837398 | Msa0295290:intron | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr2_3:47837379-47837398 | Msa0295290:intron | 45.0% | |
| CTTATCCCACTAAATGGGGT+CGG | - | chr2_3:47837656-47837675 | None:intergenic | 45.0% | |
| ATTGCACGCAGTTACTGTTG+CGG | + | chr2_3:47837801-47837820 | Msa0295290:intron | 45.0% | |
| !! | ACCATTGATTCAACATCGGG+CGG | - | chr2_3:47837843-47837862 | None:intergenic | 45.0% |
| TGATCCCCTGCAGTAGAAAA+AGG | - | chr2_3:47837958-47837977 | None:intergenic | 45.0% | |
| ! | TTTTCTACTGCAGGGGATCA+TGG | + | chr2_3:47837958-47837977 | Msa0295290:intron | 45.0% |
| !! | GCTTCTTAACTTGTGCCTTG+AGG | - | chr2_3:47838043-47838062 | None:intergenic | 45.0% |
| GATTCTTAACATGTGCCCTG+AGG | + | chr2_3:47838163-47838182 | Msa0295290:intron | 45.0% | |
| AGTGTTATCTTGTGCCCTCA+GGG | - | chr2_3:47838181-47838200 | None:intergenic | 45.0% | |
| TAGTGTTATCTTGTGCCCTC+AGG | - | chr2_3:47838182-47838201 | None:intergenic | 45.0% | |
| CTTCTACGTCGTTGACAAGT+AGG | + | chr2_3:47838527-47838546 | Msa0295290:CDS | 45.0% | |
| GAAGATCGTAAAGGGGAAAC+AGG | - | chr2_3:47838577-47838596 | None:intergenic | 45.0% | |
| GAGGAGGAGGAAATGCAAAA+TGG | - | chr2_3:47838654-47838673 | None:intergenic | 45.0% | |
| TCCTGTGTGCTATATTCCTG+TGG | + | chr2_3:47838886-47838905 | Msa0295290:CDS | 45.0% | |
| TCCACAGGAATATAGCACAC+AGG | - | chr2_3:47838890-47838909 | None:intergenic | 45.0% | |
| AAGTACAGGAGACTCTGATG+GGG | - | chr2_3:47838939-47838958 | None:intergenic | 45.0% | |
| GAAGTACAGGAGACTCTGAT+GGG | - | chr2_3:47838940-47838959 | None:intergenic | 45.0% | |
| ! | TATGTGAGAGTGCGAAGTAC+AGG | - | chr2_3:47838953-47838972 | None:intergenic | 45.0% |
| ! | ATACCCTCCTCTGGAAGAAA+GGG | + | chr2_3:47839030-47839049 | Msa0295290:CDS | 45.0% |
| ! | GAGACCATGAAAGTGCATTG+TGG | + | chr2_3:47839073-47839092 | Msa0295290:CDS | 45.0% |
| AGTGACTGTATCTCGGTTGT+TGG | + | chr2_3:47839240-47839259 | Msa0295290:intron | 45.0% | |
| TGAGGAAGACCTCTTAGAGT+TGG | + | chr2_3:47839513-47839532 | Msa0295290:CDS | 45.0% | |
| !! | GGTACTGATCCAACTCTAAG+AGG | - | chr2_3:47839525-47839544 | None:intergenic | 45.0% |
| GTTTCCTGGCATAGATGTGA+TGG | - | chr2_3:47839643-47839662 | None:intergenic | 45.0% | |
| ATGATGTAATACAGCAGCCC+AGG | + | chr2_3:47839664-47839683 | Msa0295290:CDS | 45.0% | |
| CCTCCTGCTATCCAAAATAC+TGG | - | chr2_3:47839769-47839788 | None:intergenic | 45.0% | |
| !! | CCAGTATTTTGGATAGCAGG+AGG | + | chr2_3:47839766-47839785 | Msa0295290:CDS | 45.0% |
| TTACGCCTAGAATCAGCGTA+TGG | - | chr2_3:47839831-47839850 | None:intergenic | 45.0% | |
| !! | TACGCTGATTCTAGGCGTAA+TGG | + | chr2_3:47839831-47839850 | Msa0295290:CDS | 45.0% |
| TATCCCACTCTACGTACAAC+AGG | - | chr2_3:47840188-47840207 | None:intergenic | 45.0% | |
| ! | TTCAAGTTTGTCTCTGCCCT+TGG | + | chr2_3:47840402-47840421 | Msa0295290:intron | 45.0% |
| !! | TTACTCTAAGGCAGACTGCA+GGG | + | chr2_3:47840624-47840643 | Msa0295290:intron | 45.0% |
| AGACCTAAACAGGTCTGAAC+CGG | + | chr2_3:47840696-47840715 | Msa0295290:intron | 45.0% | |
| CAATAACTATCCCAAGGGAC+CGG | - | chr2_3:47840718-47840737 | None:intergenic | 45.0% | |
| CTGTTGATACACTGTCTCAG+AGG | + | chr2_3:47840974-47840993 | Msa0295290:intron | 45.0% | |
| TCATGAGGCCTCTCCTTATT+GGG | + | chr2_3:47841068-47841087 | Msa0295290:intron | 45.0% | |
| ACGCTTTGATGTCTTTGTCG+AGG | + | chr2_3:47841226-47841245 | Msa0295290:CDS | 45.0% | |
| GCAGAGGCTAATAAAGTTGC+TGG | + | chr2_3:47841248-47841267 | Msa0295290:CDS | 45.0% | |
| AGTTATAGGAAGCTTAGCCC+TGG | - | chr2_3:47841345-47841364 | None:intergenic | 45.0% | |
| CATGCCTGTGTGTGCAAAAT+AGG | + | chr2_3:47841391-47841410 | Msa0295290:intron | 45.0% | |
| ! | GGCACAAGGCACATTTTAGA+TGG | - | chr2_3:47841460-47841479 | None:intergenic | 45.0% |
| TTCTCAAATCGGGTGGACAT+GGG | - | chr2_3:47841889-47841908 | None:intergenic | 45.0% | |
| TTTCTCAAATCGGGTGGACA+TGG | - | chr2_3:47841890-47841909 | None:intergenic | 45.0% | |
| CGAATTACAACAACTGGACG+AGG | - | chr2_3:47842381-47842400 | None:intergenic | 45.0% | |
| CTAGGATTCTTCTTCACCAG+AGG | - | chr2_3:47842444-47842463 | None:intergenic | 45.0% | |
| CTCTGGTGAAGAAGAATCCT+AGG | + | chr2_3:47842442-47842461 | Msa0295290:CDS | 45.0% | |
| TGAGGTGTAGCGTGAATGGA+GGG | - | chr2_3:47836513-47836532 | None:intergenic | 50.0% | |
| TTGAGGTGTAGCGTGAATGG+AGG | - | chr2_3:47836514-47836533 | None:intergenic | 50.0% | |
| GGATTGAGGTGTAGCGTGAA+TGG | - | chr2_3:47836517-47836536 | None:intergenic | 50.0% | |
| TGGGAGATGGAAGATGGAGA+TGG | - | chr2_3:47836544-47836563 | None:intergenic | 50.0% | |
| GGGAATTGGGAGATGGAAGA+TGG | - | chr2_3:47836550-47836569 | None:intergenic | 50.0% | |
| ATTTCCTCTTCACCCTTCCC+CGG | + | chr2_3:47836622-47836641 | Msa0295290:five_prime_UTR | 50.0% | |
| ! | GTGTCATTGGGTCTACGAAC+AGG | + | chr2_3:47836968-47836987 | Msa0295290:CDS | 50.0% |
| GGTCTACGAACAGGTAGCTA+TGG | + | chr2_3:47836977-47836996 | Msa0295290:CDS | 50.0% | |
| GAAGCTCTACGAACAAGCAC+CGG | - | chr2_3:47837043-47837062 | None:intergenic | 50.0% | |
| ACTAAATGGGGTCGGCTACA+TGG | - | chr2_3:47837648-47837667 | None:intergenic | 50.0% | |
| ATGTAGCCGACCCCATTTAG+TGG | + | chr2_3:47837647-47837666 | Msa0295290:intron | 50.0% | |
| TGTAGCCGACCCCATTTAGT+GGG | + | chr2_3:47837648-47837667 | Msa0295290:intron | 50.0% | |
| ATGTTGTCAATCGCGGATCG+TGG | - | chr2_3:47837748-47837767 | None:intergenic | 50.0% | |
| AGTTACTGTTGCGGTTGGAG+TGG | + | chr2_3:47837810-47837829 | Msa0295290:intron | 50.0% | |
| GTTACTGTTGCGGTTGGAGT+GGG | + | chr2_3:47837811-47837830 | Msa0295290:intron | 50.0% | |
| ! | TGCGGCCTTTTTCTACTGCA+GGG | + | chr2_3:47837950-47837969 | Msa0295290:intron | 50.0% |
| ACACTGATGTCCCACAGTAG+AGG | - | chr2_3:47838629-47838648 | None:intergenic | 50.0% | |
| ACAAAACTTACGGCGTGGTC+CGG | - | chr2_3:47838698-47838717 | None:intergenic | 50.0% | |
| GCACACAGGACATGCTGAAA+GGG | - | chr2_3:47838876-47838895 | None:intergenic | 50.0% | |
| AGCACACAGGACATGCTGAA+AGG | - | chr2_3:47838877-47838896 | None:intergenic | 50.0% | |
| !! | CTAGCTATAGCTTGCTCCAC+AGG | - | chr2_3:47838905-47838924 | None:intergenic | 50.0% |
| CGAAGTACAGGAGACTCTGA+TGG | - | chr2_3:47838941-47838960 | None:intergenic | 50.0% | |
| TTTCCAAGTGAACCAGAGGG+CGG | + | chr2_3:47838992-47839011 | Msa0295290:CDS | 50.0% | |
| !! | TTTTGGTGGATACCCTCCTC+TGG | + | chr2_3:47839021-47839040 | Msa0295290:CDS | 50.0% |
| ! | GATACCCTCCTCTGGAAGAA+AGG | + | chr2_3:47839029-47839048 | Msa0295290:CDS | 50.0% |
| TGCACTCAGTACGCACAAAC+TGG | - | chr2_3:47839403-47839422 | None:intergenic | 50.0% | |
| TGCTCCATCACATCTATGCC+AGG | + | chr2_3:47839636-47839655 | Msa0295290:intron | 50.0% | |
| TTGGATAGCAGGAGGAGAGT+TGG | + | chr2_3:47839774-47839793 | Msa0295290:CDS | 50.0% | |
| GCAGGAGGAGAGTTGGATTA+TGG | + | chr2_3:47839781-47839800 | Msa0295290:CDS | 50.0% | |
| CGTGCACATCCCTTGCAATT+TGG | + | chr2_3:47840378-47840397 | Msa0295290:intron | 50.0% | |
| !! | CTTACTCTAAGGCAGACTGC+AGG | + | chr2_3:47840623-47840642 | Msa0295290:intron | 50.0% |
| GTCTAACGGTCTACTCCTGA+AGG | - | chr2_3:47840650-47840669 | None:intergenic | 50.0% | |
| CAATAAGGAGAGGCCTCATG+AGG | - | chr2_3:47841069-47841088 | None:intergenic | 50.0% | |
| CTCATGAGGCCTCTCCTTAT+TGG | + | chr2_3:47841067-47841086 | Msa0295290:intron | 50.0% | |
| TGACAGGGAACAGCCCAATA+AGG | - | chr2_3:47841084-47841103 | None:intergenic | 50.0% | |
| TGATGTCTTTGTCGAGGCAG+AGG | + | chr2_3:47841232-47841251 | Msa0295290:CDS | 50.0% | |
| ATACGTCTCTATGGTACGCC+TGG | - | chr2_3:47842320-47842339 | None:intergenic | 50.0% | |
| GGCGTACCATAGAGACGTAT+TGG | + | chr2_3:47842320-47842339 | Msa0295290:intron | 50.0% | |
| ACAACAACTGGACGAGGATG+AGG | - | chr2_3:47842375-47842394 | None:intergenic | 50.0% | |
| GGACGCCGAATTACAACAAC+TGG | - | chr2_3:47842387-47842406 | None:intergenic | 50.0% | |
| GTGAAGAAGAATCCTAGGCG+CGG | + | chr2_3:47842447-47842466 | Msa0295290:CDS | 50.0% | |
| TGAAGAAGAATCCTAGGCGC+GGG | + | chr2_3:47842448-47842467 | Msa0295290:CDS | 50.0% | |
| TCGGCGGTTGGAGTTCGAAT+CGG | - | chr2_3:47836588-47836607 | None:intergenic | 55.0% | |
| ATGAACGGAATCTCGGCGGT+TGG | - | chr2_3:47836600-47836619 | None:intergenic | 55.0% | |
| GTGGGGTGGAGGGGTAAAAA+TGG | - | chr2_3:47836688-47836707 | None:intergenic | 55.0% | |
| !! | GGATTTTGAGTGGGGTGGAG+GGG | - | chr2_3:47836697-47836716 | None:intergenic | 55.0% |
| !! | CGGATTTTGAGTGGGGTGGA+GGG | - | chr2_3:47836698-47836717 | None:intergenic | 55.0% |
| !! | TCGGATTTTGAGTGGGGTGG+AGG | - | chr2_3:47836699-47836718 | None:intergenic | 55.0% |
| CGGTAACGTTTCGCAGGTTC+CGG | + | chr2_3:47837021-47837040 | Msa0295290:CDS | 55.0% | |
| CACGCAGTTACTGTTGCGGT+TGG | + | chr2_3:47837805-47837824 | Msa0295290:intron | 55.0% | |
| GCCGCCCGATGTTGAATCAA+TGG | + | chr2_3:47837839-47837858 | Msa0295290:intron | 55.0% | |
| ! | CTGCGGCCTTTTTCTACTGC+AGG | + | chr2_3:47837949-47837968 | Msa0295290:intron | 55.0% |
| ! | GCGGCCTTTTTCTACTGCAG+GGG | + | chr2_3:47837951-47837970 | Msa0295290:intron | 55.0% |
| TGCATTTCCTCCTCCTCCAC+CGG | + | chr2_3:47838657-47838676 | Msa0295290:CDS | 55.0% | |
| GTACGTCTTCTATCAGCCGG+TGG | - | chr2_3:47838676-47838695 | None:intergenic | 55.0% | |
| CCGGTACGTCTTCTATCAGC+CGG | - | chr2_3:47838679-47838698 | None:intergenic | 55.0% | |
| CCGGCTGATAGAAGACGTAC+CGG | + | chr2_3:47838676-47838695 | Msa0295290:CDS | 55.0% | |
| GGAGACTCTGATGGGGAACT+TGG | - | chr2_3:47838932-47838951 | None:intergenic | 55.0% | |
| CGTCCCTTTCTTCCAGAGGA+GGG | - | chr2_3:47839036-47839055 | None:intergenic | 55.0% | |
| ! | GAAGCGTCCCTTTCTTCCAG+AGG | - | chr2_3:47839040-47839059 | None:intergenic | 55.0% |
| GGTTTAGATGTGGCGACTGC+AGG | + | chr2_3:47839351-47839370 | Msa0295290:intron | 55.0% | |
| ! | GGACCGGTTCAGACCTGTTT+AGG | - | chr2_3:47840702-47840721 | None:intergenic | 55.0% |
| GGGAACAGCCCAATAAGGAG+AGG | - | chr2_3:47841079-47841098 | None:intergenic | 55.0% | |
| ATTTGGGCGCCACAAGAACC+TGG | - | chr2_3:47841177-47841196 | None:intergenic | 55.0% | |
| ACCTTCAGGCACATCTGCAG+AGG | - | chr2_3:47841481-47841500 | None:intergenic | 55.0% | |
| TAGGGAACAGGTGGAAGACG+AGG | - | chr2_3:47842408-47842427 | None:intergenic | 55.0% | |
| GGGAGAGGAGATAGGAGATC+AGG | + | chr2_3:47842468-47842487 | Msa0295290:CDS | 55.0% | |
| AGTGGGTCCCACTGAGACTC+CGG | - | chr2_3:47836644-47836663 | None:intergenic | 60.0% | |
| CTTCTATCAGCCGGTGGAGG+AGG | - | chr2_3:47838670-47838689 | None:intergenic | 60.0% | |
| CGTCTTCTATCAGCCGGTGG+AGG | - | chr2_3:47838673-47838692 | None:intergenic | 60.0% | |
| CCAAAATCAGAGCCGCCCTC+TGG | - | chr2_3:47839007-47839026 | None:intergenic | 60.0% | |
| !! | CCAGAGGGCGGCTCTGATTT+TGG | + | chr2_3:47839004-47839023 | Msa0295290:CDS | 60.0% |
| !! | GAGGGCGGCTCTGATTTTGG+TGG | + | chr2_3:47839007-47839026 | Msa0295290:CDS | 60.0% |
| GCGTCCCTTTCTTCCAGAGG+AGG | - | chr2_3:47839037-47839056 | None:intergenic | 60.0% | |
| TCAAATCCAGTCTGGCGCCC+AGG | - | chr2_3:47839487-47839506 | None:intergenic | 60.0% | |
| ACAGGTCTGAACCGGTCCCT+TGG | + | chr2_3:47840704-47840723 | Msa0295290:intron | 60.0% | |
| CAGGTCTGAACCGGTCCCTT+GGG | + | chr2_3:47840705-47840724 | Msa0295290:intron | 60.0% | |
| TGTGCGGAGAGATGTGCCTG+TGG | + | chr2_3:47841420-47841439 | Msa0295290:intron | 60.0% | |
| ! | GGCACATCTGCAGAGGCACA+AGG | - | chr2_3:47841474-47841493 | None:intergenic | 60.0% |
| GCCTCTGCAGATGTGCCTGA+AGG | + | chr2_3:47841477-47841496 | Msa0295290:intron | 60.0% | |
| ACTGGACGAGGATGAGGACG+AGG | - | chr2_3:47842369-47842388 | None:intergenic | 60.0% | |
| AAGAATCCTAGGCGCGGGAG+AGG | + | chr2_3:47842453-47842472 | Msa0295290:CDS | 60.0% | |
| GACTCCGGGGAAGGGTGAAG+AGG | - | chr2_3:47836629-47836648 | None:intergenic | 65.0% | |
| ACCCTTCCCCGGAGTCTCAG+TGG | + | chr2_3:47836633-47836652 | Msa0295290:five_prime_UTR | 65.0% | |
| CCCACTGAGACTCCGGGGAA+GGG | - | chr2_3:47836637-47836656 | None:intergenic | 65.0% | |
| CCCTTCCCCGGAGTCTCAGT+GGG | + | chr2_3:47836634-47836653 | Msa0295290:five_prime_UTR | 65.0% | |
| TCCCACTGAGACTCCGGGGA+AGG | - | chr2_3:47836638-47836657 | None:intergenic | 65.0% | |
| TGGGTCCCACTGAGACTCCG+GGG | - | chr2_3:47836642-47836661 | None:intergenic | 65.0% | |
| GTGGGTCCCACTGAGACTCC+GGG | - | chr2_3:47836643-47836662 | None:intergenic | 65.0% | |
| CTATCAGCCGGTGGAGGAGG+AGG | - | chr2_3:47838667-47838686 | None:intergenic | 65.0% | |
| ! | GAGCCGCCCTCTGGTTCACT+TGG | - | chr2_3:47838998-47839017 | None:intergenic | 65.0% |
| AGGCAGACTGCAGGGCCTTC+AGG | + | chr2_3:47840632-47840651 | Msa0295290:intron | 65.0% | |
| TGAGGACGAGGAGGAGGAGG+AGG | - | chr2_3:47842357-47842376 | None:intergenic | 65.0% | |
| GGATGAGGACGAGGAGGAGG+AGG | - | chr2_3:47842360-47842379 | None:intergenic | 65.0% | |
| CGAGGATGAGGACGAGGAGG+AGG | - | chr2_3:47842363-47842382 | None:intergenic | 65.0% | |
| GGACGAGGATGAGGACGAGG+AGG | - | chr2_3:47842366-47842385 | None:intergenic | 65.0% | |
| CTATCTCCTCTCCCGCGCCT+AGG | - | chr2_3:47842462-47842481 | None:intergenic | 65.0% | |
| CTAGGCGCGGGAGAGGAGAT+AGG | + | chr2_3:47842460-47842479 | Msa0295290:CDS | 65.0% | |
| AGCAGACCTGGGCGCCAGAC+TGG | + | chr2_3:47839478-47839497 | Msa0295290:CDS | 70.0% | |
| GGACGAGGAGGAGGAGGAGG+AGG | - | chr2_3:47842354-47842373 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 47836474 | 47842708 | 47836474 | ID=Msa0295290;Name=Msa0295290 |
| chr2_3 | mRNA | 47836474 | 47842708 | 47836474 | ID=Msa0295290-mRNA-1;Parent=Msa0295290;Name=Msa0295290-mRNA-1;_AED=0.08;_eAED=0.08;_QI=485|1|1|1|1|1|9|160|594 |
| chr2_3 | exon | 47836474 | 47837208 | 47836474 | ID=Msa0295290-mRNA-1:exon:14913;Parent=Msa0295290-mRNA-1 |
| chr2_3 | exon | 47838419 | 47838706 | 47838419 | ID=Msa0295290-mRNA-1:exon:14914;Parent=Msa0295290-mRNA-1 |
| chr2_3 | exon | 47838882 | 47839095 | 47838882 | ID=Msa0295290-mRNA-1:exon:14915;Parent=Msa0295290-mRNA-1 |
| chr2_3 | exon | 47839465 | 47839574 | 47839465 | ID=Msa0295290-mRNA-1:exon:14916;Parent=Msa0295290-mRNA-1 |
| chr2_3 | exon | 47839658 | 47839857 | 47839658 | ID=Msa0295290-mRNA-1:exon:14917;Parent=Msa0295290-mRNA-1 |
| chr2_3 | exon | 47840046 | 47840149 | 47840046 | ID=Msa0295290-mRNA-1:exon:14918;Parent=Msa0295290-mRNA-1 |
| chr2_3 | exon | 47841178 | 47841368 | 47841178 | ID=Msa0295290-mRNA-1:exon:14919;Parent=Msa0295290-mRNA-1 |
| chr2_3 | exon | 47841487 | 47841686 | 47841487 | ID=Msa0295290-mRNA-1:exon:14920;Parent=Msa0295290-mRNA-1 |
| chr2_3 | exon | 47842321 | 47842708 | 47842321 | ID=Msa0295290-mRNA-1:exon:14921;Parent=Msa0295290-mRNA-1 |
| chr2_3 | five_prime_UTR | 47836474 | 47836958 | 47836474 | ID=Msa0295290-mRNA-1:five_prime_utr;Parent=Msa0295290-mRNA-1 |
| chr2_3 | CDS | 47836959 | 47837208 | 47836959 | ID=Msa0295290-mRNA-1:cds;Parent=Msa0295290-mRNA-1 |
| chr2_3 | CDS | 47838419 | 47838706 | 47838419 | ID=Msa0295290-mRNA-1:cds;Parent=Msa0295290-mRNA-1 |
| chr2_3 | CDS | 47838882 | 47839095 | 47838882 | ID=Msa0295290-mRNA-1:cds;Parent=Msa0295290-mRNA-1 |
| chr2_3 | CDS | 47839465 | 47839574 | 47839465 | ID=Msa0295290-mRNA-1:cds;Parent=Msa0295290-mRNA-1 |
| chr2_3 | CDS | 47839658 | 47839857 | 47839658 | ID=Msa0295290-mRNA-1:cds;Parent=Msa0295290-mRNA-1 |
| chr2_3 | CDS | 47840046 | 47840149 | 47840046 | ID=Msa0295290-mRNA-1:cds;Parent=Msa0295290-mRNA-1 |
| chr2_3 | CDS | 47841178 | 47841368 | 47841178 | ID=Msa0295290-mRNA-1:cds;Parent=Msa0295290-mRNA-1 |
| chr2_3 | CDS | 47841487 | 47841686 | 47841487 | ID=Msa0295290-mRNA-1:cds;Parent=Msa0295290-mRNA-1 |
| chr2_3 | CDS | 47842321 | 47842548 | 47842321 | ID=Msa0295290-mRNA-1:cds;Parent=Msa0295290-mRNA-1 |
| chr2_3 | three_prime_UTR | 47842549 | 47842708 | 47842549 | ID=Msa0295290-mRNA-1:three_prime_utr;Parent=Msa0295290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
