Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297330 | XP_013464882.1 | 92.762 | 525 | 35 | 2 | 1 | 523 | 1 | 524 | 0.0 | 944 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297330 | A0A072VAY0 | 92.762 | 525 | 35 | 2 | 1 | 523 | 1 | 524 | 0.0 | 944 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0218490 | Msa0297330 | 0.840405 | 8.867990e-58 | -8.615850e-47 |
| Msa0297330 | Msa1433050 | 0.895536 | 8.732520e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297330 | MtrunA17_Chr2g0320661 | 92.762 | 525 | 35 | 2 | 1 | 523 | 1 | 524 | 0.0 | 944 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297330 | AT5G22820.2 | 49.341 | 531 | 239 | 9 | 9 | 523 | 13 | 529 | 5.47e-152 | 445 |
| Msa0297330 | AT5G22820.3 | 49.341 | 531 | 239 | 9 | 9 | 523 | 13 | 529 | 5.47e-152 | 445 |
| Msa0297330 | AT5G22820.1 | 51.940 | 464 | 205 | 6 | 9 | 466 | 13 | 464 | 1.61e-141 | 417 |
Find 118 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATATTATGTCAAATATTA+TGG | 0.210799 | 2_3:+51016605 | Msa0297330:CDS |
| CTATTCTCGTAGCTTAAAAT+TGG | 0.216716 | 2_3:+51013523 | Msa0297330:five_prime_UTR |
| GAGATTAGTATAGGAATTAT+TGG | 0.222571 | 2_3:+51015203 | Msa0297330:CDS |
| TGTGGATCATGGTACCTTTC+AGG | 0.233741 | 2_3:-51017000 | None:intergenic |
| TAAGAGTACATCTGAAAATA+TGG | 0.284963 | 2_3:+51014065 | Msa0297330:CDS |
| TAACTCTTTGACAGCTTAAC+TGG | 0.287033 | 2_3:-51019160 | None:intergenic |
| CTTCCAGATTCGTGCCTCTT+AGG | 0.294579 | 2_3:+51017617 | Msa0297330:intron |
| GCAAGGAGAATGTCAGGATT+TGG | 0.296219 | 2_3:+51014119 | Msa0297330:CDS |
| GCTTAACTGGTTGAGGCTTC+AGG | 0.307244 | 2_3:-51019147 | None:intergenic |
| TGCGGTACCTCAGCTTTATC+TGG | 0.309287 | 2_3:-51017288 | None:intergenic |
| AAGGAGGATGCTGAGAATAA+TGG | 0.324222 | 2_3:+51018975 | Msa0297330:CDS |
| CTTCGGTTGGTGAGGATGTA+TGG | 0.327244 | 2_3:+51014166 | Msa0297330:CDS |
| ATATTTACCATGTGATATTT+CGG | 0.330665 | 2_3:-51017498 | None:intergenic |
| TTTGATTCAGTGGAACTTCA+TGG | 0.360064 | 2_3:-51015238 | None:intergenic |
| CAGTTGTCCAGACCAATCTT+TGG | 0.361160 | 2_3:+51019096 | Msa0297330:three_prime_UTR |
| GATAAGGAAGCTCTTGCCTT+TGG | 0.380614 | 2_3:+51013921 | Msa0297330:CDS |
| AAGTTTATTCCACCTTGTTT+CGG | 0.383635 | 2_3:+51017754 | Msa0297330:CDS |
| AGGAGGATGCTGAGAATAAT+GGG | 0.389583 | 2_3:+51018976 | Msa0297330:CDS |
| ACCCATGCTGAAGCTTGGTT+TGG | 0.392183 | 2_3:+51016915 | Msa0297330:CDS |
| TTAATTCTTCGTGCTATTGA+AGG | 0.395736 | 2_3:+51017183 | Msa0297330:CDS |
| TCTTCTTCTTCTTCAATGGA+TGG | 0.396399 | 2_3:-51013593 | None:intergenic |
| CTTCCACCCATGCTGAAGCT+TGG | 0.397856 | 2_3:+51016910 | Msa0297330:CDS |
| CTCGGTCAACGGAGTTGCTT+CGG | 0.403237 | 2_3:+51013951 | Msa0297330:CDS |
| CAAGGAGAATGTCAGGATTT+GGG | 0.405190 | 2_3:+51014120 | Msa0297330:CDS |
| CACCTTGTTTCGGTTCTTGT+CGG | 0.406866 | 2_3:+51017764 | Msa0297330:CDS |
| AGATTAGTATAGGAATTATT+GGG | 0.409903 | 2_3:+51015204 | Msa0297330:CDS |
| TAATAGACTCGCCACTTTGA+AGG | 0.417650 | 2_3:-51016555 | None:intergenic |
| AGTTATAGATGAACATTCTC+AGG | 0.417677 | 2_3:+51017212 | Msa0297330:CDS |
| GAGGATGTATGGGAAGAATA+TGG | 0.436028 | 2_3:+51014177 | Msa0297330:CDS |
| GGTGATGGAATTGAACGTTC+TGG | 0.436756 | 2_3:+51014141 | Msa0297330:CDS |
| CATAATAAAGTAATTCTACT+TGG | 0.440478 | 2_3:-51019063 | None:intergenic |
| AGAAAGTCAGCAGAAAGCTT+TGG | 0.443296 | 2_3:+51016879 | Msa0297330:CDS |
| TCTTCAATGGATGGATTTGT+CGG | 0.444494 | 2_3:-51013584 | None:intergenic |
| TTCTCGTAGCTTAAAATTGG+AGG | 0.449038 | 2_3:+51013526 | Msa0297330:five_prime_UTR |
| CATGTCAAACCTCCAAAGAT+TGG | 0.455428 | 2_3:-51019108 | None:intergenic |
| GTTATATAATCTCCTTGATA+AGG | 0.458047 | 2_3:+51013905 | Msa0297330:CDS |
| TATTTGACATAATATATGTT+CGG | 0.460536 | 2_3:-51016599 | None:intergenic |
| AAAGTGGCGAGTCTATTAGA+TGG | 0.461025 | 2_3:+51016560 | Msa0297330:CDS |
| CAATGTGTTGACTCCTGTCC+TGG | 0.467526 | 2_3:+51017824 | Msa0297330:CDS |
| CTTGCCTTTGGATTCCGCCT+CGG | 0.471928 | 2_3:+51013933 | Msa0297330:CDS |
| TTGGATTCCGCCTCGGTCAA+CGG | 0.472032 | 2_3:+51013940 | Msa0297330:CDS |
| AATTGAACGTTCTGGTGCTT+CGG | 0.475047 | 2_3:+51014149 | Msa0297330:CDS |
| TCTCATGCAAGGAGAATGTC+AGG | 0.475462 | 2_3:+51014113 | Msa0297330:CDS |
| TAACCAGCATTGTGAATCAA+TGG | 0.475866 | 2_3:+51018943 | Msa0297330:CDS |
| ACCTCGTGTGATGGAGGAAA+AGG | 0.480383 | 2_3:-51013653 | None:intergenic |
| CTAGCATCTGCTGTTGAACC+AGG | 0.481137 | 2_3:-51017842 | None:intergenic |
| GTCGACACTATTTGATTCAG+TGG | 0.487545 | 2_3:-51015248 | None:intergenic |
| TTGGTTATAGATAATAAAGA+AGG | 0.492848 | 2_3:+51013994 | Msa0297330:CDS |
| TTTGACAGCTTAACTGGTTG+AGG | 0.494793 | 2_3:-51019154 | None:intergenic |
| TGACCCTAGCCGAGGAGCCT+TGG | 0.498070 | 2_3:+51013975 | Msa0297330:CDS |
| ATAACCAAGGCTCCTCGGCT+AGG | 0.501362 | 2_3:-51013979 | None:intergenic |
| ATCTGCTGTTGAACCAGGAC+AGG | 0.502207 | 2_3:-51017837 | None:intergenic |
| GAATGTCAGGATTTGGGTGA+TGG | 0.503091 | 2_3:+51014126 | Msa0297330:CDS |
| AATCAAATAGTGTCGACAAA+AGG | 0.503284 | 2_3:+51015254 | Msa0297330:CDS |
| ATGCTACAGGAGATTAGTAT+AGG | 0.504550 | 2_3:+51015194 | Msa0297330:intron |
| TTCTTTATTATCTATAACCA+AGG | 0.505295 | 2_3:-51013992 | None:intergenic |
| AGGCAAGAGCTTCCTTATCA+AGG | 0.509791 | 2_3:-51013917 | None:intergenic |
| TGGAAGCAAGAAATGCAGTC+TGG | 0.510958 | 2_3:+51017678 | Msa0297330:CDS |
| TTACCTTCTCTAAAAGCTGA+AGG | 0.511983 | 2_3:-51016648 | None:intergenic |
| CAAACCTCCAAAGATTGGTC+TGG | 0.513361 | 2_3:-51019103 | None:intergenic |
| GACAGGAGTCAACACATTGT+TGG | 0.513955 | 2_3:-51017820 | None:intergenic |
| GGATTTGTCGGAACCGCCAT+GGG | 0.517514 | 2_3:-51013572 | None:intergenic |
| GAATCAATGGATTGCTGTAA+AGG | 0.518691 | 2_3:+51018956 | Msa0297330:CDS |
| TAACCAAGGCTCCTCGGCTA+GGG | 0.521780 | 2_3:-51013978 | None:intergenic |
| TCCAAATCATCCGAAGCAAA+AGG | 0.522029 | 2_3:-51017659 | None:intergenic |
| TTTGAATCTTCTCTCATGCA+AGG | 0.526719 | 2_3:+51014102 | Msa0297330:CDS |
| TTGTCCAGACCAATCTTTGG+AGG | 0.536546 | 2_3:+51019099 | Msa0297330:three_prime_UTR |
| AATCCATTGATTCACAATGC+TGG | 0.539426 | 2_3:-51018946 | None:intergenic |
| TATCAATCAGACCACCTAAG+AGG | 0.544952 | 2_3:-51017631 | None:intergenic |
| TAAAACACATGCGGAACTCA+TGG | 0.547575 | 2_3:+51014227 | Msa0297330:CDS |
| GAACGTTCTGGTGCTTCGGT+TGG | 0.550806 | 2_3:+51014153 | Msa0297330:CDS |
| TGGATTTGTCGGAACCGCCA+TGG | 0.553089 | 2_3:-51013573 | None:intergenic |
| TGCCAAACCAAGCTTCAGCA+TGG | 0.553733 | 2_3:-51016917 | None:intergenic |
| TCTCGTAGCTTAAAATTGGA+GGG | 0.555905 | 2_3:+51013527 | Msa0297330:five_prime_UTR |
| TATCTATAACCAAGGCTCCT+CGG | 0.556855 | 2_3:-51013984 | None:intergenic |
| TCGTTACAAATTGATGCAGA+TGG | 0.558666 | 2_3:-51014024 | None:intergenic |
| AAACCAAGCTTCAGCATGGG+TGG | 0.563385 | 2_3:-51016913 | None:intergenic |
| TTCTGGTGCTTCGGTTGGTG+AGG | 0.569662 | 2_3:+51014158 | Msa0297330:CDS |
| CGAGTCTATTAGATGGGCTG+AGG | 0.573485 | 2_3:+51016567 | Msa0297330:CDS |
| TTGCATGAGAGAAGATTCAA+AGG | 0.576865 | 2_3:-51014100 | None:intergenic |
| CCAGATTCGTGCCTCTTAGG+TGG | 0.577487 | 2_3:+51017620 | Msa0297330:intron |
| GAGAACAGATTGTTAACCGT+GGG | 0.580139 | 2_3:+51016532 | Msa0297330:intron |
| GTGATGAAAGAATGCCTGAA+AGG | 0.583242 | 2_3:+51016986 | Msa0297330:CDS |
| AAGTGGCGAGTCTATTAGAT+GGG | 0.584505 | 2_3:+51016561 | Msa0297330:CDS |
| AGGACTGATTGAGATAATTG+TGG | 0.585676 | 2_3:+51015274 | Msa0297330:CDS |
| TTCGGTTGGTGAGGATGTAT+GGG | 0.587118 | 2_3:+51014167 | Msa0297330:CDS |
| CTCGCCACTTTGAAGGCCCA+CGG | 0.591065 | 2_3:-51016548 | None:intergenic |
| TGGTTATAGATAATAAAGAA+GGG | 0.593998 | 2_3:+51013995 | Msa0297330:CDS |
| CATGTTTCACATAGGCATTG+AGG | 0.594745 | 2_3:-51015317 | None:intergenic |
| GTGGAACTTCATGGCAAGCA+AGG | 0.601090 | 2_3:-51015229 | None:intergenic |
| TTGACCGAGGCGGAATCCAA+AGG | 0.602244 | 2_3:-51013937 | None:intergenic |
| ATCAAGGAGATTATATAACT+AGG | 0.603135 | 2_3:-51013901 | None:intergenic |
| GAGAATAATGGGAATGCTGA+AGG | 0.603883 | 2_3:+51018987 | Msa0297330:CDS |
| GCCAAACCAAGCTTCAGCAT+GGG | 0.603907 | 2_3:-51016916 | None:intergenic |
| AATCGAAACGATTCCCATGG+CGG | 0.627072 | 2_3:+51013559 | Msa0297330:exon |
| CATGTGATATTTCGGAAGCA+CGG | 0.628378 | 2_3:-51017490 | None:intergenic |
| CAAAATCGAAACGATTCCCA+TGG | 0.631498 | 2_3:+51013556 | Msa0297330:exon |
| CATACCGACATGTTTCACAT+AGG | 0.632373 | 2_3:-51015325 | None:intergenic |
| TTCCGACAAGAACCGAAACA+AGG | 0.636386 | 2_3:-51017766 | None:intergenic |
| TAGACTTACAGTAACACGCT+CGG | 0.637773 | 2_3:-51015050 | None:intergenic |
| ATGATGATAACCTCGTGTGA+TGG | 0.641969 | 2_3:-51013662 | None:intergenic |
| GGTTATAGATAATAAAGAAG+GGG | 0.648327 | 2_3:+51013996 | Msa0297330:CDS |
| GGAGGAAAAGGATGATGTGT+GGG | 0.649014 | 2_3:-51013641 | None:intergenic |
| CGTGCTTCCGAAATATCACA+TGG | 0.652038 | 2_3:+51017491 | Msa0297330:CDS |
| TGGAGGAAAAGGATGATGTG+TGG | 0.652696 | 2_3:-51013642 | None:intergenic |
| CGAAGCAACTCCGTTGACCG+AGG | 0.657317 | 2_3:-51013950 | None:intergenic |
| AATGCCTATGTGAAACATGT+CGG | 0.660409 | 2_3:+51015321 | Msa0297330:CDS |
| TCAATGGATTGCTGTAAAGG+AGG | 0.666699 | 2_3:+51018959 | Msa0297330:CDS |
| ATGATAACCTCGTGTGATGG+AGG | 0.671070 | 2_3:-51013659 | None:intergenic |
| TGAGAACAGATTGTTAACCG+TGG | 0.671208 | 2_3:+51016531 | Msa0297330:intron |
| AGCTGCCAGTAAAACACATG+CGG | 0.671607 | 2_3:+51014218 | Msa0297330:CDS |
| AGCAACTCCGTTGACCGAGG+CGG | 0.671827 | 2_3:-51013947 | None:intergenic |
| GCTTCGGATGACCCTAGCCG+AGG | 0.672522 | 2_3:+51013967 | Msa0297330:CDS |
| TTAACCGTGGGCCTTCAAAG+TGG | 0.674034 | 2_3:+51016544 | Msa0297330:CDS |
| AATATTTGCAATAAGAACTG+CGG | 0.674411 | 2_3:-51017450 | None:intergenic |
| CGACAAGAACCGAAACAAGG+TGG | 0.675348 | 2_3:-51017763 | None:intergenic |
| CAAGTTTCCAGATAAAGCTG+AGG | 0.689931 | 2_3:+51017281 | Msa0297330:CDS |
| GAGCTCGAGCACGAGCACGA+TGG | 0.728685 | 2_3:+51013617 | Msa0297330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAATAAAATAATATTGAAA+AGG | - | chr2_3:51016288-51016307 | None:intergenic | 10.0% |
| !! | ATATATTATGTCAAATATTA+TGG | + | chr2_3:51016605-51016624 | Msa0297330:CDS | 10.0% |
| !!! | ATGATAAAAATGATTTTGAT+TGG | - | chr2_3:51014713-51014732 | None:intergenic | 15.0% |
| !! | TAAAACAAAAACAAAAAACA+GGG | - | chr2_3:51015444-51015463 | None:intergenic | 15.0% |
| !! | ATAAAACAAAAACAAAAAAC+AGG | - | chr2_3:51015445-51015464 | None:intergenic | 15.0% |
| !!! | CTATTATACATTATTTTTGT+TGG | + | chr2_3:51015474-51015493 | Msa0297330:intron | 15.0% |
| !!! | ACACATTTTTTAATATGAAA+AGG | - | chr2_3:51015536-51015555 | None:intergenic | 15.0% |
| !! | ATAAATAATTCAAAAGGAAA+TGG | - | chr2_3:51015600-51015619 | None:intergenic | 15.0% |
| !! | AAGGAAATAAATAATTCAAA+AGG | - | chr2_3:51015606-51015625 | None:intergenic | 15.0% |
| !!! | AATTACATAATAGACATTTT+AGG | - | chr2_3:51015873-51015892 | None:intergenic | 15.0% |
| !! | TTGAAATTGTATAATTTCAA+AGG | + | chr2_3:51016106-51016125 | Msa0297330:intron | 15.0% |
| !! | TGAAATTGTATAATTTCAAA+GGG | + | chr2_3:51016107-51016126 | Msa0297330:intron | 15.0% |
| !! | TATTTGACATAATATATGTT+CGG | - | chr2_3:51016602-51016621 | None:intergenic | 15.0% |
| !! | AAATAAAAAAACAAGCAAAA+TGG | - | chr2_3:51016777-51016796 | None:intergenic | 15.0% |
| !! | AAAAAAAATCCATATATACA+AGG | - | chr2_3:51018335-51018354 | None:intergenic | 15.0% |
| !! | AAGTAGAATTTGTAATTAAG+CGG | - | chr2_3:51013693-51013712 | None:intergenic | 20.0% |
| !! | TATAACACTATTGCATTATT+TGG | + | chr2_3:51013787-51013806 | Msa0297330:intron | 20.0% |
| !! | TTCTTTATTATCTATAACCA+AGG | - | chr2_3:51013995-51014014 | None:intergenic | 20.0% |
| !! | TTGGTTATAGATAATAAAGA+AGG | + | chr2_3:51013994-51014013 | Msa0297330:CDS | 20.0% |
| !! | TGGTTATAGATAATAAAGAA+GGG | + | chr2_3:51013995-51014014 | Msa0297330:CDS | 20.0% |
| !! | TTAATTACACCATCAAATTT+CGG | + | chr2_3:51014540-51014559 | Msa0297330:intron | 20.0% |
| !!! | TCATTTTTATAGCAATATCA+TGG | + | chr2_3:51014891-51014910 | Msa0297330:intron | 20.0% |
| !! | TTCAGTTTATACAATCAAAA+CGG | - | chr2_3:51014948-51014967 | None:intergenic | 20.0% |
| !! | TTGTATAAACTGAAATTAGA+TGG | + | chr2_3:51014954-51014973 | Msa0297330:intron | 20.0% |
| !! | TGTGAAACTAAAATATTATC+AGG | + | chr2_3:51015123-51015142 | Msa0297330:intron | 20.0% |
| !! | AGATTAGTATAGGAATTATT+GGG | + | chr2_3:51015204-51015223 | Msa0297330:CDS | 20.0% |
| !! | AAATGTCTATTATGTAATTC+TGG | + | chr2_3:51015874-51015893 | Msa0297330:intron | 20.0% |
| !!! | ATTTCTTTTTTGTATATGTC+TGG | + | chr2_3:51016081-51016100 | Msa0297330:intron | 20.0% |
| !!! | TTTTATTTTTAACAGAGTGT+AGG | + | chr2_3:51016838-51016857 | Msa0297330:intron | 20.0% |
| !!! | TTTATTTTTAACAGAGTGTA+GGG | + | chr2_3:51016839-51016858 | Msa0297330:intron | 20.0% |
| !! | AATTGGTATTAGAAGATAAT+AGG | - | chr2_3:51017060-51017079 | None:intergenic | 20.0% |
| !! | ACTGAATATCTTAAAATTTC+AGG | + | chr2_3:51017145-51017164 | Msa0297330:intron | 20.0% |
| !! | ATATTTACCATGTGATATTT+CGG | - | chr2_3:51017501-51017520 | None:intergenic | 20.0% |
| !! | GATGCATAATTTAATAAGTT+TGG | + | chr2_3:51018176-51018195 | Msa0297330:intron | 20.0% |
| !!! | AAAAGATTTTACACATGATA+AGG | + | chr2_3:51018411-51018430 | Msa0297330:intron | 20.0% |
| !! | TTGACAATAATTAAATGAAG+CGG | - | chr2_3:51018684-51018703 | None:intergenic | 20.0% |
| !! | CATTTAATTATTGTCAATGT+TGG | + | chr2_3:51018687-51018706 | Msa0297330:intron | 20.0% |
| !! | CTAATGATCTATATGTATTT+AGG | + | chr2_3:51018755-51018774 | Msa0297330:intron | 20.0% |
| !! | CATAATAAAGTAATTCTACT+TGG | - | chr2_3:51019066-51019085 | None:intergenic | 20.0% |
| !! | AAAGATTAATGATTAGTTGC+AGG | - | chr2_3:51013765-51013784 | None:intergenic | 25.0% |
| ! | ATCAAGGAGATTATATAACT+AGG | - | chr2_3:51013904-51013923 | None:intergenic | 25.0% |
| ! | GTTATATAATCTCCTTGATA+AGG | + | chr2_3:51013905-51013924 | Msa0297330:CDS | 25.0% |
| ! | GGTTATAGATAATAAAGAAG+GGG | + | chr2_3:51013996-51014015 | Msa0297330:CDS | 25.0% |
| !! | TAAGAGTACATCTGAAAATA+TGG | + | chr2_3:51014065-51014084 | Msa0297330:CDS | 25.0% |
| !! | AAGAATATGGTTGTATTTTG+TGG | + | chr2_3:51014190-51014209 | Msa0297330:CDS | 25.0% |
| !! | AGAATATGGTTGTATTTTGT+GGG | + | chr2_3:51014191-51014210 | Msa0297330:CDS | 25.0% |
| !! | GATATTTGTGGAGATATTTT+AGG | + | chr2_3:51014338-51014357 | Msa0297330:intron | 25.0% |
| ! | TAGGAACTAACTTAAGAAAA+CGG | + | chr2_3:51014357-51014376 | Msa0297330:intron | 25.0% |
| ! | CAAAAGTGAGATTAATTTCT+AGG | - | chr2_3:51014444-51014463 | None:intergenic | 25.0% |
| !! | GGTTATAGCATTTTGTATTT+GGG | - | chr2_3:51014743-51014762 | None:intergenic | 25.0% |
| !! | AGGTTATAGCATTTTGTATT+TGG | - | chr2_3:51014744-51014763 | None:intergenic | 25.0% |
| ! | AAATACAAAATGCTATAACC+TGG | + | chr2_3:51014743-51014762 | Msa0297330:intron | 25.0% |
| ! | ATGATTGTTTGAATGTATTG+TGG | + | chr2_3:51014818-51014837 | Msa0297330:intron | 25.0% |
| ! | TTTGTATTAATACATGCTAC+AGG | + | chr2_3:51015181-51015200 | Msa0297330:intron | 25.0% |
| ! | GAGATTAGTATAGGAATTAT+TGG | + | chr2_3:51015203-51015222 | Msa0297330:CDS | 25.0% |
| !!! | TCTCTCTTTCATTTTTGTTA+AGG | + | chr2_3:51015379-51015398 | Msa0297330:intron | 25.0% |
| ! | AAAAAACAGGGATAACAATA+CGG | - | chr2_3:51015432-51015451 | None:intergenic | 25.0% |
| ! | TAATTTCTCTCTCTTGATTT+CGG | + | chr2_3:51016006-51016025 | Msa0297330:intron | 25.0% |
| ! | TTCATCAAGAAAGAAGATAA+TGG | - | chr2_3:51016336-51016355 | None:intergenic | 25.0% |
| !! | ACAACACGCATAAAATTTTA+CGG | - | chr2_3:51016443-51016462 | None:intergenic | 25.0% |
| ! | CTAATTTCATTGATGCAAAA+TGG | - | chr2_3:51017031-51017050 | None:intergenic | 25.0% |
| ! | GTCAATAATGTTGTCATAAT+TGG | - | chr2_3:51017077-51017096 | None:intergenic | 25.0% |
| ! | AAGTGTTAACTACAATAATG+CGG | - | chr2_3:51017309-51017328 | None:intergenic | 25.0% |
| ! | GACATGAAATGAAAATGATT+TGG | + | chr2_3:51017364-51017383 | Msa0297330:intron | 25.0% |
| ! | AATATTTGCAATAAGAACTG+CGG | - | chr2_3:51017453-51017472 | None:intergenic | 25.0% |
| !! | TGATATATTTCCTTTTGCTT+CGG | + | chr2_3:51017649-51017668 | Msa0297330:CDS | 25.0% |
| ! | AAGTGCAAATAACTAAATGA+AGG | - | chr2_3:51017882-51017901 | None:intergenic | 25.0% |
| ! | CAGAAATCCTCATAATATAA+TGG | + | chr2_3:51018445-51018464 | Msa0297330:intron | 25.0% |
| ! | GGACTTATAAATGTAATGAA+TGG | - | chr2_3:51018663-51018682 | None:intergenic | 25.0% |
| !! | TTATTGTCAATGTTGGTTAA+TGG | + | chr2_3:51018694-51018713 | Msa0297330:intron | 25.0% |
| ! | GATAGATGTAAAAAAGTTGT+TGG | + | chr2_3:51019022-51019041 | Msa0297330:CDS | 25.0% |
| CTATTCTCGTAGCTTAAAAT+TGG | + | chr2_3:51013523-51013542 | Msa0297330:five_prime_UTR | 30.0% | |
| ! | GCATGGATTGAAAATTGAAA+TGG | - | chr2_3:51013730-51013749 | None:intergenic | 30.0% |
| ! | TGAGTTCTTTTGTATGTTCA+TGG | + | chr2_3:51014470-51014489 | Msa0297330:intron | 30.0% |
| TACTCAAAACCGAAATTTGA+TGG | - | chr2_3:51014552-51014571 | None:intergenic | 30.0% | |
| ! | TTCAGACTGCATTCTTTTTA+TGG | + | chr2_3:51015098-51015117 | Msa0297330:intron | 30.0% |
| !! | AATCAAATAGTGTCGACAAA+AGG | + | chr2_3:51015254-51015273 | Msa0297330:CDS | 30.0% |
| GTCAAAACATTTGATATAGC+AGG | - | chr2_3:51015508-51015527 | None:intergenic | 30.0% | |
| CAGAATAGATAAGGCATAAT+TGG | - | chr2_3:51015576-51015595 | None:intergenic | 30.0% | |
| CTTTGAACTCTTTACTATTG+AGG | + | chr2_3:51015691-51015710 | Msa0297330:intron | 30.0% | |
| ! | CATAGAAAGCTGATATTTTG+TGG | + | chr2_3:51016041-51016060 | Msa0297330:intron | 30.0% |
| !!! | TTGTTATTTTAGCCACCTTT+TGG | + | chr2_3:51016164-51016183 | Msa0297330:intron | 30.0% |
| ! | AGATAATGGTACAAAGAAAG+TGG | - | chr2_3:51016322-51016341 | None:intergenic | 30.0% |
| ATATACCAGCCTGAATATAT+AGG | + | chr2_3:51016388-51016407 | Msa0297330:intron | 30.0% | |
| AGCCTGAATATATAGGAATA+GGG | + | chr2_3:51016395-51016414 | Msa0297330:intron | 30.0% | |
| TTTCTTGTGCAATATTCCAT+AGG | - | chr2_3:51016728-51016747 | None:intergenic | 30.0% | |
| ATATTGCACAAGAAACAATC+TGG | + | chr2_3:51016733-51016752 | Msa0297330:intron | 30.0% | |
| TATTGCACAAGAAACAATCT+GGG | + | chr2_3:51016734-51016753 | Msa0297330:intron | 30.0% | |
| TTTCATTGATGCAAAATGGA+GGG | - | chr2_3:51017027-51017046 | None:intergenic | 30.0% | |
| ATTTCATTGATGCAAAATGG+AGG | - | chr2_3:51017028-51017047 | None:intergenic | 30.0% | |
| TAACTATTCATCAATCAGTC+CGG | + | chr2_3:51017106-51017125 | Msa0297330:intron | 30.0% | |
| ! | TTAATTCTTCGTGCTATTGA+AGG | + | chr2_3:51017183-51017202 | Msa0297330:CDS | 30.0% |
| AGTTATAGATGAACATTCTC+AGG | + | chr2_3:51017212-51017231 | Msa0297330:CDS | 30.0% | |
| ! | TTTTCATCTTGTATGTGACA+TGG | + | chr2_3:51017257-51017276 | Msa0297330:CDS | 30.0% |
| AGCGCATATTAAATAACAAG+AGG | - | chr2_3:51017333-51017352 | None:intergenic | 30.0% | |
| TTTGGACAACTGAAAAACAA+TGG | + | chr2_3:51017382-51017401 | Msa0297330:intron | 30.0% | |
| ACTGAAAAACAATGGTGAAT+TGG | + | chr2_3:51017390-51017409 | Msa0297330:intron | 30.0% | |
| AAATATCGCATTGAAGTCTA+TGG | - | chr2_3:51017541-51017560 | None:intergenic | 30.0% | |
| ! | AAGTTTATTCCACCTTGTTT+CGG | + | chr2_3:51017754-51017773 | Msa0297330:CDS | 30.0% |
| GAAATTTGAATCACGTTTCT+TGG | + | chr2_3:51017943-51017962 | Msa0297330:intron | 30.0% | |
| TAGTGCAACAAGAATTAAGA+TGG | - | chr2_3:51018042-51018061 | None:intergenic | 30.0% | |
| ! | CTTGTTGCACTAATTTCTTT+TGG | + | chr2_3:51018050-51018069 | Msa0297330:intron | 30.0% |
| AGAAAAATAAACCCGATATG+AGG | + | chr2_3:51018215-51018234 | Msa0297330:intron | 30.0% | |
| GTAACAGCCATTATATTATG+AGG | - | chr2_3:51018455-51018474 | None:intergenic | 30.0% | |
| CATCACTATAATTATGCTTG+TGG | - | chr2_3:51018510-51018529 | None:intergenic | 30.0% | |
| CACAAGCATAATTATAGTGA+TGG | + | chr2_3:51018508-51018527 | Msa0297330:intron | 30.0% | |
| GCATAATTATAGTGATGGTT+AGG | + | chr2_3:51018513-51018532 | Msa0297330:intron | 30.0% | |
| TAACAAGATGGAAGTCAAAA+AGG | - | chr2_3:51018812-51018831 | None:intergenic | 30.0% | |
| CTAATATAATCAGATGCACA+GGG | - | chr2_3:51018843-51018862 | None:intergenic | 30.0% | |
| TATTTGTTTCCCTTTACCTT+TGG | + | chr2_3:51018902-51018921 | Msa0297330:intron | 30.0% | |
| GCTATTATTCCAAAGGTAAA+GGG | - | chr2_3:51018914-51018933 | None:intergenic | 30.0% | |
| AGCTATTATTCCAAAGGTAA+AGG | - | chr2_3:51018915-51018934 | None:intergenic | 30.0% | |
| TTCTCGTAGCTTAAAATTGG+AGG | + | chr2_3:51013526-51013545 | Msa0297330:five_prime_UTR | 35.0% | |
| TCTCGTAGCTTAAAATTGGA+GGG | + | chr2_3:51013527-51013546 | Msa0297330:five_prime_UTR | 35.0% | |
| ! | TCTTCAATGGATGGATTTGT+CGG | - | chr2_3:51013587-51013606 | None:intergenic | 35.0% |
| TCTTCTTCTTCTTCAATGGA+TGG | - | chr2_3:51013596-51013615 | None:intergenic | 35.0% | |
| CTCTTCTTCTTCTTCTTCAA+TGG | - | chr2_3:51013600-51013619 | None:intergenic | 35.0% | |
| TCGTTACAAATTGATGCAGA+TGG | - | chr2_3:51014027-51014046 | None:intergenic | 35.0% | |
| TTGCATGAGAGAAGATTCAA+AGG | - | chr2_3:51014103-51014122 | None:intergenic | 35.0% | |
| TTTGAATCTTCTCTCATGCA+AGG | + | chr2_3:51014102-51014121 | Msa0297330:CDS | 35.0% | |
| TACACATGCATCCAACAAAT+TGG | + | chr2_3:51014307-51014326 | Msa0297330:intron | 35.0% | |
| ACACATGCATCCAACAAATT+GGG | + | chr2_3:51014308-51014327 | Msa0297330:intron | 35.0% | |
| ATCTACATAGCCCAATTTGT+TGG | - | chr2_3:51014321-51014340 | None:intergenic | 35.0% | |
| TTGGGCTATGTAGATATTTG+TGG | + | chr2_3:51014326-51014345 | Msa0297330:intron | 35.0% | |
| !! | GCTCTTAAATGTGATTTGCT+TGG | + | chr2_3:51014379-51014398 | Msa0297330:intron | 35.0% |
| ! | GATTAATTTCTAGGCACAGA+CGG | - | chr2_3:51014435-51014454 | None:intergenic | 35.0% |
| !! | GAGTTTCACTCAGTTACTTT+TGG | + | chr2_3:51014620-51014639 | Msa0297330:intron | 35.0% |
| AAAATGCTATAACCTGGTAG+TGG | + | chr2_3:51014749-51014768 | Msa0297330:intron | 35.0% | |
| ACTCGAAGCTTGATTATGAT+GGG | - | chr2_3:51014872-51014891 | None:intergenic | 35.0% | |
| CGTAAAGAAATGAGAGAAAG+TGG | - | chr2_3:51014917-51014936 | None:intergenic | 35.0% | |
| AGTATTAGATTCTCCACCTA+GGG | - | chr2_3:51014995-51015014 | None:intergenic | 35.0% | |
| AAGTATTAGATTCTCCACCT+AGG | - | chr2_3:51014996-51015015 | None:intergenic | 35.0% | |
| ATGCTACAGGAGATTAGTAT+AGG | + | chr2_3:51015194-51015213 | Msa0297330:intron | 35.0% | |
| TTTGATTCAGTGGAACTTCA+TGG | - | chr2_3:51015241-51015260 | None:intergenic | 35.0% | |
| AGGACTGATTGAGATAATTG+TGG | + | chr2_3:51015274-51015293 | Msa0297330:CDS | 35.0% | |
| AATGCCTATGTGAAACATGT+CGG | + | chr2_3:51015321-51015340 | Msa0297330:CDS | 35.0% | |
| TACGGAAATAGTAACGAAAC+AGG | - | chr2_3:51015414-51015433 | None:intergenic | 35.0% | |
| GGAAATGGACAGAATAGATA+AGG | - | chr2_3:51015585-51015604 | None:intergenic | 35.0% | |
| GAGTTCAAAGTCTATCATAG+AGG | - | chr2_3:51015681-51015700 | None:intergenic | 35.0% | |
| !! | ACATAAGCTTTGAGCTTAGA+TGG | - | chr2_3:51015776-51015795 | None:intergenic | 35.0% |
| CTAAGCTCAAAGCTTATGTT+TGG | + | chr2_3:51015777-51015796 | Msa0297330:intron | 35.0% | |
| AGAAATTAACGCATATCCGT+AGG | - | chr2_3:51015994-51016013 | None:intergenic | 35.0% | |
| !!! | CTCTAGACTTATTTTGCACA+GGG | + | chr2_3:51016141-51016160 | Msa0297330:intron | 35.0% |
| !!! | GCTCATGATGTTTTTAGAAC+TGG | + | chr2_3:51016193-51016212 | Msa0297330:intron | 35.0% |
| TCTGAGTCATGCAGAAATAT+TGG | + | chr2_3:51016221-51016240 | Msa0297330:intron | 35.0% | |
| TGCTACATGATTCAATTCCT+AGG | + | chr2_3:51016251-51016270 | Msa0297330:intron | 35.0% | |
| AAAAGGCAAAACTAGAACCT+AGG | - | chr2_3:51016271-51016290 | None:intergenic | 35.0% | |
| CTATTCCTATATATTCAGGC+TGG | - | chr2_3:51016396-51016415 | None:intergenic | 35.0% | |
| CAGCCTGAATATATAGGAAT+AGG | + | chr2_3:51016394-51016413 | Msa0297330:intron | 35.0% | |
| GCCTGAATATATAGGAATAG+GGG | + | chr2_3:51016396-51016415 | Msa0297330:intron | 35.0% | |
| TCCCCTATTCCTATATATTC+AGG | - | chr2_3:51016400-51016419 | None:intergenic | 35.0% | |
| ! | TTACCTTCTCTAAAAGCTGA+AGG | - | chr2_3:51016651-51016670 | None:intergenic | 35.0% |
| TGATTAGTGACTCAGAAACA+AGG | - | chr2_3:51016804-51016823 | None:intergenic | 35.0% | |
| ACTTATTGTTTGCGATTCTG+AGG | + | chr2_3:51017898-51017917 | Msa0297330:intron | 35.0% | |
| TTCAATTCATGCCATCCAAA+GGG | - | chr2_3:51017926-51017945 | None:intergenic | 35.0% | |
| TTTCAATTCATGCCATCCAA+AGG | - | chr2_3:51017927-51017946 | None:intergenic | 35.0% | |
| GAATCACGTTTCTTGGAATT+AGG | + | chr2_3:51017950-51017969 | Msa0297330:intron | 35.0% | |
| ! | TTTCTTTTGGCCAGAAAAAG+TGG | + | chr2_3:51018063-51018082 | Msa0297330:intron | 35.0% |
| !!! | CTACTACTAACCACTTTTTC+TGG | - | chr2_3:51018076-51018095 | None:intergenic | 35.0% |
| ! | CATGTAAATGATTTTGCGCT+GGG | - | chr2_3:51018273-51018292 | None:intergenic | 35.0% |
| ! | TCATGTAAATGATTTTGCGC+TGG | - | chr2_3:51018274-51018293 | None:intergenic | 35.0% |
| ! | GTCTTACAGCCTTGTATATA+TGG | + | chr2_3:51018323-51018342 | Msa0297330:intron | 35.0% |
| TAACAGCAATACTAGGGAAA+CGG | - | chr2_3:51018563-51018582 | None:intergenic | 35.0% | |
| GGACTATAACAGCAATACTA+GGG | - | chr2_3:51018569-51018588 | None:intergenic | 35.0% | |
| TGGACTATAACAGCAATACT+AGG | - | chr2_3:51018570-51018589 | None:intergenic | 35.0% | |
| ! | TGTTGGTTAATGGTTCCTAA+AGG | + | chr2_3:51018704-51018723 | Msa0297330:intron | 35.0% |
| GTTGGTTAATGGTTCCTAAA+GGG | + | chr2_3:51018705-51018724 | Msa0297330:intron | 35.0% | |
| CCTAATATAATCAGATGCAC+AGG | - | chr2_3:51018844-51018863 | None:intergenic | 35.0% | |
| CCTGTGCATCTGATTATATT+AGG | + | chr2_3:51018841-51018860 | Msa0297330:intron | 35.0% | |
| CTCATGAGCTATTATTCCAA+AGG | - | chr2_3:51018921-51018940 | None:intergenic | 35.0% | |
| TAACCAGCATTGTGAATCAA+TGG | + | chr2_3:51018943-51018962 | Msa0297330:CDS | 35.0% | |
| !! | AATCCATTGATTCACAATGC+TGG | - | chr2_3:51018949-51018968 | None:intergenic | 35.0% |
| !! | GAATCAATGGATTGCTGTAA+AGG | + | chr2_3:51018956-51018975 | Msa0297330:CDS | 35.0% |
| TAACTCTTTGACAGCTTAAC+TGG | - | chr2_3:51019163-51019182 | None:intergenic | 35.0% | |
| CAAAATCGAAACGATTCCCA+TGG | + | chr2_3:51013556-51013575 | Msa0297330:exon | 40.0% | |
| ATGATGATAACCTCGTGTGA+TGG | - | chr2_3:51013665-51013684 | None:intergenic | 40.0% | |
| GCAGGTAATTGAAATGAGCA+TGG | - | chr2_3:51013747-51013766 | None:intergenic | 40.0% | |
| TATCTATAACCAAGGCTCCT+CGG | - | chr2_3:51013987-51014006 | None:intergenic | 40.0% | |
| CAAGGAGAATGTCAGGATTT+GGG | + | chr2_3:51014120-51014139 | Msa0297330:CDS | 40.0% | |
| AATTGAACGTTCTGGTGCTT+CGG | + | chr2_3:51014149-51014168 | Msa0297330:CDS | 40.0% | |
| GAGGATGTATGGGAAGAATA+TGG | + | chr2_3:51014177-51014196 | Msa0297330:CDS | 40.0% | |
| TAAAACACATGCGGAACTCA+TGG | + | chr2_3:51014227-51014246 | Msa0297330:CDS | 40.0% | |
| !! | TGGTACTGCTCTACTTTTGT+TGG | + | chr2_3:51014247-51014266 | Msa0297330:intron | 40.0% |
| !! | GGTACTGCTCTACTTTTGTT+GGG | + | chr2_3:51014248-51014267 | Msa0297330:intron | 40.0% |
| ! | TCTCCAAAATGTCACTTGTG+TGG | + | chr2_3:51014778-51014797 | Msa0297330:intron | 40.0% |
| ! | CTCCAAAATGTCACTTGTGT+GGG | + | chr2_3:51014779-51014798 | Msa0297330:intron | 40.0% |
| !! | CTTGATTATGATGGGTAGAG+TGG | - | chr2_3:51014864-51014883 | None:intergenic | 40.0% |
| GACTCGAAGCTTGATTATGA+TGG | - | chr2_3:51014873-51014892 | None:intergenic | 40.0% | |
| GTTCTGTGATTTAATCCCCT+AGG | + | chr2_3:51014976-51014995 | Msa0297330:intron | 40.0% | |
| GTATTAGATTCTCCACCTAG+GGG | - | chr2_3:51014994-51015013 | None:intergenic | 40.0% | |
| TAGACTTACAGTAACACGCT+CGG | - | chr2_3:51015053-51015072 | None:intergenic | 40.0% | |
| GTCGACACTATTTGATTCAG+TGG | - | chr2_3:51015251-51015270 | None:intergenic | 40.0% | |
| ! | CATGTTTCACATAGGCATTG+AGG | - | chr2_3:51015320-51015339 | None:intergenic | 40.0% |
| CATACCGACATGTTTCACAT+AGG | - | chr2_3:51015328-51015347 | None:intergenic | 40.0% | |
| TCTAACAGGCAAGTTCATCA+AGG | - | chr2_3:51015625-51015644 | None:intergenic | 40.0% | |
| AACTCAGTAACCTCTCTAAC+AGG | - | chr2_3:51015639-51015658 | None:intergenic | 40.0% | |
| AGAGACTTTGTTAGGAGGAT+GGG | - | chr2_3:51015747-51015766 | None:intergenic | 40.0% | |
| TAGAGACTTTGTTAGGAGGA+TGG | - | chr2_3:51015748-51015767 | None:intergenic | 40.0% | |
| !! | GCTTTAGAGACTTTGTTAGG+AGG | - | chr2_3:51015752-51015771 | None:intergenic | 40.0% |
| !! | GGAGCTTTAGAGACTTTGTT+AGG | - | chr2_3:51015755-51015774 | None:intergenic | 40.0% |
| TAATTCTGGTCCATCAACCA+GGG | + | chr2_3:51015888-51015907 | Msa0297330:intron | 40.0% | |
| ATGCAAAACGAGATAAACCC+TGG | - | chr2_3:51015908-51015927 | None:intergenic | 40.0% | |
| AGTAAGCTGTGCAGGATTTA+TGG | + | chr2_3:51015952-51015971 | Msa0297330:intron | 40.0% | |
| CAGGATTTATGGAGGATAGT+AGG | + | chr2_3:51015963-51015982 | Msa0297330:intron | 40.0% | |
| AGGATAGTAGGTTTGTCCTA+CGG | + | chr2_3:51015975-51015994 | Msa0297330:intron | 40.0% | |
| TTTCTCTCTCTTGATTTCGG+AGG | + | chr2_3:51016009-51016028 | Msa0297330:intron | 40.0% | |
| !!! | GCTCTAGACTTATTTTGCAC+AGG | + | chr2_3:51016140-51016159 | Msa0297330:intron | 40.0% |
| ATCATGAGCAAAACGCCAAA+AGG | - | chr2_3:51016182-51016201 | None:intergenic | 40.0% | |
| TGAGAACAGATTGTTAACCG+TGG | + | chr2_3:51016531-51016550 | Msa0297330:intron | 40.0% | |
| GAGAACAGATTGTTAACCGT+GGG | + | chr2_3:51016532-51016551 | Msa0297330:intron | 40.0% | |
| ! | TAATAGACTCGCCACTTTGA+AGG | - | chr2_3:51016558-51016577 | None:intergenic | 40.0% |
| AAAGTGGCGAGTCTATTAGA+TGG | + | chr2_3:51016560-51016579 | Msa0297330:CDS | 40.0% | |
| AAGTGGCGAGTCTATTAGAT+GGG | + | chr2_3:51016561-51016580 | Msa0297330:CDS | 40.0% | |
| !! | GAACCTTCAGCTTTTAGAGA+AGG | + | chr2_3:51016645-51016664 | Msa0297330:CDS | 40.0% |
| !! | GCTTTGTGAAAAGCATCCTA+TGG | + | chr2_3:51016709-51016728 | Msa0297330:intron | 40.0% |
| AGAAAGTCAGCAGAAAGCTT+TGG | + | chr2_3:51016879-51016898 | Msa0297330:CDS | 40.0% | |
| GTGATGAAAGAATGCCTGAA+AGG | + | chr2_3:51016986-51017005 | Msa0297330:CDS | 40.0% | |
| AGTTGTCAGATCAATTCCAC+CGG | - | chr2_3:51017128-51017147 | None:intergenic | 40.0% | |
| CAAGTTTCCAGATAAAGCTG+AGG | + | chr2_3:51017281-51017300 | Msa0297330:CDS | 40.0% | |
| GAATTGGTCATATCTCCTGT+AGG | + | chr2_3:51017406-51017425 | Msa0297330:intron | 40.0% | |
| CATGTGATATTTCGGAAGCA+CGG | - | chr2_3:51017493-51017512 | None:intergenic | 40.0% | |
| TATCAATCAGACCACCTAAG+AGG | - | chr2_3:51017634-51017653 | None:intergenic | 40.0% | |
| ! | TCCTTTTGCTTCGGATGATT+TGG | + | chr2_3:51017658-51017677 | Msa0297330:CDS | 40.0% |
| TCCAAATCATCCGAAGCAAA+AGG | - | chr2_3:51017662-51017681 | None:intergenic | 40.0% | |
| TCAATTCATGCCATCCAAAG+GGG | - | chr2_3:51017925-51017944 | None:intergenic | 40.0% | |
| TTCTGCTAACACCTCATATC+GGG | - | chr2_3:51018229-51018248 | None:intergenic | 40.0% | |
| CTTCTGCTAACACCTCATAT+CGG | - | chr2_3:51018230-51018249 | None:intergenic | 40.0% | |
| CACATGATAAGGAACATGTG+TGG | + | chr2_3:51018422-51018441 | Msa0297330:intron | 40.0% | |
| AGTGGAAATCAAATGTGCAG+TGG | - | chr2_3:51018590-51018609 | None:intergenic | 40.0% | |
| CTGCTCAAGAATTTCCCTTT+AGG | - | chr2_3:51018722-51018741 | None:intergenic | 40.0% | |
| TATAATCAGATGCACAGGGA+TGG | - | chr2_3:51018839-51018858 | None:intergenic | 40.0% | |
| !! | TCAATGGATTGCTGTAAAGG+AGG | + | chr2_3:51018959-51018978 | Msa0297330:CDS | 40.0% |
| AAGGAGGATGCTGAGAATAA+TGG | + | chr2_3:51018975-51018994 | Msa0297330:CDS | 40.0% | |
| AGGAGGATGCTGAGAATAAT+GGG | + | chr2_3:51018976-51018995 | Msa0297330:CDS | 40.0% | |
| ! | GAGAATAATGGGAATGCTGA+AGG | + | chr2_3:51018987-51019006 | Msa0297330:CDS | 40.0% |
| CATGTCAAACCTCCAAAGAT+TGG | - | chr2_3:51019111-51019130 | None:intergenic | 40.0% | |
| TTTGACAGCTTAACTGGTTG+AGG | - | chr2_3:51019157-51019176 | None:intergenic | 40.0% | |
| AATCGAAACGATTCCCATGG+CGG | + | chr2_3:51013559-51013578 | Msa0297330:exon | 45.0% | |
| GGAGGAAAAGGATGATGTGT+GGG | - | chr2_3:51013644-51013663 | None:intergenic | 45.0% | |
| TGGAGGAAAAGGATGATGTG+TGG | - | chr2_3:51013645-51013664 | None:intergenic | 45.0% | |
| ATGATAACCTCGTGTGATGG+AGG | - | chr2_3:51013662-51013681 | None:intergenic | 45.0% | |
| AGGCAAGAGCTTCCTTATCA+AGG | - | chr2_3:51013920-51013939 | None:intergenic | 45.0% | |
| GATAAGGAAGCTCTTGCCTT+TGG | + | chr2_3:51013921-51013940 | Msa0297330:CDS | 45.0% | |
| TCTCATGCAAGGAGAATGTC+AGG | + | chr2_3:51014113-51014132 | Msa0297330:CDS | 45.0% | |
| GCAAGGAGAATGTCAGGATT+TGG | + | chr2_3:51014119-51014138 | Msa0297330:CDS | 45.0% | |
| GAATGTCAGGATTTGGGTGA+TGG | + | chr2_3:51014126-51014145 | Msa0297330:CDS | 45.0% | |
| !! | GGTGATGGAATTGAACGTTC+TGG | + | chr2_3:51014141-51014160 | Msa0297330:CDS | 45.0% |
| !! | TTCGGTTGGTGAGGATGTAT+GGG | + | chr2_3:51014167-51014186 | Msa0297330:CDS | 45.0% |
| AGCTGCCAGTAAAACACATG+CGG | + | chr2_3:51014218-51014237 | Msa0297330:CDS | 45.0% | |
| ! | GAGTTCCGCATGTGTTTTAC+TGG | - | chr2_3:51014226-51014245 | None:intergenic | 45.0% |
| !! | TGCTATAACCTGGTAGTGGT+CGG | + | chr2_3:51014753-51014772 | Msa0297330:intron | 45.0% |
| ! | AGCCCACACAAGTGACATTT+TGG | - | chr2_3:51014784-51014803 | None:intergenic | 45.0% |
| !! | TATGATGGGTAGAGTGGTCA+AGG | - | chr2_3:51014858-51014877 | None:intergenic | 45.0% |
| CTGTGATTTAATCCCCTAGG+TGG | + | chr2_3:51014979-51014998 | Msa0297330:intron | 45.0% | |
| GATGAACTTGCCTGTTAGAG+AGG | + | chr2_3:51015626-51015645 | Msa0297330:intron | 45.0% | |
| CTTTGTTAGGAGGATGGGAA+AGG | - | chr2_3:51015742-51015761 | None:intergenic | 45.0% | |
| GTAATTCTGGTCCATCAACC+AGG | + | chr2_3:51015887-51015906 | Msa0297330:intron | 45.0% | |
| ACGAGATAAACCCTGGTTGA+TGG | - | chr2_3:51015901-51015920 | None:intergenic | 45.0% | |
| TTTCACAGAGTAAGCTGTGC+AGG | + | chr2_3:51015944-51015963 | Msa0297330:intron | 45.0% | |
| AAGCTGTGCAGGATTTATGG+AGG | + | chr2_3:51015955-51015974 | Msa0297330:intron | 45.0% | |
| ATGAGCAAAACGCCAAAAGG+TGG | - | chr2_3:51016179-51016198 | None:intergenic | 45.0% | |
| ! | GTGTGTGGGCTCTTCTTTTA+TGG | - | chr2_3:51016366-51016385 | None:intergenic | 45.0% |
| AGGCTGGTATATCTGTGTGT+GGG | - | chr2_3:51016380-51016399 | None:intergenic | 45.0% | |
| TGCGTGTTGTGCTGTAAACT+AGG | + | chr2_3:51016453-51016472 | Msa0297330:intron | 45.0% | |
| GCACAAGAAACAATCTGGGA+AGG | + | chr2_3:51016738-51016757 | Msa0297330:intron | 45.0% | |
| TGTGGATCATGGTACCTTTC+AGG | - | chr2_3:51017003-51017022 | None:intergenic | 45.0% | |
| AAATGGAGGGTTGTGGATCA+TGG | - | chr2_3:51017014-51017033 | None:intergenic | 45.0% | |
| TGATGCAAAATGGAGGGTTG+TGG | - | chr2_3:51017021-51017040 | None:intergenic | 45.0% | |
| CTATTCATCAATCAGTCCGG+TGG | + | chr2_3:51017109-51017128 | Msa0297330:intron | 45.0% | |
| TGGTCATATCTCCTGTAGGT+CGG | + | chr2_3:51017410-51017429 | Msa0297330:intron | 45.0% | |
| CGTGCTTCCGAAATATCACA+TGG | + | chr2_3:51017491-51017510 | Msa0297330:CDS | 45.0% | |
| TGGAAGCAAGAAATGCAGTC+TGG | + | chr2_3:51017678-51017697 | Msa0297330:CDS | 45.0% | |
| ! | CACCTTGTTTCGGTTCTTGT+CGG | + | chr2_3:51017764-51017783 | Msa0297330:CDS | 45.0% |
| TTCCGACAAGAACCGAAACA+AGG | - | chr2_3:51017769-51017788 | None:intergenic | 45.0% | |
| GACAGGAGTCAACACATTGT+TGG | - | chr2_3:51017823-51017842 | None:intergenic | 45.0% | |
| CAATTCATGCCATCCAAAGG+GGG | - | chr2_3:51017924-51017943 | None:intergenic | 45.0% | |
| ! | ACAATCATCGTTGGTTGCAG+TGG | - | chr2_3:51018608-51018627 | None:intergenic | 45.0% |
| TGCAACCAACGATGATTGTG+TGG | + | chr2_3:51018609-51018628 | Msa0297330:intron | 45.0% | |
| AACAGCCACACAATCATCGT+TGG | - | chr2_3:51018617-51018636 | None:intergenic | 45.0% | |
| AGGGATGGCTAGTAACAAGA+TGG | - | chr2_3:51018824-51018843 | None:intergenic | 45.0% | |
| CAGTTGTCCAGACCAATCTT+TGG | + | chr2_3:51019096-51019115 | Msa0297330:three_prime_UTR | 45.0% | |
| TTGTCCAGACCAATCTTTGG+AGG | + | chr2_3:51019099-51019118 | Msa0297330:three_prime_UTR | 45.0% | |
| ! | CAAACCTCCAAAGATTGGTC+TGG | - | chr2_3:51019106-51019125 | None:intergenic | 45.0% |
| ! | TCCTTTTCCTCCATCACACG+AGG | + | chr2_3:51013652-51013671 | Msa0297330:CDS | 50.0% |
| ! | ACCTCGTGTGATGGAGGAAA+AGG | - | chr2_3:51013656-51013675 | None:intergenic | 50.0% |
| !! | CTTCGGTTGGTGAGGATGTA+TGG | + | chr2_3:51014166-51014185 | Msa0297330:CDS | 50.0% |
| GTGGAACTTCATGGCAAGCA+AGG | - | chr2_3:51015232-51015251 | None:intergenic | 50.0% | |
| CAGGCTGGTATATCTGTGTG+TGG | - | chr2_3:51016381-51016400 | None:intergenic | 50.0% | |
| TTAACCGTGGGCCTTCAAAG+TGG | + | chr2_3:51016544-51016563 | Msa0297330:CDS | 50.0% | |
| !! | CGAGTCTATTAGATGGGCTG+AGG | + | chr2_3:51016567-51016586 | Msa0297330:CDS | 50.0% |
| AAACCAAGCTTCAGCATGGG+TGG | - | chr2_3:51016916-51016935 | None:intergenic | 50.0% | |
| ACCCATGCTGAAGCTTGGTT+TGG | + | chr2_3:51016915-51016934 | Msa0297330:CDS | 50.0% | |
| GCCAAACCAAGCTTCAGCAT+GGG | - | chr2_3:51016919-51016938 | None:intergenic | 50.0% | |
| TGCCAAACCAAGCTTCAGCA+TGG | - | chr2_3:51016920-51016939 | None:intergenic | 50.0% | |
| ! | TGCGGTACCTCAGCTTTATC+TGG | - | chr2_3:51017291-51017310 | None:intergenic | 50.0% |
| GGTCATATCTCCTGTAGGTC+GGG | + | chr2_3:51017411-51017430 | Msa0297330:intron | 50.0% | |
| ! | CTAAGAGGCACGAATCTGGA+AGG | - | chr2_3:51017619-51017638 | None:intergenic | 50.0% |
| CTTCCAGATTCGTGCCTCTT+AGG | + | chr2_3:51017617-51017636 | Msa0297330:intron | 50.0% | |
| CGACAAGAACCGAAACAAGG+TGG | - | chr2_3:51017766-51017785 | None:intergenic | 50.0% | |
| !! | CAATGTGTTGACTCCTGTCC+TGG | + | chr2_3:51017824-51017843 | Msa0297330:CDS | 50.0% |
| ATCTGCTGTTGAACCAGGAC+AGG | - | chr2_3:51017840-51017859 | None:intergenic | 50.0% | |
| CTAGCATCTGCTGTTGAACC+AGG | - | chr2_3:51017845-51017864 | None:intergenic | 50.0% | |
| GGAAACGGAGTCACATGTCT+GGG | - | chr2_3:51018548-51018567 | None:intergenic | 50.0% | |
| GCTTAACTGGTTGAGGCTTC+AGG | - | chr2_3:51019150-51019169 | None:intergenic | 50.0% | |
| GGATTTGTCGGAACCGCCAT+GGG | - | chr2_3:51013575-51013594 | None:intergenic | 55.0% | |
| TGGATTTGTCGGAACCGCCA+TGG | - | chr2_3:51013576-51013595 | None:intergenic | 55.0% | |
| CTTGCCTTTGGATTCCGCCT+CGG | + | chr2_3:51013933-51013952 | Msa0297330:CDS | 55.0% | |
| TTGACCGAGGCGGAATCCAA+AGG | - | chr2_3:51013940-51013959 | None:intergenic | 55.0% | |
| TTGGATTCCGCCTCGGTCAA+CGG | + | chr2_3:51013940-51013959 | Msa0297330:CDS | 55.0% | |
| CTCGGTCAACGGAGTTGCTT+CGG | + | chr2_3:51013951-51013970 | Msa0297330:CDS | 55.0% | |
| TAACCAAGGCTCCTCGGCTA+GGG | - | chr2_3:51013981-51014000 | None:intergenic | 55.0% | |
| ATAACCAAGGCTCCTCGGCT+AGG | - | chr2_3:51013982-51014001 | None:intergenic | 55.0% | |
| GAACGTTCTGGTGCTTCGGT+TGG | + | chr2_3:51014153-51014172 | Msa0297330:CDS | 55.0% | |
| ! | TTCTGGTGCTTCGGTTGGTG+AGG | + | chr2_3:51014158-51014177 | Msa0297330:CDS | 55.0% |
| CTTCCACCCATGCTGAAGCT+TGG | + | chr2_3:51016910-51016929 | Msa0297330:CDS | 55.0% | |
| ! | CCACCTAAGAGGCACGAATC+TGG | - | chr2_3:51017623-51017642 | None:intergenic | 55.0% |
| CCAGATTCGTGCCTCTTAGG+TGG | + | chr2_3:51017620-51017639 | Msa0297330:intron | 55.0% | |
| !! | ATTCTGAGGCCCCCTTTGGA+TGG | + | chr2_3:51017912-51017931 | Msa0297330:intron | 55.0% |
| GGGAAACGGAGTCACATGTC+TGG | - | chr2_3:51018549-51018568 | None:intergenic | 55.0% | |
| AGCAACTCCGTTGACCGAGG+CGG | - | chr2_3:51013950-51013969 | None:intergenic | 60.0% | |
| CGAAGCAACTCCGTTGACCG+AGG | - | chr2_3:51013953-51013972 | None:intergenic | 60.0% | |
| TGGAGAGACCGACCACTACC+AGG | - | chr2_3:51014764-51014783 | None:intergenic | 60.0% | |
| ! | CTCGCCACTTTGAAGGCCCA+CGG | - | chr2_3:51016551-51016570 | None:intergenic | 60.0% |
| CACAGCAGTTCCCGACCTAC+AGG | - | chr2_3:51017424-51017443 | None:intergenic | 60.0% | |
| !! | TGCGATTCTGAGGCCCCCTT+TGG | + | chr2_3:51017908-51017927 | Msa0297330:intron | 60.0% |
| GAGCTCGAGCACGAGCACGA+TGG | + | chr2_3:51013617-51013636 | Msa0297330:CDS | 65.0% | |
| GCTTCGGATGACCCTAGCCG+AGG | + | chr2_3:51013967-51013986 | Msa0297330:CDS | 65.0% | |
| TGACCCTAGCCGAGGAGCCT+TGG | + | chr2_3:51013975-51013994 | Msa0297330:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 51013494 | 51019206 | 51013494 | ID=Msa0297330;Name=Msa0297330 |
| chr2_3 | mRNA | 51013494 | 51019206 | 51013494 | ID=Msa0297330-mRNA-1;Parent=Msa0297330;Name=Msa0297330-mRNA-1;_AED=0.08;_eAED=0.08;_QI=81|1|1|1|1|1|10|136|523 |
| chr2_3 | exon | 51013494 | 51013673 | 51013494 | ID=Msa0297330-mRNA-1:exon:16105;Parent=Msa0297330-mRNA-1 |
| chr2_3 | exon | 51013874 | 51014248 | 51013874 | ID=Msa0297330-mRNA-1:exon:16106;Parent=Msa0297330-mRNA-1 |
| chr2_3 | exon | 51014998 | 51015063 | 51014998 | ID=Msa0297330-mRNA-1:exon:16107;Parent=Msa0297330-mRNA-1 |
| chr2_3 | exon | 51015203 | 51015342 | 51015203 | ID=Msa0297330-mRNA-1:exon:16108;Parent=Msa0297330-mRNA-1 |
| chr2_3 | exon | 51016540 | 51016666 | 51016540 | ID=Msa0297330-mRNA-1:exon:16109;Parent=Msa0297330-mRNA-1 |
| chr2_3 | exon | 51016853 | 51017007 | 51016853 | ID=Msa0297330-mRNA-1:exon:16110;Parent=Msa0297330-mRNA-1 |
| chr2_3 | exon | 51017167 | 51017302 | 51017167 | ID=Msa0297330-mRNA-1:exon:16111;Parent=Msa0297330-mRNA-1 |
| chr2_3 | exon | 51017428 | 51017512 | 51017428 | ID=Msa0297330-mRNA-1:exon:16112;Parent=Msa0297330-mRNA-1 |
| chr2_3 | exon | 51017624 | 51017874 | 51017624 | ID=Msa0297330-mRNA-1:exon:16113;Parent=Msa0297330-mRNA-1 |
| chr2_3 | exon | 51018933 | 51019206 | 51018933 | ID=Msa0297330-mRNA-1:exon:16114;Parent=Msa0297330-mRNA-1 |
| chr2_3 | five_prime_UTR | 51013494 | 51013574 | 51013494 | ID=Msa0297330-mRNA-1:five_prime_utr;Parent=Msa0297330-mRNA-1 |
| chr2_3 | CDS | 51013575 | 51013673 | 51013575 | ID=Msa0297330-mRNA-1:cds;Parent=Msa0297330-mRNA-1 |
| chr2_3 | CDS | 51013874 | 51014248 | 51013874 | ID=Msa0297330-mRNA-1:cds;Parent=Msa0297330-mRNA-1 |
| chr2_3 | CDS | 51014998 | 51015063 | 51014998 | ID=Msa0297330-mRNA-1:cds;Parent=Msa0297330-mRNA-1 |
| chr2_3 | CDS | 51015203 | 51015342 | 51015203 | ID=Msa0297330-mRNA-1:cds;Parent=Msa0297330-mRNA-1 |
| chr2_3 | CDS | 51016540 | 51016666 | 51016540 | ID=Msa0297330-mRNA-1:cds;Parent=Msa0297330-mRNA-1 |
| chr2_3 | CDS | 51016853 | 51017007 | 51016853 | ID=Msa0297330-mRNA-1:cds;Parent=Msa0297330-mRNA-1 |
| chr2_3 | CDS | 51017167 | 51017302 | 51017167 | ID=Msa0297330-mRNA-1:cds;Parent=Msa0297330-mRNA-1 |
| chr2_3 | CDS | 51017428 | 51017512 | 51017428 | ID=Msa0297330-mRNA-1:cds;Parent=Msa0297330-mRNA-1 |
| chr2_3 | CDS | 51017624 | 51017874 | 51017624 | ID=Msa0297330-mRNA-1:cds;Parent=Msa0297330-mRNA-1 |
| chr2_3 | CDS | 51018933 | 51019070 | 51018933 | ID=Msa0297330-mRNA-1:cds;Parent=Msa0297330-mRNA-1 |
| chr2_3 | three_prime_UTR | 51019071 | 51019206 | 51019071 | ID=Msa0297330-mRNA-1:three_prime_utr;Parent=Msa0297330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
