AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0297570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0297570 MtrunA17_Chr1g0203051 49.155 592 297 1 25 616 34 621 0.0 635
Msa0297570 MtrunA17_Chr2g0287651 34.218 678 436 4 74 749 75 744 9.75e-133 416
Msa0297570 MtrunA17_Chr5g0448761 30.635 630 418 10 79 691 65 692 6.51e-101 330
Msa0297570 MtrunA17_Chr1g0202341 32.143 560 367 6 79 630 56 610 1.94e-100 326
Msa0297570 MtrunA17_Chr8g0363841 29.947 561 380 6 81 632 24 580 5.99e-86 287
Msa0297570 MtrunA17_Chr1g0198761 28.255 722 457 18 80 764 53 750 3.41e-83 281
Msa0297570 MtrunA17_Chr3g0082121 28.443 668 425 13 14 672 12 635 2.65e-80 272
Msa0297570 MtrunA17_Chr2g0324011 27.788 565 387 9 80 632 16 571 4.07e-76 258
Msa0297570 MtrunA17_Chr2g0308841 49.091 220 112 0 409 628 7 226 6.97e-76 247
Msa0297570 MtrunA17_Chr6g0458391 27.469 557 375 11 80 629 231 765 5.99e-71 248
Msa0297570 MtrunA17_Chr6g0458391 29.358 218 111 8 33 222 47 249 2.81e-15 80.1
Msa0297570 MtrunA17_Chr2g0296781 28.852 662 429 17 80 718 3 645 6.19e-71 247
Msa0297570 MtrunA17_Chr5g0441581 27.357 647 434 15 37 670 1 624 7.54e-70 243
Msa0297570 MtrunA17_Chr1g0203721 27.070 628 426 13 80 686 69 685 2.18e-68 243
Msa0297570 MtrunA17_Chr5g0431001 33.182 440 269 10 72 491 61 495 4.53e-67 231
Msa0297570 MtrunA17_Chr6g0477261 32.522 452 274 10 198 629 5 445 4.74e-66 232
Msa0297570 MtrunA17_Chr5g0448511 29.231 390 270 2 249 633 13 401 1.17e-64 226
Msa0297570 MtrunA17_Chr3g0118611 29.032 434 300 3 248 676 118 548 1.67e-64 230
Msa0297570 MtrunA17_Chr1g0207551 27.817 568 378 14 78 629 38 589 2.04e-63 228
Msa0297570 MtrunA17_Chr2g0287061 28.623 559 352 13 79 632 188 704 2.46e-63 227
Msa0297570 MtrunA17_Chr2g0329031 27.402 562 380 12 77 628 17 560 1.78e-61 221
Msa0297570 MtrunA17_Chr2g0276841 25.487 565 389 12 80 626 76 626 1.37e-60 218
Msa0297570 MtrunA17_Chr3g0080351 26.861 618 397 15 78 673 80 664 1.06e-59 218
Msa0297570 MtrunA17_Chr5g0440451 25.258 582 381 12 80 631 49 606 2.75e-58 214
Msa0297570 MtrunA17_Chr2g0291581 26.702 573 385 15 72 629 69 621 2.90e-57 208
Msa0297570 MtrunA17_Chr2g0290391 26.049 572 376 12 80 624 57 608 5.89e-55 201
Msa0297570 MtrunA17_Chr2g0291591 27.656 546 354 14 44 570 36 559 4.86e-53 194
Msa0297570 MtrunA17_Chr2g0294841 25.318 628 402 16 29 624 11 603 2.13e-52 195
Msa0297570 MtrunA17_Chr1g0196541 26.923 572 378 12 80 629 3 556 3.97e-52 194
Msa0297570 MtrunA17_Chr1g0171741 46.193 197 95 4 11 203 72 261 1.57e-48 172
Msa0297570 MtrunA17_Chr1g0164591 30.263 304 200 3 163 461 11 307 8.20e-43 158
Msa0297570 MtrunA17_Chr8g0389811 38.889 180 98 2 18 185 16 195 1.33e-34 131
Msa0297570 MtrunA17_Chr2g0331371 40.645 155 84 2 56 210 37 183 1.41e-31 122
Msa0297570 MtrunA17_Chr7g0258861 27.778 288 200 6 80 362 16 300 1.17e-28 117
Msa0297570 MtrunA17_Chr6g0473421 48.421 95 49 0 56 150 37 131 5.95e-26 104
Msa0297570 MtrunA17_Chr8g0340801 40.952 105 62 0 185 289 1 105 3.47e-22 92.0
Msa0297570 MtrunA17_Chr1g0172931 41.284 109 63 1 48 156 51 158 8.25e-22 92.8
Msa0297570 MtrunA17_Chr1g0149131 30.909 110 71 1 353 457 1 110 2.15e-13 67.8
Msa0297570 MtrunA17_Chr4g0075451 27.011 174 122 3 232 403 48 218 1.14e-11 65.9
Msa0297570 MtrunA17_Chr4g0033611 31.638 177 87 8 28 177 7 176 4.07e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0297570 AT4G38180.1 30.285 667 435 15 11 654 2 661 2.63e-96 318
Msa0297570 AT3G06250.2 28.947 570 346 13 68 629 186 704 1.61e-70 247
Msa0297570 AT3G06250.1 28.947 570 346 13 68 629 186 704 1.61e-70 247
Msa0297570 AT3G06250.3 28.947 570 346 13 68 629 186 704 1.61e-70 247
Msa0297570 AT5G18960.2 28.988 583 334 17 67 629 206 728 1.89e-69 244
Msa0297570 AT5G18960.1 28.988 583 334 17 67 629 206 728 1.89e-69 244
Msa0297570 AT4G15090.1 26.603 624 402 15 78 673 55 650 2.08e-64 231
Msa0297570 AT4G15090.5 26.603 624 402 15 78 673 55 650 2.08e-64 231
Msa0297570 AT4G15090.3 26.603 624 402 15 78 673 55 650 2.08e-64 231
Msa0297570 AT4G15090.2 26.603 624 402 15 78 673 55 650 2.08e-64 231
Msa0297570 AT4G15090.4 26.603 624 402 15 78 673 55 650 2.08e-64 231
Msa0297570 AT3G22170.2 26.016 615 406 13 78 673 74 658 5.49e-63 227
Msa0297570 AT3G22170.1 26.016 615 406 13 78 673 74 658 5.49e-63 227
Msa0297570 AT2G27110.2 25.490 561 381 11 78 632 53 582 9.39e-62 224
Msa0297570 AT2G27110.1 25.490 561 381 11 78 632 53 582 9.39e-62 224
Msa0297570 AT1G10240.2 26.250 560 391 12 80 626 54 604 6.92e-61 218
Msa0297570 AT1G10240.1 26.250 560 391 12 80 626 54 604 6.92e-61 218
Msa0297570 AT1G52520.1 27.444 583 357 16 79 629 90 638 4.77e-57 208
Msa0297570 AT5G28530.1 26.178 573 386 12 80 628 61 620 1.38e-56 206
Msa0297570 AT5G28530.3 26.252 579 374 14 80 628 61 616 5.52e-56 204
Msa0297570 AT5G28530.2 26.252 579 374 14 80 628 61 616 5.52e-56 204
Msa0297570 AT1G76320.3 27.289 568 371 14 79 629 2 544 1.20e-55 203
Msa0297570 AT1G76320.1 27.289 568 371 14 79 629 2 544 2.10e-55 204
Msa0297570 AT1G76320.4 27.289 568 371 14 79 629 2 544 2.10e-55 204
Msa0297570 AT1G76320.2 27.289 568 371 14 79 629 2 544 2.37e-55 204
Msa0297570 AT2G27110.3 27.110 391 275 5 248 632 51 437 3.20e-55 203
Msa0297570 AT1G80010.1 28.473 583 380 16 71 629 92 661 5.49e-55 202
Msa0297570 AT2G32250.5 24.212 603 388 13 79 668 43 589 1.78e-49 187
Msa0297570 AT2G32250.8 24.212 603 388 13 79 668 2 548 1.93e-49 187
Msa0297570 AT2G32250.7 24.212 603 388 13 79 668 2 548 2.14e-49 187
Msa0297570 AT2G32250.6 24.212 603 388 13 79 668 43 589 2.84e-49 187
Msa0297570 AT2G32250.1 24.212 603 388 13 79 668 43 589 2.84e-49 187
Msa0297570 AT2G32250.3 24.212 603 388 13 79 668 43 589 2.84e-49 187
Msa0297570 AT2G32250.2 23.987 617 372 13 79 668 43 589 2.85e-49 187
Msa0297570 AT2G32250.4 23.987 617 372 13 79 668 43 589 2.85e-49 187
Msa0297570 AT4G38170.1 27.809 356 250 3 280 629 45 399 2.90e-49 183
Msa0297570 AT4G19990.3 24.884 647 401 17 79 692 26 620 1.03e-46 179
Msa0297570 AT4G19990.4 24.884 647 401 17 79 692 26 620 1.03e-46 179
Msa0297570 AT4G19990.5 24.884 647 401 17 79 692 26 620 1.23e-46 178
Msa0297570 AT4G19990.6 24.884 647 401 17 79 692 26 620 1.47e-46 178
Msa0297570 AT4G19990.2 24.884 647 401 17 79 692 26 620 1.47e-46 178
Msa0297570 AT4G19990.7 24.884 647 401 17 79 692 40 634 1.51e-46 178
Msa0297570 AT4G19990.1 23.974 609 387 15 112 692 3 563 1.72e-41 162
Msa0297570 AT5G28530.4 23.614 559 355 14 80 628 61 557 5.79e-40 157
Msa0297570 AT5G28530.5 23.717 565 343 16 80 628 61 553 1.85e-39 155

Find 201 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAGAGTGGTAACTGATTT+TGG 0.153996 2_3:+51234365 None:intergenic
TTATGTGAATCCCAATATTT+TGG 0.174029 2_3:+51229316 None:intergenic
CAAATATAACGTTATGATTA+TGG 0.220259 2_3:+51230268 None:intergenic
ATAAGCCTCTTCCAAAATAT+TGG 0.226456 2_3:-51229327 Msa0297570:CDS
CAGTTGGAATACAATGTTTA+TGG 0.237348 2_3:-51230369 Msa0297570:CDS
CGAGCATATTATTGCACTAT+TGG 0.263946 2_3:-51229434 Msa0297570:CDS
CTGAATTTGTGGGTCGGTTC+AGG 0.267785 2_3:-51230035 Msa0297570:CDS
CCTTGAAACGCATGTAATTA+AGG 0.299268 2_3:+51229752 None:intergenic
GTCTCGATTCTATAGTTCTT+TGG 0.305028 2_3:-51230604 Msa0297570:CDS
TACGTGAATTGTTGCTAAAT+AGG 0.306357 2_3:-51228229 Msa0297570:three_prime_UTR
AAGATGATTAAAAGCAATAA+AGG 0.314816 2_3:-51230921 Msa0297570:CDS
CTGCCATAGACAAGGGTTTA+GGG 0.319412 2_3:-51230874 Msa0297570:CDS
CTGAACCGACCCACAAATTC+AGG 0.320770 2_3:+51230036 None:intergenic
TAAACCATTCACGGATTGTT+GGG 0.328289 2_3:+51234172 None:intergenic
AATGAAGAATGCTATTAAAA+AGG 0.328811 2_3:-51230130 Msa0297570:CDS
AATCATAACGTTATATTTGC+TGG 0.332689 2_3:-51230264 Msa0297570:CDS
CATGGGGACTTGATCCCTTC+AGG 0.334509 2_3:+51231036 None:intergenic
ATTATGATCTTGGTGAGTTT+CGG 0.343046 2_3:-51229996 Msa0297570:CDS
TAAGCCTCTTCCAAAATATT+GGG 0.343348 2_3:-51229326 Msa0297570:CDS
TCTGCCATAGACAAGGGTTT+AGG 0.350465 2_3:-51230875 Msa0297570:CDS
GCACATCCTTTACTTCTTAC+CGG 0.360870 2_3:+51229097 None:intergenic
TTACCTATTATGTTGAGCTT+TGG 0.362228 2_3:-51228290 Msa0297570:three_prime_UTR
CCTCCCTAAACCCTTGTCTA+TGG 0.364704 2_3:+51230871 None:intergenic
TCAGGAGGGTATGAAAAGAT+AGG 0.369722 2_3:-51230573 Msa0297570:CDS
CGTTGGAATTCCTGAATTTG+TGG 0.370745 2_3:-51230046 Msa0297570:CDS
AGTCCAAAGCTCAACATAAT+AGG 0.372572 2_3:+51228287 None:intergenic
TCAACAAATTCTCTGATGAT+TGG 0.374918 2_3:+51228460 None:intergenic
CAAGGGTTTAGGGAGGATAG+AGG 0.385779 2_3:-51230864 Msa0297570:CDS
GTAGACTTGAACACCTGTTT+TGG 0.386376 2_3:-51230407 Msa0297570:CDS
ACTGAAATGGTTGATACATT+TGG 0.389032 2_3:-51229964 Msa0297570:CDS
CTCAAATTTCCTTGTCTCAT+GGG 0.391555 2_3:+51231019 None:intergenic
TGGATGTGAAGCAAAATTTC+GGG 0.393377 2_3:-51230793 Msa0297570:CDS
AACTGGTATGCTAGAATGAA+TGG 0.398717 2_3:-51230963 Msa0297570:CDS
ATCAATATATGTAATTTCTT+CGG 0.400227 2_3:+51231085 None:intergenic
AGTTCTTTGGCAAACCAATC+AGG 0.400318 2_3:-51230591 Msa0297570:CDS
CAAATATCATTGTCCCTTAG+TGG 0.402765 2_3:-51230310 Msa0297570:CDS
CAGAACTACCTCCCGGGTTG+AGG 0.403771 2_3:-51229851 Msa0297570:CDS
TCCACTCCCGTTTAGATGCT+TGG 0.407392 2_3:+51229530 None:intergenic
TGAAATCTTGTTTGTAGTAC+CGG 0.408808 2_3:+51229694 None:intergenic
AGATGATTAAAAGCAATAAA+GGG 0.410338 2_3:-51230920 Msa0297570:CDS
CACAATCTATGATAAGCATT+TGG 0.411893 2_3:+51230102 None:intergenic
CTGAAATGGTTGATACATTT+GGG 0.415729 2_3:-51229963 Msa0297570:CDS
TTGTTGTGGCAGGGACTAGA+AGG 0.416156 2_3:-51231188 Msa0297570:intron
CTGGGTTCAGAACTACCTCC+CGG 0.421640 2_3:-51229858 Msa0297570:CDS
TGTTCTACTTGTAGAGAATT+CGG 0.421760 2_3:-51229028 Msa0297570:CDS
GTGGATGTGAAGCAAAATTT+CGG 0.423877 2_3:-51230794 Msa0297570:CDS
TGCAAGAAGATGGAGTCATT+TGG 0.424186 2_3:-51229466 Msa0297570:CDS
TCTTTATGCTTGTCATCTAA+AGG 0.428350 2_3:-51228203 Msa0297570:three_prime_UTR
TCTTGCACGGTCTGCAGATA+TGG 0.428535 2_3:-51229608 Msa0297570:CDS
TAATACCGTCACACCAAAAC+AGG 0.430331 2_3:+51230394 None:intergenic
TGAGGGGTTACATTCAGAAA+TGG 0.433282 2_3:-51229833 Msa0297570:CDS
TTCTTCTAATTACGGTGATC+CGG 0.435140 2_3:-51229713 Msa0297570:CDS
CTAGGTGCCACCAGAGTCTT+CGG 0.438729 2_3:+51229388 None:intergenic
GTAAGTACCAAGCATCTAAA+CGG 0.438925 2_3:-51229537 Msa0297570:CDS
GAGGGGTTACATTCAGAAAT+GGG 0.440826 2_3:-51229832 Msa0297570:CDS
CCATCAGTAATGACAGATAT+AGG 0.442377 2_3:+51230162 None:intergenic
CCTTAATTACATGCGTTTCA+AGG 0.443433 2_3:-51229752 Msa0297570:CDS
TCATAAAATTAAACCATTCA+CGG 0.444067 2_3:+51234163 None:intergenic
TGGCTTATGAGTTCTATAAC+TGG 0.448330 2_3:-51230980 Msa0297570:CDS
TTCACATCCACACCGAGTCT+CGG 0.449810 2_3:+51230806 None:intergenic
ACTCAAATTTCCTTGTCTCA+TGG 0.450621 2_3:+51231018 None:intergenic
TTAGCATGATGTCGACGTAT+TGG 0.451740 2_3:+51228986 None:intergenic
AGAACTACCTCCCGGGTTGA+GGG 0.453294 2_3:-51229850 Msa0297570:CDS
CCTTTACTTCTTACCGGAGC+AGG 0.454778 2_3:+51229103 None:intergenic
GACTAGAAGGCTTGTCAGAT+GGG 0.454938 2_3:-51231175 Msa0297570:CDS
AAGGATATATATAATCAGAT+AGG 0.456945 2_3:-51230540 Msa0297570:CDS
CAAGTGTTCTTGCAAGAAGA+TGG 0.456949 2_3:-51229476 Msa0297570:CDS
CACTTGAACACATCATCATC+TGG 0.458537 2_3:+51229493 None:intergenic
CAAAGCATGGAGCGTTGTGC+TGG 0.460157 2_3:-51229673 Msa0297570:CDS
TATTCGTGTTGAACAAAGTT+CGG 0.469680 2_3:+51228159 None:intergenic
TTGGCATTTGATGCAACATA+TGG 0.469717 2_3:-51230339 Msa0297570:CDS
CTTATCATAGATTGTGTGCT+TGG 0.471231 2_3:-51230095 Msa0297570:CDS
CATAAACATTGTATTCCAAC+TGG 0.473084 2_3:+51230370 None:intergenic
TCGGCGCAAGTGGACTGAAA+TGG 0.474417 2_3:-51229977 Msa0297570:CDS
ATGTTGGGTGATTATGATCT+TGG 0.475526 2_3:-51230006 Msa0297570:CDS
CGTCACTTACTCGGAAGAAA+AGG 0.476403 2_3:-51229063 Msa0297570:CDS
CTTTAGCTTCGTCACTTACT+CGG 0.477552 2_3:-51229072 Msa0297570:CDS
CTGATGATTGGTCTCTTGAA+AGG 0.479719 2_3:+51228472 None:intergenic
TGAACGACATGTTGAAGGTT+GGG 0.479986 2_3:-51230635 Msa0297570:CDS
CGGTTCAGGATATGCATGTT+GGG 0.481144 2_3:-51230021 Msa0297570:CDS
TTGTTTGAACATATTTGAGA+TGG 0.482088 2_3:-51231382 Msa0297570:exon
CGGGTTTACACTCACGCTTA+CGG 0.484549 2_3:+51230826 None:intergenic
TGATGATTTCAATGATCATA+TGG 0.490037 2_3:-51229227 Msa0297570:CDS
TCACATCCACACCGAGTCTC+GGG 0.490046 2_3:+51230807 None:intergenic
GGAGAGGAAACTGATTATTG+AGG 0.496472 2_3:+51234386 None:intergenic
GTTGGAATTCCTGAATTTGT+GGG 0.498209 2_3:-51230045 Msa0297570:CDS
TAAGTACCAAGCATCTAAAC+GGG 0.498777 2_3:-51229536 Msa0297570:CDS
AAAGATAGGGTTTCGAAAGA+AGG 0.498787 2_3:-51230559 Msa0297570:CDS
GATATTGAGGGATCCTGCTC+CGG 0.506504 2_3:-51229116 Msa0297570:CDS
TTAAACCATTCACGGATTGT+TGG 0.506733 2_3:+51234171 None:intergenic
TCGGTTCAGGATATGCATGT+TGG 0.508996 2_3:-51230022 Msa0297570:CDS
TGGCAGTTTCTCAAAGTCAC+AGG 0.510246 2_3:+51228261 None:intergenic
GGAAGAAAAGGAAGCGAACT+CGG 0.510589 2_3:-51229051 Msa0297570:CDS
TCATCAGAGAATTTGTTGAA+TGG 0.514239 2_3:-51228456 Msa0297570:CDS
ATGAACGACATGTTGAAGGT+TGG 0.516485 2_3:-51230636 Msa0297570:CDS
TGCTAGAATGAATGGGTTTG+CGG 0.520491 2_3:-51230955 Msa0297570:CDS
ACCTTTGTCTGCCATAGACA+AGG 0.522203 2_3:-51230882 Msa0297570:CDS
CCTGCTCCGGTAAGAAGTAA+AGG 0.527933 2_3:-51229103 Msa0297570:CDS
ACATGTTGAAGGTTGGGATA+GGG 0.527977 2_3:-51230629 Msa0297570:CDS
CTACCCCAACAATCCGTGAA+TGG 0.529060 2_3:-51234176 Msa0297570:five_prime_UTR
AAGCTCATGGTTGTGTTGAT+CGG 0.533255 2_3:+51230725 None:intergenic
TTGGTGAGTTTCGGCGCAAG+TGG 0.533626 2_3:-51229987 Msa0297570:CDS
TATTCTTCGCATGGACCTGA+AGG 0.535724 2_3:-51231051 Msa0297570:CDS
TTGGGTTGCATGACAACAAG+TGG 0.536611 2_3:-51229945 Msa0297570:CDS
GCAGATGAACGACATGTTGA+AGG 0.538363 2_3:-51230640 Msa0297570:CDS
GGACTAGAAGGCTTGTCAGA+TGG 0.538439 2_3:-51231176 Msa0297570:CDS
CAGGAGGGTATGAAAAGATA+GGG 0.541529 2_3:-51230572 Msa0297570:CDS
ACTGGTATGCTAGAATGAAT+GGG 0.542467 2_3:-51230962 Msa0297570:CDS
CTGAATGTAACCCCTCAACC+CGG 0.542990 2_3:+51229839 None:intergenic
GATGCCGGTAGTGTTGAGGC+TGG 0.544026 2_3:-51231116 Msa0297570:CDS
TCAGAAGATGGAAACAAAGA+GGG 0.545568 2_3:-51229185 Msa0297570:CDS
AATGCTCTACAATATCTTCG+TGG 0.547074 2_3:-51230483 Msa0297570:CDS
AACGCCAGAAAACACCACTA+AGG 0.547338 2_3:+51230296 None:intergenic
CGCCACACCGTTGATGGAGA+AGG 0.547855 2_3:-51230429 Msa0297570:CDS
TGCCGGTAGTGTTGAGGCTG+GGG 0.549068 2_3:-51231114 Msa0297570:CDS
TGATGGTTTGAGTCTAAGAG+TGG 0.549070 2_3:+51234352 None:intergenic
TGCTGCTGATATTCAGAAGA+TGG 0.549307 2_3:-51229197 Msa0297570:CDS
CCTATATCTGTCATTACTGA+TGG 0.550426 2_3:-51230162 Msa0297570:CDS
ATGCTCTACAATATCTTCGT+GGG 0.552217 2_3:-51230482 Msa0297570:CDS
ACAAAGAGGGGTTTACATGA+TGG 0.555956 2_3:-51229172 Msa0297570:CDS
CCCTTTCAGTCAAAATCAGA+AGG 0.557367 2_3:-51234248 Msa0297570:five_prime_UTR
TTTCAATGATCATATGGAGC+AGG 0.557911 2_3:-51229221 Msa0297570:CDS
TTCCCCAGCCTCAACACTAC+CGG 0.558077 2_3:+51231112 None:intergenic
ATATGTGTAGGCAATAGAAA+AGG 0.560818 2_3:-51231442 Msa0297570:intron
TCAAATTTCCTTGTCTCATG+GGG 0.562298 2_3:+51231020 None:intergenic
GAATTCCTGAATTTGTGGGT+CGG 0.563808 2_3:-51230041 Msa0297570:CDS
TCTACAATATCTTCGTGGGC+TGG 0.564296 2_3:-51230478 Msa0297570:CDS
AGTGCAATAATATGCTCGCA+TGG 0.564516 2_3:+51229439 None:intergenic
ATGCCGGTAGTGTTGAGGCT+GGG 0.568159 2_3:-51231115 Msa0297570:CDS
CGAAGACTCTGGTGGCACCT+AGG 0.569038 2_3:-51229387 Msa0297570:CDS
GTGTGACGGTATTAGCCAGT+TGG 0.570082 2_3:-51230385 Msa0297570:CDS
GGATGAATCTGTTGCATCTG+TGG 0.570836 2_3:-51231331 Msa0297570:CDS
ACTCTTCACCTAAAAGCTCA+TGG 0.573630 2_3:+51230712 None:intergenic
CAATGTTTATGGTGATGTGT+TGG 0.573702 2_3:-51230358 Msa0297570:CDS
AAAGTGACCATGAGATATTG+AGG 0.575026 2_3:-51229129 Msa0297570:CDS
CAAGGAGGATATTCTTCGCA+TGG 0.577671 2_3:-51231060 Msa0297570:CDS
AAGTGACCATGAGATATTGA+GGG 0.577878 2_3:-51229128 Msa0297570:CDS
CAATAATATGCTCGCATGGG+AGG 0.579108 2_3:+51229443 None:intergenic
ACCAAGCATCTAAACGGGAG+TGG 0.580235 2_3:-51229531 Msa0297570:CDS
AGCAAATTAGCAAGTGAGAG+TGG 0.583973 2_3:-51229250 Msa0297570:CDS
TTCAGAAGATGGAAACAAAG+AGG 0.584534 2_3:-51229186 Msa0297570:CDS
AGAAATAGCAACTAGAGAAG+AGG 0.585131 2_3:-51228414 Msa0297570:three_prime_UTR
GACATGTTGAAGGTTGGGAT+AGG 0.585269 2_3:-51230630 Msa0297570:CDS
TTTCGGTTGTTAGGTTGATG+AGG 0.585705 2_3:-51228518 Msa0297570:intron
TATTTCGTGATATTCTTGCA+CGG 0.585796 2_3:-51229621 Msa0297570:CDS
TGCAGAATTGCCGAAGACTC+TGG 0.586703 2_3:-51229398 Msa0297570:CDS
GGTAGTGTTGAGGCTGGGGA+AGG 0.589625 2_3:-51231110 Msa0297570:CDS
TTCGCATTCTTTGTCCACCT+AGG 0.592170 2_3:+51229370 None:intergenic
ACAAACAAGATTTCAAAGCA+TGG 0.592389 2_3:-51229686 Msa0297570:CDS
AAAAGAAGAAACTTATGTGT+GGG 0.592719 2_3:-51230223 Msa0297570:CDS
ACGCCAGAAAACACCACTAA+GGG 0.595174 2_3:+51230297 None:intergenic
TAGATATGTTCTCACAACGT+TGG 0.595477 2_3:-51230764 Msa0297570:CDS
CAGGATCCCTCAATATCTCA+TGG 0.595823 2_3:+51229122 None:intergenic
TGGGTTCAGAACTACCTCCC+GGG 0.596128 2_3:-51229857 Msa0297570:CDS
GTCACTTTGACTTGAATCAG+TGG 0.596570 2_3:+51229144 None:intergenic
TGCGGCGTGAAGTGAAGTGA+GGG 0.599509 2_3:+51234129 None:intergenic
GAGACTGTTGACGATGATGC+CGG 0.599698 2_3:-51231131 Msa0297570:CDS
CCTTTGTCTGCCATAGACAA+GGG 0.606480 2_3:-51230881 Msa0297570:CDS
AAGTCTACCTTCTCCATCAA+CGG 0.606864 2_3:+51230422 None:intergenic
GATGATTAAAAGCAATAAAG+GGG 0.606914 2_3:-51230919 Msa0297570:CDS
GTGCAATAATATGCTCGCAT+GGG 0.609249 2_3:+51229440 None:intergenic
GGCATGCATGTGTGTCAACA+TGG 0.612865 2_3:-51228497 Msa0297570:CDS
CCCTTGTCTATGGCAGACAA+AGG 0.613763 2_3:+51230881 None:intergenic
GAACTACCTCCCGGGTTGAG+GGG 0.614332 2_3:-51229849 Msa0297570:CDS
GATCAAGTCCCCATGAGACA+AGG 0.614765 2_3:-51231028 Msa0297570:CDS
AATTACATATATTGATAACA+AGG 0.616446 2_3:-51231078 Msa0297570:CDS
GCTAAGAATCTGTGGCGGAA+AGG 0.616612 2_3:-51234101 Msa0297570:five_prime_UTR
CGATGATGCCGGTAGTGTTG+AGG 0.625130 2_3:-51231120 Msa0297570:CDS
ACAGATTCTTAGCACAATTG+CGG 0.625719 2_3:+51234111 None:intergenic
AAACCATTCACGGATTGTTG+GGG 0.626769 2_3:+51234173 None:intergenic
TGAATGTAACCCCTCAACCC+GGG 0.629395 2_3:+51229840 None:intergenic
TCTTTGGCAAACCAATCAGG+AGG 0.631246 2_3:-51230588 Msa0297570:CDS
TTGCGGCGTGAAGTGAAGTG+AGG 0.632728 2_3:+51234128 None:intergenic
TGGGTTGCATGACAACAAGT+GGG 0.633652 2_3:-51229944 Msa0297570:CDS
TGTTGAAGAGAATATGCAGA+TGG 0.634807 2_3:-51231352 Msa0297570:CDS
GTGAGTGTAAACCCGAGACT+CGG 0.636551 2_3:-51230818 Msa0297570:CDS
AGGGGTTACATTCAGAAATG+GGG 0.639622 2_3:-51229831 Msa0297570:CDS
TTGTTGTGATGATCTTCATG+TGG 0.640203 2_3:+51228950 None:intergenic
GCAATTGTGCTAAGAATCTG+TGG 0.642795 2_3:-51234109 Msa0297570:five_prime_UTR
ATTCTTCGCATGGACCTGAA+GGG 0.645936 2_3:-51231050 Msa0297570:CDS
CAGAAGATGGAAACAAAGAG+GGG 0.647832 2_3:-51229184 Msa0297570:CDS
CGCAACGCAGCATCTAACGT+TGG 0.649284 2_3:-51230063 Msa0297570:CDS
AGACTCTGGTGGCACCTAGG+TGG 0.651025 2_3:-51229384 Msa0297570:CDS
GTATGCAAAGAGAAAGATGT+GGG 0.653690 2_3:-51229911 Msa0297570:CDS
ACTAGAAGGCTTGTCAGATG+GGG 0.659814 2_3:-51231174 Msa0297570:CDS
TACCTTCTCCATCAACGGTG+TGG 0.664097 2_3:+51230427 None:intergenic
TAATTACATGCGTTTCAAGG+AGG 0.673295 2_3:-51229749 Msa0297570:CDS
AAGAGGGGTTTACATGATGG+CGG 0.673541 2_3:-51229169 Msa0297570:CDS
CTTTGGCAAACCAATCAGGA+GGG 0.675668 2_3:-51230587 Msa0297570:CDS
TGGGCCACAGCACACATACG+CGG 0.678201 2_3:-51229892 Msa0297570:CDS
AAAGAACTATAGAATCGAGA+CGG 0.680829 2_3:+51230606 None:intergenic
TGAATCTGTTGCATCTGTGG+AGG 0.686563 2_3:-51231328 Msa0297570:intron
AGAATTGCCGAAGACTCTGG+TGG 0.695739 2_3:-51229395 Msa0297570:CDS
CCATAGACAAGGGTTTAGGG+AGG 0.704078 2_3:-51230871 Msa0297570:CDS
TACATATATTGATAACAAGG+AGG 0.707799 2_3:-51231075 Msa0297570:CDS
TAGGTGGACAAAGAATGCGA+AGG 0.720693 2_3:-51229368 Msa0297570:CDS
TGTATGCAAAGAGAAAGATG+TGG 0.731423 2_3:-51229912 Msa0297570:CDS
TGTAAACCCGAGACTCGGTG+TGG 0.731893 2_3:-51230813 Msa0297570:CDS
ATGTAACCCCTCAACCCGGG+AGG 0.732309 2_3:+51229843 None:intergenic
ATTGTGCTAAGAATCTGTGG+CGG 0.736573 2_3:-51234106 Msa0297570:five_prime_UTR
ATTGCCGCGTATGTGTGCTG+TGG 0.739517 2_3:+51229888 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAAATACAATAATAT+TGG + chr2_3:51231319-51231338 None:intergenic 10.0%
!!! ATATTATTGTATTTTGTTTT+TGG - chr2_3:51231319-51231338 Msa0297570:intron 10.0%
!!! GAAGAAATTAGTTTATTTTA+GGG + chr2_3:51228247-51228266 None:intergenic 15.0%
!!! AGAAGAAATTAGTTTATTTT+AGG + chr2_3:51228248-51228267 None:intergenic 15.0%
!!! ATCTAAAACAATAAATTACA+AGG + chr2_3:51228650-51228669 None:intergenic 15.0%
!! ATTTCATATTTAAAGAAAGT+TGG - chr2_3:51229066-51229085 Msa0297570:CDS 15.0%
!! TAATAAAATTCATTTCTGTT+AGG - chr2_3:51229742-51229761 Msa0297570:CDS 15.0%
!!! TAATTTTATTAAGCAAAACT+TGG - chr2_3:51230341-51230360 Msa0297570:CDS 15.0%
!!! ATGCTATTTGAAAAAAAATA+AGG - chr2_3:51230991-51231010 Msa0297570:CDS 15.0%
!! AAAAAAAATAAGGTTCATAT+AGG - chr2_3:51231001-51231020 Msa0297570:CDS 15.0%
!!! TTTTTGTTTTGAAAATAACA+TGG - chr2_3:51231077-51231096 Msa0297570:CDS 15.0%
!! AGAAGAAAATACAATAATAT+TGG + chr2_3:51231268-51231287 None:intergenic 15.0%
!!! ATATTATTGTATTTTCTTCT+TGG - chr2_3:51231268-51231287 Msa0297570:intron 15.0%
!! ATCAATATATGTAATTTCTT+CGG + chr2_3:51231468-51231487 None:intergenic 15.0%
!!! AATTACATATATTGATAACA+AGG - chr2_3:51231472-51231491 Msa0297570:intron 15.0%
!! TAAAAGATAATTATAACGAT+GGG + chr2_3:51233694-51233713 None:intergenic 15.0%
!! TTAAAAGATAATTATAACGA+TGG + chr2_3:51233695-51233714 None:intergenic 15.0%
!!! TTGTTTTTCAAAGAAAATTA+AGG + chr2_3:51233887-51233906 None:intergenic 15.0%
!!! TATTTATGTTTCTTTTGTTT+CGG - chr2_3:51234015-51234034 Msa0297570:intron 15.0%
!!! ACTTGATTTTCTAATTTTGA+TGG + chr2_3:51228218-51228237 None:intergenic 20.0%
!! TCATAAAATTAAACCATTCA+CGG + chr2_3:51228390-51228409 None:intergenic 20.0%
!!! TTTTTCCTTATCTTCAAATA+TGG - chr2_3:51228522-51228541 Msa0297570:intron 20.0%
!!! TTCAAATATGGTTTTGAATT+TGG - chr2_3:51228534-51228553 Msa0297570:intron 20.0%
!!! AATTTGGTTTTATAATGTGA+GGG - chr2_3:51228550-51228569 Msa0297570:intron 20.0%
!! CAGAAATTAAAACTAGAAAT+GGG + chr2_3:51228608-51228627 None:intergenic 20.0%
!! TCAGAAATTAAAACTAGAAA+TGG + chr2_3:51228609-51228628 None:intergenic 20.0%
!! AAAACTCTAACAAATTTCAA+AGG + chr2_3:51228693-51228712 None:intergenic 20.0%
!!! AATTTATTTTCTCATGAACT+AGG - chr2_3:51228899-51228918 Msa0297570:intron 20.0%
!! TCACTTTCACAATTTATTAA+TGG + chr2_3:51229378-51229397 None:intergenic 20.0%
!!! TTGTTGTTACATATATATCT+CGG - chr2_3:51229511-51229530 Msa0297570:CDS 20.0%
!! TTTGTAACTTATCTCAATTT+AGG + chr2_3:51229920-51229939 None:intergenic 20.0%
!! AATTGAGATAAGTTACAAAT+AGG - chr2_3:51229921-51229940 Msa0297570:CDS 20.0%
!! TAGACAAAGAAAAATATGAT+TGG + chr2_3:51230080-51230099 None:intergenic 20.0%
!! TGCGTTTAATAATAAATCTA+TGG + chr2_3:51230866-51230885 None:intergenic 20.0%
!! AAGATGATTAAAAGCAATAA+AGG - chr2_3:51231629-51231648 Msa0297570:intron 20.0%
!! AGATGATTAAAAGCAATAAA+GGG - chr2_3:51231630-51231649 Msa0297570:intron 20.0%
!! AAGGATATATATAATCAGAT+AGG - chr2_3:51232010-51232029 Msa0297570:intron 20.0%
!! CAAATATAACGTTATGATTA+TGG + chr2_3:51232285-51232304 None:intergenic 20.0%
!! AATGAAGAATGCTATTAAAA+AGG - chr2_3:51232420-51232439 Msa0297570:intron 20.0%
!! CAATTCACGTAAAAAATTTA+TGG + chr2_3:51234312-51234331 None:intergenic 20.0%
! CAAAACCATATTTGAAGATA+AGG + chr2_3:51228530-51228549 None:intergenic 25.0%
!!! GAATTTGGTTTTATAATGTG+AGG - chr2_3:51228549-51228568 Msa0297570:intron 25.0%
! TAAAACTAGAAATGGGTAAA+AGG + chr2_3:51228601-51228620 None:intergenic 25.0%
! GATTTAATAGACATTAGAGA+TGG + chr2_3:51228781-51228800 None:intergenic 25.0%
! TCATATTTAAAGAAAGTTGG+AGG - chr2_3:51229069-51229088 Msa0297570:CDS 25.0%
!! TATATGGACATGATTTTTGT+GGG - chr2_3:51229213-51229232 Msa0297570:CDS 25.0%
!!! GTCCTTTATTTTTTTCTTTC+TGG - chr2_3:51229644-51229663 Msa0297570:CDS 25.0%
! CACCAGAAAGAAAAAAATAA+AGG + chr2_3:51229649-51229668 None:intergenic 25.0%
! TATCTTTCTCTATGTTAACA+GGG - chr2_3:51229669-51229688 Msa0297570:CDS 25.0%
!!! CTTATTTTCACCTATATTTC+TGG + chr2_3:51229786-51229805 None:intergenic 25.0%
! GGTGAAAATAAGAAGTTATA+TGG - chr2_3:51229794-51229813 Msa0297570:CDS 25.0%
!! ATATTCATGCAACAAAGTTT+TGG + chr2_3:51230029-51230048 None:intergenic 25.0%
! GTAAAATGATGTGAGTATAA+TGG + chr2_3:51230171-51230190 None:intergenic 25.0%
! TGTTCAATAGTACTTATCTT+TGG + chr2_3:51230199-51230218 None:intergenic 25.0%
!!! TTTTTTCCTCATTGTTATCA+AGG + chr2_3:51230425-51230444 None:intergenic 25.0%
!! AATTATAGTGGAGGAAATAA+AGG + chr2_3:51230808-51230827 None:intergenic 25.0%
! AATAATAGGATCTTCAACAA+TGG + chr2_3:51230834-51230853 None:intergenic 25.0%
!!! CAAATGAAAGCATTTTGTTT+AGG + chr2_3:51230912-51230931 None:intergenic 25.0%
! AAACAAAATGCTTTCATTTG+TGG - chr2_3:51230912-51230931 Msa0297570:CDS 25.0%
! ATAGAAACTGTATGTATATG+AGG - chr2_3:51230945-51230964 Msa0297570:CDS 25.0%
! ATAGGATTAACTTATGACAA+TGG - chr2_3:51231019-51231038 Msa0297570:CDS 25.0%
! TTGTTTGAACATATTTGAGA+TGG - chr2_3:51231168-51231187 Msa0297570:CDS 25.0%
!! TACATATATTGATAACAAGG+AGG - chr2_3:51231475-51231494 Msa0297570:intron 25.0%
!!! GAAATTTGAGTTTTCAAGTT+TGG - chr2_3:51231544-51231563 Msa0297570:intron 25.0%
! GATGATTAAAAGCAATAAAG+GGG - chr2_3:51231631-51231650 Msa0297570:intron 25.0%
! AATCATAACGTTATATTTGC+TGG - chr2_3:51232286-51232305 Msa0297570:intron 25.0%
! AAAAAGAAGAAACTTATGTG+TGG - chr2_3:51232326-51232345 Msa0297570:intron 25.0%
! AAAAGAAGAAACTTATGTGT+GGG - chr2_3:51232327-51232346 Msa0297570:intron 25.0%
!!! TATTGCACTATTGGTTTTTT+TGG - chr2_3:51233125-51233144 Msa0297570:intron 25.0%
!! TTATGTGAATCCCAATATTT+TGG + chr2_3:51233237-51233256 None:intergenic 25.0%
! TGATGATTTCAATGATCATA+TGG - chr2_3:51233323-51233342 Msa0297570:intron 25.0%
! ATGCCTATACTTTGATATAT+AGG - chr2_3:51233845-51233864 Msa0297570:intron 25.0%
! TGCCTATACTTTGATATATA+GGG - chr2_3:51233846-51233865 Msa0297570:intron 25.0%
TAAGGAAAAAGTAATCTCAC+CGG + chr2_3:51228512-51228531 None:intergenic 30.0%
!!! GTTTTAATTTCTGACCATGT+TGG - chr2_3:51228615-51228634 Msa0297570:intron 30.0%
AAGGCAAAAATGAACACAAA+AGG + chr2_3:51228674-51228693 None:intergenic 30.0%
!!! ATGGACAAATTTTTTTCCCA+AGG - chr2_3:51228840-51228859 Msa0297570:intron 30.0%
ACTATGTATTGCATCTTACA+TGG + chr2_3:51228997-51229016 None:intergenic 30.0%
!!! TTTTGGTTTTAGTTCAGCAA+TGG - chr2_3:51229037-51229056 Msa0297570:CDS 30.0%
!!! TTTTAGTTCAGCAATGGAAA+GGG - chr2_3:51229043-51229062 Msa0297570:CDS 30.0%
ATAGTCAATTCATCTCGTAA+AGG + chr2_3:51229102-51229121 None:intergenic 30.0%
! CTATATGGACATGATTTTTG+TGG - chr2_3:51229212-51229231 Msa0297570:CDS 30.0%
! ACAACTTCAATTTGAAGTGT+TGG - chr2_3:51229457-51229476 Msa0297570:CDS 30.0%
GTATCTTTCTCTATGTTAAC+AGG - chr2_3:51229668-51229687 Msa0297570:CDS 30.0%
TGCATAAGTAACTTTCTGTT+GGG - chr2_3:51229950-51229969 Msa0297570:CDS 30.0%
TTAAATTCAAACTCTTGCAC+TGG - chr2_3:51230125-51230144 Msa0297570:CDS 30.0%
TTTGCAAGAAAAAGAACAAG+AGG - chr2_3:51230381-51230400 Msa0297570:CDS 30.0%
! AGAAAACCTTGATAACAATG+AGG - chr2_3:51230416-51230435 Msa0297570:CDS 30.0%
AGGAAAAAAGACAGTAAACT+AGG - chr2_3:51230436-51230455 Msa0297570:CDS 30.0%
CAACAATGGTGAAATTATAG+TGG + chr2_3:51230820-51230839 None:intergenic 30.0%
TATGGAAAGCGAGAAATAAT+AGG + chr2_3:51230848-51230867 None:intergenic 30.0%
!!! ATGAAAGCATTTTGTTTAGG+TGG + chr2_3:51230909-51230928 None:intergenic 30.0%
TCTATTGCCTACACATATTA+TGG + chr2_3:51231106-51231125 None:intergenic 30.0%
ATATGTGTAGGCAATAGAAA+AGG - chr2_3:51231108-51231127 Msa0297570:CDS 30.0%
!!! TTTTGAAGCTTTGTTTGTTG+TGG - chr2_3:51231348-51231367 Msa0297570:CDS 30.0%
!!! TGAGTTTTCAAGTTTGGATA+TGG - chr2_3:51231550-51231569 Msa0297570:intron 30.0%
! TTTTAATCATCTTGCTCTTG+CGG + chr2_3:51231622-51231641 None:intergenic 30.0%
ACATCGAAAAATGAAAGAGT+CGG - chr2_3:51231880-51231899 Msa0297570:intron 30.0%
AAAGAACTATAGAATCGAGA+CGG + chr2_3:51231947-51231966 None:intergenic 30.0%
CATAAACATTGTATTCCAAC+TGG + chr2_3:51232183-51232202 None:intergenic 30.0%
CAGTTGGAATACAATGTTTA+TGG - chr2_3:51232181-51232200 Msa0297570:intron 30.0%
CACAATCTATGATAAGCATT+TGG + chr2_3:51232451-51232470 None:intergenic 30.0%
ATTATGATCTTGGTGAGTTT+CGG - chr2_3:51232554-51232573 Msa0297570:intron 30.0%
! ACTGAAATGGTTGATACATT+TGG - chr2_3:51232586-51232605 Msa0297570:intron 30.0%
! CTGAAATGGTTGATACATTT+GGG - chr2_3:51232587-51232606 Msa0297570:intron 30.0%
!! GCTGACTTTTCTTCTAATTA+CGG - chr2_3:51232829-51232848 Msa0297570:intron 30.0%
! TGAAATCTTGTTTGTAGTAC+CGG + chr2_3:51232859-51232878 None:intergenic 30.0%
ACAAACAAGATTTCAAAGCA+TGG - chr2_3:51232864-51232883 Msa0297570:intron 30.0%
TATTTCGTGATATTCTTGCA+CGG - chr2_3:51232929-51232948 Msa0297570:intron 30.0%
ATAAGCCTCTTCCAAAATAT+TGG - chr2_3:51233223-51233242 Msa0297570:intron 30.0%
TAAGCCTCTTCCAAAATATT+GGG - chr2_3:51233224-51233243 Msa0297570:intron 30.0%
TGTTCTACTTGTAGAGAATT+CGG - chr2_3:51233522-51233541 Msa0297570:intron 30.0%
GACCCTATATATCAAAGTAT+AGG + chr2_3:51233851-51233870 None:intergenic 30.0%
!! TTTCTTTTGTTTCGGTTGTT+AGG - chr2_3:51234023-51234042 Msa0297570:intron 30.0%
TCAACAAATTCTCTGATGAT+TGG + chr2_3:51234093-51234112 None:intergenic 30.0%
!! TCATCAGAGAATTTGTTGAA+TGG - chr2_3:51234094-51234113 Msa0297570:five_prime_UTR 30.0%
TTACCTATTATGTTGAGCTT+TGG - chr2_3:51234260-51234279 Msa0297570:five_prime_UTR 30.0%
TACGTGAATTGTTGCTAAAT+AGG - chr2_3:51234321-51234340 Msa0297570:five_prime_UTR 30.0%
TCTTTATGCTTGTCATCTAA+AGG - chr2_3:51234347-51234366 Msa0297570:five_prime_UTR 30.0%
TATTCGTGTTGAACAAAGTT+CGG + chr2_3:51234394-51234413 None:intergenic 30.0%
!! CTAAGAGTGGTAACTGATTT+TGG + chr2_3:51228188-51228207 None:intergenic 35.0%
!!! TTCTGATTTTGACTGAAAGG+GGG + chr2_3:51228303-51228322 None:intergenic 35.0%
!!! CTTCTGATTTTGACTGAAAG+GGG + chr2_3:51228304-51228323 None:intergenic 35.0%
!!! CCTTCTGATTTTGACTGAAA+GGG + chr2_3:51228305-51228324 None:intergenic 35.0%
!!! ACCTTCTGATTTTGACTGAA+AGG + chr2_3:51228306-51228325 None:intergenic 35.0%
! TAAACCATTCACGGATTGTT+GGG + chr2_3:51228381-51228400 None:intergenic 35.0%
! TTAAACCATTCACGGATTGT+TGG + chr2_3:51228382-51228401 None:intergenic 35.0%
ACAGATTCTTAGCACAATTG+CGG + chr2_3:51228442-51228461 None:intergenic 35.0%
!! GTTCCATTTTTCTTTCTCGT+TGG - chr2_3:51228483-51228502 Msa0297570:CDS 35.0%
!!! TTTCTGACCATGTTGGTTTT+TGG - chr2_3:51228622-51228641 Msa0297570:intron 35.0%
TTTGCTTCAGACCTTTACAT+TGG - chr2_3:51228711-51228730 Msa0297570:intron 35.0%
TCAGACCTTTACATTGGATT+AGG - chr2_3:51228717-51228736 Msa0297570:intron 35.0%
ACGAACCTAATCCAATGTAA+AGG + chr2_3:51228725-51228744 None:intergenic 35.0%
ACAAACATGAGTTGTAGTCA+TGG + chr2_3:51228867-51228886 None:intergenic 35.0%
! CATAGTGTTGTTGTTACTTG+TGG - chr2_3:51229011-51229030 Msa0297570:CDS 35.0%
!!! GTTTTAGTTCAGCAATGGAA+AGG - chr2_3:51229042-51229061 Msa0297570:CDS 35.0%
! ATGATTTTTGTGGGACTTCA+AGG - chr2_3:51229222-51229241 Msa0297570:CDS 35.0%
! TGATTTTTGTGGGACTTCAA+GGG - chr2_3:51229223-51229242 Msa0297570:CDS 35.0%
AAATACCATCCACAAACCAT+TGG + chr2_3:51229288-51229307 None:intergenic 35.0%
!!! GTGTTCCTTTAGCTTTTTAG+AGG - chr2_3:51229588-51229607 Msa0297570:CDS 35.0%
! CAACACCTCTAAAAAGCTAA+AGG + chr2_3:51229596-51229615 None:intergenic 35.0%
!!! CTTTAGCTTTTTAGAGGTGT+TGG - chr2_3:51229594-51229613 Msa0297570:CDS 35.0%
CACTAAAGAGCCAGAAATAT+AGG - chr2_3:51229773-51229792 Msa0297570:CDS 35.0%
ACAAAGTGCATTGTGATGTA+TGG + chr2_3:51229837-51229856 None:intergenic 35.0%
GTGCATAAGTAACTTTCTGT+TGG - chr2_3:51229949-51229968 Msa0297570:CDS 35.0%
! GTTCTTTTTCTTGCAAACTG+TGG + chr2_3:51230378-51230397 None:intergenic 35.0%
!! TAAGAGTGTGGAGTTCTTTT+GGG + chr2_3:51230469-51230488 None:intergenic 35.0%
!! TTAAGAGTGTGGAGTTCTTT+TGG + chr2_3:51230470-51230489 None:intergenic 35.0%
!! GTGTTATTTATGTCTGTGTG+TGG + chr2_3:51230512-51230531 None:intergenic 35.0%
!!! CTTAGATTTTGGTGCTATCT+AGG + chr2_3:51230552-51230571 None:intergenic 35.0%
TCACCGCATAAAACATCTAA+CGG - chr2_3:51230588-51230607 Msa0297570:CDS 35.0%
!!! TGTTTTTTAGGTGCTGTTTG+GGG + chr2_3:51230665-51230684 None:intergenic 35.0%
!!! GTGTTTTTTAGGTGCTGTTT+GGG + chr2_3:51230666-51230685 None:intergenic 35.0%
!!! TGTGTTTTTTAGGTGCTGTT+TGG + chr2_3:51230667-51230686 None:intergenic 35.0%
!!! TGCTTTTGGTGTTAAAAAGG+TGG + chr2_3:51230705-51230724 None:intergenic 35.0%
!!! GACTGCTTTTGGTGTTAAAA+AGG + chr2_3:51230708-51230727 None:intergenic 35.0%
AAATAAAGGTCGTATCTTGG+CGG + chr2_3:51230794-51230813 None:intergenic 35.0%
AGGAAATAAAGGTCGTATCT+TGG + chr2_3:51230797-51230816 None:intergenic 35.0%
CAATGGTGAAATTATAGTGG+AGG + chr2_3:51230817-51230836 None:intergenic 35.0%
AAATGCTTTCATTTGTGGAG+TGG - chr2_3:51230917-51230936 Msa0297570:CDS 35.0%
AATGCTTTCATTTGTGGAGT+GGG - chr2_3:51230918-51230937 Msa0297570:CDS 35.0%
ATGGATGCCATAATATGTGT+AGG - chr2_3:51231096-51231115 Msa0297570:CDS 35.0%
TGTTGAAGAGAATATGCAGA+TGG - chr2_3:51231198-51231217 Msa0297570:intron 35.0%
TCAAATTTCCTTGTCTCATG+GGG + chr2_3:51231533-51231552 None:intergenic 35.0%
CTCAAATTTCCTTGTCTCAT+GGG + chr2_3:51231534-51231553 None:intergenic 35.0%
ACTCAAATTTCCTTGTCTCA+TGG + chr2_3:51231535-51231554 None:intergenic 35.0%
TGGCTTATGAGTTCTATAAC+TGG - chr2_3:51231570-51231589 Msa0297570:intron 35.0%
AACTGGTATGCTAGAATGAA+TGG - chr2_3:51231587-51231606 Msa0297570:intron 35.0%
ACTGGTATGCTAGAATGAAT+GGG - chr2_3:51231588-51231607 Msa0297570:intron 35.0%
GTGGATGTGAAGCAAAATTT+CGG - chr2_3:51231756-51231775 Msa0297570:intron 35.0%
TGGATGTGAAGCAAAATTTC+GGG - chr2_3:51231757-51231776 Msa0297570:intron 35.0%
TAGATATGTTCTCACAACGT+TGG - chr2_3:51231786-51231805 Msa0297570:intron 35.0%
!! CTTTTAGGTGAAGAGTACAA+TGG - chr2_3:51231845-51231864 Msa0297570:intron 35.0%
GTCTCGATTCTATAGTTCTT+TGG - chr2_3:51231946-51231965 Msa0297570:intron 35.0%
AAAGATAGGGTTTCGAAAGA+AGG - chr2_3:51231991-51232010 Msa0297570:intron 35.0%
!! GAAAGCAACGCCTTTTAAAA+CGG - chr2_3:51232032-51232051 Msa0297570:intron 35.0%
!! TACCATCACACCGTTTTAAA+AGG + chr2_3:51232045-51232064 None:intergenic 35.0%
AATGCTCTACAATATCTTCG+TGG - chr2_3:51232067-51232086 Msa0297570:intron 35.0%
ATGCTCTACAATATCTTCGT+GGG - chr2_3:51232068-51232087 Msa0297570:intron 35.0%
! CAATGTTTATGGTGATGTGT+TGG - chr2_3:51232192-51232211 Msa0297570:intron 35.0%
TTGGCATTTGATGCAACATA+TGG - chr2_3:51232211-51232230 Msa0297570:intron 35.0%
CAAATATCATTGTCCCTTAG+TGG - chr2_3:51232240-51232259 Msa0297570:intron 35.0%
! GTGGGTTCTTGAACAATTTT+TGG - chr2_3:51232345-51232364 Msa0297570:intron 35.0%
!! CAATTTTTGGAAGCAATGTC+TGG - chr2_3:51232358-51232377 Msa0297570:intron 35.0%
CCATCAGTAATGACAGATAT+AGG + chr2_3:51232391-51232410 None:intergenic 35.0%
CCTATATCTGTCATTACTGA+TGG - chr2_3:51232388-51232407 Msa0297570:intron 35.0%
CTTATCATAGATTGTGTGCT+TGG - chr2_3:51232455-51232474 Msa0297570:intron 35.0%
GTTGGAATTCCTGAATTTGT+GGG - chr2_3:51232505-51232524 Msa0297570:intron 35.0%
ATGTTGGGTGATTATGATCT+TGG - chr2_3:51232544-51232563 Msa0297570:intron 35.0%
TGTATGCAAAGAGAAAGATG+TGG - chr2_3:51232638-51232657 Msa0297570:intron 35.0%
GTATGCAAAGAGAAAGATGT+GGG - chr2_3:51232639-51232658 Msa0297570:intron 35.0%
CCTTGAAACGCATGTAATTA+AGG + chr2_3:51232801-51232820 None:intergenic 35.0%
CCTTAATTACATGCGTTTCA+AGG - chr2_3:51232798-51232817 Msa0297570:intron 35.0%
TAATTACATGCGTTTCAAGG+AGG - chr2_3:51232801-51232820 Msa0297570:intron 35.0%
TTCTTCTAATTACGGTGATC+CGG - chr2_3:51232837-51232856 Msa0297570:intron 35.0%
GTAAGTACCAAGCATCTAAA+CGG - chr2_3:51233013-51233032 Msa0297570:intron 35.0%
TAAGTACCAAGCATCTAAAC+GGG - chr2_3:51233014-51233033 Msa0297570:intron 35.0%
CGAGCATATTATTGCACTAT+TGG - chr2_3:51233116-51233135 Msa0297570:intron 35.0%
!! GAATCCCAATATTTTGGAAG+AGG + chr2_3:51233231-51233250 None:intergenic 35.0%
TTTCAATGATCATATGGAGC+AGG - chr2_3:51233329-51233348 Msa0297570:intron 35.0%
TTCAGAAGATGGAAACAAAG+AGG - chr2_3:51233364-51233383 Msa0297570:intron 35.0%
TCAGAAGATGGAAACAAAGA+GGG - chr2_3:51233365-51233384 Msa0297570:intron 35.0%
AAAGTGACCATGAGATATTG+AGG - chr2_3:51233421-51233440 Msa0297570:intron 35.0%
AAGTGACCATGAGATATTGA+GGG - chr2_3:51233422-51233441 Msa0297570:intron 35.0%
TTGTTGTGATGATCTTCATG+TGG + chr2_3:51233603-51233622 None:intergenic 35.0%
! AACTGCAATTTTACCTCACA+AGG + chr2_3:51233790-51233809 None:intergenic 35.0%
ACATAGCAATTTGTAGCATC+AGG - chr2_3:51233931-51233950 Msa0297570:intron 35.0%
AGAGAATCACTTTGAATTGC+AGG + chr2_3:51233992-51234011 None:intergenic 35.0%
AGAAATAGCAACTAGAGAAG+AGG - chr2_3:51234136-51234155 Msa0297570:five_prime_UTR 35.0%
AGTCCAAAGCTCAACATAAT+AGG + chr2_3:51234266-51234285 None:intergenic 35.0%
GGAGAGGAAACTGATTATTG+AGG + chr2_3:51228167-51228186 None:intergenic 40.0%
!! AGTGGTAACTGATTTTGGAG+AGG + chr2_3:51228183-51228202 None:intergenic 40.0%
TGATGGTTTGAGTCTAAGAG+TGG + chr2_3:51228201-51228220 None:intergenic 40.0%
CCCTTTCAGTCAAAATCAGA+AGG - chr2_3:51228302-51228321 Msa0297570:three_prime_UTR 40.0%
! AAACCATTCACGGATTGTTG+GGG + chr2_3:51228380-51228399 None:intergenic 40.0%
GCAATTGTGCTAAGAATCTG+TGG - chr2_3:51228441-51228460 Msa0297570:CDS 40.0%
ATTGTGCTAAGAATCTGTGG+CGG - chr2_3:51228444-51228463 Msa0297570:CDS 40.0%
TGGCCAACGAGAAAGAAAAA+TGG + chr2_3:51228489-51228508 None:intergenic 40.0%
CAAGGAACCAAAAACCAACA+TGG + chr2_3:51228632-51228651 None:intergenic 40.0%
! CATTGGATTAGGTTCGTGAA+AGG - chr2_3:51228728-51228747 Msa0297570:intron 40.0%
!! CACTGTTCACGTTTGTTGTA+TGG - chr2_3:51228821-51228840 Msa0297570:intron 40.0%
!! GTTGTTACTTGTGGCTGTTT+TGG - chr2_3:51229020-51229039 Msa0297570:CDS 40.0%
ACACACACACACACACTATA+TGG - chr2_3:51229197-51229216 Msa0297570:CDS 40.0%
TTGATTGATTGAGCAGCCAA+TGG - chr2_3:51229269-51229288 Msa0297570:CDS 40.0%
TGTTAACAGGGTGAATGCAT+TGG - chr2_3:51229681-51229700 Msa0297570:CDS 40.0%
CTGAGATGAGTCTGTATATG+AGG + chr2_3:51229882-51229901 None:intergenic 40.0%
TTCTGTTGGGTCAAAGTTAG+AGG - chr2_3:51229963-51229982 Msa0297570:CDS 40.0%
AATATCACAGACTCGTTGCA+TGG - chr2_3:51230044-51230063 Msa0297570:CDS 40.0%
!! AAGAGTGTGGAGTTCTTTTG+GGG + chr2_3:51230468-51230487 None:intergenic 40.0%
!! GTGTTGGTAACTTAAGAGTG+TGG + chr2_3:51230481-51230500 None:intergenic 40.0%
!!! GATTTTGGTGCTATCTAGGT+GGG + chr2_3:51230548-51230567 None:intergenic 40.0%
!!! AGATTTTGGTGCTATCTAGG+TGG + chr2_3:51230549-51230568 None:intergenic 40.0%
! GGACTTAGAGGCTTAGATTT+TGG + chr2_3:51230563-51230582 None:intergenic 40.0%
! ATGTTTTATGCGGTGACAGT+AGG + chr2_3:51230584-51230603 None:intergenic 40.0%
! CTGCCGTTAGATGTTTTATG+CGG + chr2_3:51230594-51230613 None:intergenic 40.0%
TGTTTACATTTCAGGAGGTG+CGG + chr2_3:51230641-51230660 None:intergenic 40.0%
! TTTGGGGCTGTTTACATTTC+AGG + chr2_3:51230649-51230668 None:intergenic 40.0%
AGCACCTAAAAAACACAGAC+CGG - chr2_3:51230670-51230689 Msa0297570:CDS 40.0%
TAACACCAAAAGCAGTCCTT+CGG - chr2_3:51230711-51230730 Msa0297570:CDS 40.0%
GTTTGTTCTACGAATGGTGT+TGG + chr2_3:51230740-51230759 None:intergenic 40.0%
!! AAGCTTTGTTTGTTGTGGCA+GGG - chr2_3:51231353-51231372 Msa0297570:CDS 40.0%
! TGCTAGAATGAATGGGTTTG+CGG - chr2_3:51231595-51231614 Msa0297570:intron 40.0%
! AAGCTCATGGTTGTGTTGAT+CGG + chr2_3:51231828-51231847 None:intergenic 40.0%
! CAACACAACCATGAGCTTTT+AGG - chr2_3:51231830-51231849 Msa0297570:intron 40.0%
ACTCTTCACCTAAAAGCTCA+TGG + chr2_3:51231841-51231860 None:intergenic 40.0%
ATGAACGACATGTTGAAGGT+TGG - chr2_3:51231914-51231933 Msa0297570:intron 40.0%
TGAACGACATGTTGAAGGTT+GGG - chr2_3:51231915-51231934 Msa0297570:intron 40.0%
ACATGTTGAAGGTTGGGATA+GGG - chr2_3:51231921-51231940 Msa0297570:intron 40.0%
AGTTCTTTGGCAAACCAATC+AGG - chr2_3:51231959-51231978 Msa0297570:intron 40.0%
! TCTTTTCATACCCTCCTGAT+TGG + chr2_3:51231976-51231995 None:intergenic 40.0%
! TCAGGAGGGTATGAAAAGAT+AGG - chr2_3:51231977-51231996 Msa0297570:intron 40.0%
! CAGGAGGGTATGAAAAGATA+GGG - chr2_3:51231978-51231997 Msa0297570:intron 40.0%
! GTAGACTTGAACACCTGTTT+TGG - chr2_3:51232143-51232162 Msa0297570:intron 40.0%
TAATACCGTCACACCAAAAC+AGG + chr2_3:51232159-51232178 None:intergenic 40.0%
CGTTGGAATTCCTGAATTTG+TGG - chr2_3:51232504-51232523 Msa0297570:intron 40.0%
GAATTCCTGAATTTGTGGGT+CGG - chr2_3:51232509-51232528 Msa0297570:intron 40.0%
!!! ATACGCGGCAATTTTTTTGC+TGG - chr2_3:51232673-51232692 Msa0297570:intron 40.0%
!!! TACGCGGCAATTTTTTTGCT+GGG - chr2_3:51232674-51232693 Msa0297570:intron 40.0%
TGAGGGGTTACATTCAGAAA+TGG - chr2_3:51232717-51232736 Msa0297570:intron 40.0%
GAGGGGTTACATTCAGAAAT+GGG - chr2_3:51232718-51232737 Msa0297570:intron 40.0%
AGGGGTTACATTCAGAAATG+GGG - chr2_3:51232719-51232738 Msa0297570:intron 40.0%
CACTTGAACACATCATCATC+TGG + chr2_3:51233060-51233079 None:intergenic 40.0%
CAAGTGTTCTTGCAAGAAGA+TGG - chr2_3:51233074-51233093 Msa0297570:intron 40.0%
TGCAAGAAGATGGAGTCATT+TGG - chr2_3:51233084-51233103 Msa0297570:intron 40.0%
GTGCAATAATATGCTCGCAT+GGG + chr2_3:51233113-51233132 None:intergenic 40.0%
AGTGCAATAATATGCTCGCA+TGG + chr2_3:51233114-51233133 None:intergenic 40.0%
AGCAAATTAGCAAGTGAGAG+TGG - chr2_3:51233300-51233319 Msa0297570:intron 40.0%
TGCTGCTGATATTCAGAAGA+TGG - chr2_3:51233353-51233372 Msa0297570:intron 40.0%
CAGAAGATGGAAACAAAGAG+GGG - chr2_3:51233366-51233385 Msa0297570:intron 40.0%
ACAAAGAGGGGTTTACATGA+TGG - chr2_3:51233378-51233397 Msa0297570:intron 40.0%
!! GTCACTTTGACTTGAATCAG+TGG + chr2_3:51233409-51233428 None:intergenic 40.0%
GCACATCCTTTACTTCTTAC+CGG + chr2_3:51233456-51233475 None:intergenic 40.0%
! CTTTAGCTTCGTCACTTACT+CGG - chr2_3:51233478-51233497 Msa0297570:intron 40.0%
TTAGCATGATGTCGACGTAT+TGG + chr2_3:51233567-51233586 None:intergenic 40.0%
!! TTTCGGTTGTTAGGTTGATG+AGG - chr2_3:51234032-51234051 Msa0297570:intron 40.0%
!! CTGATGATTGGTCTCTTGAA+AGG + chr2_3:51234081-51234100 None:intergenic 40.0%
TGACTGAAAGGGGGAAATTG+CGG + chr2_3:51228294-51228313 None:intergenic 45.0%
! TTTTCTTTCTCGTTGGCCAC+CGG - chr2_3:51228490-51228509 Msa0297570:CDS 45.0%
GGAAAAAGTAATCTCACCGG+TGG + chr2_3:51228509-51228528 None:intergenic 45.0%
GAGAGATCGAGCACGAAATT+GGG - chr2_3:51228572-51228591 Msa0297570:intron 45.0%
GAGTTGTAGTCATGGACCTT+GGG + chr2_3:51228859-51228878 None:intergenic 45.0%
TGAGTTGTAGTCATGGACCT+TGG + chr2_3:51228860-51228879 None:intergenic 45.0%
ATTGAGCAGCCAATGGTTTG+TGG - chr2_3:51229276-51229295 Msa0297570:CDS 45.0%
CAGAATCATGTCCTTCGCAT+GGG - chr2_3:51229543-51229562 Msa0297570:CDS 45.0%
! TCCTTCGCATGGGAGTTTTT+CGG - chr2_3:51229553-51229572 Msa0297570:CDS 45.0%
TGTTGGGTCAAAGTTAGAGG+AGG - chr2_3:51229966-51229985 Msa0297570:CDS 45.0%
GTGTGTGGCATGAAATGTGT+TGG + chr2_3:51230497-51230516 None:intergenic 45.0%
! GTTTACATTTCAGGAGGTGC+GGG + chr2_3:51230640-51230659 None:intergenic 45.0%
!!! CAAGCCGGTCTGTGTTTTTT+AGG + chr2_3:51230677-51230696 None:intergenic 45.0%
AAAAAGGTGGAGACACAAGC+CGG + chr2_3:51230692-51230711 None:intergenic 45.0%
GGATGAATCTGTTGCATCTG+TGG - chr2_3:51231219-51231238 Msa0297570:intron 45.0%
TGAATCTGTTGCATCTGTGG+AGG - chr2_3:51231222-51231241 Msa0297570:intron 45.0%
!! GAAGCTTTGTTTGTTGTGGC+AGG - chr2_3:51231352-51231371 Msa0297570:CDS 45.0%
GACTAGAAGGCTTGTCAGAT+GGG - chr2_3:51231375-51231394 Msa0297570:exon 45.0%
ACTAGAAGGCTTGTCAGATG+GGG - chr2_3:51231376-51231395 Msa0297570:exon 45.0%
CAAGGAGGATATTCTTCGCA+TGG - chr2_3:51231490-51231509 Msa0297570:intron 45.0%
TATTCTTCGCATGGACCTGA+AGG - chr2_3:51231499-51231518 Msa0297570:intron 45.0%
ATTCTTCGCATGGACCTGAA+GGG - chr2_3:51231500-51231519 Msa0297570:intron 45.0%
ACCTTTGTCTGCCATAGACA+AGG - chr2_3:51231668-51231687 Msa0297570:intron 45.0%
CCTTTGTCTGCCATAGACAA+GGG - chr2_3:51231669-51231688 Msa0297570:intron 45.0%
TCTGCCATAGACAAGGGTTT+AGG - chr2_3:51231675-51231694 Msa0297570:intron 45.0%
CTGCCATAGACAAGGGTTTA+GGG - chr2_3:51231676-51231695 Msa0297570:intron 45.0%
GCAGATGAACGACATGTTGA+AGG - chr2_3:51231910-51231929 Msa0297570:intron 45.0%
GACATGTTGAAGGTTGGGAT+AGG - chr2_3:51231920-51231939 Msa0297570:intron 45.0%
TCTTTGGCAAACCAATCAGG+AGG - chr2_3:51231962-51231981 Msa0297570:intron 45.0%
CTTTGGCAAACCAATCAGGA+GGG - chr2_3:51231963-51231982 Msa0297570:intron 45.0%
!!! CGCCTTTTAAAACGGTGTGA+TGG - chr2_3:51232040-51232059 Msa0297570:intron 45.0%
TCTACAATATCTTCGTGGGC+TGG - chr2_3:51232072-51232091 Msa0297570:intron 45.0%
!!! GAACACCTGTTTTGGTGTGA+CGG - chr2_3:51232151-51232170 Msa0297570:intron 45.0%
! TGTCCCTTAGTGGTGTTTTC+TGG - chr2_3:51232250-51232269 Msa0297570:intron 45.0%
ACGCCAGAAAACACCACTAA+GGG + chr2_3:51232256-51232275 None:intergenic 45.0%
AACGCCAGAAAACACCACTA+AGG + chr2_3:51232257-51232276 None:intergenic 45.0%
TCGGTTCAGGATATGCATGT+TGG - chr2_3:51232528-51232547 Msa0297570:intron 45.0%
CGGTTCAGGATATGCATGTT+GGG - chr2_3:51232529-51232548 Msa0297570:intron 45.0%
! TTGGGTTGCATGACAACAAG+TGG - chr2_3:51232605-51232624 Msa0297570:intron 45.0%
TGGGTTGCATGACAACAAGT+GGG - chr2_3:51232606-51232625 Msa0297570:intron 45.0%
CAATAATATGCTCGCATGGG+AGG + chr2_3:51233110-51233129 None:intergenic 45.0%
TTCGCATTCTTTGTCCACCT+AGG + chr2_3:51233183-51233202 None:intergenic 45.0%
TAGGTGGACAAAGAATGCGA+AGG - chr2_3:51233182-51233201 Msa0297570:intron 45.0%
AAGAGGGGTTTACATGATGG+CGG - chr2_3:51233381-51233400 Msa0297570:intron 45.0%
CAGGATCCCTCAATATCTCA+TGG + chr2_3:51233431-51233450 None:intergenic 45.0%
CGTCACTTACTCGGAAGAAA+AGG - chr2_3:51233487-51233506 Msa0297570:intron 45.0%
GGAAGAAAAGGAAGCGAACT+CGG - chr2_3:51233499-51233518 Msa0297570:intron 45.0%
GAAAAGTGATGCACCTTGTG+AGG - chr2_3:51233774-51233793 Msa0297570:intron 45.0%
ACTTTGAATTGCAGGCGATG+TGG + chr2_3:51233984-51234003 None:intergenic 45.0%
TGGCAGTTTCTCAAAGTCAC+AGG + chr2_3:51234292-51234311 None:intergenic 45.0%
CTACCCCAACAATCCGTGAA+TGG - chr2_3:51228374-51228393 Msa0297570:three_prime_UTR 50.0%
! GCTAAGAATCTGTGGCGGAA+AGG - chr2_3:51228449-51228468 Msa0297570:CDS 50.0%
GGAGAGATCGAGCACGAAAT+TGG - chr2_3:51228571-51228590 Msa0297570:intron 50.0%
! AGCAGCCAATGGTTTGTGGA+TGG - chr2_3:51229280-51229299 Msa0297570:CDS 50.0%
!! AGTGTCGACATCGACACACA+TGG + chr2_3:51229416-51229435 None:intergenic 50.0%
GCAGAATCATGTCCTTCGCA+TGG - chr2_3:51229542-51229561 Msa0297570:CDS 50.0%
! CCTTCGCATGGGAGTTTTTC+GGG - chr2_3:51229554-51229573 Msa0297570:CDS 50.0%
CAGACTCGTTGCATGGCTAA+TGG - chr2_3:51230051-51230070 Msa0297570:CDS 50.0%
GAGGGAGGTAGTAATTGTGG+AGG + chr2_3:51230618-51230637 None:intergenic 50.0%
GGGGCTGTTTACATTTCAGG+AGG + chr2_3:51230646-51230665 None:intergenic 50.0%
! GGAATCCGAAGGACTGCTTT+TGG + chr2_3:51230719-51230738 None:intergenic 50.0%
! CGAATGGTGTTGGAATCCGA+AGG + chr2_3:51230730-51230749 None:intergenic 50.0%
AGGCGCGTTTGTTCTACGAA+TGG + chr2_3:51230746-51230765 None:intergenic 50.0%
TCTAACTCGGCTGAAGACTC+AGG + chr2_3:51230766-51230785 None:intergenic 50.0%
AAAGGTCGTATCTTGGCGGT+GGG + chr2_3:51230790-51230809 None:intergenic 50.0%
TAAAGGTCGTATCTTGGCGG+TGG + chr2_3:51230791-51230810 None:intergenic 50.0%
TTGTTGTGGCAGGGACTAGA+AGG - chr2_3:51231362-51231381 Msa0297570:CDS 50.0%
GGACTAGAAGGCTTGTCAGA+TGG - chr2_3:51231374-51231393 Msa0297570:exon 50.0%
GAGACTGTTGACGATGATGC+CGG - chr2_3:51231419-51231438 Msa0297570:five_prime_UTR 50.0%
GATCAAGTCCCCATGAGACA+AGG - chr2_3:51231522-51231541 Msa0297570:intron 50.0%
CCCTTGTCTATGGCAGACAA+AGG + chr2_3:51231672-51231691 None:intergenic 50.0%
CCTCCCTAAACCCTTGTCTA+TGG + chr2_3:51231682-51231701 None:intergenic 50.0%
CCATAGACAAGGGTTTAGGG+AGG - chr2_3:51231679-51231698 Msa0297570:intron 50.0%
CAAGGGTTTAGGGAGGATAG+AGG - chr2_3:51231686-51231705 Msa0297570:intron 50.0%
CGGGTTTACACTCACGCTTA+CGG + chr2_3:51231727-51231746 None:intergenic 50.0%
GTGAGTGTAAACCCGAGACT+CGG - chr2_3:51231732-51231751 Msa0297570:intron 50.0%
TTCACATCCACACCGAGTCT+CGG + chr2_3:51231747-51231766 None:intergenic 50.0%
GTGTGACGGTATTAGCCAGT+TGG - chr2_3:51232165-51232184 Msa0297570:intron 50.0%
CTGAACCGACCCACAAATTC+AGG + chr2_3:51232517-51232536 None:intergenic 50.0%
! CTGAATTTGTGGGTCGGTTC+AGG - chr2_3:51232515-51232534 Msa0297570:intron 50.0%
TGAATGTAACCCCTCAACCC+GGG + chr2_3:51232713-51232732 None:intergenic 50.0%
CTGAATGTAACCCCTCAACC+CGG + chr2_3:51232714-51232733 None:intergenic 50.0%
TCTTGCACGGTCTGCAGATA+TGG - chr2_3:51232942-51232961 Msa0297570:intron 50.0%
ACCAAGCATCTAAACGGGAG+TGG - chr2_3:51233019-51233038 Msa0297570:intron 50.0%
TCCACTCCCGTTTAGATGCT+TGG + chr2_3:51233023-51233042 None:intergenic 50.0%
TGCAGAATTGCCGAAGACTC+TGG - chr2_3:51233152-51233171 Msa0297570:intron 50.0%
AGAATTGCCGAAGACTCTGG+TGG - chr2_3:51233155-51233174 Msa0297570:intron 50.0%
GATATTGAGGGATCCTGCTC+CGG - chr2_3:51233434-51233453 Msa0297570:intron 50.0%
CCTTTACTTCTTACCGGAGC+AGG + chr2_3:51233450-51233469 None:intergenic 50.0%
CCTGCTCCGGTAAGAAGTAA+AGG - chr2_3:51233447-51233466 Msa0297570:intron 50.0%
GGCATGCATGTGTGTCAACA+TGG - chr2_3:51234053-51234072 Msa0297570:intron 50.0%
TGCGGCGTGAAGTGAAGTGA+GGG + chr2_3:51228424-51228443 None:intergenic 55.0%
TTGCGGCGTGAAGTGAAGTG+AGG + chr2_3:51228425-51228444 None:intergenic 55.0%
CCCGAAAAACTCCCATGCGA+AGG + chr2_3:51229557-51229576 None:intergenic 55.0%
!! CTATCTAGGTGGGCTAGTGG+TGG + chr2_3:51230538-51230557 None:intergenic 55.0%
!! GTGCTATCTAGGTGGGCTAG+TGG + chr2_3:51230541-51230560 None:intergenic 55.0%
GCGGTGACAGTAGGACTTAG+AGG + chr2_3:51230575-51230594 None:intergenic 55.0%
CGGGAGGGAGGTAGTAATTG+TGG + chr2_3:51230621-51230640 None:intergenic 55.0%
! ACATTTCAGGAGGTGCGGGA+GGG + chr2_3:51230636-51230655 None:intergenic 55.0%
! TACATTTCAGGAGGTGCGGG+AGG + chr2_3:51230637-51230656 None:intergenic 55.0%
AAGGTCGTATCTTGGCGGTG+GGG + chr2_3:51230789-51230808 None:intergenic 55.0%
CGATGATGCCGGTAGTGTTG+AGG - chr2_3:51231430-51231449 Msa0297570:five_prime_UTR 55.0%
! ATGCCGGTAGTGTTGAGGCT+GGG - chr2_3:51231435-51231454 Msa0297570:five_prime_UTR 55.0%
TTCCCCAGCCTCAACACTAC+CGG + chr2_3:51231441-51231460 None:intergenic 55.0%
CATGGGGACTTGATCCCTTC+AGG + chr2_3:51231517-51231536 None:intergenic 55.0%
!! TGTAAACCCGAGACTCGGTG+TGG - chr2_3:51231737-51231756 Msa0297570:intron 55.0%
TCACATCCACACCGAGTCTC+GGG + chr2_3:51231746-51231765 None:intergenic 55.0%
CGCAACGCAGCATCTAACGT+TGG - chr2_3:51232487-51232506 Msa0297570:intron 55.0%
TTGGTGAGTTTCGGCGCAAG+TGG - chr2_3:51232563-51232582 Msa0297570:intron 55.0%
!! TCGGCGCAAGTGGACTGAAA+TGG - chr2_3:51232573-51232592 Msa0297570:intron 55.0%
ATTGCCGCGTATGTGTGCTG+TGG + chr2_3:51232665-51232684 None:intergenic 55.0%
CTGGGTTCAGAACTACCTCC+CGG - chr2_3:51232692-51232711 Msa0297570:intron 55.0%
TGGGTTCAGAACTACCTCCC+GGG - chr2_3:51232693-51232712 Msa0297570:intron 55.0%
! AGAACTACCTCCCGGGTTGA+GGG - chr2_3:51232700-51232719 Msa0297570:intron 55.0%
!! CAAAGCATGGAGCGTTGTGC+TGG - chr2_3:51232877-51232896 Msa0297570:intron 55.0%
! CTAGGTGCCACCAGAGTCTT+CGG + chr2_3:51233165-51233184 None:intergenic 55.0%
CTTGGCGGTGGGGTCTAACT+CGG + chr2_3:51230779-51230798 None:intergenic 60.0%
! GATGCCGGTAGTGTTGAGGC+TGG - chr2_3:51231434-51231453 Msa0297570:five_prime_UTR 60.0%
! TGCCGGTAGTGTTGAGGCTG+GGG - chr2_3:51231436-51231455 Msa0297570:intron 60.0%
! GGTAGTGTTGAGGCTGGGGA+AGG - chr2_3:51231440-51231459 Msa0297570:intron 60.0%
TGGGCCACAGCACACATACG+CGG - chr2_3:51232658-51232677 Msa0297570:intron 60.0%
CAGAACTACCTCCCGGGTTG+AGG - chr2_3:51232699-51232718 Msa0297570:intron 60.0%
! GAACTACCTCCCGGGTTGAG+GGG - chr2_3:51232701-51232720 Msa0297570:intron 60.0%
ATGTAACCCCTCAACCCGGG+AGG + chr2_3:51232710-51232729 None:intergenic 60.0%
CGAAGACTCTGGTGGCACCT+AGG - chr2_3:51233163-51233182 Msa0297570:intron 60.0%
AGACTCTGGTGGCACCTAGG+TGG - chr2_3:51233166-51233185 Msa0297570:intron 60.0%
! TTTCAGGAGGTGCGGGAGGG+AGG + chr2_3:51230633-51230652 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 51228137 51234435 51228137 ID=Msa0297570;Name=Msa0297570
chr2_3 mRNA 51228137 51234435 51228137 ID=Msa0297570-mRNA-1;Parent=Msa0297570;Name=Msa0297570-mRNA-1;_AED=0.12;_eAED=0.12;_QI=444|0.66|1|1|0.66|0.5|4|298|805
chr2_3 exon 51228137 51228527 51228137 ID=Msa0297570-mRNA-1:exon:16274;Parent=Msa0297570-mRNA-1
chr2_3 exon 51228931 51231198 51228931 ID=Msa0297570-mRNA-1:exon:16273;Parent=Msa0297570-mRNA-1
chr2_3 exon 51231329 51231454 51231329 ID=Msa0297570-mRNA-1:exon:16272;Parent=Msa0297570-mRNA-1
chr2_3 exon 51234061 51234435 51234061 ID=Msa0297570-mRNA-1:exon:16271;Parent=Msa0297570-mRNA-1
chr2_3 five_prime_UTR 51234061 51234435 51234061 ID=Msa0297570-mRNA-1:five_prime_utr;Parent=Msa0297570-mRNA-1
chr2_3 five_prime_UTR 51231386 51231454 51231386 ID=Msa0297570-mRNA-1:five_prime_utr;Parent=Msa0297570-mRNA-1
chr2_3 CDS 51231329 51231385 51231329 ID=Msa0297570-mRNA-1:cds;Parent=Msa0297570-mRNA-1
chr2_3 CDS 51228931 51231198 51228931 ID=Msa0297570-mRNA-1:cds;Parent=Msa0297570-mRNA-1
chr2_3 CDS 51228435 51228527 51228435 ID=Msa0297570-mRNA-1:cds;Parent=Msa0297570-mRNA-1
chr2_3 three_prime_UTR 51228137 51228434 51228137 ID=Msa0297570-mRNA-1:three_prime_utr;Parent=Msa0297570-mRNA-1
Gene Sequence

>Msa0297570

ATGGAAAATAATGTTGAAGAGAATATGCAGATGGATGAATCTGTTGCATCTGTGGAGGGACTAGAAGGCTTGTCAGATGGGGTAAGTGATGAAGCAACATTTGAGACTGTTGACGATGATGCCGGTAGTGTTGAGGCTGGGGAAGGTACCGAAGAAATTACATATATTGATAACAAGGAGGATATTCTTCGCATGGACCTGAAGGGATCAAGTCCCCATGAGACAAGGAAATTTGAGTTTTCAAGTTTGGATATGGCTTATGAGTTCTATAACTGGTATGCTAGAATGAATGGGTTTGCGGTCCGCAAGAGCAAGATGATTAAAAGCAATAAAGGGGAACTATTACAGCAAACCTTTGTCTGCCATAGACAAGGGTTTAGGGAGGATAGAGGTTTAACAATAGAAAACCGTAAGCGTGAGTGTAAACCCGAGACTCGGTGTGGATGTGAAGCAAAATTTCGGGTGCATATAGATATGTTCTCACAACGTTGGTTGATAACTGTTTTTACCGATCAACACAACCATGAGCTTTTAGGTGAAGAGTACAATGGAATGCTTGCTGCACATCGAAAAATGAAAGAGTCGGATATAATGCAGATGAACGACATGTTGAAGGTTGGGATAGGGCCGTCTCGATTCTATAGTTCTTTGGCAAACCAATCAGGAGGGTATGAAAAGATAGGGTTTCGAAAGAAGGATATATATAATCAGATAGGAAAGCAACGCCTTTTAAAACGGTGTGATGGTAAAAATGCTCTACAATATCTTCGTGGGCTGGCATCAAATGACTCGATGATGTTTTATCGCCACACCGTTGATGGAGAAGGTAGACTTGAACACCTGTTTTGGTGTGACGGTATTAGCCAGTTGGAATACAATGTTTATGGTGATGTGTTGGCATTTGATGCAACATATGGAACAAACAAATATCATTGTCCCTTAGTGGTGTTTTCTGGCGTTAATAACCATAATCATAACGTTATATTTGCTGGTGCTATTGTTGCAAATGAAAAAGAAGAAACTTATGTGTGGGTTCTTGAACAATTTTTGGAAGCAATGTCTGGCAAATCGCCTATATCTGTCATTACTGATGGCGATCTTGCAATGAAGAATGCTATTAAAAAGGTGTTTCCAAATGCTTATCATAGATTGTGTGCTTGGCATCTAATTCGCAACGCAGCATCTAACGTTGGAATTCCTGAATTTGTGGGTCGGTTCAGGATATGCATGTTGGGTGATTATGATCTTGGTGAGTTTCGGCGCAAGTGGACTGAAATGGTTGATACATTTGGGTTGCATGACAACAAGTGGGTTAAAGAGTTGTATGCAAAGAGAAAGATGTGGGCCACAGCACACATACGCGGCAATTTTTTTGCTGGGTTCAGAACTACCTCCCGGGTTGAGGGGTTACATTCAGAAATGGGGAAGTTTCTTGACTCGCGATATAATTTGACTGACTTTTTGCTACATTTTCATCGATGCCTTAATTACATGCGTTTCAAGGAGGTTGAAGCTGACTTTTCTTCTAATTACGGTGATCCGGTACTACAAACAAGATTTCAAAGCATGGAGCGTTGTGCTGGAAAGTTATTTACTCGAGAACTATTCTTAATATTTCGTGATATTCTTGCACGGTCTGCAGATATGGTCGTGACAGCATGCAATCAAACTTACACATGCTTCATATACACAGTTTGTAAGTACCAAGCATCTAAACGGGAGTGGAACATATCATTTTATCCAGATGATGATGTGTTCAAGTGTTCTTGCAAGAAGATGGAGTCATTTGGCCTCCCATGCGAGCATATTATTGCACTATTGGTTTTTTTGGATGTTGCAGAATTGCCGAAGACTCTGGTGGCACCTAGGTGGACAAAGAATGCGAAGGAAGCAGTATGTAGCACAAATAAGCCTCTTCCAAAATATTGGGATTCACATAAGTCGTCTAGATATTCTGCTCTTTTGTTTCGATATATGCGTTTGAGCAAATTAGCAAGTGAGAGTGGTGATGATTTCAATGATCATATGGAGCAGGCTGCTGCTGATATTCAGAAGATGGAAACAAAGAGGGGTTTACATGATGGCGGAGCCACTGATTCAAGTCAAAGTGACCATGAGATATTGAGGGATCCTGCTCCGGTAAGAAGTAAAGGATGTGCTGCTTTAGCTTCGTCACTTACTCGGAAGAAAAGGAAGCGAACTCGGTGTTCTACTTGTAGAGAATTCGGACATAATAAACAAACGTGTCCAATACGTCGACATCATGCTAACACGACACATTCACCACATGAAGATCATCACAACAATGACTTCAGTGACAACTCTGTTGATGAGGCATGCATGTGTGTCAACATGGATCCTTTCAAGAGACCAATCATCAGAGAATTTGTTGAATGGCTAAATAAAGAATGTTCATAG
Protein sequence

>Msa0297570

MENNVEENMQMDESVASVEGLEGLSDGVSDEATFETVDDDAGSVEAGEGTEEITYIDNKEDILRMDLKGSSPHETRKFEFSSLDMAYEFYNWYARMNGFAVRKSKMIKSNKGELLQQTFVCHRQGFREDRGLTIENRKRECKPETRCGCEAKFRVHIDMFSQRWLITVFTDQHNHELLGEEYNGMLAAHRKMKESDIMQMNDMLKVGIGPSRFYSSLANQSGGYEKIGFRKKDIYNQIGKQRLLKRCDGKNALQYLRGLASNDSMMFYRHTVDGEGRLEHLFWCDGISQLEYNVYGDVLAFDATYGTNKYHCPLVVFSGVNNHNHNVIFAGAIVANEKEETYVWVLEQFLEAMSGKSPISVITDGDLAMKNAIKKVFPNAYHRLCAWHLIRNAASNVGIPEFVGRFRICMLGDYDLGEFRRKWTEMVDTFGLHDNKWVKELYAKRKMWATAHIRGNFFAGFRTTSRVEGLHSEMGKFLDSRYNLTDFLLHFHRCLNYMRFKEVEADFSSNYGDPVLQTRFQSMERCAGKLFTRELFLIFRDILARSADMVVTACNQTYTCFIYTVCKYQASKREWNISFYPDDDVFKCSCKKMESFGLPCEHIIALLVFLDVAELPKTLVAPRWTKNAKEAVCSTNKPLPKYWDSHKSSRYSALLFRYMRLSKLASESGDDFNDHMEQAAADIQKMETKRGLHDGGATDSSQSDHEILRDPAPVRSKGCAALASSLTRKKRKRTRCSTCREFGHNKQTCPIRRHHANTTHSPHEDHHNNDFSDNSVDEACMCVNMDPFKRPIIREFVEWLNKECS*