AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1448790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1448790 MtrunA17_Chr1g0203051 48.986 592 298 1 25 616 34 621 0.0 631
Msa1448790 MtrunA17_Chr2g0287651 34.218 678 436 4 74 749 75 744 5.76e-132 414
Msa1448790 MtrunA17_Chr5g0448761 30.635 630 418 10 79 691 65 692 4.05e-100 328
Msa1448790 MtrunA17_Chr1g0202341 32.143 560 367 6 79 630 56 610 6.68e-100 324
Msa1448790 MtrunA17_Chr8g0363841 29.947 561 380 6 81 632 24 580 2.93e-85 285
Msa1448790 MtrunA17_Chr1g0198761 28.255 722 457 18 80 764 53 750 2.17e-83 282
Msa1448790 MtrunA17_Chr3g0082121 28.443 668 425 13 14 672 12 635 4.50e-80 271
Msa1448790 MtrunA17_Chr2g0308841 49.091 220 112 0 409 628 7 226 8.24e-76 246
Msa1448790 MtrunA17_Chr2g0324011 27.788 565 387 9 80 632 16 571 1.57e-75 256
Msa1448790 MtrunA17_Chr6g0458391 27.469 557 375 11 80 629 231 765 1.59e-70 247
Msa1448790 MtrunA17_Chr6g0458391 29.358 218 111 8 33 222 47 249 2.81e-15 80.1
Msa1448790 MtrunA17_Chr2g0296781 28.852 662 429 17 80 718 3 645 2.44e-70 246
Msa1448790 MtrunA17_Chr5g0441581 27.357 647 434 15 37 670 1 624 5.96e-69 241
Msa1448790 MtrunA17_Chr1g0203721 27.070 628 426 13 80 686 69 685 5.31e-68 242
Msa1448790 MtrunA17_Chr5g0431001 33.182 440 269 10 72 491 61 495 3.27e-67 231
Msa1448790 MtrunA17_Chr6g0477261 32.522 452 274 10 198 629 5 445 2.86e-65 230
Msa1448790 MtrunA17_Chr2g0287061 28.623 559 352 13 79 632 188 704 1.93e-63 228
Msa1448790 MtrunA17_Chr5g0448511 28.974 390 271 2 249 633 13 401 2.20e-63 222
Msa1448790 MtrunA17_Chr3g0118611 28.802 434 301 3 248 676 118 548 2.67e-63 227
Msa1448790 MtrunA17_Chr1g0207551 27.817 568 378 14 78 629 38 589 5.52e-63 226
Msa1448790 MtrunA17_Chr2g0329031 27.402 562 380 12 77 628 17 560 4.74e-61 220
Msa1448790 MtrunA17_Chr2g0276841 25.841 565 387 12 80 626 76 626 1.11e-60 218
Msa1448790 MtrunA17_Chr3g0080351 26.861 618 397 15 78 673 80 664 1.08e-59 218
Msa1448790 MtrunA17_Chr2g0291581 27.304 586 365 17 72 629 69 621 4.11e-57 207
Msa1448790 MtrunA17_Chr5g0440451 24.914 582 383 11 80 631 49 606 4.64e-57 211
Msa1448790 MtrunA17_Chr2g0290391 26.049 572 376 12 80 624 57 608 8.09e-55 201
Msa1448790 MtrunA17_Chr2g0291591 27.656 546 354 14 44 570 36 559 1.68e-52 192
Msa1448790 MtrunA17_Chr2g0294841 25.318 628 402 16 29 624 11 603 2.13e-52 195
Msa1448790 MtrunA17_Chr1g0196541 26.748 572 379 12 80 629 3 556 2.05e-51 192
Msa1448790 MtrunA17_Chr1g0171741 46.193 197 95 4 11 203 72 261 1.68e-48 172
Msa1448790 MtrunA17_Chr1g0164591 30.263 304 200 3 163 461 11 307 2.41e-42 157
Msa1448790 MtrunA17_Chr8g0389811 38.889 180 98 2 18 185 16 195 1.41e-34 131
Msa1448790 MtrunA17_Chr2g0331371 40.645 155 84 2 56 210 37 183 1.59e-31 122
Msa1448790 MtrunA17_Chr7g0258861 26.481 287 205 4 80 362 16 300 1.16e-28 117
Msa1448790 MtrunA17_Chr6g0473421 48.421 95 49 0 56 150 37 131 6.49e-26 104
Msa1448790 MtrunA17_Chr8g0340801 40.952 105 62 0 185 289 1 105 3.78e-22 92.0
Msa1448790 MtrunA17_Chr1g0172931 41.284 109 63 1 48 156 51 158 9.36e-22 92.8
Msa1448790 MtrunA17_Chr1g0149131 30.909 110 71 1 353 457 1 110 6.75e-13 66.2
Msa1448790 MtrunA17_Chr4g0033611 31.638 177 87 8 28 177 7 176 4.10e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1448790 AT4G38180.1 30.735 667 432 17 11 654 2 661 1.47e-95 316
Msa1448790 AT3G06250.2 28.947 570 346 13 68 629 186 704 1.08e-70 248
Msa1448790 AT3G06250.1 28.947 570 346 13 68 629 186 704 1.08e-70 248
Msa1448790 AT3G06250.3 28.947 570 346 13 68 629 186 704 1.08e-70 248
Msa1448790 AT5G18960.2 28.988 583 334 17 67 629 206 728 5.01e-69 243
Msa1448790 AT5G18960.1 28.988 583 334 17 67 629 206 728 5.01e-69 243
Msa1448790 AT4G15090.1 26.603 624 402 15 78 673 55 650 5.41e-64 230
Msa1448790 AT4G15090.5 26.603 624 402 15 78 673 55 650 5.41e-64 230
Msa1448790 AT4G15090.3 26.603 624 402 15 78 673 55 650 5.41e-64 230
Msa1448790 AT4G15090.2 26.603 624 402 15 78 673 55 650 5.41e-64 230
Msa1448790 AT4G15090.4 26.603 624 402 15 78 673 55 650 5.41e-64 230
Msa1448790 AT3G22170.2 26.016 615 406 13 78 673 74 658 4.98e-63 227
Msa1448790 AT3G22170.1 26.016 615 406 13 78 673 74 658 4.98e-63 227
Msa1448790 AT1G10240.2 26.250 560 391 12 80 626 54 604 7.13e-61 218
Msa1448790 AT1G10240.1 26.250 560 391 12 80 626 54 604 7.13e-61 218
Msa1448790 AT2G27110.2 25.312 561 382 11 78 632 53 582 1.34e-60 221
Msa1448790 AT2G27110.1 25.312 561 382 11 78 632 53 582 1.34e-60 221
Msa1448790 AT5G28530.1 26.178 573 386 12 80 628 61 620 1.69e-56 206
Msa1448790 AT5G28530.3 26.252 579 374 14 80 628 61 616 6.26e-56 204
Msa1448790 AT5G28530.2 26.252 579 374 14 80 628 61 616 6.26e-56 204
Msa1448790 AT1G52520.1 27.273 583 358 16 79 629 90 638 1.10e-55 204
Msa1448790 AT1G76320.3 27.289 568 371 14 79 629 2 544 1.64e-55 203
Msa1448790 AT1G76320.1 27.289 568 371 14 79 629 2 544 3.27e-55 203
Msa1448790 AT1G76320.4 27.289 568 371 14 79 629 2 544 3.27e-55 203
Msa1448790 AT1G76320.2 27.289 568 371 14 79 629 2 544 3.55e-55 203
Msa1448790 AT1G80010.1 28.473 583 380 16 71 629 92 661 1.24e-54 201
Msa1448790 AT2G27110.3 26.854 391 276 5 248 632 51 437 4.40e-54 199
Msa1448790 AT2G32250.5 24.212 603 388 13 79 668 43 589 2.06e-49 187
Msa1448790 AT2G32250.7 24.212 603 388 13 79 668 2 548 2.22e-49 187
Msa1448790 AT2G32250.8 24.212 603 388 13 79 668 2 548 2.42e-49 187
Msa1448790 AT2G32250.2 24.212 603 388 13 79 668 43 589 3.33e-49 187
Msa1448790 AT2G32250.4 24.212 603 388 13 79 668 43 589 3.33e-49 187
Msa1448790 AT2G32250.6 24.212 603 388 13 79 668 43 589 3.42e-49 187
Msa1448790 AT2G32250.1 24.212 603 388 13 79 668 43 589 3.42e-49 187
Msa1448790 AT2G32250.3 24.212 603 388 13 79 668 43 589 3.42e-49 187
Msa1448790 AT4G38170.1 27.809 356 250 3 280 629 45 399 6.47e-49 182
Msa1448790 AT4G19990.3 24.884 647 401 17 79 692 26 620 1.07e-46 179
Msa1448790 AT4G19990.4 24.884 647 401 17 79 692 26 620 1.07e-46 179
Msa1448790 AT4G19990.5 24.884 647 401 17 79 692 26 620 1.12e-46 179
Msa1448790 AT4G19990.6 24.884 647 401 17 79 692 26 620 1.18e-46 179
Msa1448790 AT4G19990.2 24.884 647 401 17 79 692 26 620 1.18e-46 179
Msa1448790 AT4G19990.7 24.884 647 401 17 79 692 40 634 1.52e-46 178
Msa1448790 AT4G19990.1 23.974 609 387 15 112 692 3 563 9.37e-42 163
Msa1448790 AT5G28530.4 23.614 559 355 14 80 628 61 557 5.69e-40 157
Msa1448790 AT5G28530.5 23.717 565 343 16 80 628 61 553 2.16e-39 155

Find 199 sgRNAs with CRISPR-Local

Find 399 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAGAGTGGTAACTGATTT+TGG 0.153996 tig0032326:-28835 None:intergenic
TTATGTGAATCCCAATATTT+TGG 0.174029 tig0032326:-33821 None:intergenic
CAAATATAACGTTATGATTA+TGG 0.220259 tig0032326:-32869 None:intergenic
ATAAGCCTCTTCCAAAATAT+TGG 0.226456 tig0032326:+33810 Msa1448790:CDS
CAGTTGGAATACAATGTTTA+TGG 0.237348 tig0032326:+32768 Msa1448790:CDS
CGAGCATATTATTGCACTAT+TGG 0.263946 tig0032326:+33703 Msa1448790:CDS
CCTTGAAACGCATGTAATTA+AGG 0.299268 tig0032326:-33385 None:intergenic
GTCTCGATTCTATAGTTCTT+TGG 0.305028 tig0032326:+32533 Msa1448790:CDS
TACGTGAATTGTTGCTAAAT+AGG 0.306357 tig0032326:+34907 Msa1448790:three_prime_UTR
CTGAGTTTGTGGGTCGGTTC+AGG 0.307659 tig0032326:+33102 Msa1448790:CDS
AAGATGATTAAAAGCAATAA+AGG 0.314816 tig0032326:+32216 Msa1448790:CDS
CTGCCATAGACAAGGGTTTA+GGG 0.319412 tig0032326:+32263 Msa1448790:CDS
TAAACCATTCACGGATTGTT+GGG 0.328289 tig0032326:-29049 None:intergenic
AATGAAGAATGCTATTAAAA+AGG 0.328811 tig0032326:+33007 Msa1448790:CDS
AATCATAACGTTATATTTGC+TGG 0.332689 tig0032326:+32873 Msa1448790:CDS
CATGGGGACTTGATCCCTTC+AGG 0.334509 tig0032326:-32101 None:intergenic
ATTATGATCTTGGTGAGTTT+CGG 0.343046 tig0032326:+33141 Msa1448790:CDS
TAAGCCTCTTCCAAAATATT+GGG 0.343348 tig0032326:+33811 Msa1448790:CDS
TCTGCCATAGACAAGGGTTT+AGG 0.350465 tig0032326:+32262 Msa1448790:CDS
CGTTGGAATTCCTGAGTTTG+TGG 0.354561 tig0032326:+33091 Msa1448790:CDS
GCACATCCTTTACTTCTTAC+CGG 0.360870 tig0032326:-34040 None:intergenic
TTACCTATTATGTTGAGCTT+TGG 0.362228 tig0032326:+34846 Msa1448790:three_prime_UTR
CCTCCCTAAACCCTTGTCTA+TGG 0.364704 tig0032326:-32266 None:intergenic
TCAGGAGGGTATGAAAAGAT+AGG 0.369722 tig0032326:+32564 Msa1448790:CDS
AGTCCAAAGCTCAACATAAT+AGG 0.372572 tig0032326:-34849 None:intergenic
TCAACAAATTCTCTGATGAT+TGG 0.374918 tig0032326:-34677 None:intergenic
CAAGGGTTTAGGGAGGATAG+AGG 0.385779 tig0032326:+32273 Msa1448790:CDS
GTAGACTTGAACACCTGTTT+TGG 0.386376 tig0032326:+32730 Msa1448790:CDS
ACTGAAATGGTTGATACATT+TGG 0.389032 tig0032326:+33173 Msa1448790:CDS
CTCAAATTTCCTTGTCTCAT+GGG 0.391555 tig0032326:-32118 None:intergenic
TGGATGTGAAGCAAAATTTC+GGG 0.393377 tig0032326:+32344 Msa1448790:CDS
AACTGGTATGCTAGAATGAA+TGG 0.398717 tig0032326:+32174 Msa1448790:CDS
ATCAATATATGTAATTTCTT+CGG 0.400227 tig0032326:-32052 None:intergenic
AGTTCTTTGGCAAACCAATC+AGG 0.400318 tig0032326:+32546 Msa1448790:CDS
CAGAACTACCTCCCGGGTTG+AGG 0.403771 tig0032326:+33286 Msa1448790:CDS
TCCACTCCCGTTTAGATGCT+TGG 0.407392 tig0032326:-33607 None:intergenic
TGAAATCTTGTTTGTAGTAC+CGG 0.408808 tig0032326:-33443 None:intergenic
AGATGATTAAAAGCAATAAA+GGG 0.410338 tig0032326:+32217 Msa1448790:CDS
CACAATCTATGATAAGCATT+TGG 0.411893 tig0032326:-33035 None:intergenic
TAAATATCATTGTCCCTTAG+TGG 0.415174 tig0032326:+32827 Msa1448790:CDS
CTGAAATGGTTGATACATTT+GGG 0.415729 tig0032326:+33174 Msa1448790:CDS
TTGTTGTGGCAGGGACTAGA+AGG 0.416156 tig0032326:+31949 Msa1448790:intron
CTGGGTTCAGAACTACCTCC+CGG 0.421640 tig0032326:+33279 Msa1448790:CDS
TGTTCTACTTGTAGAGAATT+CGG 0.421760 tig0032326:+34109 Msa1448790:CDS
GTGGATGTGAAGCAAAATTT+CGG 0.423877 tig0032326:+32343 Msa1448790:CDS
TGCAAGAAGATGGAGTCATT+TGG 0.424186 tig0032326:+33671 Msa1448790:CDS
TCTTTATGCTTGTCATCTAA+AGG 0.428350 tig0032326:+34933 Msa1448790:three_prime_UTR
TCTTGCACGGTCTGCAGATA+TGG 0.428535 tig0032326:+33529 Msa1448790:CDS
TAATACCGTCACACCAAAAC+AGG 0.430331 tig0032326:-32743 None:intergenic
TGAGGGGTTACATTCAGAAA+TGG 0.433282 tig0032326:+33304 Msa1448790:CDS
TTCTTCTAATTACGGTGATC+CGG 0.435140 tig0032326:+33424 Msa1448790:CDS
CTAGGTGCCACCAGAGTCTT+CGG 0.438729 tig0032326:-33749 None:intergenic
GTAAGTACCAAGCATCTAAA+CGG 0.438925 tig0032326:+33600 Msa1448790:CDS
GAGGGGTTACATTCAGAAAT+GGG 0.440826 tig0032326:+33305 Msa1448790:CDS
CCATCAGTAATGACAGATAT+AGG 0.442377 tig0032326:-32975 None:intergenic
CCTTAATTACATGCGTTTCA+AGG 0.443433 tig0032326:+33385 Msa1448790:CDS
TCATAAAATTAAACCATTCA+CGG 0.444067 tig0032326:-29058 None:intergenic
TGGCTTATGAGTTCTATAAC+TGG 0.448330 tig0032326:+32157 Msa1448790:CDS
TTCACATCCACACCGAGTCT+CGG 0.449810 tig0032326:-32331 None:intergenic
ACTCAAATTTCCTTGTCTCA+TGG 0.450621 tig0032326:-32119 None:intergenic
TTAGCATGATGTCGACGTAT+TGG 0.451740 tig0032326:-34151 None:intergenic
AGAACTACCTCCCGGGTTGA+GGG 0.453294 tig0032326:+33287 Msa1448790:CDS
CCTTTACTTCTTACCGGAGC+AGG 0.454778 tig0032326:-34034 None:intergenic
GACTAGAAGGCTTGTCAGAT+GGG 0.454938 tig0032326:+31962 Msa1448790:CDS
AAGGATATATATAATCAGAT+AGG 0.456945 tig0032326:+32597 Msa1448790:CDS
CAAGTGTTCTTGCAAGAAGA+TGG 0.456949 tig0032326:+33661 Msa1448790:CDS
CACTTGAACACATCATCATC+TGG 0.458537 tig0032326:-33644 None:intergenic
CAAAGCATGGAGCGTTGTGC+TGG 0.460157 tig0032326:+33464 Msa1448790:CDS
TATTCGTGTTGAACAAAGTT+CGG 0.469680 tig0032326:-34977 None:intergenic
TTGGCATTTGATGCAACATA+TGG 0.469717 tig0032326:+32798 Msa1448790:CDS
CTTATCATAGATTGTGTGCT+TGG 0.471231 tig0032326:+33042 Msa1448790:CDS
CATAAACATTGTATTCCAAC+TGG 0.473084 tig0032326:-32767 None:intergenic
TCGGCGCAAGTGGACTGAAA+TGG 0.474417 tig0032326:+33160 Msa1448790:CDS
ATGTTGGGTGATTATGATCT+TGG 0.475526 tig0032326:+33131 Msa1448790:CDS
CGTCACTTACTCGGAAGAAA+AGG 0.476403 tig0032326:+34074 Msa1448790:CDS
CTTTAGCTTCGTCACTTACT+CGG 0.477552 tig0032326:+34065 Msa1448790:CDS
CTGATGATTGGTCTCTTGAA+AGG 0.479719 tig0032326:-34665 None:intergenic
TGAACGACATGTTGAAGGTT+GGG 0.479986 tig0032326:+32502 Msa1448790:CDS
CGGTTCAGGATATGCATGTT+GGG 0.481144 tig0032326:+33116 Msa1448790:CDS
TTGTTTGAACATATTTGAGA+TGG 0.482088 tig0032326:+31755 Msa1448790:exon
GTTGGAATTCCTGAGTTTGT+GGG 0.483948 tig0032326:+33092 Msa1448790:CDS
CGGGTTTACACTCACGCTTA+CGG 0.484549 tig0032326:-32311 None:intergenic
TGATGATTTCAATGATCATA+TGG 0.490037 tig0032326:+33910 Msa1448790:CDS
TCACATCCACACCGAGTCTC+GGG 0.490046 tig0032326:-32330 None:intergenic
GGAGAGGAAACTGATTATTG+AGG 0.496472 tig0032326:-28814 None:intergenic
TAAGTACCAAGCATCTAAAC+GGG 0.498777 tig0032326:+33601 Msa1448790:CDS
AAAGATAGGGTTTCGAAAGA+AGG 0.498787 tig0032326:+32578 Msa1448790:CDS
GATATTGAGGGATCCTGCTC+CGG 0.506504 tig0032326:+34021 Msa1448790:CDS
TTAAACCATTCACGGATTGT+TGG 0.506733 tig0032326:-29050 None:intergenic
TCGGTTCAGGATATGCATGT+TGG 0.508996 tig0032326:+33115 Msa1448790:CDS
TGGCAGTTTCTCAAAGTCAC+AGG 0.510246 tig0032326:-34875 None:intergenic
GGAAGAAAAGGAAGCGAACT+CGG 0.510589 tig0032326:+34086 Msa1448790:CDS
TCATCAGAGAATTTGTTGAA+TGG 0.514239 tig0032326:+34681 Msa1448790:CDS
ATGAACGACATGTTGAAGGT+TGG 0.516485 tig0032326:+32501 Msa1448790:CDS
TGCTAGAATGAATGGGTTTG+CGG 0.520491 tig0032326:+32182 Msa1448790:CDS
ACCTTTGTCTGCCATAGACA+AGG 0.522203 tig0032326:+32255 Msa1448790:CDS
CCTGCTCCGGTAAGAAGTAA+AGG 0.527933 tig0032326:+34034 Msa1448790:CDS
ACATGTTGAAGGTTGGGATA+GGG 0.527977 tig0032326:+32508 Msa1448790:CDS
CTACCCCAACAATCCGTGAA+TGG 0.529060 tig0032326:+29045 Msa1448790:five_prime_UTR
AAGCTCATGGTTGTGTTGAT+CGG 0.533255 tig0032326:-32412 None:intergenic
TTGGTGAGTTTCGGCGCAAG+TGG 0.533626 tig0032326:+33150 Msa1448790:CDS
TATTCTTCGCATGGACCTGA+AGG 0.535724 tig0032326:+32086 Msa1448790:CDS
TTGGGTTGCATGACAACAAG+TGG 0.536611 tig0032326:+33192 Msa1448790:CDS
GCAGATGAACGACATGTTGA+AGG 0.538363 tig0032326:+32497 Msa1448790:CDS
GGACTAGAAGGCTTGTCAGA+TGG 0.538439 tig0032326:+31961 Msa1448790:CDS
CAGGAGGGTATGAAAAGATA+GGG 0.541529 tig0032326:+32565 Msa1448790:CDS
ACTGGTATGCTAGAATGAAT+GGG 0.542467 tig0032326:+32175 Msa1448790:CDS
CTGAATGTAACCCCTCAACC+CGG 0.542990 tig0032326:-33298 None:intergenic
GATGCCGGTAGTGTTGAGGC+TGG 0.544026 tig0032326:+32021 Msa1448790:CDS
TCAGAAGATGGAAACAAAGA+GGG 0.545568 tig0032326:+33952 Msa1448790:CDS
AATGCTCTACAATATCTTCG+TGG 0.547074 tig0032326:+32654 Msa1448790:CDS
AACGCCAGAAAACACCACTA+AGG 0.547338 tig0032326:-32841 None:intergenic
CTGAACCGACCCACAAACTC+AGG 0.548623 tig0032326:-33101 None:intergenic
TGCCGGTAGTGTTGAGGCTG+GGG 0.549068 tig0032326:+32023 Msa1448790:CDS
TGATGGTTTGAGTCTAAGAG+TGG 0.549070 tig0032326:-28848 None:intergenic
TGCTGCTGATATTCAGAAGA+TGG 0.549307 tig0032326:+33940 Msa1448790:CDS
CCTATATCTGTCATTACTGA+TGG 0.550426 tig0032326:+32975 Msa1448790:CDS
ATGCTCTACAATATCTTCGT+GGG 0.552217 tig0032326:+32655 Msa1448790:CDS
ACAAAGAGGGGTTTACATGA+TGG 0.555956 tig0032326:+33965 Msa1448790:CDS
CCCTTTCAGTCAAAATCAGA+AGG 0.557367 tig0032326:+28973 Msa1448790:five_prime_UTR
TTTCAATGATCATATGGAGC+AGG 0.557911 tig0032326:+33916 Msa1448790:CDS
TTCCCCAGCCTCAACACTAC+CGG 0.558077 tig0032326:-32025 None:intergenic
ATATGTGTAGGCAATAGAAA+AGG 0.560818 tig0032326:+31695 Msa1448790:intron
TCAAATTTCCTTGTCTCATG+GGG 0.562298 tig0032326:-32117 None:intergenic
TCTACAATATCTTCGTGGGC+TGG 0.564296 tig0032326:+32659 Msa1448790:CDS
AGTGCAATAATATGCTCGCA+TGG 0.564516 tig0032326:-33698 None:intergenic
ATGCCGGTAGTGTTGAGGCT+GGG 0.568159 tig0032326:+32022 Msa1448790:CDS
CGAAGACTCTGGTGGCACCT+AGG 0.569038 tig0032326:+33750 Msa1448790:CDS
GTGTGACGGTATTAGCCAGT+TGG 0.570082 tig0032326:+32752 Msa1448790:CDS
GGATGAATCTGTTGCATCTG+TGG 0.570836 tig0032326:+31806 Msa1448790:CDS
ACTCTTCACCTAAAAGCTCA+TGG 0.573630 tig0032326:-32425 None:intergenic
CAATGTTTATGGTGATGTGT+TGG 0.573702 tig0032326:+32779 Msa1448790:CDS
CGCCACACTGTTGATGGAGA+AGG 0.573925 tig0032326:+32708 Msa1448790:CDS
AAAGTGACCATGAGATATTG+AGG 0.575026 tig0032326:+34008 Msa1448790:CDS
CAAGGAGGATATTCTTCGCA+TGG 0.577671 tig0032326:+32077 Msa1448790:CDS
AAGTGACCATGAGATATTGA+GGG 0.577878 tig0032326:+34009 Msa1448790:CDS
CAATAATATGCTCGCATGGG+AGG 0.579108 tig0032326:-33694 None:intergenic
ACCAAGCATCTAAACGGGAG+TGG 0.580235 tig0032326:+33606 Msa1448790:CDS
GAATTCCTGAGTTTGTGGGT+CGG 0.582743 tig0032326:+33096 Msa1448790:CDS
AGCAAATTAGCAAGTGAGAG+TGG 0.583973 tig0032326:+33887 Msa1448790:CDS
TTCAGAAGATGGAAACAAAG+AGG 0.584534 tig0032326:+33951 Msa1448790:CDS
AGAAATAGCAACTAGAGAAG+AGG 0.585131 tig0032326:+34723 Msa1448790:exon
GACATGTTGAAGGTTGGGAT+AGG 0.585269 tig0032326:+32507 Msa1448790:CDS
TATTTCGTGATATTCTTGCA+CGG 0.585796 tig0032326:+33516 Msa1448790:CDS
TGCAGAATTGCCGAAGACTC+TGG 0.586703 tig0032326:+33739 Msa1448790:CDS
GGTAGTGTTGAGGCTGGGGA+AGG 0.589625 tig0032326:+32027 Msa1448790:CDS
TTCGCATTCTTTGTCCACCT+AGG 0.592170 tig0032326:-33767 None:intergenic
ACAAACAAGATTTCAAAGCA+TGG 0.592389 tig0032326:+33451 Msa1448790:CDS
AAAAGAAGAAACTTATGTGT+GGG 0.592719 tig0032326:+32914 Msa1448790:CDS
ACGCCAGAAAACACCACTAA+GGG 0.595174 tig0032326:-32840 None:intergenic
TAGATATGTTCTCACAACGT+TGG 0.595477 tig0032326:+32373 Msa1448790:CDS
CAGGATCCCTCAATATCTCA+TGG 0.595823 tig0032326:-34015 None:intergenic
TGGGTTCAGAACTACCTCCC+GGG 0.596128 tig0032326:+33280 Msa1448790:CDS
GTCACTTTGACTTGAATCAG+TGG 0.596570 tig0032326:-33993 None:intergenic
TGCGGCGTGAAGTGAAGTGA+GGG 0.599509 tig0032326:-29092 None:intergenic
GAGACTGTTGACGATGATGC+CGG 0.599698 tig0032326:+32006 Msa1448790:CDS
CCTTTGTCTGCCATAGACAA+GGG 0.606480 tig0032326:+32256 Msa1448790:CDS
GATGATTAAAAGCAATAAAG+GGG 0.606914 tig0032326:+32218 Msa1448790:CDS
GTGCAATAATATGCTCGCAT+GGG 0.609249 tig0032326:-33697 None:intergenic
GGCATGCATGTGTGTCAACA+TGG 0.612865 tig0032326:+34640 Msa1448790:CDS
CCCTTGTCTATGGCAGACAA+AGG 0.613763 tig0032326:-32256 None:intergenic
GAACTACCTCCCGGGTTGAG+GGG 0.614332 tig0032326:+33288 Msa1448790:CDS
GATCAAGTCCCCATGAGACA+AGG 0.614765 tig0032326:+32109 Msa1448790:CDS
AATTACATATATTGATAACA+AGG 0.616446 tig0032326:+32059 Msa1448790:CDS
GCTAAGAATCTGTGGCGGAA+AGG 0.616612 tig0032326:+29120 Msa1448790:five_prime_UTR
CGATGATGCCGGTAGTGTTG+AGG 0.625130 tig0032326:+32017 Msa1448790:CDS
ACAGATTCTTAGCACAATTG+CGG 0.625719 tig0032326:-29110 None:intergenic
AAACCATTCACGGATTGTTG+GGG 0.626769 tig0032326:-29048 None:intergenic
TGAATGTAACCCCTCAACCC+GGG 0.629395 tig0032326:-33297 None:intergenic
TCTTTGGCAAACCAATCAGG+AGG 0.631246 tig0032326:+32549 Msa1448790:CDS
TTGCGGCGTGAAGTGAAGTG+AGG 0.632728 tig0032326:-29093 None:intergenic
TGGGTTGCATGACAACAAGT+GGG 0.633652 tig0032326:+33193 Msa1448790:CDS
TGTTGAAGAGAATATGCAGA+TGG 0.634807 tig0032326:+31785 Msa1448790:CDS
GTGAGTGTAAACCCGAGACT+CGG 0.636551 tig0032326:+32319 Msa1448790:CDS
AGGGGTTACATTCAGAAATG+GGG 0.639622 tig0032326:+33306 Msa1448790:CDS
TTGTTGTGATGATCTTCATG+TGG 0.640203 tig0032326:-34187 None:intergenic
TGCAACGCAGCATCTAACGT+TGG 0.642138 tig0032326:+33074 Msa1448790:CDS
GCAATTGTGCTAAGAATCTG+TGG 0.642795 tig0032326:+29112 Msa1448790:five_prime_UTR
ATTCTTCGCATGGACCTGAA+GGG 0.645936 tig0032326:+32087 Msa1448790:CDS
CAGAAGATGGAAACAAAGAG+GGG 0.647832 tig0032326:+33953 Msa1448790:CDS
AGACTCTGGTGGCACCTAGG+TGG 0.651025 tig0032326:+33753 Msa1448790:CDS
GTATGCAAAGAGAAAGATGT+GGG 0.653690 tig0032326:+33226 Msa1448790:CDS
ACTAGAAGGCTTGTCAGATG+GGG 0.659814 tig0032326:+31963 Msa1448790:CDS
TAATTACATGCGTTTCAAGG+AGG 0.673295 tig0032326:+33388 Msa1448790:CDS
AAGAGGGGTTTACATGATGG+CGG 0.673541 tig0032326:+33968 Msa1448790:CDS
CTTTGGCAAACCAATCAGGA+GGG 0.675668 tig0032326:+32550 Msa1448790:CDS
TGGGCCACAGCACACATACG+CGG 0.678201 tig0032326:+33245 Msa1448790:CDS
AAAGAACTATAGAATCGAGA+CGG 0.680829 tig0032326:-32531 None:intergenic
TGAATCTGTTGCATCTGTGG+AGG 0.686563 tig0032326:+31809 Msa1448790:CDS
AGAATTGCCGAAGACTCTGG+TGG 0.695739 tig0032326:+33742 Msa1448790:CDS
CCATAGACAAGGGTTTAGGG+AGG 0.704078 tig0032326:+32266 Msa1448790:CDS
TACATATATTGATAACAAGG+AGG 0.707799 tig0032326:+32062 Msa1448790:CDS
TACCTTCTCCATCAACAGTG+TGG 0.712985 tig0032326:-32710 None:intergenic
TAGGTGGACAAAGAATGCGA+AGG 0.720693 tig0032326:+33769 Msa1448790:CDS
TGTATGCAAAGAGAAAGATG+TGG 0.731423 tig0032326:+33225 Msa1448790:CDS
TGTAAACCCGAGACTCGGTG+TGG 0.731893 tig0032326:+32324 Msa1448790:CDS
ATGTAACCCCTCAACCCGGG+AGG 0.732309 tig0032326:-33294 None:intergenic
ATTGTGCTAAGAATCTGTGG+CGG 0.736573 tig0032326:+29115 Msa1448790:five_prime_UTR
ATTGCCGCGTATGTGTGCTG+TGG 0.739517 tig0032326:-33249 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAACAAATCTAATTTTAA+AGG - tig0032326:30927-30946 None:intergenic 10.0%
!! AAAACAAAATACAATAATAT+TGG - tig0032326:31906-31925 None:intergenic 10.0%
!!! ATATTATTGTATTTTGTTTT+TGG + tig0032326:31906-31925 Msa1448790:intron 10.0%
!!! GAAGAAATTAGTTAATTTTA+GGG - tig0032326:28897-28916 None:intergenic 15.0%
!!! AGAAGAAATTAGTTAATTTT+AGG - tig0032326:28898-28917 None:intergenic 15.0%
!!! ATCTAAAACAATAAATTACA+AGG - tig0032326:29321-29340 None:intergenic 15.0%
!! ATTTCATATTTAAAGAAAGT+TGG + tig0032326:29737-29756 Msa1448790:intron 15.0%
!! TAATAAAATTCATTTCTGTT+AGG + tig0032326:30399-30418 Msa1448790:intron 15.0%
!!! TAATTTTATTAAGCAAAACT+TGG + tig0032326:30998-31017 Msa1448790:intron 15.0%
!!! TTTTTGTTTTGAAAATAACA+TGG + tig0032326:31664-31683 Msa1448790:intron 15.0%
!! AGAAGAAAATACAATAATAT+TGG - tig0032326:31855-31874 None:intergenic 15.0%
!!! ATATTATTGTATTTTCTTCT+TGG + tig0032326:31855-31874 Msa1448790:intron 15.0%
!! ATCAATATATGTAATTTCTT+CGG - tig0032326:32055-32074 None:intergenic 15.0%
!!! AATTACATATATTGATAACA+AGG + tig0032326:32059-32078 Msa1448790:CDS 15.0%
!! TAAAAGATAATTATAACGAT+GGG - tig0032326:34281-34300 None:intergenic 15.0%
!! TTAAAAGATAATTATAACGA+TGG - tig0032326:34282-34301 None:intergenic 15.0%
!!! TTGTTTTTCAAAGAAAATTA+AGG - tig0032326:34474-34493 None:intergenic 15.0%
!!! TATTTATGTTTCTTTTGTTT+CGG + tig0032326:34602-34621 Msa1448790:intron 15.0%
!!! ACTTGATTTTCTAATTTTGA+TGG - tig0032326:28868-28887 None:intergenic 20.0%
!! TCATAAAATTAAACCATTCA+CGG - tig0032326:29061-29080 None:intergenic 20.0%
!!! TTTTTCCTTATCTTCAAATA+TGG + tig0032326:29193-29212 Msa1448790:intron 20.0%
!!! TTCAAATATGGTTTTGAATT+TGG + tig0032326:29205-29224 Msa1448790:intron 20.0%
!!! AATTTGGTTTTATAATGTGA+GGG + tig0032326:29221-29240 Msa1448790:intron 20.0%
!! CAGAAATTAAAACTAGAAAT+GGG - tig0032326:29279-29298 None:intergenic 20.0%
!! TCAGAAATTAAAACTAGAAA+TGG - tig0032326:29280-29299 None:intergenic 20.0%
!! AAAACTCTAACAAATTTCAA+AGG - tig0032326:29364-29383 None:intergenic 20.0%
!!! AATTTATTTTCTCATGAACT+AGG + tig0032326:29570-29589 Msa1448790:intron 20.0%
!! TCACTTTCACAATTTATTAA+TGG - tig0032326:30033-30052 None:intergenic 20.0%
!! TTTGTAACTTATCTCAATTT+AGG - tig0032326:30577-30596 None:intergenic 20.0%
!! AATTGAGATAAGTTACAAAT+AGG + tig0032326:30578-30597 Msa1448790:intron 20.0%
!! TAGACAAAGAAAAATATGAT+TGG - tig0032326:30737-30756 None:intergenic 20.0%
!! TGCGTTTAATAATAAATCTA+TGG - tig0032326:31523-31542 None:intergenic 20.0%
!! AAGATGATTAAAAGCAATAA+AGG + tig0032326:32216-32235 Msa1448790:CDS 20.0%
!! AGATGATTAAAAGCAATAAA+GGG + tig0032326:32217-32236 Msa1448790:CDS 20.0%
!! AAGGATATATATAATCAGAT+AGG + tig0032326:32597-32616 Msa1448790:CDS 20.0%
!! CAAATATAACGTTATGATTA+TGG - tig0032326:32872-32891 None:intergenic 20.0%
!! AATGAAGAATGCTATTAAAA+AGG + tig0032326:33007-33026 Msa1448790:CDS 20.0%
!! CAATTCACGTAAAAAATTTA+TGG - tig0032326:34898-34917 None:intergenic 20.0%
! CAAAACCATATTTGAAGATA+AGG - tig0032326:29201-29220 None:intergenic 25.0%
!!! GAATTTGGTTTTATAATGTG+AGG + tig0032326:29220-29239 Msa1448790:intron 25.0%
! TAAAACTAGAAATGGGTAAA+AGG - tig0032326:29272-29291 None:intergenic 25.0%
! GATTTAATAGACATTAGAGA+TGG - tig0032326:29452-29471 None:intergenic 25.0%
! TCATATTTAAAGAAAGTTGG+AGG + tig0032326:29740-29759 Msa1448790:intron 25.0%
!!! GTCCTTTATTTTTTTCTTTC+TGG + tig0032326:30301-30320 Msa1448790:intron 25.0%
! CACCAGAAAGAAAAAAATAA+AGG - tig0032326:30306-30325 None:intergenic 25.0%
! TATCTTTCTCTATGTTAACA+GGG + tig0032326:30326-30345 Msa1448790:intron 25.0%
!!! CTTATTTTCACCTATATTTC+TGG - tig0032326:30443-30462 None:intergenic 25.0%
! GGTGAAAATAAGAAGTTATA+TGG + tig0032326:30451-30470 Msa1448790:intron 25.0%
!! ATATTCATGCAACAAAGTTT+TGG - tig0032326:30686-30705 None:intergenic 25.0%
! GTAAAATGATGTGAGTATAA+TGG - tig0032326:30828-30847 None:intergenic 25.0%
! TGTTCAATAGTACTTATCTT+TGG - tig0032326:30856-30875 None:intergenic 25.0%
!!! TTTTTTCCTCATTGTTATCA+AGG - tig0032326:31082-31101 None:intergenic 25.0%
!! AATTATAGTGGAGGAAATAA+AGG - tig0032326:31465-31484 None:intergenic 25.0%
! AATAATAGGATCTTCAACAA+TGG - tig0032326:31491-31510 None:intergenic 25.0%
!!! CAAATGAAAGCATTTTGTTT+AGG - tig0032326:31569-31588 None:intergenic 25.0%
! AAACAAAATGCTTTCATTTG+TGG + tig0032326:31569-31588 Msa1448790:intron 25.0%
! AAACTGTATGTATATGACAA+TGG + tig0032326:31606-31625 Msa1448790:intron 25.0%
! TTGTTTGAACATATTTGAGA+TGG + tig0032326:31755-31774 Msa1448790:exon 25.0%
!! TACATATATTGATAACAAGG+AGG + tig0032326:32062-32081 Msa1448790:CDS 25.0%
!!! GAAATTTGAGTTTTCAAGTT+TGG + tig0032326:32131-32150 Msa1448790:CDS 25.0%
! GATGATTAAAAGCAATAAAG+GGG + tig0032326:32218-32237 Msa1448790:CDS 25.0%
! AATCATAACGTTATATTTGC+TGG + tig0032326:32873-32892 Msa1448790:CDS 25.0%
! AAAAAGAAGAAACTTATGTG+TGG + tig0032326:32913-32932 Msa1448790:CDS 25.0%
! AAAAGAAGAAACTTATGTGT+GGG + tig0032326:32914-32933 Msa1448790:CDS 25.0%
! ATGAAAATGTAGCAAAAAGT+CGG - tig0032326:33360-33379 None:intergenic 25.0%
!!! TATTGCACTATTGGTTTTTT+TGG + tig0032326:33712-33731 Msa1448790:CDS 25.0%
!! TTATGTGAATCCCAATATTT+TGG - tig0032326:33824-33843 None:intergenic 25.0%
! TGATGATTTCAATGATCATA+TGG + tig0032326:33910-33929 Msa1448790:CDS 25.0%
!!! TTTCTTTTGTTTCGGTTTTT+AGG + tig0032326:34610-34629 Msa1448790:intron 25.0%
TAAGGAAAAAGTAATCTCAC+CGG - tig0032326:29183-29202 None:intergenic 30.0%
!!! GTTTTAATTTCTGACCATGT+TGG + tig0032326:29286-29305 Msa1448790:intron 30.0%
AAGGCAAAAATGAACACAAA+AGG - tig0032326:29345-29364 None:intergenic 30.0%
!!! ATGGACAAATTTTTTTCCCA+AGG + tig0032326:29511-29530 Msa1448790:intron 30.0%
ACTATGTATTGCATCTTACA+TGG - tig0032326:29668-29687 None:intergenic 30.0%
!!! TTTTGGTTTTAGTTCAGCAA+TGG + tig0032326:29708-29727 Msa1448790:intron 30.0%
ATAGTCAATTCATCTCGTAA+AGG - tig0032326:29773-29792 None:intergenic 30.0%
! TGTATGGACATGATTTTTGT+GGG + tig0032326:29868-29887 Msa1448790:intron 30.0%
! ACAACTTCAATTTGAAGTGT+TGG + tig0032326:30112-30131 Msa1448790:intron 30.0%
GTATCTTTCTCTATGTTAAC+AGG + tig0032326:30325-30344 Msa1448790:intron 30.0%
TTAAATTCAAACTCTTGCAC+TGG + tig0032326:30782-30801 Msa1448790:intron 30.0%
TTTGCAAGAAAAAGAACAAG+AGG + tig0032326:31038-31057 Msa1448790:intron 30.0%
! AGAAAACCTTGATAACAATG+AGG + tig0032326:31073-31092 Msa1448790:intron 30.0%
AGGAAAAAAGACAGTAAACT+AGG + tig0032326:31093-31112 Msa1448790:intron 30.0%
CAACAATGGTGAAATTATAG+TGG - tig0032326:31477-31496 None:intergenic 30.0%
TATGGAAAGCGAGAAATAAT+AGG - tig0032326:31505-31524 None:intergenic 30.0%
!!! ATGAAAGCATTTTGTTTAGG+TGG - tig0032326:31566-31585 None:intergenic 30.0%
TCTATTGCCTACACATATTA+TGG - tig0032326:31693-31712 None:intergenic 30.0%
ATATGTGTAGGCAATAGAAA+AGG + tig0032326:31695-31714 Msa1448790:intron 30.0%
!!! TGAGTTTTCAAGTTTGGATA+TGG + tig0032326:32137-32156 Msa1448790:CDS 30.0%
! TTTTAATCATCTTGCTCTTG+CGG - tig0032326:32209-32228 None:intergenic 30.0%
ACATCGAAAAATGAAAGAGT+CGG + tig0032326:32467-32486 Msa1448790:CDS 30.0%
AAAGAACTATAGAATCGAGA+CGG - tig0032326:32534-32553 None:intergenic 30.0%
TAAATATCATTGTCCCTTAG+TGG + tig0032326:32827-32846 Msa1448790:CDS 30.0%
CACAATCTATGATAAGCATT+TGG - tig0032326:33038-33057 None:intergenic 30.0%
ATTATGATCTTGGTGAGTTT+CGG + tig0032326:33141-33160 Msa1448790:CDS 30.0%
! ACTGAAATGGTTGATACATT+TGG + tig0032326:33173-33192 Msa1448790:CDS 30.0%
! CTGAAATGGTTGATACATTT+GGG + tig0032326:33174-33193 Msa1448790:CDS 30.0%
!! GCTGACTTTTCTTCTAATTA+CGG + tig0032326:33416-33435 Msa1448790:CDS 30.0%
! TGAAATCTTGTTTGTAGTAC+CGG - tig0032326:33446-33465 None:intergenic 30.0%
ACAAACAAGATTTCAAAGCA+TGG + tig0032326:33451-33470 Msa1448790:CDS 30.0%
TATTTCGTGATATTCTTGCA+CGG + tig0032326:33516-33535 Msa1448790:CDS 30.0%
ATAAGCCTCTTCCAAAATAT+TGG + tig0032326:33810-33829 Msa1448790:CDS 30.0%
TAAGCCTCTTCCAAAATATT+GGG + tig0032326:33811-33830 Msa1448790:CDS 30.0%
TGTTCTACTTGTAGAGAATT+CGG + tig0032326:34109-34128 Msa1448790:CDS 30.0%
ATGCCTATACTGTGATATAT+AGG + tig0032326:34432-34451 Msa1448790:intron 30.0%
TGCCTATACTGTGATATATA+GGG + tig0032326:34433-34452 Msa1448790:intron 30.0%
TCAACAAATTCTCTGATGAT+TGG - tig0032326:34680-34699 None:intergenic 30.0%
!! TCATCAGAGAATTTGTTGAA+TGG + tig0032326:34681-34700 Msa1448790:CDS 30.0%
TTACCTATTATGTTGAGCTT+TGG + tig0032326:34846-34865 Msa1448790:three_prime_UTR 30.0%
TACGTGAATTGTTGCTAAAT+AGG + tig0032326:34907-34926 Msa1448790:three_prime_UTR 30.0%
TCTTTATGCTTGTCATCTAA+AGG + tig0032326:34933-34952 Msa1448790:three_prime_UTR 30.0%
TATTCGTGTTGAACAAAGTT+CGG - tig0032326:34980-34999 None:intergenic 30.0%
!! CTAAGAGTGGTAACTGATTT+TGG - tig0032326:28838-28857 None:intergenic 35.0%
!!! TTCTGATTTTGACTGAAAGG+GGG - tig0032326:28974-28993 None:intergenic 35.0%
!!! CTTCTGATTTTGACTGAAAG+GGG - tig0032326:28975-28994 None:intergenic 35.0%
!!! CCTTCTGATTTTGACTGAAA+GGG - tig0032326:28976-28995 None:intergenic 35.0%
!!! ACCTTCTGATTTTGACTGAA+AGG - tig0032326:28977-28996 None:intergenic 35.0%
! TAAACCATTCACGGATTGTT+GGG - tig0032326:29052-29071 None:intergenic 35.0%
! TTAAACCATTCACGGATTGT+TGG - tig0032326:29053-29072 None:intergenic 35.0%
ACAGATTCTTAGCACAATTG+CGG - tig0032326:29113-29132 None:intergenic 35.0%
!! GTTCCATTTTTCTTTCTCGT+TGG + tig0032326:29154-29173 Msa1448790:five_prime_UTR 35.0%
!!! TTTCTGACCATGTTGGTTTT+TGG + tig0032326:29293-29312 Msa1448790:intron 35.0%
ACGAACCTAATCCAATGTAA+CGG - tig0032326:29396-29415 None:intergenic 35.0%
ACAAACATGAGTTGTAGTCA+TGG - tig0032326:29538-29557 None:intergenic 35.0%
! CATAGTGTTGTTGTTACTTG+TGG + tig0032326:29682-29701 Msa1448790:intron 35.0%
!!! GTTTTAGTTCAGCAATGGAA+AGG + tig0032326:29713-29732 Msa1448790:intron 35.0%
! CTGTATGGACATGATTTTTG+TGG + tig0032326:29867-29886 Msa1448790:intron 35.0%
! ATGATTTTTGTGGGACTTCA+AGG + tig0032326:29877-29896 Msa1448790:intron 35.0%
! TGATTTTTGTGGGACTTCAA+GGG + tig0032326:29878-29897 Msa1448790:intron 35.0%
AAATACCATCCACAAACCAT+TGG - tig0032326:29943-29962 None:intergenic 35.0%
!!! GTGTTCCTTTAGCTTTTTAG+AGG + tig0032326:30245-30264 Msa1448790:intron 35.0%
! CAACACCTCTAAAAAGCTAA+AGG - tig0032326:30253-30272 None:intergenic 35.0%
!!! CTTTAGCTTTTTAGAGGTGT+TGG + tig0032326:30251-30270 Msa1448790:intron 35.0%
CACTAAAGAGCCAGAAATAT+AGG + tig0032326:30430-30449 Msa1448790:intron 35.0%
ACAAAGTGCATTGTGATGTA+TGG - tig0032326:30494-30513 None:intergenic 35.0%
TGCATGAGTAACTTTCTGTT+GGG + tig0032326:30607-30626 Msa1448790:intron 35.0%
! GTTCTTTTTCTTGCAAACTG+TGG - tig0032326:31035-31054 None:intergenic 35.0%
!! TAAGAGTGTGGAGTTCTTTT+GGG - tig0032326:31126-31145 None:intergenic 35.0%
!! TTAAGAGTGTGGAGTTCTTT+TGG - tig0032326:31127-31146 None:intergenic 35.0%
GTGTTAGTAACTTAAGAGTG+TGG - tig0032326:31138-31157 None:intergenic 35.0%
!! GTGTTATTTATGTCTGTGTG+TGG - tig0032326:31169-31188 None:intergenic 35.0%
!!! CTTAGATTTTGGTGCTATCT+AGG - tig0032326:31209-31228 None:intergenic 35.0%
TCACCGCATAAAACATCTAA+CGG + tig0032326:31245-31264 Msa1448790:intron 35.0%
!!! TGTTTTTTAGGTGCTGTTTG+GGG - tig0032326:31322-31341 None:intergenic 35.0%
!!! GTGTTTTTTAGGTGCTGTTT+GGG - tig0032326:31323-31342 None:intergenic 35.0%
!!! TGTGTTTTTTAGGTGCTGTT+TGG - tig0032326:31324-31343 None:intergenic 35.0%
!!! TGCTTTTGGTGTTAAAAAGG+TGG - tig0032326:31362-31381 None:intergenic 35.0%
!!! GACTGCTTTTGGTGTTAAAA+AGG - tig0032326:31365-31384 None:intergenic 35.0%
AAATAAAGGTCGTATCTTGG+CGG - tig0032326:31451-31470 None:intergenic 35.0%
AGGAAATAAAGGTCGTATCT+TGG - tig0032326:31454-31473 None:intergenic 35.0%
CAATGGTGAAATTATAGTGG+AGG - tig0032326:31474-31493 None:intergenic 35.0%
AAATGCTTTCATTTGTGGAG+TGG + tig0032326:31574-31593 Msa1448790:intron 35.0%
AATGCTTTCATTTGTGGAGT+GGG + tig0032326:31575-31594 Msa1448790:intron 35.0%
ATGGATGCCATAATATGTGT+AGG + tig0032326:31683-31702 Msa1448790:intron 35.0%
TGTTGAAGAGAATATGCAGA+TGG + tig0032326:31785-31804 Msa1448790:CDS 35.0%
!!! TTTTGCAGCTTTGTTTGTTG+TGG + tig0032326:31935-31954 Msa1448790:intron 35.0%
TCAAATTTCCTTGTCTCATG+GGG - tig0032326:32120-32139 None:intergenic 35.0%
CTCAAATTTCCTTGTCTCAT+GGG - tig0032326:32121-32140 None:intergenic 35.0%
ACTCAAATTTCCTTGTCTCA+TGG - tig0032326:32122-32141 None:intergenic 35.0%
TGGCTTATGAGTTCTATAAC+TGG + tig0032326:32157-32176 Msa1448790:CDS 35.0%
AACTGGTATGCTAGAATGAA+TGG + tig0032326:32174-32193 Msa1448790:CDS 35.0%
ACTGGTATGCTAGAATGAAT+GGG + tig0032326:32175-32194 Msa1448790:CDS 35.0%
GTGGATGTGAAGCAAAATTT+CGG + tig0032326:32343-32362 Msa1448790:CDS 35.0%
TGGATGTGAAGCAAAATTTC+GGG + tig0032326:32344-32363 Msa1448790:CDS 35.0%
TAGATATGTTCTCACAACGT+TGG + tig0032326:32373-32392 Msa1448790:CDS 35.0%
!! CTTTTAGGTGAAGAGTACAA+TGG + tig0032326:32432-32451 Msa1448790:CDS 35.0%
GTCTCGATTCTATAGTTCTT+TGG + tig0032326:32533-32552 Msa1448790:CDS 35.0%
AAAGATAGGGTTTCGAAAGA+AGG + tig0032326:32578-32597 Msa1448790:CDS 35.0%
!! GAAAGCAACGCCTTTTAAAA+CGG + tig0032326:32619-32638 Msa1448790:CDS 35.0%
!! TACCATCACACCGTTTTAAA+AGG - tig0032326:32632-32651 None:intergenic 35.0%
AATGCTCTACAATATCTTCG+TGG + tig0032326:32654-32673 Msa1448790:CDS 35.0%
ATGCTCTACAATATCTTCGT+GGG + tig0032326:32655-32674 Msa1448790:CDS 35.0%
TTGGCATTTGATGCAACATA+TGG + tig0032326:32798-32817 Msa1448790:CDS 35.0%
! GTGGGTTCTTGAACAATTTT+TGG + tig0032326:32932-32951 Msa1448790:CDS 35.0%
!! CAATTTTTGGAAGCAATGTC+TGG + tig0032326:32945-32964 Msa1448790:CDS 35.0%
CCATCAGTAATGACAGATAT+AGG - tig0032326:32978-32997 None:intergenic 35.0%
CCTATATCTGTCATTACTGA+TGG + tig0032326:32975-32994 Msa1448790:CDS 35.0%
CTTATCATAGATTGTGTGCT+TGG + tig0032326:33042-33061 Msa1448790:CDS 35.0%
ATGTTGGGTGATTATGATCT+TGG + tig0032326:33131-33150 Msa1448790:CDS 35.0%
TGTATGCAAAGAGAAAGATG+TGG + tig0032326:33225-33244 Msa1448790:CDS 35.0%
GTATGCAAAGAGAAAGATGT+GGG + tig0032326:33226-33245 Msa1448790:CDS 35.0%
CCTTGAAACGCATGTAATTA+AGG - tig0032326:33388-33407 None:intergenic 35.0%
CCTTAATTACATGCGTTTCA+AGG + tig0032326:33385-33404 Msa1448790:CDS 35.0%
TAATTACATGCGTTTCAAGG+AGG + tig0032326:33388-33407 Msa1448790:CDS 35.0%
TTCTTCTAATTACGGTGATC+CGG + tig0032326:33424-33443 Msa1448790:CDS 35.0%
GTAAGTACCAAGCATCTAAA+CGG + tig0032326:33600-33619 Msa1448790:CDS 35.0%
TAAGTACCAAGCATCTAAAC+GGG + tig0032326:33601-33620 Msa1448790:CDS 35.0%
CGAGCATATTATTGCACTAT+TGG + tig0032326:33703-33722 Msa1448790:CDS 35.0%
!! GAATCCCAATATTTTGGAAG+AGG - tig0032326:33818-33837 None:intergenic 35.0%
TTTCAATGATCATATGGAGC+AGG + tig0032326:33916-33935 Msa1448790:CDS 35.0%
TTCAGAAGATGGAAACAAAG+AGG + tig0032326:33951-33970 Msa1448790:CDS 35.0%
TCAGAAGATGGAAACAAAGA+GGG + tig0032326:33952-33971 Msa1448790:CDS 35.0%
AAAGTGACCATGAGATATTG+AGG + tig0032326:34008-34027 Msa1448790:CDS 35.0%
AAGTGACCATGAGATATTGA+GGG + tig0032326:34009-34028 Msa1448790:CDS 35.0%
TTGTTGTGATGATCTTCATG+TGG - tig0032326:34190-34209 None:intergenic 35.0%
! AACTGCAATTTTACCTCACA+AGG - tig0032326:34377-34396 None:intergenic 35.0%
GACCCTATATATCACAGTAT+AGG - tig0032326:34438-34457 None:intergenic 35.0%
ACATAGCAATTTGTAGCATC+AGG + tig0032326:34518-34537 Msa1448790:intron 35.0%
AGAGAATCACTTTGAATTGC+AGG - tig0032326:34579-34598 None:intergenic 35.0%
!!! TTTCGGTTTTTAGGTTGATG+AGG + tig0032326:34619-34638 Msa1448790:intron 35.0%
AGAAATAGCAACTAGAGAAG+AGG + tig0032326:34723-34742 Msa1448790:exon 35.0%
AGTCCAAAGCTCAACATAAT+AGG - tig0032326:34852-34871 None:intergenic 35.0%
GGAGAGGAAACTGATTATTG+AGG - tig0032326:28817-28836 None:intergenic 40.0%
!! AGTGGTAACTGATTTTGGAG+AGG - tig0032326:28833-28852 None:intergenic 40.0%
TGATGGTTTGAGTCTAAGAG+TGG - tig0032326:28851-28870 None:intergenic 40.0%
CCCTTTCAGTCAAAATCAGA+AGG + tig0032326:28973-28992 Msa1448790:five_prime_UTR 40.0%
! AAACCATTCACGGATTGTTG+GGG - tig0032326:29051-29070 None:intergenic 40.0%
GCAATTGTGCTAAGAATCTG+TGG + tig0032326:29112-29131 Msa1448790:five_prime_UTR 40.0%
ATTGTGCTAAGAATCTGTGG+CGG + tig0032326:29115-29134 Msa1448790:five_prime_UTR 40.0%
TGGCCAACGAGAAAGAAAAA+TGG - tig0032326:29160-29179 None:intergenic 40.0%
CAAGGAACCAAAAACCAACA+TGG - tig0032326:29303-29322 None:intergenic 40.0%
TTTGCTTCAGACCGTTACAT+TGG + tig0032326:29382-29401 Msa1448790:intron 40.0%
TCAGACCGTTACATTGGATT+AGG + tig0032326:29388-29407 Msa1448790:intron 40.0%
! CATTGGATTAGGTTCGTGAA+AGG + tig0032326:29399-29418 Msa1448790:intron 40.0%
!! CACTGTTCACGTTTGTTGTA+TGG + tig0032326:29492-29511 Msa1448790:intron 40.0%
!! GTTGTTACTTGTGGCTGTTT+TGG + tig0032326:29691-29710 Msa1448790:intron 40.0%
TTGATTGATTGAGCAGCCAA+TGG + tig0032326:29924-29943 Msa1448790:intron 40.0%
TGTTAACAGGGTGAATGCAT+TGG + tig0032326:30338-30357 Msa1448790:intron 40.0%
CTGAGATGAGTCTGTATATG+AGG - tig0032326:30539-30558 None:intergenic 40.0%
GTGCATGAGTAACTTTCTGT+TGG + tig0032326:30606-30625 Msa1448790:intron 40.0%
TTCTGTTGGGTCAAAGTTAG+AGG + tig0032326:30620-30639 Msa1448790:intron 40.0%
!! AATATCACTGACTCGTTGCA+TGG + tig0032326:30701-30720 Msa1448790:intron 40.0%
!! AAGAGTGTGGAGTTCTTTTG+GGG - tig0032326:31125-31144 None:intergenic 40.0%
!!! GATTTTGGTGCTATCTAGGT+GGG - tig0032326:31205-31224 None:intergenic 40.0%
!!! AGATTTTGGTGCTATCTAGG+TGG - tig0032326:31206-31225 None:intergenic 40.0%
! GGACTTAGAGGCTTAGATTT+TGG - tig0032326:31220-31239 None:intergenic 40.0%
! ATGTTTTATGCGGTGACAGT+AGG - tig0032326:31241-31260 None:intergenic 40.0%
! CTGCCGTTAGATGTTTTATG+CGG - tig0032326:31251-31270 None:intergenic 40.0%
TGTTTACATTTCAGGAGGTG+CGG - tig0032326:31298-31317 None:intergenic 40.0%
! TTTGGGGCTGTTTACATTTC+AGG - tig0032326:31306-31325 None:intergenic 40.0%
AGCACCTAAAAAACACAGAC+CGG + tig0032326:31327-31346 Msa1448790:intron 40.0%
TAACACCAAAAGCAGTCCTT+CGG + tig0032326:31368-31387 Msa1448790:intron 40.0%
GTTTGTTCTACGAATGGTGT+TGG - tig0032326:31397-31416 None:intergenic 40.0%
! TGCTAGAATGAATGGGTTTG+CGG + tig0032326:32182-32201 Msa1448790:CDS 40.0%
! AAGCTCATGGTTGTGTTGAT+CGG - tig0032326:32415-32434 None:intergenic 40.0%
! CAACACAACCATGAGCTTTT+AGG + tig0032326:32417-32436 Msa1448790:CDS 40.0%
ACTCTTCACCTAAAAGCTCA+TGG - tig0032326:32428-32447 None:intergenic 40.0%
ATGAACGACATGTTGAAGGT+TGG + tig0032326:32501-32520 Msa1448790:CDS 40.0%
TGAACGACATGTTGAAGGTT+GGG + tig0032326:32502-32521 Msa1448790:CDS 40.0%
ACATGTTGAAGGTTGGGATA+GGG + tig0032326:32508-32527 Msa1448790:CDS 40.0%
AGTTCTTTGGCAAACCAATC+AGG + tig0032326:32546-32565 Msa1448790:CDS 40.0%
! TCTTTTCATACCCTCCTGAT+TGG - tig0032326:32563-32582 None:intergenic 40.0%
! TCAGGAGGGTATGAAAAGAT+AGG + tig0032326:32564-32583 Msa1448790:CDS 40.0%
! CAGGAGGGTATGAAAAGATA+GGG + tig0032326:32565-32584 Msa1448790:CDS 40.0%
! TTTTATCGCCACACTGTTGA+TGG + tig0032326:32702-32721 Msa1448790:CDS 40.0%
! GTAGACTTGAACACCTGTTT+TGG + tig0032326:32730-32749 Msa1448790:CDS 40.0%
TAATACCGTCACACCAAAAC+AGG - tig0032326:32746-32765 None:intergenic 40.0%
GTTGGAATTCCTGAGTTTGT+GGG + tig0032326:33092-33111 Msa1448790:CDS 40.0%
!!! ATACGCGGCAATTTTTTTGC+TGG + tig0032326:33260-33279 Msa1448790:CDS 40.0%
!!! TACGCGGCAATTTTTTTGCT+GGG + tig0032326:33261-33280 Msa1448790:CDS 40.0%
TGAGGGGTTACATTCAGAAA+TGG + tig0032326:33304-33323 Msa1448790:CDS 40.0%
GAGGGGTTACATTCAGAAAT+GGG + tig0032326:33305-33324 Msa1448790:CDS 40.0%
AGGGGTTACATTCAGAAATG+GGG + tig0032326:33306-33325 Msa1448790:CDS 40.0%
CACTTGAACACATCATCATC+TGG - tig0032326:33647-33666 None:intergenic 40.0%
CAAGTGTTCTTGCAAGAAGA+TGG + tig0032326:33661-33680 Msa1448790:CDS 40.0%
TGCAAGAAGATGGAGTCATT+TGG + tig0032326:33671-33690 Msa1448790:CDS 40.0%
GTGCAATAATATGCTCGCAT+GGG - tig0032326:33700-33719 None:intergenic 40.0%
AGTGCAATAATATGCTCGCA+TGG - tig0032326:33701-33720 None:intergenic 40.0%
AGCAAATTAGCAAGTGAGAG+TGG + tig0032326:33887-33906 Msa1448790:CDS 40.0%
TGCTGCTGATATTCAGAAGA+TGG + tig0032326:33940-33959 Msa1448790:CDS 40.0%
CAGAAGATGGAAACAAAGAG+GGG + tig0032326:33953-33972 Msa1448790:CDS 40.0%
ACAAAGAGGGGTTTACATGA+TGG + tig0032326:33965-33984 Msa1448790:CDS 40.0%
!! GTCACTTTGACTTGAATCAG+TGG - tig0032326:33996-34015 None:intergenic 40.0%
GCACATCCTTTACTTCTTAC+CGG - tig0032326:34043-34062 None:intergenic 40.0%
! CTTTAGCTTCGTCACTTACT+CGG + tig0032326:34065-34084 Msa1448790:CDS 40.0%
TTAGCATGATGTCGACGTAT+TGG - tig0032326:34154-34173 None:intergenic 40.0%
!! CTGATGATTGGTCTCTTGAA+AGG - tig0032326:34668-34687 None:intergenic 40.0%
TGACTGAAAGGGGGAAATTG+CGG - tig0032326:28965-28984 None:intergenic 45.0%
! TTTTCTTTCTCGTTGGCCAC+CGG + tig0032326:29161-29180 Msa1448790:five_prime_UTR 45.0%
GGAAAAAGTAATCTCACCGG+TGG - tig0032326:29180-29199 None:intergenic 45.0%
GAGAGATCGAGCACGAAATT+GGG + tig0032326:29243-29262 Msa1448790:intron 45.0%
GAGTTGTAGTCATGGACCTT+GGG - tig0032326:29530-29549 None:intergenic 45.0%
TGAGTTGTAGTCATGGACCT+TGG - tig0032326:29531-29550 None:intergenic 45.0%
ACACACACACACACACTGTA+TGG + tig0032326:29852-29871 Msa1448790:intron 45.0%
ATTGAGCAGCCAATGGTTTG+TGG + tig0032326:29931-29950 Msa1448790:intron 45.0%
CAGAATCATGTCCTTCGCAT+GGG + tig0032326:30200-30219 Msa1448790:intron 45.0%
! TCCTTCGCATGGGAGTTTTT+CGG + tig0032326:30210-30229 Msa1448790:intron 45.0%
TGTTGGGTCAAAGTTAGAGG+AGG + tig0032326:30623-30642 Msa1448790:intron 45.0%
! GTTTACATTTCAGGAGGTGC+GGG - tig0032326:31297-31316 None:intergenic 45.0%
!!! CAAGCCGGTCTGTGTTTTTT+AGG - tig0032326:31334-31353 None:intergenic 45.0%
AAAAAGGTGGAGACACAAGC+CGG - tig0032326:31349-31368 None:intergenic 45.0%
GGATGAATCTGTTGCATCTG+TGG + tig0032326:31806-31825 Msa1448790:CDS 45.0%
TGAATCTGTTGCATCTGTGG+AGG + tig0032326:31809-31828 Msa1448790:CDS 45.0%
!! CAGCTTTGTTTGTTGTGGCA+GGG + tig0032326:31940-31959 Msa1448790:intron 45.0%
GACTAGAAGGCTTGTCAGAT+GGG + tig0032326:31962-31981 Msa1448790:CDS 45.0%
ACTAGAAGGCTTGTCAGATG+GGG + tig0032326:31963-31982 Msa1448790:CDS 45.0%
CAAGGAGGATATTCTTCGCA+TGG + tig0032326:32077-32096 Msa1448790:CDS 45.0%
TATTCTTCGCATGGACCTGA+AGG + tig0032326:32086-32105 Msa1448790:CDS 45.0%
ATTCTTCGCATGGACCTGAA+GGG + tig0032326:32087-32106 Msa1448790:CDS 45.0%
ACCTTTGTCTGCCATAGACA+AGG + tig0032326:32255-32274 Msa1448790:CDS 45.0%
CCTTTGTCTGCCATAGACAA+GGG + tig0032326:32256-32275 Msa1448790:CDS 45.0%
TCTGCCATAGACAAGGGTTT+AGG + tig0032326:32262-32281 Msa1448790:CDS 45.0%
CTGCCATAGACAAGGGTTTA+GGG + tig0032326:32263-32282 Msa1448790:CDS 45.0%
GCAGATGAACGACATGTTGA+AGG + tig0032326:32497-32516 Msa1448790:CDS 45.0%
GACATGTTGAAGGTTGGGAT+AGG + tig0032326:32507-32526 Msa1448790:CDS 45.0%
TCTTTGGCAAACCAATCAGG+AGG + tig0032326:32549-32568 Msa1448790:CDS 45.0%
CTTTGGCAAACCAATCAGGA+GGG + tig0032326:32550-32569 Msa1448790:CDS 45.0%
!!! CGCCTTTTAAAACGGTGTGA+TGG + tig0032326:32627-32646 Msa1448790:CDS 45.0%
TCTACAATATCTTCGTGGGC+TGG + tig0032326:32659-32678 Msa1448790:CDS 45.0%
TACCTTCTCCATCAACAGTG+TGG - tig0032326:32713-32732 None:intergenic 45.0%
!!! GAACACCTGTTTTGGTGTGA+CGG + tig0032326:32738-32757 Msa1448790:CDS 45.0%
! TGTCCCTTAGTGGTGTTTTC+TGG + tig0032326:32837-32856 Msa1448790:CDS 45.0%
ACGCCAGAAAACACCACTAA+GGG - tig0032326:32843-32862 None:intergenic 45.0%
AACGCCAGAAAACACCACTA+AGG - tig0032326:32844-32863 None:intergenic 45.0%
CGTTGGAATTCCTGAGTTTG+TGG + tig0032326:33091-33110 Msa1448790:CDS 45.0%
GAATTCCTGAGTTTGTGGGT+CGG + tig0032326:33096-33115 Msa1448790:CDS 45.0%
TCGGTTCAGGATATGCATGT+TGG + tig0032326:33115-33134 Msa1448790:CDS 45.0%
CGGTTCAGGATATGCATGTT+GGG + tig0032326:33116-33135 Msa1448790:CDS 45.0%
! TTGGGTTGCATGACAACAAG+TGG + tig0032326:33192-33211 Msa1448790:CDS 45.0%
TGGGTTGCATGACAACAAGT+GGG + tig0032326:33193-33212 Msa1448790:CDS 45.0%
CAATAATATGCTCGCATGGG+AGG - tig0032326:33697-33716 None:intergenic 45.0%
TTCGCATTCTTTGTCCACCT+AGG - tig0032326:33770-33789 None:intergenic 45.0%
TAGGTGGACAAAGAATGCGA+AGG + tig0032326:33769-33788 Msa1448790:CDS 45.0%
AAGAGGGGTTTACATGATGG+CGG + tig0032326:33968-33987 Msa1448790:CDS 45.0%
CAGGATCCCTCAATATCTCA+TGG - tig0032326:34018-34037 None:intergenic 45.0%
CGTCACTTACTCGGAAGAAA+AGG + tig0032326:34074-34093 Msa1448790:CDS 45.0%
GGAAGAAAAGGAAGCGAACT+CGG + tig0032326:34086-34105 Msa1448790:CDS 45.0%
GAAAAGTGATGCACCTTGTG+AGG + tig0032326:34361-34380 Msa1448790:intron 45.0%
ACTTTGAATTGCAGGCGATG+TGG - tig0032326:34571-34590 None:intergenic 45.0%
TGGCAGTTTCTCAAAGTCAC+AGG - tig0032326:34878-34897 None:intergenic 45.0%
CTACCCCAACAATCCGTGAA+TGG + tig0032326:29045-29064 Msa1448790:five_prime_UTR 50.0%
! GCTAAGAATCTGTGGCGGAA+AGG + tig0032326:29120-29139 Msa1448790:five_prime_UTR 50.0%
GGAGAGATCGAGCACGAAAT+TGG + tig0032326:29242-29261 Msa1448790:intron 50.0%
! AGCAGCCAATGGTTTGTGGA+TGG + tig0032326:29935-29954 Msa1448790:intron 50.0%
!! AGTGTCGACATCGACACACA+TGG - tig0032326:30071-30090 None:intergenic 50.0%
GCAGAATCATGTCCTTCGCA+TGG + tig0032326:30199-30218 Msa1448790:intron 50.0%
! CCTTCGCATGGGAGTTTTTC+GGG + tig0032326:30211-30230 Msa1448790:intron 50.0%
! CTGACTCGTTGCATGGCTAA+TGG + tig0032326:30708-30727 Msa1448790:intron 50.0%
GAGGGAGGTAGTAATTGTGG+AGG - tig0032326:31275-31294 None:intergenic 50.0%
GGGGCTGTTTACATTTCAGG+AGG - tig0032326:31303-31322 None:intergenic 50.0%
! GGAATCCGAAGGACTGCTTT+TGG - tig0032326:31376-31395 None:intergenic 50.0%
! CGAATGGTGTTGGAATCCGA+AGG - tig0032326:31387-31406 None:intergenic 50.0%
AGGCGCGTTTGTTCTACGAA+TGG - tig0032326:31403-31422 None:intergenic 50.0%
TCTAACTCGGCTGAAGACTC+AGG - tig0032326:31423-31442 None:intergenic 50.0%
AAAGGTCGTATCTTGGCGGT+GGG - tig0032326:31447-31466 None:intergenic 50.0%
TAAAGGTCGTATCTTGGCGG+TGG - tig0032326:31448-31467 None:intergenic 50.0%
!! GCAGCTTTGTTTGTTGTGGC+AGG + tig0032326:31939-31958 Msa1448790:intron 50.0%
TTGTTGTGGCAGGGACTAGA+AGG + tig0032326:31949-31968 Msa1448790:intron 50.0%
GGACTAGAAGGCTTGTCAGA+TGG + tig0032326:31961-31980 Msa1448790:CDS 50.0%
GAGACTGTTGACGATGATGC+CGG + tig0032326:32006-32025 Msa1448790:CDS 50.0%
GATCAAGTCCCCATGAGACA+AGG + tig0032326:32109-32128 Msa1448790:CDS 50.0%
CCCTTGTCTATGGCAGACAA+AGG - tig0032326:32259-32278 None:intergenic 50.0%
CCTCCCTAAACCCTTGTCTA+TGG - tig0032326:32269-32288 None:intergenic 50.0%
CCATAGACAAGGGTTTAGGG+AGG + tig0032326:32266-32285 Msa1448790:CDS 50.0%
CAAGGGTTTAGGGAGGATAG+AGG + tig0032326:32273-32292 Msa1448790:CDS 50.0%
CGGGTTTACACTCACGCTTA+CGG - tig0032326:32314-32333 None:intergenic 50.0%
GTGAGTGTAAACCCGAGACT+CGG + tig0032326:32319-32338 Msa1448790:CDS 50.0%
TTCACATCCACACCGAGTCT+CGG - tig0032326:32334-32353 None:intergenic 50.0%
GTGTGACGGTATTAGCCAGT+TGG + tig0032326:32752-32771 Msa1448790:CDS 50.0%
TGCAACGCAGCATCTAACGT+TGG + tig0032326:33074-33093 Msa1448790:CDS 50.0%
TGAATGTAACCCCTCAACCC+GGG - tig0032326:33300-33319 None:intergenic 50.0%
CTGAATGTAACCCCTCAACC+CGG - tig0032326:33301-33320 None:intergenic 50.0%
TCTTGCACGGTCTGCAGATA+TGG + tig0032326:33529-33548 Msa1448790:CDS 50.0%
ACCAAGCATCTAAACGGGAG+TGG + tig0032326:33606-33625 Msa1448790:CDS 50.0%
TCCACTCCCGTTTAGATGCT+TGG - tig0032326:33610-33629 None:intergenic 50.0%
TGCAGAATTGCCGAAGACTC+TGG + tig0032326:33739-33758 Msa1448790:CDS 50.0%
AGAATTGCCGAAGACTCTGG+TGG + tig0032326:33742-33761 Msa1448790:CDS 50.0%
GATATTGAGGGATCCTGCTC+CGG + tig0032326:34021-34040 Msa1448790:CDS 50.0%
CCTTTACTTCTTACCGGAGC+AGG - tig0032326:34037-34056 None:intergenic 50.0%
CCTGCTCCGGTAAGAAGTAA+AGG + tig0032326:34034-34053 Msa1448790:CDS 50.0%
GGCATGCATGTGTGTCAACA+TGG + tig0032326:34640-34659 Msa1448790:CDS 50.0%
TGCGGCGTGAAGTGAAGTGA+GGG - tig0032326:29095-29114 None:intergenic 55.0%
TTGCGGCGTGAAGTGAAGTG+AGG - tig0032326:29096-29115 None:intergenic 55.0%
CCCGAAAAACTCCCATGCGA+AGG - tig0032326:30214-30233 None:intergenic 55.0%
!! CTATCTAGGTGGGCTAGTGG+TGG - tig0032326:31195-31214 None:intergenic 55.0%
!! GTGCTATCTAGGTGGGCTAG+TGG - tig0032326:31198-31217 None:intergenic 55.0%
GCGGTGACAGTAGGACTTAG+AGG - tig0032326:31232-31251 None:intergenic 55.0%
CGGGAGGGAGGTAGTAATTG+TGG - tig0032326:31278-31297 None:intergenic 55.0%
! ACATTTCAGGAGGTGCGGGA+GGG - tig0032326:31293-31312 None:intergenic 55.0%
! TACATTTCAGGAGGTGCGGG+AGG - tig0032326:31294-31313 None:intergenic 55.0%
AAGGTCGTATCTTGGCGGTG+GGG - tig0032326:31446-31465 None:intergenic 55.0%
CGATGATGCCGGTAGTGTTG+AGG + tig0032326:32017-32036 Msa1448790:CDS 55.0%
! ATGCCGGTAGTGTTGAGGCT+GGG + tig0032326:32022-32041 Msa1448790:CDS 55.0%
TTCCCCAGCCTCAACACTAC+CGG - tig0032326:32028-32047 None:intergenic 55.0%
CATGGGGACTTGATCCCTTC+AGG - tig0032326:32104-32123 None:intergenic 55.0%
!! TGTAAACCCGAGACTCGGTG+TGG + tig0032326:32324-32343 Msa1448790:CDS 55.0%
TCACATCCACACCGAGTCTC+GGG - tig0032326:32333-32352 None:intergenic 55.0%
! CGCCACACTGTTGATGGAGA+AGG + tig0032326:32708-32727 Msa1448790:CDS 55.0%
CTGAACCGACCCACAAACTC+AGG - tig0032326:33104-33123 None:intergenic 55.0%
! CTGAGTTTGTGGGTCGGTTC+AGG + tig0032326:33102-33121 Msa1448790:CDS 55.0%
TTGGTGAGTTTCGGCGCAAG+TGG + tig0032326:33150-33169 Msa1448790:CDS 55.0%
!! TCGGCGCAAGTGGACTGAAA+TGG + tig0032326:33160-33179 Msa1448790:CDS 55.0%
ATTGCCGCGTATGTGTGCTG+TGG - tig0032326:33252-33271 None:intergenic 55.0%
CTGGGTTCAGAACTACCTCC+CGG + tig0032326:33279-33298 Msa1448790:CDS 55.0%
TGGGTTCAGAACTACCTCCC+GGG + tig0032326:33280-33299 Msa1448790:CDS 55.0%
! AGAACTACCTCCCGGGTTGA+GGG + tig0032326:33287-33306 Msa1448790:CDS 55.0%
!! CAAAGCATGGAGCGTTGTGC+TGG + tig0032326:33464-33483 Msa1448790:CDS 55.0%
! CTAGGTGCCACCAGAGTCTT+CGG - tig0032326:33752-33771 None:intergenic 55.0%
CTTGGCGGTGGGGTCTAACT+CGG - tig0032326:31436-31455 None:intergenic 60.0%
! GATGCCGGTAGTGTTGAGGC+TGG + tig0032326:32021-32040 Msa1448790:CDS 60.0%
! TGCCGGTAGTGTTGAGGCTG+GGG + tig0032326:32023-32042 Msa1448790:CDS 60.0%
! GGTAGTGTTGAGGCTGGGGA+AGG + tig0032326:32027-32046 Msa1448790:CDS 60.0%
TGGGCCACAGCACACATACG+CGG + tig0032326:33245-33264 Msa1448790:CDS 60.0%
CAGAACTACCTCCCGGGTTG+AGG + tig0032326:33286-33305 Msa1448790:CDS 60.0%
! GAACTACCTCCCGGGTTGAG+GGG + tig0032326:33288-33307 Msa1448790:CDS 60.0%
ATGTAACCCCTCAACCCGGG+AGG - tig0032326:33297-33316 None:intergenic 60.0%
CGAAGACTCTGGTGGCACCT+AGG + tig0032326:33750-33769 Msa1448790:CDS 60.0%
AGACTCTGGTGGCACCTAGG+TGG + tig0032326:33753-33772 Msa1448790:CDS 60.0%
! TTTCAGGAGGTGCGGGAGGG+AGG - tig0032326:31290-31309 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0032326 gene 28787 35021 28787 ID=Msa1448790;Name=Msa1448790
tig0032326 mRNA 28787 35021 28787 ID=Msa1448790-mRNA-1;Parent=Msa1448790;Name=Msa1448790-mRNA-1;_AED=0.01;_eAED=0.01;_QI=444|0.75|1|1|0.5|0.4|5|297|805
tig0032326 exon 28787 28930 28787 ID=Msa1448790-mRNA-1:exon:16609;Parent=Msa1448790-mRNA-1
tig0032326 exon 28952 29182 28952 ID=Msa1448790-mRNA-1:exon:16610;Parent=Msa1448790-mRNA-1
tig0032326 exon 31705 31830 31705 ID=Msa1448790-mRNA-1:exon:16611;Parent=Msa1448790-mRNA-1
tig0032326 exon 31961 34228 31961 ID=Msa1448790-mRNA-1:exon:16612;Parent=Msa1448790-mRNA-1
tig0032326 exon 34632 35021 34632 ID=Msa1448790-mRNA-1:exon:16613;Parent=Msa1448790-mRNA-1
tig0032326 five_prime_UTR 28787 28930 28787 ID=Msa1448790-mRNA-1:five_prime_utr;Parent=Msa1448790-mRNA-1
tig0032326 five_prime_UTR 28952 29182 28952 ID=Msa1448790-mRNA-1:five_prime_utr;Parent=Msa1448790-mRNA-1
tig0032326 five_prime_UTR 31705 31773 31705 ID=Msa1448790-mRNA-1:five_prime_utr;Parent=Msa1448790-mRNA-1
tig0032326 CDS 31774 31830 31774 ID=Msa1448790-mRNA-1:cds;Parent=Msa1448790-mRNA-1
tig0032326 CDS 31961 34228 31961 ID=Msa1448790-mRNA-1:cds;Parent=Msa1448790-mRNA-1
tig0032326 CDS 34632 34724 34632 ID=Msa1448790-mRNA-1:cds;Parent=Msa1448790-mRNA-1
tig0032326 three_prime_UTR 34725 35021 34725 ID=Msa1448790-mRNA-1:three_prime_utr;Parent=Msa1448790-mRNA-1
Gene Sequence

>Msa1448790

ATGGAAAATAATGTTGAAGAGAATATGCAGATGGATGAATCTGTTGCATCTGTGGAGGGACTAGAAGGCTTGTCAGATGGGGTAAGTGATGAAGCAACATTTGAGACTGTTGACGATGATGCCGGTAGTGTTGAGGCTGGGGAAGGTACCGAAGAAATTACATATATTGATAACAAGGAGGATATTCTTCGCATGGACCTGAAGGGATCAAGTCCCCATGAGACAAGGAAATTTGAGTTTTCAAGTTTGGATATGGCTTATGAGTTCTATAACTGGTATGCTAGAATGAATGGGTTTGCGGTCCGCAAGAGCAAGATGATTAAAAGCAATAAAGGGGAACTATTACAGCAAACCTTTGTCTGCCATAGACAAGGGTTTAGGGAGGATAGAGGTTTAACAATAGAAAACCGTAAGCGTGAGTGTAAACCCGAGACTCGGTGTGGATGTGAAGCAAAATTTCGGGTGCATATAGATATGTTCTCACAACGTTGGTTGATAACTGTTTTTACCGATCAACACAACCATGAGCTTTTAGGTGAAGAGTACAATGGAATGCTTGCTGCACATCGAAAAATGAAAGAGTCGGATATAATGCAGATGAACGACATGTTGAAGGTTGGGATAGGGCCGTCTCGATTCTATAGTTCTTTGGCAAACCAATCAGGAGGGTATGAAAAGATAGGGTTTCGAAAGAAGGATATATATAATCAGATAGGAAAGCAACGCCTTTTAAAACGGTGTGATGGTAAAAATGCTCTACAATATCTTCGTGGGCTGGCATCAAATGACTCGATGATGTTTTATCGCCACACTGTTGATGGAGAAGGTAGACTTGAACACCTGTTTTGGTGTGACGGTATTAGCCAGTTGGAATACAATGTTTATGGTGATGTGTTGGCATTTGATGCAACATATGGAACAAATAAATATCATTGTCCCTTAGTGGTGTTTTCTGGCGTTAATAACCATAATCATAACGTTATATTTGCTGGTGCTATTGTTGCAAATGAAAAAGAAGAAACTTATGTGTGGGTTCTTGAACAATTTTTGGAAGCAATGTCTGGCAAATCGCCTATATCTGTCATTACTGATGGCGATCTTGCAATGAAGAATGCTATTAAAAAGGTGTTTCCAAATGCTTATCATAGATTGTGTGCTTGGCATCTAATTTGCAACGCAGCATCTAACGTTGGAATTCCTGAGTTTGTGGGTCGGTTCAGGATATGCATGTTGGGTGATTATGATCTTGGTGAGTTTCGGCGCAAGTGGACTGAAATGGTTGATACATTTGGGTTGCATGACAACAAGTGGGTTAAAGAGTTGTATGCAAAGAGAAAGATGTGGGCCACAGCACACATACGCGGCAATTTTTTTGCTGGGTTCAGAACTACCTCCCGGGTTGAGGGGTTACATTCAGAAATGGGGAAGTTTCTTGACTCGCGATATAATTTGACCGACTTTTTGCTACATTTTCATCGATGCCTTAATTACATGCGTTTCAAGGAGGTTGAAGCTGACTTTTCTTCTAATTACGGTGATCCGGTACTACAAACAAGATTTCAAAGCATGGAGCGTTGTGCTGGAAAGTTATTTACTCGAGAACTATTCTTAATATTTCGTGATATTCTTGCACGGTCTGCAGATATGGTCGTGACAGCATGCAATCAAACTTACACATGCTTCATATACACAGTTTGTAAGTACCAAGCATCTAAACGGGAGTGGAACATATCATTTTATCCAGATGATGATGTGTTCAAGTGTTCTTGCAAGAAGATGGAGTCATTTGGCCTCCCATGCGAGCATATTATTGCACTATTGGTTTTTTTGGATGTTGCAGAATTGCCGAAGACTCTGGTGGCACCTAGGTGGACAAAGAATGCGAAGGAAGCAGTATGTAGCACAAATAAGCCTCTTCCAAAATATTGGGATTCACATAAGTCGTCTAGATATTCTGCTCTTTTGTTTCGATATATGCGTTTGAGCAAATTAGCAAGTGAGAGTGGTGATGATTTCAATGATCATATGGAGCAGGCTGCTGCTGATATTCAGAAGATGGAAACAAAGAGGGGTTTACATGATGGCGGAGCCACTGATTCAAGTCAAAGTGACCATGAGATATTGAGGGATCCTGCTCCGGTAAGAAGTAAAGGATGTGCTGCTTTAGCTTCGTCACTTACTCGGAAGAAAAGGAAGCGAACTCGGTGTTCTACTTGTAGAGAATTCGGACATAATAAACAAACGTGTCCAATACGTCGACATCATGCTAACACGACACATTCACCACATGAAGATCATCACAACAATGACTTCAGTGACAACTTTGTTGATGAGGCATGCATGTGTGTCAACATGGATCCTTTCAAGAGACCAATCATCAGAGAATTTGTTGAATGGCTAAATAAAGAATGTTCATAG
Protein sequence

>Msa1448790

MENNVEENMQMDESVASVEGLEGLSDGVSDEATFETVDDDAGSVEAGEGTEEITYIDNKEDILRMDLKGSSPHETRKFEFSSLDMAYEFYNWYARMNGFAVRKSKMIKSNKGELLQQTFVCHRQGFREDRGLTIENRKRECKPETRCGCEAKFRVHIDMFSQRWLITVFTDQHNHELLGEEYNGMLAAHRKMKESDIMQMNDMLKVGIGPSRFYSSLANQSGGYEKIGFRKKDIYNQIGKQRLLKRCDGKNALQYLRGLASNDSMMFYRHTVDGEGRLEHLFWCDGISQLEYNVYGDVLAFDATYGTNKYHCPLVVFSGVNNHNHNVIFAGAIVANEKEETYVWVLEQFLEAMSGKSPISVITDGDLAMKNAIKKVFPNAYHRLCAWHLICNAASNVGIPEFVGRFRICMLGDYDLGEFRRKWTEMVDTFGLHDNKWVKELYAKRKMWATAHIRGNFFAGFRTTSRVEGLHSEMGKFLDSRYNLTDFLLHFHRCLNYMRFKEVEADFSSNYGDPVLQTRFQSMERCAGKLFTRELFLIFRDILARSADMVVTACNQTYTCFIYTVCKYQASKREWNISFYPDDDVFKCSCKKMESFGLPCEHIIALLVFLDVAELPKTLVAPRWTKNAKEAVCSTNKPLPKYWDSHKSSRYSALLFRYMRLSKLASESGDDFNDHMEQAAADIQKMETKRGLHDGGATDSSQSDHEILRDPAPVRSKGCAALASSLTRKKRKRTRCSTCREFGHNKQTCPIRRHHANTTHSPHEDHHNNDFSDNFVDEACMCVNMDPFKRPIIREFVEWLNKECS*