Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0299640 | KAF1896562.1 | 75.296 | 591 | 129 | 5 | 1 | 577 | 1 | 588 | 0.0 | 920 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0299640 | sp|P34913|HYES_HUMAN | 34.043 | 329 | 192 | 12 | 269 | 584 | 236 | 552 | 3.67e-41 | 162 |
Msa0299640 | sp|P34913|HYES_HUMAN | 29.968 | 317 | 163 | 11 | 3 | 266 | 236 | 546 | 4.56e-27 | 120 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0299640 | A0A6A5PHT5 | 75.296 | 591 | 129 | 5 | 1 | 577 | 1 | 588 | 0.0 | 920 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0220480 | Msa0299640 | 0.878430 | 2.827303e-69 | -8.615850e-47 |
Msa0261810 | Msa0299640 | 0.804542 | 2.054602e-49 | -8.615850e-47 |
Msa0299640 | Msa0299660 | 0.892973 | 9.684560e-75 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0299640 | MtrunA17_Chr2g0324161 | 98.071 | 311 | 6 | 0 | 267 | 577 | 1 | 311 | 0.0 | 631 |
Msa0299640 | MtrunA17_Chr2g0324161 | 76.997 | 313 | 26 | 2 | 1 | 267 | 1 | 313 | 2.42e-163 | 474 |
Msa0299640 | MtrunA17_Chr2g0324141 | 90.675 | 311 | 29 | 0 | 267 | 577 | 1 | 311 | 0.0 | 585 |
Msa0299640 | MtrunA17_Chr2g0324141 | 81.150 | 313 | 13 | 2 | 1 | 267 | 1 | 313 | 4.59e-174 | 502 |
Msa0299640 | MtrunA17_Chr4g0047681 | 63.344 | 311 | 113 | 1 | 267 | 577 | 1 | 310 | 1.79e-139 | 413 |
Msa0299640 | MtrunA17_Chr4g0047681 | 58.333 | 312 | 83 | 3 | 1 | 266 | 1 | 311 | 5.44e-119 | 360 |
Msa0299640 | MtrunA17_Chr4g0047701 | 60.129 | 311 | 123 | 1 | 267 | 577 | 1 | 310 | 1.03e-135 | 404 |
Msa0299640 | MtrunA17_Chr4g0047701 | 54.808 | 312 | 94 | 3 | 1 | 266 | 1 | 311 | 7.16e-114 | 347 |
Msa0299640 | MtrunA17_Chr7g0272481 | 37.695 | 321 | 186 | 7 | 267 | 576 | 1 | 318 | 2.06e-64 | 217 |
Msa0299640 | MtrunA17_Chr7g0272481 | 36.398 | 261 | 141 | 7 | 1 | 239 | 1 | 258 | 7.10e-45 | 164 |
Msa0299640 | MtrunA17_Chr7g0272531 | 36.637 | 333 | 197 | 7 | 255 | 576 | 19 | 348 | 1.22e-63 | 216 |
Msa0299640 | MtrunA17_Chr7g0272531 | 36.398 | 261 | 141 | 7 | 1 | 239 | 31 | 288 | 1.84e-44 | 163 |
Msa0299640 | MtrunA17_Chr7g0272431 | 37.461 | 323 | 184 | 8 | 267 | 576 | 1 | 318 | 2.30e-62 | 212 |
Msa0299640 | MtrunA17_Chr7g0272431 | 35.055 | 271 | 153 | 6 | 1 | 250 | 1 | 269 | 3.01e-44 | 162 |
Msa0299640 | MtrunA17_Chr7g0272451 | 37.188 | 320 | 186 | 8 | 267 | 576 | 1 | 315 | 3.42e-62 | 211 |
Msa0299640 | MtrunA17_Chr7g0272451 | 34.701 | 268 | 149 | 7 | 1 | 247 | 1 | 263 | 7.75e-44 | 160 |
Msa0299640 | MtrunA17_Chr7g0272181 | 37.072 | 321 | 188 | 7 | 267 | 576 | 1 | 318 | 1.15e-61 | 210 |
Msa0299640 | MtrunA17_Chr7g0272181 | 36.029 | 272 | 149 | 7 | 1 | 250 | 1 | 269 | 1.99e-44 | 162 |
Msa0299640 | MtrunA17_Chr7g0269471 | 36.760 | 321 | 187 | 8 | 267 | 576 | 1 | 316 | 7.03e-61 | 207 |
Msa0299640 | MtrunA17_Chr7g0269471 | 30.841 | 321 | 160 | 10 | 1 | 264 | 1 | 316 | 5.41e-42 | 155 |
Msa0299640 | MtrunA17_Chr7g0272501 | 36.137 | 321 | 191 | 7 | 267 | 576 | 1 | 318 | 2.99e-60 | 206 |
Msa0299640 | MtrunA17_Chr7g0272501 | 35.249 | 261 | 144 | 7 | 1 | 239 | 1 | 258 | 7.44e-43 | 158 |
Msa0299640 | MtrunA17_Chr7g0272171 | 35.826 | 321 | 192 | 7 | 267 | 576 | 1 | 318 | 4.82e-60 | 206 |
Msa0299640 | MtrunA17_Chr7g0272171 | 32.399 | 321 | 157 | 10 | 1 | 264 | 1 | 318 | 2.79e-42 | 156 |
Msa0299640 | MtrunA17_Chr4g0000111 | 36.503 | 326 | 186 | 9 | 267 | 576 | 1 | 321 | 2.97e-59 | 203 |
Msa0299640 | MtrunA17_Chr4g0000111 | 35.897 | 273 | 145 | 8 | 1 | 247 | 1 | 269 | 2.79e-43 | 159 |
Msa0299640 | MtrunA17_Chr8g0372491 | 34.591 | 318 | 196 | 6 | 267 | 576 | 3 | 316 | 3.66e-59 | 203 |
Msa0299640 | MtrunA17_Chr8g0372491 | 29.283 | 321 | 171 | 7 | 1 | 268 | 3 | 320 | 3.90e-42 | 156 |
Msa0299640 | MtrunA17_Chr7g0272441 | 35.202 | 321 | 194 | 7 | 267 | 576 | 1 | 318 | 1.70e-58 | 201 |
Msa0299640 | MtrunA17_Chr7g0272441 | 32.353 | 272 | 159 | 6 | 1 | 250 | 1 | 269 | 3.21e-40 | 150 |
Msa0299640 | MtrunA17_Chr4g0067581 | 34.259 | 324 | 199 | 8 | 264 | 576 | 34 | 354 | 3.08e-55 | 194 |
Msa0299640 | MtrunA17_Chr4g0067581 | 28.037 | 321 | 171 | 8 | 1 | 264 | 37 | 354 | 5.36e-38 | 145 |
Msa0299640 | MtrunA17_Chr2g0324171 | 85.455 | 110 | 16 | 0 | 661 | 770 | 580 | 689 | 1.34e-48 | 182 |
Msa0299640 | MtrunA17_Chr2g0324171 | 81.633 | 98 | 10 | 1 | 571 | 660 | 199 | 296 | 2.68e-42 | 164 |
Msa0299640 | MtrunA17_Chr2g0324471 | 73.469 | 98 | 18 | 1 | 571 | 660 | 220 | 317 | 1.05e-36 | 147 |
Msa0299640 | MtrunA17_Chr2g0324471 | 63.636 | 110 | 26 | 2 | 661 | 770 | 604 | 699 | 4.31e-33 | 136 |
Msa0299640 | MtrunA17_Chr7g0272471 | 41.026 | 156 | 88 | 2 | 267 | 418 | 1 | 156 | 3.80e-35 | 131 |
Msa0299640 | MtrunA17_Chr7g0272471 | 37.179 | 156 | 82 | 2 | 1 | 140 | 1 | 156 | 7.93e-30 | 115 |
Msa0299640 | MtrunA17_Chr1g0192291 | 43.411 | 129 | 72 | 1 | 267 | 395 | 1 | 128 | 1.59e-32 | 124 |
Msa0299640 | MtrunA17_Chr1g0192291 | 41.860 | 129 | 62 | 2 | 1 | 117 | 1 | 128 | 5.64e-28 | 110 |
Msa0299640 | MtrunA17_Chr2g0324481 | 50.617 | 81 | 40 | 0 | 579 | 659 | 213 | 293 | 2.73e-18 | 89.7 |
Msa0299640 | MtrunA17_Chr2g0324481 | 41.935 | 124 | 66 | 2 | 652 | 770 | 570 | 692 | 4.10e-17 | 85.9 |
Msa0299640 | MtrunA17_Chr2g0282271 | 51.852 | 81 | 39 | 0 | 580 | 660 | 219 | 299 | 9.71e-16 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0299640 | AT4G02340.1 | 36.223 | 323 | 193 | 7 | 267 | 580 | 1 | 319 | 3.22e-62 | 212 |
Msa0299640 | AT4G02340.1 | 31.661 | 319 | 159 | 9 | 1 | 264 | 1 | 315 | 9.88e-42 | 155 |
Msa0299640 | AT3G05600.1 | 36.474 | 329 | 188 | 10 | 267 | 578 | 1 | 325 | 3.14e-57 | 199 |
Msa0299640 | AT3G05600.1 | 30.395 | 329 | 168 | 8 | 1 | 269 | 1 | 328 | 1.60e-39 | 149 |
Msa0299640 | AT3G51000.1 | 35.331 | 317 | 194 | 6 | 269 | 576 | 4 | 318 | 1.54e-56 | 196 |
Msa0299640 | AT3G51000.1 | 29.467 | 319 | 168 | 7 | 3 | 266 | 4 | 320 | 8.01e-38 | 144 |
Msa0299640 | AT4G15960.1 | 34.545 | 330 | 197 | 11 | 263 | 576 | 47 | 373 | 3.35e-53 | 189 |
Msa0299640 | AT4G15960.1 | 29.179 | 329 | 162 | 12 | 1 | 264 | 51 | 373 | 1.69e-35 | 139 |
Msa0299640 | AT2G26740.1 | 31.677 | 322 | 203 | 8 | 270 | 576 | 1 | 320 | 8.72e-45 | 164 |
Msa0299640 | AT2G26740.1 | 28.037 | 321 | 170 | 9 | 4 | 264 | 1 | 320 | 7.02e-33 | 130 |
Msa0299640 | AT4G15955.3 | 31.077 | 325 | 178 | 10 | 269 | 574 | 4 | 301 | 2.25e-43 | 159 |
Msa0299640 | AT4G15955.3 | 27.077 | 325 | 145 | 11 | 3 | 262 | 4 | 301 | 5.13e-29 | 118 |
Msa0299640 | AT2G26750.1 | 30.721 | 319 | 205 | 8 | 270 | 574 | 1 | 317 | 3.10e-43 | 159 |
Msa0299640 | AT2G26750.1 | 26.415 | 318 | 174 | 9 | 4 | 262 | 1 | 317 | 8.49e-31 | 124 |
Msa0299640 | AT3G05600.2 | 36.842 | 247 | 140 | 8 | 267 | 501 | 1 | 243 | 9.60e-43 | 155 |
Msa0299640 | AT3G05600.2 | 34.016 | 244 | 139 | 6 | 1 | 223 | 1 | 243 | 5.76e-38 | 142 |
Msa0299640 | AT4G15955.2 | 36.000 | 175 | 98 | 5 | 269 | 429 | 4 | 178 | 1.58e-28 | 113 |
Msa0299640 | AT4G15955.2 | 34.857 | 175 | 88 | 5 | 3 | 151 | 4 | 178 | 9.83e-27 | 108 |
Msa0299640 | AT4G15955.1 | 35.928 | 167 | 93 | 5 | 269 | 421 | 4 | 170 | 6.33e-26 | 105 |
Msa0299640 | AT4G15955.1 | 34.731 | 167 | 83 | 5 | 3 | 143 | 4 | 170 | 3.09e-24 | 100 |
Msa0299640 | AT4G12830.1 | 25.084 | 299 | 165 | 11 | 294 | 577 | 136 | 390 | 1.63e-13 | 73.6 |
Msa0299640 | AT4G28350.1 | 40.299 | 134 | 66 | 3 | 574 | 705 | 210 | 331 | 3.26e-12 | 70.5 |
Find 191 sgRNAs with CRISPR-Local
Find 757 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTATCAGGCTATCATTAT+TGG | 0.155003 | 2_3:+54802089 | Msa0299640:intron |
CTCCAAGTATACCATATTTC+TGG | 0.167335 | 2_3:-54801361 | None:intergenic |
TTCACAATCTGTCTCATTAT+TGG | 0.183345 | 2_3:-54811973 | None:intergenic |
CTCCATGTATACCATATTTC+TGG | 0.204004 | 2_3:-54805681 | None:intergenic |
TAACCTTTCTGGAGTTCTTA+TGG | 0.216791 | 2_3:+54810841 | Msa0299640:CDS |
AGCATGAATCTTAACCTTTC+TGG | 0.238920 | 2_3:+54810830 | Msa0299640:CDS |
GGCATTCCCTTCATACTTCC+TGG | 0.245208 | 2_3:+54802188 | Msa0299640:CDS |
TACATGGATTTCCAGAAATA+TGG | 0.250760 | 2_3:+54805670 | Msa0299640:CDS |
TTGATGTTAAATCTGTTATA+AGG | 0.257245 | 2_3:+54807007 | Msa0299640:CDS |
TTGATGTTAAATCAGTTATA+AGG | 0.281687 | 2_3:+54802496 | Msa0299640:CDS |
TGTTCCTGCGCTGCTGATAA+TGG | 0.283090 | 2_3:+54803446 | Msa0299640:CDS |
TGCATGGATTCCCAGAAATA+TGG | 0.287117 | 2_3:+54801350 | Msa0299640:CDS |
AGCTGAGAGATTGCTTCATT+TGG | 0.287953 | 2_3:+54811915 | Msa0299640:CDS |
CGAATCTGATGAAGAAAATA+TGG | 0.289809 | 2_3:+54812023 | Msa0299640:CDS |
TGCACAAAATGACTTCCTTC+TGG | 0.292605 | 2_3:-54807706 | None:intergenic |
GGAATTGTTCATGCACAAAA+TGG | 0.293610 | 2_3:-54803678 | None:intergenic |
TGGCTTCAGATTTGCATTGC+AGG | 0.296497 | 2_3:+54802665 | Msa0299640:CDS |
TGGCTTCAGATTTGCATTGC+AGG | 0.296497 | 2_3:+54807176 | Msa0299640:CDS |
CCTTCATTTGTCCCTCATAA+AGG | 0.307672 | 2_3:+54810986 | Msa0299640:CDS |
GCCGGAAAAGGCAACTTTAA+TGG | 0.310165 | 2_3:+54801471 | Msa0299640:CDS |
GACTACTGTTTCAACTTTCC+TGG | 0.312189 | 2_3:+54807616 | Msa0299640:CDS |
CATTTACTTTAGGATCAATT+AGG | 0.317017 | 2_3:-54807564 | None:intergenic |
AGTGCAGGAACATTTACTTT+AGG | 0.323205 | 2_3:-54807574 | None:intergenic |
ACAGATTGTGAAAATGTTAC+AGG | 0.327026 | 2_3:+54811984 | Msa0299640:CDS |
TGTTCCTGCACTGCTGATAA+TGG | 0.329656 | 2_3:+54807585 | Msa0299640:CDS |
CTAGTAATGTAGAAGCCTTT+TGG | 0.342223 | 2_3:-54806759 | None:intergenic |
CATGGTGGGAGGGGAGTAGA+TGG | 0.344585 | 2_3:-54807105 | None:intergenic |
GTGTGTATGATTGAGTTATA+TGG | 0.348873 | 2_3:-54801125 | None:intergenic |
ATGAGCTTGTTCACTTCCTC+TGG | 0.363781 | 2_3:-54807739 | None:intergenic |
ATAAGCTTGTTCACTTCCTC+TGG | 0.367368 | 2_3:-54803700 | None:intergenic |
GTAGCTTCTGTCATAACTTT+AGG | 0.369339 | 2_3:+54802167 | Msa0299640:CDS |
AGCGCAGGAACATTTACTTT+AGG | 0.370862 | 2_3:-54803435 | None:intergenic |
GGGAGGGCAGAAGCAGATTT+CGG | 0.376983 | 2_3:+54802468 | Msa0299640:CDS |
ATTCTAATTTCATCAAAAGT+AGG | 0.378007 | 2_3:-54812123 | None:intergenic |
GTGTTGGATGTTCTCCATCT+TGG | 0.379991 | 2_3:-54801170 | None:intergenic |
CTAGTGATGTAGAAGCCTTT+TGG | 0.380113 | 2_3:-54802239 | None:intergenic |
AAAGTAGGGTGATCTCTAAA+TGG | 0.382698 | 2_3:-54812108 | None:intergenic |
ATCATATACTTTGTTTATCA+AGG | 0.383460 | 2_3:-54807771 | None:intergenic |
TCTTGATTATCACCTGCTAC+TGG | 0.385504 | 2_3:-54802552 | None:intergenic |
ATCATTATTGGTAAGGACTT+TGG | 0.388030 | 2_3:+54802101 | Msa0299640:CDS |
GTGGCTTCTCTCATAACTTT+AGG | 0.388617 | 2_3:+54806687 | Msa0299640:CDS |
GCTGAGAGATTGCTTCATTT+GGG | 0.388864 | 2_3:+54811916 | Msa0299640:CDS |
TTGTAATTTGATTACCTGTA+TGG | 0.393462 | 2_3:-54802690 | None:intergenic |
GGAGCAAAGGCTATAGATAT+AGG | 0.397615 | 2_3:+54811019 | Msa0299640:CDS |
TTCTATCAGGCATTCCTCAT+TGG | 0.398568 | 2_3:+54806609 | Msa0299640:intron |
CATGGTGGGAGGGGAGTAGA+TGG | 0.401906 | 2_3:-54802594 | None:intergenic |
TCCTTGCTGATATCTGAATC+TGG | 0.402191 | 2_3:-54812198 | None:intergenic |
GGGAGGGCAGAAGCAGATTT+CGG | 0.403797 | 2_3:+54806979 | Msa0299640:CDS |
GGCATTCCTTTCATGAATCC+TGG | 0.405213 | 2_3:+54806708 | Msa0299640:CDS |
GCCTTTGATTCTAGAGGCTA+TGG | 0.410916 | 2_3:+54805747 | Msa0299640:CDS |
AAGCTCCATGTAGCTGAGAT+TGG | 0.413032 | 2_3:+54805539 | Msa0299640:CDS |
CATTTACTTTAGGATCAGTT+AGG | 0.417982 | 2_3:-54803425 | None:intergenic |
CAAAAGGCTTCTACATTACT+AGG | 0.419163 | 2_3:+54806760 | Msa0299640:CDS |
GCTATAGATATAGGAATAAC+CGG | 0.419564 | 2_3:+54811028 | Msa0299640:CDS |
TCCCAGAAATATGGTATACT+TGG | 0.432297 | 2_3:+54801359 | Msa0299640:CDS |
CATTTGCAACAGCAATCATT+TGG | 0.438176 | 2_3:-54805707 | None:intergenic |
ATATAAATGATTTCTAAGTC+TGG | 0.443671 | 2_3:-54807682 | None:intergenic |
TGAGACTTTGATTACCTGTA+TGG | 0.446680 | 2_3:-54807201 | None:intergenic |
ATGATTGCTGTTGCAAATGC+TGG | 0.447159 | 2_3:+54801391 | Msa0299640:CDS |
TCCAAGTATACCATATTTCT+GGG | 0.447415 | 2_3:-54801360 | None:intergenic |
GTTCCTGCGCTGCTGATAAT+GGG | 0.450861 | 2_3:+54803447 | Msa0299640:CDS |
AATATGGAGAAAGGTTTACT+TGG | 0.451785 | 2_3:+54812039 | Msa0299640:CDS |
TTCTGATCATCCAGCTGAGC+CGG | 0.451997 | 2_3:+54801453 | Msa0299640:CDS |
ACACATGTAGTAAATGAGTT+AGG | 0.453226 | 2_3:+54801060 | Msa0299640:five_prime_UTR |
ATGATTGCTGTTGCAAATGC+TGG | 0.455512 | 2_3:+54805711 | Msa0299640:CDS |
AGTAAACTAATTCAGGAGCC+TGG | 0.459230 | 2_3:+54802447 | Msa0299640:intron |
AGTAAACTAATTCAGGAGCC+TGG | 0.459230 | 2_3:+54806958 | Msa0299640:intron |
TCTTGATCATCACTTGCTAC+TGG | 0.459301 | 2_3:-54807063 | None:intergenic |
CAAAACCATCTTCTTCCAAA+AGG | 0.462042 | 2_3:+54802224 | Msa0299640:CDS |
TTGCATTGCAGGTTCCATAC+AGG | 0.463920 | 2_3:+54802676 | Msa0299640:CDS |
TTGCATTGCAGGTTCCATAC+AGG | 0.463920 | 2_3:+54807187 | Msa0299640:CDS |
CTCATTATTGGTCTAACACC+AGG | 0.464809 | 2_3:-54811961 | None:intergenic |
CATGTAGCTGAGATTGGAAC+TGG | 0.474162 | 2_3:+54805545 | Msa0299640:CDS |
AAAAGTGAGGTCCCAGTAGC+AGG | 0.478456 | 2_3:+54802540 | Msa0299640:CDS |
CATGTAGCTGAGATCGGAAC+TGG | 0.478836 | 2_3:+54801223 | Msa0299640:CDS |
ATCATACGCTTTGTTTGTCA+AGG | 0.479663 | 2_3:-54803732 | None:intergenic |
CTTGATTATCACCTGCTACT+GGG | 0.479786 | 2_3:-54802551 | None:intergenic |
TTGTGCAGGTGAAAAGGTAG+TGG | 0.481233 | 2_3:+54801321 | Msa0299640:intron |
GTTCCTGCACTGCTGATAAT+GGG | 0.482974 | 2_3:+54807586 | Msa0299640:CDS |
AAATCTGCTTCTGCCCTCCC+AGG | 0.483719 | 2_3:-54802465 | None:intergenic |
TCAGAGAACCATGGTGGGAG+GGG | 0.492353 | 2_3:-54807114 | None:intergenic |
TCATCCAGCTGAGCCGGAAA+AGG | 0.494160 | 2_3:+54801459 | Msa0299640:CDS |
TTCTAATTTCATCAAAAGTA+GGG | 0.494956 | 2_3:-54812122 | None:intergenic |
GTTGGATTCTGTGCAGCCAC+GGG | 0.495333 | 2_3:+54810875 | Msa0299640:CDS |
CAGTTCCAATCTCAGCTACA+TGG | 0.495798 | 2_3:-54805544 | None:intergenic |
CCTTTATGAGGGACAAATGA+AGG | 0.495843 | 2_3:-54810986 | None:intergenic |
CGGATGTAGTCTTCCATGCC+AGG | 0.497187 | 2_3:-54807634 | None:intergenic |
CAGTTCCGATCTCAGCTACA+TGG | 0.498094 | 2_3:-54801222 | None:intergenic |
CAGAACCATCTTCTCCCAAA+AGG | 0.498875 | 2_3:+54806744 | Msa0299640:CDS |
ACAGCAGCTACAAGATATGC+TGG | 0.499367 | 2_3:-54802131 | None:intergenic |
TCACCCATTATCAGCAGTGC+AGG | 0.503679 | 2_3:-54807589 | None:intergenic |
TTAAGATTCATGCTGATAAG+AGG | 0.503976 | 2_3:-54810821 | None:intergenic |
TCAGAAAACCATGGTGGGAG+GGG | 0.505926 | 2_3:-54802603 | None:intergenic |
TTCCTCATTGGTAAGGACTC+TGG | 0.506255 | 2_3:+54806621 | Msa0299640:CDS |
TTCTGGATTGCAGAAGGACC+AGG | 0.507304 | 2_3:-54806726 | None:intergenic |
CGTTGGATTCTGTGCAGCCA+CGG | 0.510850 | 2_3:+54810874 | Msa0299640:CDS |
GATGAAGAAAATATGGAGAA+AGG | 0.511054 | 2_3:+54812030 | Msa0299640:CDS |
CTGTTTCAACTTTCCTGGCA+TGG | 0.511059 | 2_3:+54807621 | Msa0299640:CDS |
AGAAGGACCAGGAAGTATGA+AGG | 0.515229 | 2_3:-54802195 | None:intergenic |
CAAAAGGCTTCTACATCACT+AGG | 0.515709 | 2_3:+54802240 | Msa0299640:CDS |
TCACTTCCACATGACTGTGT+TGG | 0.520357 | 2_3:-54801186 | None:intergenic |
CAATCTCTCAGCTTCCTCAA+TGG | 0.520888 | 2_3:-54811905 | None:intergenic |
TCAGGCTATCATTATTGGTA+AGG | 0.521661 | 2_3:+54802094 | Msa0299640:intron |
ATAGTGTTAAGATTCTTGCT+TGG | 0.524312 | 2_3:+54810909 | Msa0299640:CDS |
AAATCTGCTTCTGCCCTCCC+AGG | 0.524619 | 2_3:-54806976 | None:intergenic |
TGGCTCGGGCAGGACGAAAG+AGG | 0.525762 | 2_3:+54810789 | Msa0299640:intron |
CTCAGAAAACCATGGTGGGA+GGG | 0.528522 | 2_3:-54802604 | None:intergenic |
ATCTGAATCTGGTGGCGGAA+TGG | 0.529140 | 2_3:-54812187 | None:intergenic |
AGGTGATAATCAAGAAATCA+TGG | 0.529207 | 2_3:+54802560 | Msa0299640:CDS |
AAGTGATGATCAAGAAATCA+TGG | 0.529207 | 2_3:+54807071 | Msa0299640:CDS |
CATTTGTCCCTCATAAAGGA+TGG | 0.529519 | 2_3:+54810990 | Msa0299640:CDS |
CTTCTACATCACTAGGTGGC+AGG | 0.532713 | 2_3:+54802247 | Msa0299640:CDS |
TTCCAGAAATATGGTATACA+TGG | 0.532909 | 2_3:+54805679 | Msa0299640:CDS |
CTGTGTTCAAATTCAGACCC+TGG | 0.534048 | 2_3:+54811943 | Msa0299640:CDS |
CTCAGAGAACCATGGTGGGA+GGG | 0.535598 | 2_3:-54807115 | None:intergenic |
GCTATTGCCTTTGATTCTAG+AGG | 0.536081 | 2_3:+54805741 | Msa0299640:CDS |
TCACCCATTATCAGCAGCGC+AGG | 0.537873 | 2_3:-54803450 | None:intergenic |
CTTCTACATTACTAGGTGGC+AGG | 0.538576 | 2_3:+54806767 | Msa0299640:CDS |
TGTTCTCCATCTTGGATGAA+TGG | 0.542129 | 2_3:-54801162 | None:intergenic |
TCAGGCATTCCTCATTGGTA+AGG | 0.545772 | 2_3:+54806614 | Msa0299640:intron |
TCCATAGCCTCTAGAATCAA+AGG | 0.546310 | 2_3:-54805748 | None:intergenic |
CATCCATAAGAACTCCAGAA+AGG | 0.551408 | 2_3:-54810844 | None:intergenic |
TCACTTCTACATGACTGTGT+TGG | 0.551579 | 2_3:-54805508 | None:intergenic |
GTAAACTAATTCAGGAGCCT+GGG | 0.554497 | 2_3:+54802448 | Msa0299640:intron |
GTAAACTAATTCAGGAGCCT+GGG | 0.554497 | 2_3:+54806959 | Msa0299640:intron |
TCCATAGCCTCTAAAATCAA+AGG | 0.557457 | 2_3:-54801428 | None:intergenic |
AAGCTCCATGTAGCTGAGAT+CGG | 0.562273 | 2_3:+54801217 | Msa0299640:CDS |
CTGATATCTGAATCTGGTGG+CGG | 0.562483 | 2_3:-54812192 | None:intergenic |
GAAATCATTTATATTCCAGA+AGG | 0.563505 | 2_3:+54807691 | Msa0299640:CDS |
TGAGCTTGTTCACTTCCTCT+GGG | 0.566276 | 2_3:-54807738 | None:intergenic |
AGGTCTCTCACAGTGGAAAG+TGG | 0.566949 | 2_3:+54803402 | Msa0299640:intron |
AGGTCTCTCACAGTGGAAAG+TGG | 0.566949 | 2_3:+54807541 | Msa0299640:intron |
GAAGGACCAGGAAGTATGAA+GGG | 0.568631 | 2_3:-54802194 | None:intergenic |
ACTTCACCATTCATCCAAGA+TGG | 0.569469 | 2_3:+54801156 | Msa0299640:exon |
TAAGCTTGTTCACTTCCTCT+GGG | 0.577933 | 2_3:-54803699 | None:intergenic |
ACACAGTCATGTGGAAGTGA+AGG | 0.579873 | 2_3:+54801189 | Msa0299640:CDS |
AACTAATTCAGGAGCCTGGG+AGG | 0.583125 | 2_3:+54802451 | Msa0299640:intron |
AACTAATTCAGGAGCCTGGG+AGG | 0.583125 | 2_3:+54806962 | Msa0299640:intron |
TGGAAGACTACATCCGAAGT+GGG | 0.590452 | 2_3:+54807641 | Msa0299640:CDS |
GATTCAGATATCAGCAAGGA+AGG | 0.592002 | 2_3:+54812201 | Msa0299640:CDS |
ACACAGTCATGTAGAAGTGA+AGG | 0.592451 | 2_3:+54805511 | Msa0299640:CDS |
AGCTACAAGATATGCTGGGA+TGG | 0.592615 | 2_3:-54802126 | None:intergenic |
AGATGGTTCTGGATTGCAGA+AGG | 0.595396 | 2_3:-54806732 | None:intergenic |
CTTATGGATGAAACTTACGT+TGG | 0.599623 | 2_3:+54810857 | Msa0299640:CDS |
GGACCTCGTTGATGAAGTCA+AGG | 0.599881 | 2_3:+54805812 | Msa0299640:CDS |
GCTCAGAAAACCATGGTGGG+AGG | 0.603969 | 2_3:-54802605 | None:intergenic |
AATTCTAAGACGTCTTCAAG+AGG | 0.603970 | 2_3:+54812156 | Msa0299640:CDS |
CCTCAGAGAACCATGGTGGG+AGG | 0.604144 | 2_3:-54807116 | None:intergenic |
GAAGGACCAGGATTCATGAA+AGG | 0.609615 | 2_3:-54806714 | None:intergenic |
CACAGTCATGTGGAAGTGAA+GGG | 0.615556 | 2_3:+54801190 | Msa0299640:CDS |
ATGGTGGGAGGGGAGTAGAT+GGG | 0.615799 | 2_3:-54807104 | None:intergenic |
CTTGCTCAGAAAACCATGGT+GGG | 0.619613 | 2_3:-54802608 | None:intergenic |
CAGATTGTGAAAATGTTACA+GGG | 0.624874 | 2_3:+54811985 | Msa0299640:CDS |
ATGGAAGACTACATCCGAAG+TGG | 0.631732 | 2_3:+54807640 | Msa0299640:CDS |
TAAAAGAAGAAAGAAAACAA+AGG | 0.633476 | 2_3:-54801101 | None:intergenic |
CCTCCCACCATGGTTCTCTG+AGG | 0.633901 | 2_3:+54807116 | Msa0299640:CDS |
ACTAATTCAGGAGCCTGGGA+GGG | 0.638834 | 2_3:+54802452 | Msa0299640:intron |
ACTAATTCAGGAGCCTGGGA+GGG | 0.638834 | 2_3:+54806963 | Msa0299640:intron |
CAGCAGCTACAAGATATGCT+GGG | 0.639715 | 2_3:-54802130 | None:intergenic |
CATCTACTCCCCTCCCACCA+TGG | 0.640005 | 2_3:+54807106 | Msa0299640:CDS |
CTTCCTCAGAGAACCATGGT+GGG | 0.642585 | 2_3:-54807119 | None:intergenic |
ATGCTGATAAGAGGCACATG+TGG | 0.642832 | 2_3:-54810812 | None:intergenic |
CATCTACTCCCCTCCCACCA+TGG | 0.645538 | 2_3:+54802595 | Msa0299640:CDS |
AGGTACAAGATTTGCTACAA+AGG | 0.649014 | 2_3:-54806646 | None:intergenic |
CACCAGAGTCCTTACCAATG+AGG | 0.649750 | 2_3:-54806623 | None:intergenic |
GATCCTTGACTTCATCAACA+AGG | 0.650778 | 2_3:-54801495 | None:intergenic |
TAAAATCAAAGGCAATAGCA+CGG | 0.651343 | 2_3:-54801417 | None:intergenic |
CACAGTCATGTAGAAGTGAA+GGG | 0.655684 | 2_3:+54805512 | Msa0299640:CDS |
TAGAATCAAAGGCAATAGCA+CGG | 0.658163 | 2_3:-54805737 | None:intergenic |
GAACATCCAACACAGTCATG+TGG | 0.659515 | 2_3:+54801180 | Msa0299640:CDS |
AGACTACATCCGAAGTGGGG+CGG | 0.665888 | 2_3:+54807645 | Msa0299640:CDS |
TAACTGATTTAACATCAAAG+CGG | 0.669179 | 2_3:-54802491 | None:intergenic |
ACCAGATTCAGATATCAGCA+AGG | 0.684797 | 2_3:+54812197 | Msa0299640:CDS |
GAATAAAATCAGCTGCAATG+TGG | 0.687578 | 2_3:+54812064 | Msa0299640:CDS |
TAAGGGAGGATACACCATTG+AGG | 0.687932 | 2_3:+54811891 | Msa0299640:intron |
AAGTCTTCCTCAGAGAACCA+TGG | 0.688812 | 2_3:-54807123 | None:intergenic |
TCATTATTGGTCTAACACCA+GGG | 0.690921 | 2_3:-54811960 | None:intergenic |
TCTTCCTCAGAGAACCATGG+TGG | 0.694615 | 2_3:-54807120 | None:intergenic |
GGAAGACTACATCCGAAGTG+GGG | 0.697396 | 2_3:+54807642 | Msa0299640:CDS |
AGATACATTAGGTATCAACA+AGG | 0.697682 | 2_3:+54805842 | Msa0299640:CDS |
TCTTGCTCAGAAAACCATGG+TGG | 0.699941 | 2_3:-54802609 | None:intergenic |
AAGTCTTGCTCAGAAAACCA+TGG | 0.700006 | 2_3:-54802612 | None:intergenic |
TTGGATTCTGTGCAGCCACG+GGG | 0.702831 | 2_3:+54810876 | Msa0299640:CDS |
TCCACACAGGTCTCTCACAG+TGG | 0.707979 | 2_3:+54803395 | Msa0299640:intron |
TCCACACAGGTCTCTCACAG+TGG | 0.707979 | 2_3:+54807534 | Msa0299640:intron |
TTGCTGATATCTGAATCTGG+TGG | 0.708943 | 2_3:-54812195 | None:intergenic |
AAGGCTTCTACATTACTAGG+TGG | 0.741389 | 2_3:+54806763 | Msa0299640:CDS |
AAGGCTTCTACATCACTAGG+TGG | 0.743685 | 2_3:+54802243 | Msa0299640:CDS |
TGTGCATGAACAATTCCCAG+AGG | 0.744075 | 2_3:+54803684 | Msa0299640:CDS |
TGTGCATGAACAATTCCCAG+AGG | 0.744075 | 2_3:+54807723 | Msa0299640:CDS |
GATCCTTGACTTCATCAACG+AGG | 0.782195 | 2_3:-54805815 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTCAATTCTTTTAATTTA+TGG | - | chr2_3:54801759-54801778 | None:intergenic | 10.0% |
!! | ACAAAATATAATAATTGTAA+TGG | + | chr2_3:54802927-54802946 | Msa0299640:intron | 10.0% |
!!! | CAAGAATATTTTTTTATATA+TGG | - | chr2_3:54805583-54805602 | None:intergenic | 10.0% |
!!! | ACATATTTTAATTTTATTCT+GGG | - | chr2_3:54809727-54809746 | None:intergenic | 10.0% |
!! | ACAAAAATATCTTTCATTAA+TGG | + | chr2_3:54801694-54801713 | Msa0299640:intron | 15.0% |
!! | ATAGAAGATAAATATGATTA+TGG | - | chr2_3:54802286-54802305 | None:intergenic | 15.0% |
!!! | TTTTTGCTTTTATTTAAGTT+CGG | + | chr2_3:54802393-54802412 | Msa0299640:intron | 15.0% |
!! | ATTCAACTTAAAATCATAAT+TGG | + | chr2_3:54802712-54802731 | Msa0299640:intron | 15.0% |
!! | TTCTATTCCAAATAATTATA+AGG | + | chr2_3:54802957-54802976 | Msa0299640:intron | 15.0% |
!!! | TTTTGACTAAATAATCATTT+TGG | + | chr2_3:54803002-54803021 | Msa0299640:intron | 15.0% |
!!! | TTGTAATTTTGATTAATTTG+AGG | - | chr2_3:54803058-54803077 | None:intergenic | 15.0% |
!!! | ATTGACTTAATACAAAAAAA+AGG | - | chr2_3:54803305-54803324 | None:intergenic | 15.0% |
!!! | AAATGAGATAAAATTGTTTT+TGG | + | chr2_3:54804012-54804031 | Msa0299640:intron | 15.0% |
!! | AGATAAGTATATTTAACAAA+TGG | - | chr2_3:54804739-54804758 | None:intergenic | 15.0% |
!!! | CTAAGAAGTTATTTATTTTT+AGG | + | chr2_3:54805191-54805210 | Msa0299640:intron | 15.0% |
!! | GTGATAAAATTTATTTATGT+TGG | - | chr2_3:54805917-54805936 | None:intergenic | 15.0% |
!! | CAAACTTAATATTTATAAGA+AGG | - | chr2_3:54806909-54806928 | None:intergenic | 15.0% |
!! | CTTCTTATAAATATTAAGTT+TGG | + | chr2_3:54806907-54806926 | Msa0299640:intron | 15.0% |
!!! | AGAGTTTCATATTTTTATAA+AGG | + | chr2_3:54808678-54808697 | Msa0299640:intron | 15.0% |
!!! | GTCAAATTTTATTTTCTTTT+CGG | - | chr2_3:54808761-54808780 | None:intergenic | 15.0% |
!!! | ATTTGACTTAAATTTTTAAC+GGG | - | chr2_3:54808845-54808864 | None:intergenic | 15.0% |
!!! | GATTTGACTTAAATTTTTAA+CGG | - | chr2_3:54808846-54808865 | None:intergenic | 15.0% |
!!! | TTCTAAAAAATTACTTGTTT+TGG | - | chr2_3:54809197-54809216 | None:intergenic | 15.0% |
!!! | GGTTTTTCATATTTTATAAT+AGG | - | chr2_3:54809706-54809725 | None:intergenic | 15.0% |
!!! | CACATATTTTAATTTTATTC+TGG | - | chr2_3:54809728-54809747 | None:intergenic | 15.0% |
!!! | ACGAGTTTATATTTTTTAAA+TGG | + | chr2_3:54809866-54809885 | Msa0299640:intron | 15.0% |
!! | TAGTCCATATTTATTTATTT+AGG | + | chr2_3:54809948-54809967 | Msa0299640:intron | 15.0% |
!! | AGTCCATATTTATTTATTTA+GGG | + | chr2_3:54809949-54809968 | Msa0299640:intron | 15.0% |
!!! | GTTTTATAGGTATTTTTTTA+GGG | - | chr2_3:54810361-54810380 | None:intergenic | 15.0% |
!!! | AGTAATACAAATTTTTCAAT+TGG | + | chr2_3:54810938-54810957 | Msa0299640:CDS | 15.0% |
!! | TAAAAGAAGAAAGAAAACAA+AGG | - | chr2_3:54801104-54801123 | None:intergenic | 20.0% |
!! | AAGAAAAGTTTATGATATGA+GGG | - | chr2_3:54801257-54801276 | None:intergenic | 20.0% |
!! | AATATCTTTCATTAATGGTA+TGG | + | chr2_3:54801699-54801718 | Msa0299640:intron | 20.0% |
!!! | AGATAAAGTACTAAATAGTA+AGG | + | chr2_3:54801780-54801799 | Msa0299640:intron | 20.0% |
!!! | GATAAAGTACTAAATAGTAA+GGG | + | chr2_3:54801781-54801800 | Msa0299640:intron | 20.0% |
!! | TATTGTAAAGTGACATAATT+TGG | + | chr2_3:54801839-54801858 | Msa0299640:intron | 20.0% |
!! | AAATTTCAATTACTTCTATC+AGG | + | chr2_3:54802076-54802095 | Msa0299640:intron | 20.0% |
!! | TTGATGTTAAATCAGTTATA+AGG | + | chr2_3:54802496-54802515 | Msa0299640:CDS | 20.0% |
!! | TAAAATAGTCTGTAACTTTA+CGG | + | chr2_3:54803339-54803358 | Msa0299640:intron | 20.0% |
!!! | ATATATGTAGTTTCCAATTT+TGG | - | chr2_3:54803646-54803665 | None:intergenic | 20.0% |
!!! | ACAATGAGATCTTTTTTAAT+TGG | + | chr2_3:54803867-54803886 | Msa0299640:intron | 20.0% |
!!! | ATTTTATCTCATTTTAGACT+GGG | - | chr2_3:54804006-54804025 | None:intergenic | 20.0% |
!!! | AATTTTATCTCATTTTAGAC+TGG | - | chr2_3:54804007-54804026 | None:intergenic | 20.0% |
!!! | GTAATAATATTTTACCACAA+TGG | + | chr2_3:54804034-54804053 | Msa0299640:intron | 20.0% |
!! | AATTGATTGATTATAAAGAG+TGG | - | chr2_3:54804373-54804392 | None:intergenic | 20.0% |
!! | TCAGTTTAGTGTTTAATATA+GGG | - | chr2_3:54804454-54804473 | None:intergenic | 20.0% |
!! | TACACAAAAGAAAATCAAAA+CGG | + | chr2_3:54804708-54804727 | Msa0299640:intron | 20.0% |
!! | AAAAAAACCAAAACAACTAT+TGG | - | chr2_3:54804928-54804947 | None:intergenic | 20.0% |
!!! | TGTTTTGGTTTTTTTTTTTG+AGG | + | chr2_3:54804933-54804952 | Msa0299640:intron | 20.0% |
!!! | GTTTTGGTTTTTTTTTTTGA+GGG | + | chr2_3:54804934-54804953 | Msa0299640:intron | 20.0% |
!!! | TTTTGGTTTTTTTTTTTGAG+GGG | + | chr2_3:54804935-54804954 | Msa0299640:intron | 20.0% |
!!! | GCTGTTTTGTAATAAAAAAA+GGG | - | chr2_3:54805269-54805288 | None:intergenic | 20.0% |
!!! | TGCTGTTTTGTAATAAAAAA+AGG | - | chr2_3:54805270-54805289 | None:intergenic | 20.0% |
!!! | AACAATATTTTTGTTTGTGT+AGG | + | chr2_3:54805627-54805646 | Msa0299640:intron | 20.0% |
!!! | AGAAACTAAGAATTGTTTTA+TGG | + | chr2_3:54806014-54806033 | Msa0299640:intron | 20.0% |
!! | AAATATTAGTAATGAGTTGT+TGG | + | chr2_3:54806082-54806101 | Msa0299640:intron | 20.0% |
!!! | AAAACAACACCTATAATTTT+GGG | - | chr2_3:54806303-54806322 | None:intergenic | 20.0% |
!! | ATAAGCACTTAAAATTGTAT+TGG | - | chr2_3:54806373-54806392 | None:intergenic | 20.0% |
!!! | TAATAAGACTCTTTTGATTA+AGG | + | chr2_3:54806541-54806560 | Msa0299640:intron | 20.0% |
!! | GAAGAAGAAATAAATGATTA+TGG | - | chr2_3:54806806-54806825 | None:intergenic | 20.0% |
!! | TTGATGTTAAATCTGTTATA+AGG | + | chr2_3:54807007-54807026 | Msa0299640:CDS | 20.0% |
!! | CAACTTAAAATTCTCTTTAA+TGG | + | chr2_3:54807229-54807248 | Msa0299640:intron | 20.0% |
!! | TTAAAATTCTCTTTAATGGA+TGG | + | chr2_3:54807233-54807252 | Msa0299640:intron | 20.0% |
!! | ATATTCTGTAAACAATTTGA+TGG | - | chr2_3:54807421-54807440 | None:intergenic | 20.0% |
!! | ATATAAATGATTTCTAAGTC+TGG | - | chr2_3:54807685-54807704 | None:intergenic | 20.0% |
!!! | ATCATATACTTTGTTTATCA+AGG | - | chr2_3:54807774-54807793 | None:intergenic | 20.0% |
!! | TTGAAATTACTTATTGGAAA+GGG | - | chr2_3:54807914-54807933 | None:intergenic | 20.0% |
!! | TCTCTATTATTAAGATGTTA+CGG | - | chr2_3:54808081-54808100 | None:intergenic | 20.0% |
!! | AATAATAGAGACTAAATTGA+CGG | + | chr2_3:54808090-54808109 | Msa0299640:intron | 20.0% |
!!! | CTAAAATTTTATAAGCAACT+GGG | + | chr2_3:54808333-54808352 | Msa0299640:intron | 20.0% |
!! | GATATATATCTCATTTATGT+TGG | + | chr2_3:54808431-54808450 | Msa0299640:intron | 20.0% |
!! | TTTAAAAAAAAATCGACGAA+TGG | - | chr2_3:54808646-54808665 | None:intergenic | 20.0% |
!! | AACTAAATTAATTAGATGCT+AGG | - | chr2_3:54809105-54809124 | None:intergenic | 20.0% |
!! | GTAACATCACTATTAAATTT+AGG | + | chr2_3:54809132-54809151 | Msa0299640:intron | 20.0% |
!!! | TGTATATTTTAACATAAGAG+GGG | - | chr2_3:54809409-54809428 | None:intergenic | 20.0% |
!!! | CTGTATATTTTAACATAAGA+GGG | - | chr2_3:54809410-54809429 | None:intergenic | 20.0% |
!!! | ACTGTATATTTTAACATAAG+AGG | - | chr2_3:54809411-54809430 | None:intergenic | 20.0% |
!!! | CTAATATGTTTTGAATAAGA+GGG | - | chr2_3:54809440-54809459 | None:intergenic | 20.0% |
!!! | TCTAATATGTTTTGAATAAG+AGG | - | chr2_3:54809441-54809460 | None:intergenic | 20.0% |
!! | CATATTTATTTATTTAGGGA+GGG | + | chr2_3:54809953-54809972 | Msa0299640:intron | 20.0% |
!! | ATATTTATTTATTTAGGGAG+GGG | + | chr2_3:54809954-54809973 | Msa0299640:intron | 20.0% |
!! | ATTATATACAAATTCAGTAG+TGG | - | chr2_3:54810225-54810244 | None:intergenic | 20.0% |
!!! | GGTTTTATAGGTATTTTTTT+AGG | - | chr2_3:54810362-54810381 | None:intergenic | 20.0% |
!! | TTCTAATTTCATCAAAAGTA+GGG | - | chr2_3:54812125-54812144 | None:intergenic | 20.0% |
!! | ATTCTAATTTCATCAAAAGT+AGG | - | chr2_3:54812126-54812145 | None:intergenic | 20.0% |
! | CAAGAAAAGTTTATGATATG+AGG | - | chr2_3:54801258-54801277 | None:intergenic | 25.0% |
!!! | ACAATGTTTTTTATTTGTGC+AGG | + | chr2_3:54801307-54801326 | Msa0299640:intron | 25.0% |
!! | AAGGATCTTTTAGATACATT+AGG | + | chr2_3:54801511-54801530 | Msa0299640:intron | 25.0% |
! | TGTTAGAGTGACATATAATT+TGG | - | chr2_3:54801611-54801630 | None:intergenic | 25.0% |
! | TAAATAGTAAGGGACATAAT+AGG | + | chr2_3:54801791-54801810 | Msa0299640:intron | 25.0% |
! | GAGTGACATATAATTTAGAA+TGG | + | chr2_3:54801880-54801899 | Msa0299640:intron | 25.0% |
!! | TGACATATAATTTAGAATGG+AGG | + | chr2_3:54801883-54801902 | Msa0299640:intron | 25.0% |
!! | GACATATAATTTAGAATGGA+GGG | + | chr2_3:54801884-54801903 | Msa0299640:intron | 25.0% |
! | ATAGAAGAAAAAAATGTGAG+AGG | + | chr2_3:54802018-54802037 | Msa0299640:intron | 25.0% |
! | TTGTTTATATCTAAGTCTAG+AGG | - | chr2_3:54802315-54802334 | None:intergenic | 25.0% |
! | ACTATTGAGTAAACTAATTC+AGG | + | chr2_3:54802440-54802459 | Msa0299640:intron | 25.0% |
!! | TAACTGATTTAACATCAAAG+CGG | - | chr2_3:54802494-54802513 | None:intergenic | 25.0% |
!!! | TATTCTCTTTTCTAAAAGTG+AGG | + | chr2_3:54802527-54802546 | Msa0299640:CDS | 25.0% |
! | TTGTAATTTGATTACCTGTA+TGG | - | chr2_3:54802693-54802712 | None:intergenic | 25.0% |
!!! | CAAGTAGCCTTATAATTATT+TGG | - | chr2_3:54802967-54802986 | None:intergenic | 25.0% |
!! | TTTTGGTCCTTAAATGTATT+AGG | + | chr2_3:54803019-54803038 | Msa0299640:intron | 25.0% |
! | GAAAATGCCTAATACATTTA+AGG | - | chr2_3:54803029-54803048 | None:intergenic | 25.0% |
!!! | ATTTTGATTAATTTGAGGAC+CGG | - | chr2_3:54803053-54803072 | None:intergenic | 25.0% |
! | GTTAATTTAGTCCTGAAATA+TGG | + | chr2_3:54803133-54803152 | Msa0299640:intron | 25.0% |
! | ACTGATAAAAACCATATTTC+AGG | - | chr2_3:54803147-54803166 | None:intergenic | 25.0% |
! | TTTGTACTTTCAATACTTTC+AGG | + | chr2_3:54803214-54803233 | Msa0299640:intron | 25.0% |
! | CAATGAGTAAACAGTAATAT+TGG | - | chr2_3:54803273-54803292 | None:intergenic | 25.0% |
! | GACTTAATACAAAAAAAAGG+AGG | - | chr2_3:54803302-54803321 | None:intergenic | 25.0% |
! | AAAATAGTCTGTAACTTTAC+GGG | + | chr2_3:54803340-54803359 | Msa0299640:intron | 25.0% |
!! | GAAAAATTTTGTGCCAAAAT+TGG | + | chr2_3:54803630-54803649 | Msa0299640:intron | 25.0% |
! | ACTTTACTCTTTAACTCTTT+CGG | + | chr2_3:54803951-54803970 | Msa0299640:intron | 25.0% |
!!! | TAAGATTTGTTAAGTGATTC+TGG | - | chr2_3:54803978-54803997 | None:intergenic | 25.0% |
! | TTATAATCAATCAATTGAGC+TGG | + | chr2_3:54804377-54804396 | Msa0299640:intron | 25.0% |
! | GGGTCAATTAAAATAAATTG+TGG | - | chr2_3:54804434-54804453 | None:intergenic | 25.0% |
! | GTCAGTTTAGTGTTTAATAT+AGG | - | chr2_3:54804455-54804474 | None:intergenic | 25.0% |
! | ATATGGAGTTTCAAATTGAA+TGG | + | chr2_3:54804538-54804557 | Msa0299640:intron | 25.0% |
! | CAATGCAGATATTGATAAAT+TGG | - | chr2_3:54804625-54804644 | None:intergenic | 25.0% |
! | TAATATAGACTCTCACAATA+TGG | + | chr2_3:54804758-54804777 | Msa0299640:intron | 25.0% |
! | AATGGTAAGAAATTAAAACG+TGG | - | chr2_3:54805244-54805263 | None:intergenic | 25.0% |
! | TGTAATAAAAAAAGGGTCAA+TGG | - | chr2_3:54805262-54805281 | None:intergenic | 25.0% |
! | AAAAGAGAAAAAGTCAACAA+AGG | - | chr2_3:54805436-54805455 | None:intergenic | 25.0% |
!! | AAGGATCTTTTAGATACATT+AGG | + | chr2_3:54801511-54801530 | Msa0299640:intron | 25.0% |
!! | TGAAGTATGTACAGAAATTT+TGG | - | chr2_3:54805939-54805958 | None:intergenic | 25.0% |
! | ATAAGTGTTAAGAGAGATAA+TGG | - | chr2_3:54806252-54806271 | None:intergenic | 25.0% |
!! | GAAAACAACACCTATAATTT+TGG | - | chr2_3:54806304-54806323 | None:intergenic | 25.0% |
! | TGTTTATGTCTTGTACAATT+CGG | + | chr2_3:54806462-54806481 | Msa0299640:intron | 25.0% |
! | GTTGATTGTAAAATTTGTGT+CGG | + | chr2_3:54806490-54806509 | Msa0299640:intron | 25.0% |
!!! | CAATTTTAATTGCTTCTATC+AGG | + | chr2_3:54806596-54806615 | Msa0299640:intron | 25.0% |
!! | GACAAAAAAGTACATATATC+CGG | + | chr2_3:54806850-54806869 | Msa0299640:intron | 25.0% |
!!! | TATTTGGTTCAAATTTTGAC+CGG | - | chr2_3:54806872-54806891 | None:intergenic | 25.0% |
!! | GGAAAAAAAGTACATGTATT+TGG | - | chr2_3:54806888-54806907 | None:intergenic | 25.0% |
! | ACTATTGAGTAAACTAATTC+AGG | + | chr2_3:54802440-54802459 | Msa0299640:intron | 25.0% |
!!! | TATACTCTTTTCTAAAACTG+AGG | + | chr2_3:54807038-54807057 | Msa0299640:CDS | 25.0% |
!!! | CATTTACTTTAGGATCAATT+AGG | - | chr2_3:54807567-54807586 | None:intergenic | 25.0% |
! | GAAATCATTTATATTCCAGA+AGG | + | chr2_3:54807691-54807710 | Msa0299640:CDS | 25.0% |
! | AAAGTATATGATTGTGATTG+TGG | + | chr2_3:54807782-54807801 | Msa0299640:intron | 25.0% |
! | GTTGAAATTACTTATTGGAA+AGG | - | chr2_3:54807915-54807934 | None:intergenic | 25.0% |
! | GAGTTGTTGAAATTACTTAT+TGG | - | chr2_3:54807920-54807939 | None:intergenic | 25.0% |
!! | TTGACGGATAAAAAAACTTA+AGG | + | chr2_3:54808106-54808125 | Msa0299640:intron | 25.0% |
!! | TGACGGATAAAAAAACTTAA+GGG | + | chr2_3:54808107-54808126 | Msa0299640:intron | 25.0% |
! | AAAAACTTAAGGGACTAAAT+CGG | + | chr2_3:54808117-54808136 | Msa0299640:intron | 25.0% |
! | CTAAAATCAGCTTTACATAT+TGG | + | chr2_3:54808174-54808193 | Msa0299640:intron | 25.0% |
! | AATTCATGTTATCAGCATTT+AGG | - | chr2_3:54808258-54808277 | None:intergenic | 25.0% |
! | TAAATGCTGATAACATGAAT+TGG | + | chr2_3:54808257-54808276 | Msa0299640:intron | 25.0% |
!! | CAGTGTTTTCAACAAATTTA+TGG | + | chr2_3:54808284-54808303 | Msa0299640:intron | 25.0% |
!! | CCAGTTGCTTATAAAATTTT+AGG | - | chr2_3:54808335-54808354 | None:intergenic | 25.0% |
!! | CCTAAAATTTTATAAGCAAC+TGG | + | chr2_3:54808332-54808351 | Msa0299640:intron | 25.0% |
!!! | TTAATAAAGTTCTAGACAAG+AGG | - | chr2_3:54808406-54808425 | None:intergenic | 25.0% |
!! | TCATTTTACAACTGTTTGTA+GGG | - | chr2_3:54808592-54808611 | None:intergenic | 25.0% |
!! | ATCATTTTACAACTGTTTGT+AGG | - | chr2_3:54808593-54808612 | None:intergenic | 25.0% |
!!! | TTTTGTTTGTACTACTTGAT+AGG | - | chr2_3:54808945-54808964 | None:intergenic | 25.0% |
! | ATTAATTAGATGCTAGGAAA+AGG | - | chr2_3:54809099-54809118 | None:intergenic | 25.0% |
! | TTAAAGAAAAATAGCATTGC+AGG | + | chr2_3:54809599-54809618 | Msa0299640:intron | 25.0% |
! | TTACTAAAGTCGATTAAGTA+TGG | + | chr2_3:54809753-54809772 | Msa0299640:intron | 25.0% |
! | CCTCCCTAAATAAATAAATA+TGG | - | chr2_3:54809955-54809974 | None:intergenic | 25.0% |
! | CCATATTTATTTATTTAGGG+AGG | + | chr2_3:54809952-54809971 | Msa0299640:intron | 25.0% |
! | TATTTATTTATTTAGGGAGG+GGG | + | chr2_3:54809955-54809974 | Msa0299640:intron | 25.0% |
! | TGTAATTCAAGCATCTTATA+AGG | + | chr2_3:54809979-54809998 | Msa0299640:intron | 25.0% |
! | GTAATTCAAGCATCTTATAA+GGG | + | chr2_3:54809980-54809999 | Msa0299640:intron | 25.0% |
!!! | AGTGTATATTTTAACATCAG+AGG | + | chr2_3:54810037-54810056 | Msa0299640:intron | 25.0% |
!! | AGTGTAATTCAAGCATTTTT+GGG | + | chr2_3:54810067-54810086 | Msa0299640:intron | 25.0% |
! | TCCAAAAACATTATCCTAAT+TGG | + | chr2_3:54810257-54810276 | Msa0299640:intron | 25.0% |
!! | TCCAATTAGGATAATGTTTT+TGG | - | chr2_3:54810261-54810280 | None:intergenic | 25.0% |
!! | AATCCTAACAACCATATTTT+TGG | + | chr2_3:54810554-54810573 | Msa0299640:intron | 25.0% |
! | GATACTAATGATAATCATGT+TGG | + | chr2_3:54810614-54810633 | Msa0299640:intron | 25.0% |
!! | TTTGTTTCTCATATAGAGAA+TGG | - | chr2_3:54811092-54811111 | None:intergenic | 25.0% |
! | ATTCTCTATATGAGAAACAA+AGG | + | chr2_3:54811091-54811110 | Msa0299640:intron | 25.0% |
!! | GGAACAAAAGTGTATATAAA+GGG | + | chr2_3:54811227-54811246 | Msa0299640:intron | 25.0% |
! | CTGAAACATAGAAATTTAGT+AGG | + | chr2_3:54811343-54811362 | Msa0299640:intron | 25.0% |
! | GTTTATGACTTCATGAATAA+TGG | + | chr2_3:54811409-54811428 | Msa0299640:intron | 25.0% |
!! | ATAATGGAAGTTTAGACAAA+TGG | + | chr2_3:54811425-54811444 | Msa0299640:intron | 25.0% |
ACACATGTAGTAAATGAGTT+AGG | + | chr2_3:54801060-54801079 | Msa0299640:five_prime_UTR | 30.0% | |
GTGTGTATGATTGAGTTATA+TGG | - | chr2_3:54801128-54801147 | None:intergenic | 30.0% | |
!! | TTTTATTTGTGCAGGTGAAA+AGG | + | chr2_3:54801315-54801334 | Msa0299640:intron | 30.0% |
TCCAAGTATACCATATTTCT+GGG | - | chr2_3:54801363-54801382 | None:intergenic | 30.0% | |
TAAAATCAAAGGCAATAGCA+CGG | - | chr2_3:54801420-54801439 | None:intergenic | 30.0% | |
AGATACATTAGGTATCAACA+AGG | + | chr2_3:54801522-54801541 | Msa0299640:intron | 30.0% | |
AGGAGTAACATTATTGTACT+AGG | - | chr2_3:54801582-54801601 | None:intergenic | 30.0% | |
! | GACATATAATTTGGAACGAA+AGG | - | chr2_3:54801602-54801621 | None:intergenic | 30.0% |
TATGTTCACAAGATTACACT+TGG | + | chr2_3:54801954-54801973 | Msa0299640:intron | 30.0% | |
AGAAAAAAATGTGAGAGGAA+AGG | + | chr2_3:54802023-54802042 | Msa0299640:intron | 30.0% | |
TTCTATCAGGCTATCATTAT+TGG | + | chr2_3:54802089-54802108 | Msa0299640:intron | 30.0% | |
ATCATTATTGGTAAGGACTT+TGG | + | chr2_3:54802101-54802120 | Msa0299640:CDS | 30.0% | |
AGGTGATAATCAAGAAATCA+TGG | + | chr2_3:54802560-54802579 | Msa0299640:CDS | 30.0% | |
GCATCACTATATGAAAAATC+TGG | + | chr2_3:54802645-54802664 | Msa0299640:CDS | 30.0% | |
ATTCATATCATTCAAATCCG+AGG | - | chr2_3:54802814-54802833 | None:intergenic | 30.0% | |
! | ACTAACTTTTGCCGATAAAT+CGG | - | chr2_3:54802889-54802908 | None:intergenic | 30.0% |
! | AATGTATTAGGCATTTTCAC+CGG | + | chr2_3:54803031-54803050 | Msa0299640:intron | 30.0% |
TATTGGTCACTAAGTATGTA+AGG | - | chr2_3:54803256-54803275 | None:intergenic | 30.0% | |
!!! | TACAGACTATTTTAGAGCAT+TGG | - | chr2_3:54803333-54803352 | None:intergenic | 30.0% |
AAATAGTCTGTAACTTTACG+GGG | + | chr2_3:54803341-54803360 | Msa0299640:intron | 30.0% | |
!! | CATTTACTTTAGGATCAGTT+AGG | - | chr2_3:54803428-54803447 | None:intergenic | 30.0% |
GAAACTACATATATTCCAGA+AGG | + | chr2_3:54803652-54803671 | Msa0299640:intron | 30.0% | |
CTCGAATTACTTATTGGAAT+GGG | - | chr2_3:54803803-54803822 | None:intergenic | 30.0% | |
TTCTTGCTCGAATTACTTAT+TGG | - | chr2_3:54803809-54803828 | None:intergenic | 30.0% | |
GTTAGCATTATGTTGTAGAT+TGG | + | chr2_3:54803904-54803923 | Msa0299640:intron | 30.0% | |
ACTCAACATGTGTAAAAGTA+TGG | - | chr2_3:54804300-54804319 | None:intergenic | 30.0% | |
! | CTTTTACACATGTTGAGTTT+TGG | + | chr2_3:54804302-54804321 | Msa0299640:intron | 30.0% |
!! | ACTTTAAAAGTTGTTTCTCC+AGG | + | chr2_3:54804503-54804522 | Msa0299640:intron | 30.0% |
AATAACTTCTTAGTCGAGAT+CGG | - | chr2_3:54805184-54805203 | None:intergenic | 30.0% | |
GTAAGAAATTAAAACGTGGT+TGG | - | chr2_3:54805240-54805259 | None:intergenic | 30.0% | |
TACATGGATTTCCAGAAATA+TGG | + | chr2_3:54805670-54805689 | Msa0299640:CDS | 30.0% | |
TTCCAGAAATATGGTATACA+TGG | + | chr2_3:54805679-54805698 | Msa0299640:CDS | 30.0% | |
ACCAGAAAAAGCAACTATAA+TGG | + | chr2_3:54805791-54805810 | Msa0299640:CDS | 30.0% | |
!!! | TCCATTATAGTTGCTTTTTC+TGG | - | chr2_3:54805795-54805814 | None:intergenic | 30.0% |
AGATACATTAGGTATCAACA+AGG | + | chr2_3:54801522-54801541 | Msa0299640:intron | 30.0% | |
TATGTTGGAGATACTATACT+AGG | - | chr2_3:54805902-54805921 | None:intergenic | 30.0% | |
ACTTCAGCTTAGATATAATC+AGG | + | chr2_3:54805953-54805972 | Msa0299640:intron | 30.0% | |
AGCACAAAACTTATGATCAA+AGG | + | chr2_3:54806114-54806133 | Msa0299640:intron | 30.0% | |
!! | CTATAATTTTGGGAGTGATA+GGG | - | chr2_3:54806293-54806312 | None:intergenic | 30.0% |
!!! | GTGTTGTTTTCCACTAAAAT+CGG | + | chr2_3:54806313-54806332 | Msa0299640:intron | 30.0% |
ATGAAAGTTGAGATTTCAGA+GGG | + | chr2_3:54806337-54806356 | Msa0299640:intron | 30.0% | |
!!! | AACGTTGTCTGATAGTTTTT+TGG | + | chr2_3:54806568-54806587 | Msa0299640:intron | 30.0% |
! | TAGTAATGTAGAAGCCTTTT+GGG | - | chr2_3:54806761-54806780 | None:intergenic | 30.0% |
AAGTGATGATCAAGAAATCA+TGG | + | chr2_3:54807071-54807090 | Msa0299640:CDS | 30.0% | |
GCATCACTATATGAAAAATC+TGG | + | chr2_3:54802645-54802664 | Msa0299640:CDS | 30.0% | |
CTGTAAACAATTTGATGGAA+GGG | - | chr2_3:54807416-54807435 | None:intergenic | 30.0% | |
TCTGTAAACAATTTGATGGA+AGG | - | chr2_3:54807417-54807436 | None:intergenic | 30.0% | |
AAAATAATTTCCATGTGTGC+TGG | + | chr2_3:54807847-54807866 | Msa0299640:intron | 30.0% | |
AGTAATTTCAACAACTCTGT+AGG | + | chr2_3:54807923-54807942 | Msa0299640:intron | 30.0% | |
TTCATGAGTATAGTGATAAG+AGG | - | chr2_3:54807986-54808005 | None:intergenic | 30.0% | |
! | TCAATTATTGGTTGAGTGAT+TGG | - | chr2_3:54808019-54808038 | None:intergenic | 30.0% |
AGGAAGTTCATCTCAATTAT+TGG | - | chr2_3:54808031-54808050 | None:intergenic | 30.0% | |
!! | AAAGCTGATTTTAGTCCTTA+AGG | - | chr2_3:54808168-54808187 | None:intergenic | 30.0% |
AGCATTTAGGAGAAGATATA+AGG | - | chr2_3:54808245-54808264 | None:intergenic | 30.0% | |
GTGTAACTCTTCATTAAACT+TGG | - | chr2_3:54808513-54808532 | None:intergenic | 30.0% | |
! | CATTTTACAACTGTTTGTAG+GGG | - | chr2_3:54808591-54808610 | None:intergenic | 30.0% |
ACGTGAATTTGAATCTTAAC+AGG | - | chr2_3:54808795-54808814 | None:intergenic | 30.0% | |
TGATAGGTTTCAATGCAAAT+GGG | - | chr2_3:54808929-54808948 | None:intergenic | 30.0% | |
TTGATAGGTTTCAATGCAAA+TGG | - | chr2_3:54808930-54808949 | None:intergenic | 30.0% | |
TCAAATGCCGTGTATTAATT+TGG | - | chr2_3:54808980-54808999 | None:intergenic | 30.0% | |
GTATGTACACTTGACTTTAT+AGG | - | chr2_3:54809016-54809035 | None:intergenic | 30.0% | |
TGTAATTCAAGCATCTTTGA+GGG | - | chr2_3:54809379-54809398 | None:intergenic | 30.0% | |
!!! | TATTTTAACATAAGAGGGGA+GGG | - | chr2_3:54809405-54809424 | None:intergenic | 30.0% |
!!! | ATATTTTAACATAAGAGGGG+AGG | - | chr2_3:54809406-54809425 | None:intergenic | 30.0% |
!! | ATGTTTTGAATAAGAGGGAA+GGG | - | chr2_3:54809435-54809454 | None:intergenic | 30.0% |
!! | TATGTTTTGAATAAGAGGGA+AGG | - | chr2_3:54809436-54809455 | None:intergenic | 30.0% |
CGTAGATTTAAACTTAAGAG+GGG | - | chr2_3:54809512-54809531 | None:intergenic | 30.0% | |
GCGTAGATTTAAACTTAAGA+GGG | - | chr2_3:54809513-54809532 | None:intergenic | 30.0% | |
AGCGTAGATTTAAACTTAAG+AGG | - | chr2_3:54809514-54809533 | None:intergenic | 30.0% | |
ATTTATTTATTTAGGGAGGG+GGG | + | chr2_3:54809956-54809975 | Msa0299640:intron | 30.0% | |
! | GAGTGTAATTCAAGCATTTT+TGG | + | chr2_3:54810066-54810085 | Msa0299640:intron | 30.0% |
! | GTGTAATTCAAGCATTTTTG+GGG | + | chr2_3:54810068-54810087 | Msa0299640:intron | 30.0% |
!! | TGTAATTCAAGCATTTTTGG+GGG | + | chr2_3:54810069-54810088 | Msa0299640:intron | 30.0% |
TAATGGTTGCATTTCCAATT+AGG | - | chr2_3:54810274-54810293 | None:intergenic | 30.0% | |
!! | AGTGAGAATGGATTTGTTAA+TGG | - | chr2_3:54810291-54810310 | None:intergenic | 30.0% |
AAATGAAGGAAGTAGCAAAT+GGG | - | chr2_3:54810406-54810425 | None:intergenic | 30.0% | |
AAAATGAAGGAAGTAGCAAA+TGG | - | chr2_3:54810407-54810426 | None:intergenic | 30.0% | |
TGTGATAAAGTTCTTGATTG+GGG | - | chr2_3:54810438-54810457 | None:intergenic | 30.0% | |
CTGTGATAAAGTTCTTGATT+GGG | - | chr2_3:54810439-54810458 | None:intergenic | 30.0% | |
ACTCCAAAAATATGGTTGTT+AGG | - | chr2_3:54810560-54810579 | None:intergenic | 30.0% | |
CGAATTCAACTCCAAAAATA+TGG | - | chr2_3:54810568-54810587 | None:intergenic | 30.0% | |
TTAAGATTCATGCTGATAAG+AGG | - | chr2_3:54810824-54810843 | None:intergenic | 30.0% | |
ATAGTGTTAAGATTCTTGCT+TGG | + | chr2_3:54810909-54810928 | Msa0299640:CDS | 30.0% | |
CAAAAAACCATCCTTTATGA+GGG | - | chr2_3:54811000-54811019 | None:intergenic | 30.0% | |
AGAAGAAGAAATTGAAGACT+GGG | + | chr2_3:54811114-54811133 | Msa0299640:intron | 30.0% | |
! | GGGAACAAAAGTGTATATAA+AGG | + | chr2_3:54811226-54811245 | Msa0299640:intron | 30.0% |
! | GTATATAAAGGGATTTTGCA+AGG | + | chr2_3:54811238-54811257 | Msa0299640:intron | 30.0% |
AGAAATTTAGTAGGATTCAG+AGG | + | chr2_3:54811352-54811371 | Msa0299640:intron | 30.0% | |
!! | TTTTGAAAAATGTAGCCACA+GGG | + | chr2_3:54811500-54811519 | Msa0299640:intron | 30.0% |
AAGGATATGAATGCTAGATT+GGG | + | chr2_3:54811598-54811617 | Msa0299640:intron | 30.0% | |
TTCACAATCTGTCTCATTAT+TGG | - | chr2_3:54811976-54811995 | None:intergenic | 30.0% | |
ACAGATTGTGAAAATGTTAC+AGG | + | chr2_3:54811984-54812003 | Msa0299640:CDS | 30.0% | |
CAGATTGTGAAAATGTTACA+GGG | + | chr2_3:54811985-54812004 | Msa0299640:CDS | 30.0% | |
CGAATCTGATGAAGAAAATA+TGG | + | chr2_3:54812023-54812042 | Msa0299640:CDS | 30.0% | |
GATGAAGAAAATATGGAGAA+AGG | + | chr2_3:54812030-54812049 | Msa0299640:CDS | 30.0% | |
AATATGGAGAAAGGTTTACT+TGG | + | chr2_3:54812039-54812058 | Msa0299640:CDS | 30.0% | |
TCCCAGAAATATGGTATACT+TGG | + | chr2_3:54801359-54801378 | Msa0299640:CDS | 35.0% | |
CTCCAAGTATACCATATTTC+TGG | - | chr2_3:54801364-54801383 | None:intergenic | 35.0% | |
!! | GCTATTGCCTTTGATTTTAG+AGG | + | chr2_3:54801421-54801440 | Msa0299640:CDS | 35.0% |
!! | TCCATAGCCTCTAAAATCAA+AGG | - | chr2_3:54801431-54801450 | None:intergenic | 35.0% |
! | TCCATTAAAGTTGCCTTTTC+CGG | - | chr2_3:54801475-54801494 | None:intergenic | 35.0% |
!! | GAACAAGACACTTTTGACTA+AGG | + | chr2_3:54802051-54802070 | Msa0299640:intron | 35.0% |
TCAGGCTATCATTATTGGTA+AGG | + | chr2_3:54802094-54802113 | Msa0299640:intron | 35.0% | |
!!! | ATGACAGAAGCTACTTTTTC+TGG | - | chr2_3:54802161-54802180 | None:intergenic | 35.0% |
GTAGCTTCTGTCATAACTTT+AGG | + | chr2_3:54802167-54802186 | Msa0299640:CDS | 35.0% | |
!! | CTTTTGGAAGAAGATGGTTT+TGG | - | chr2_3:54802226-54802245 | None:intergenic | 35.0% |
CAAAACCATCTTCTTCCAAA+AGG | + | chr2_3:54802224-54802243 | Msa0299640:CDS | 35.0% | |
GTATCTGATTCCATTTGAAC+AGG | + | chr2_3:54802346-54802365 | Msa0299640:intron | 35.0% | |
ACATGTCTATCCTGTTCAAA+TGG | - | chr2_3:54802359-54802378 | None:intergenic | 35.0% | |
GAACAGGATAGACATGTTTA+AGG | + | chr2_3:54802362-54802381 | Msa0299640:intron | 35.0% | |
ATTTCTGCATTGCATTACGT+TGG | + | chr2_3:54802752-54802771 | Msa0299640:intron | 35.0% | |
GAATCACTTAAACAAGACCT+CGG | + | chr2_3:54802794-54802813 | Msa0299640:intron | 35.0% | |
GAATAGAAAATGTAGTTGCG+AGG | + | chr2_3:54802830-54802849 | Msa0299640:intron | 35.0% | |
! | TAACTTTTGCCGATAAATCG+GGG | - | chr2_3:54802887-54802906 | None:intergenic | 35.0% |
! | CTAACTTTTGCCGATAAATC+GGG | - | chr2_3:54802888-54802907 | None:intergenic | 35.0% |
GATTTATCGGCAAAAGTTAG+TGG | + | chr2_3:54802888-54802907 | Msa0299640:intron | 35.0% | |
ACTAGCATAACATACACTCA+AGG | + | chr2_3:54803186-54803205 | Msa0299640:intron | 35.0% | |
GAAAACATTATGATCCACAC+AGG | + | chr2_3:54803382-54803401 | Msa0299640:intron | 35.0% | |
GACTATTGTTTCAACTTTCC+TGG | + | chr2_3:54803477-54803496 | Msa0299640:intron | 35.0% | |
GGAATTGTTCATGCACAAAA+TGG | - | chr2_3:54803681-54803700 | None:intergenic | 35.0% | |
!! | ATCATACGCTTTGTTTGTCA+AGG | - | chr2_3:54803735-54803754 | None:intergenic | 35.0% |
CAAAGCGTATGATTTGATTG+TGG | + | chr2_3:54803742-54803761 | Msa0299640:intron | 35.0% | |
GAATTACTTATTGGAATGGG+AGG | - | chr2_3:54803800-54803819 | None:intergenic | 35.0% | |
GCTCGAATTACTTATTGGAA+TGG | - | chr2_3:54803804-54803823 | None:intergenic | 35.0% | |
! | TGGTAATTTTCGCATTGTGA+GGG | - | chr2_3:54804280-54804299 | None:intergenic | 35.0% |
! | ATGGTAATTTTCGCATTGTG+AGG | - | chr2_3:54804281-54804300 | None:intergenic | 35.0% |
! | TTTTGGTCTCCTTTCATCAT+CGG | + | chr2_3:54804319-54804338 | Msa0299640:intron | 35.0% |
TCTGCATTGTTAGTTGAGTT+AGG | + | chr2_3:54804636-54804655 | Msa0299640:intron | 35.0% | |
AACCAAAACAACTATTGGCA+TGG | - | chr2_3:54804923-54804942 | None:intergenic | 35.0% | |
! | TTTGAGGGGAATAGTTGTTT+TGG | + | chr2_3:54804949-54804968 | Msa0299640:intron | 35.0% |
GCGCTATAAACATGGTATAT+AGG | + | chr2_3:54804978-54804997 | Msa0299640:intron | 35.0% | |
AATCTTTCTCGTGTCTATTG+AGG | - | chr2_3:54805074-54805093 | None:intergenic | 35.0% | |
! | AAAGCAGTGGTTTTCATACA+TGG | + | chr2_3:54805654-54805673 | Msa0299640:CDS | 35.0% |
CTCCATGTATACCATATTTC+TGG | - | chr2_3:54805684-54805703 | None:intergenic | 35.0% | |
CATTTGCAACAGCAATCATT+TGG | - | chr2_3:54801390-54801409 | None:intergenic | 35.0% | |
TAGAATCAAAGGCAATAGCA+CGG | - | chr2_3:54805740-54805759 | None:intergenic | 35.0% | |
AAAAAACGCTATGATCCTGA+AGG | - | chr2_3:54806050-54806069 | None:intergenic | 35.0% | |
CTGACACATTTGATTAGTGT+CGG | + | chr2_3:54806149-54806168 | Msa0299640:intron | 35.0% | |
!! | CCTATAATTTTGGGAGTGAT+AGG | - | chr2_3:54806294-54806313 | None:intergenic | 35.0% |
CCTATCACTCCCAAAATTAT+AGG | + | chr2_3:54806291-54806310 | Msa0299640:intron | 35.0% | |
!!! | AACTTTCATGCCGATTTTAG+TGG | - | chr2_3:54806326-54806345 | None:intergenic | 35.0% |
CATGAAAGTTGAGATTTCAG+AGG | + | chr2_3:54806336-54806355 | Msa0299640:intron | 35.0% | |
! | CTCATGATCTATGATAGTGT+AGG | + | chr2_3:54806426-54806445 | Msa0299640:intron | 35.0% |
!! | AGGTACAAGATTTGCTACAA+AGG | - | chr2_3:54806649-54806668 | None:intergenic | 35.0% |
! | CTAGTAATGTAGAAGCCTTT+TGG | - | chr2_3:54806762-54806781 | None:intergenic | 35.0% |
CAAAAGGCTTCTACATTACT+AGG | + | chr2_3:54806760-54806779 | Msa0299640:CDS | 35.0% | |
TGAGACTTTGATTACCTGTA+TGG | - | chr2_3:54807204-54807223 | None:intergenic | 35.0% | |
! | ACTACGTTTTTCTTTTGGCA+AGG | - | chr2_3:54807292-54807311 | None:intergenic | 35.0% |
TGCCAAAAGAAAAACGTAGT+TGG | + | chr2_3:54807292-54807311 | Msa0299640:intron | 35.0% | |
GCCAAAAGAAAAACGTAGTT+GGG | + | chr2_3:54807293-54807312 | Msa0299640:intron | 35.0% | |
! | TCCCAACTACGTTTTTCTTT+TGG | - | chr2_3:54807297-54807316 | None:intergenic | 35.0% |
AAAAGAAAAACGTAGTTGGG+AGG | + | chr2_3:54807296-54807315 | Msa0299640:intron | 35.0% | |
AAACTGACTAACCACCTTTA+GGG | - | chr2_3:54807330-54807349 | None:intergenic | 35.0% | |
TAAACTGACTAACCACCTTT+AGG | - | chr2_3:54807331-54807350 | None:intergenic | 35.0% | |
CCAACGTAAAAATGCATTTG+AGG | - | chr2_3:54807356-54807375 | None:intergenic | 35.0% | |
! | CCTCAAATGCATTTTTACGT+TGG | + | chr2_3:54807353-54807372 | Msa0299640:intron | 35.0% |
ATATACACTGTCAATGTGTG+AGG | - | chr2_3:54807480-54807499 | None:intergenic | 35.0% | |
ACATTGTTTATGATCCACAC+AGG | + | chr2_3:54807521-54807540 | Msa0299640:intron | 35.0% | |
AGTGCAGGAACATTTACTTT+AGG | - | chr2_3:54807577-54807596 | None:intergenic | 35.0% | |
TATGATTGTGATTGTGGTTG+TGG | + | chr2_3:54807788-54807807 | Msa0299640:intron | 35.0% | |
GTCTCATGCTTAATGTTGTA+TGG | + | chr2_3:54807824-54807843 | Msa0299640:intron | 35.0% | |
AAGTTTCTTCATCCATCTCA+AGG | + | chr2_3:54808707-54808726 | Msa0299640:intron | 35.0% | |
!! | GGAAGACTTTTTGTTTCTCA+TGG | - | chr2_3:54808888-54808907 | None:intergenic | 35.0% |
GATAGGTTTCAATGCAAATG+GGG | - | chr2_3:54808928-54808947 | None:intergenic | 35.0% | |
TGTGCTGCCAAATTAATACA+CGG | + | chr2_3:54808970-54808989 | Msa0299640:intron | 35.0% | |
ATACACGGCATTTGAATTGA+AGG | + | chr2_3:54808985-54809004 | Msa0299640:intron | 35.0% | |
TACACGGCATTTGAATTGAA+GGG | + | chr2_3:54808986-54809005 | Msa0299640:intron | 35.0% | |
AATGTTAAACAGTGTCCTTG+AGG | + | chr2_3:54809157-54809176 | Msa0299640:intron | 35.0% | |
GTAATTCAAGCATCTTTGAG+GGG | - | chr2_3:54809378-54809397 | None:intergenic | 35.0% | |
GTGTAATTCAAGCATCTTTG+AGG | - | chr2_3:54809380-54809399 | None:intergenic | 35.0% | |
!! | ATTTTAACATAAGAGGGGAG+GGG | - | chr2_3:54809404-54809423 | None:intergenic | 35.0% |
TGTAATTCAAGCTTCTCTCA+AGG | - | chr2_3:54809482-54809501 | None:intergenic | 35.0% | |
ATTTAAACTTAAGAGGGGAG+GGG | - | chr2_3:54809507-54809526 | None:intergenic | 35.0% | |
GATTTAAACTTAAGAGGGGA+GGG | - | chr2_3:54809508-54809527 | None:intergenic | 35.0% | |
AGATTTAAACTTAAGAGGGG+AGG | - | chr2_3:54809509-54809528 | None:intergenic | 35.0% | |
ATTCAAGCATCTTATAAGGG+AGG | + | chr2_3:54809983-54810002 | Msa0299640:intron | 35.0% | |
TTCAAGCATCTTATAAGGGA+GGG | + | chr2_3:54809984-54810003 | Msa0299640:intron | 35.0% | |
!! | GTAATTCAAGCATTTTTGGG+GGG | + | chr2_3:54810070-54810089 | Msa0299640:intron | 35.0% |
! | GCATTGGCAAAAAACTAAGA+AGG | - | chr2_3:54810160-54810179 | None:intergenic | 35.0% |
ATGAAAAGTAGCTTAAGTCG+AGG | - | chr2_3:54810182-54810201 | None:intergenic | 35.0% | |
!!! | GAAGAGTTTGGTGGTTTTAT+AGG | - | chr2_3:54810374-54810393 | None:intergenic | 35.0% |
CCTGTGATAAAGTTCTTGAT+TGG | - | chr2_3:54810440-54810459 | None:intergenic | 35.0% | |
CCAATCAAGAACTTTATCAC+AGG | + | chr2_3:54810437-54810456 | Msa0299640:intron | 35.0% | |
AAGAACTTTATCACAGGACA+TGG | + | chr2_3:54810443-54810462 | Msa0299640:intron | 35.0% | |
! | ACTTGAAGGTGTGAATATGA+AGG | - | chr2_3:54810474-54810493 | None:intergenic | 35.0% |
TTCATATTCACACCTTCAAG+TGG | + | chr2_3:54810473-54810492 | Msa0299640:intron | 35.0% | |
GTTGTTAGGATTACCTTCAT+TGG | - | chr2_3:54810546-54810565 | None:intergenic | 35.0% | |
TACATCCTTAACTTCACATG+AGG | + | chr2_3:54810655-54810674 | Msa0299640:intron | 35.0% | |
AATGCGTTGAACATGAAAAG+TGG | + | chr2_3:54810713-54810732 | Msa0299640:intron | 35.0% | |
GTGGAGAAAATTATCGAGTA+TGG | + | chr2_3:54810732-54810751 | Msa0299640:intron | 35.0% | |
AGCATGAATCTTAACCTTTC+TGG | + | chr2_3:54810830-54810849 | Msa0299640:CDS | 35.0% | |
!! | TAACCTTTCTGGAGTTCTTA+TGG | + | chr2_3:54810841-54810860 | Msa0299640:CDS | 35.0% |
CTTATGGATGAAACTTACGT+TGG | + | chr2_3:54810857-54810876 | Msa0299640:CDS | 35.0% | |
CCAAAAAACCATCCTTTATG+AGG | - | chr2_3:54811001-54811020 | None:intergenic | 35.0% | |
!!! | CCTCATAAAGGATGGTTTTT+TGG | + | chr2_3:54810998-54811017 | Msa0299640:CDS | 35.0% |
GTTGTCTGTGTCTTAATCAT+TGG | + | chr2_3:54811052-54811071 | Msa0299640:intron | 35.0% | |
GAGAAGAAGAAATTGAAGAC+TGG | + | chr2_3:54811113-54811132 | Msa0299640:intron | 35.0% | |
TCTTGGAAACTAATCCTATG+TGG | - | chr2_3:54811154-54811173 | None:intergenic | 35.0% | |
TTCTATGTTTCAGTCTTCCT+AGG | - | chr2_3:54811336-54811355 | None:intergenic | 35.0% | |
ATTTAGTAGGATTCAGAGGT+TGG | + | chr2_3:54811356-54811375 | Msa0299640:intron | 35.0% | |
AAGAAGGAAAGATGCTAACA+TGG | + | chr2_3:54811461-54811480 | Msa0299640:intron | 35.0% | |
AGAAGGAAAGATGCTAACAT+GGG | + | chr2_3:54811462-54811481 | Msa0299640:intron | 35.0% | |
!!! | GTTTTGAAAAATGTAGCCAC+AGG | + | chr2_3:54811499-54811518 | Msa0299640:intron | 35.0% |
AAGCAATGTTCTACTTGACA+AGG | + | chr2_3:54811579-54811598 | Msa0299640:intron | 35.0% | |
CAAGGATATGAATGCTAGAT+TGG | + | chr2_3:54811597-54811616 | Msa0299640:intron | 35.0% | |
AGGATATGAATGCTAGATTG+GGG | + | chr2_3:54811599-54811618 | Msa0299640:intron | 35.0% | |
!! | ACAAAAGTACTCGGAACATT+AGG | + | chr2_3:54811673-54811692 | Msa0299640:intron | 35.0% |
!! | CAAAAGTACTCGGAACATTA+GGG | + | chr2_3:54811674-54811693 | Msa0299640:intron | 35.0% |
TCAACTATGTCTGATGTGTT+CGG | + | chr2_3:54811733-54811752 | Msa0299640:intron | 35.0% | |
! | TTGGTATTGGAAGTGATTTG+CGG | + | chr2_3:54811766-54811785 | Msa0299640:intron | 35.0% |
CTATTGAAGAACATAAGCCA+GGG | + | chr2_3:54811797-54811816 | Msa0299640:intron | 35.0% | |
CAATTGATCAAGCACCATTA+GGG | - | chr2_3:54811842-54811861 | None:intergenic | 35.0% | |
! | TGCTGTTGATGAAAGGTTAA+AGG | + | chr2_3:54811867-54811886 | Msa0299640:intron | 35.0% |
TGATGAAAGGTTAAAGGCTA+AGG | + | chr2_3:54811873-54811892 | Msa0299640:intron | 35.0% | |
GATGAAAGGTTAAAGGCTAA+GGG | + | chr2_3:54811874-54811893 | Msa0299640:intron | 35.0% | |
! | TCATTATTGGTCTAACACCA+GGG | - | chr2_3:54811963-54811982 | None:intergenic | 35.0% |
GAATAAAATCAGCTGCAATG+TGG | + | chr2_3:54812064-54812083 | Msa0299640:CDS | 35.0% | |
AAAGTAGGGTGATCTCTAAA+TGG | - | chr2_3:54812111-54812130 | None:intergenic | 35.0% | |
!! | AATTCTAAGACGTCTTCAAG+AGG | + | chr2_3:54812156-54812175 | Msa0299640:CDS | 35.0% |
ACTTCACCATTCATCCAAGA+TGG | + | chr2_3:54801156-54801175 | Msa0299640:exon | 40.0% | |
TGTTCTCCATCTTGGATGAA+TGG | - | chr2_3:54801165-54801184 | None:intergenic | 40.0% | |
!! | AAGGTAGTGGTTTTCTTGCA+TGG | + | chr2_3:54801334-54801353 | Msa0299640:CDS | 40.0% |
TGCATGGATTCCCAGAAATA+TGG | + | chr2_3:54801350-54801369 | Msa0299640:CDS | 40.0% | |
! | ATGATTGCTGTTGCAAATGC+TGG | + | chr2_3:54801391-54801410 | Msa0299640:CDS | 40.0% |
!! | GCCTTTGATTTTAGAGGCTA+TGG | + | chr2_3:54801427-54801446 | Msa0299640:CDS | 40.0% |
GATCCTTGACTTCATCAACA+AGG | - | chr2_3:54801498-54801517 | None:intergenic | 40.0% | |
!!! | CAGAAGCTACTTTTTCTGGA+TGG | - | chr2_3:54802157-54802176 | None:intergenic | 40.0% |
!! | AGAAGCCTTTTGGAAGAAGA+TGG | - | chr2_3:54802232-54802251 | None:intergenic | 40.0% |
! | CTAGTGATGTAGAAGCCTTT+TGG | - | chr2_3:54802242-54802261 | None:intergenic | 40.0% |
CAAAAGGCTTCTACATCACT+AGG | + | chr2_3:54802240-54802259 | Msa0299640:CDS | 40.0% | |
AGTAAACTAATTCAGGAGCC+TGG | + | chr2_3:54802447-54802466 | Msa0299640:intron | 40.0% | |
GTAAACTAATTCAGGAGCCT+GGG | + | chr2_3:54802448-54802467 | Msa0299640:intron | 40.0% | |
CTTGATTATCACCTGCTACT+GGG | - | chr2_3:54802554-54802573 | None:intergenic | 40.0% | |
TCTTGATTATCACCTGCTAC+TGG | - | chr2_3:54802555-54802574 | None:intergenic | 40.0% | |
AAGTCTTGCTCAGAAAACCA+TGG | - | chr2_3:54802615-54802634 | None:intergenic | 40.0% | |
TATGTAAGGTGGTGTCTCTA+TGG | - | chr2_3:54803242-54803261 | None:intergenic | 40.0% | |
TGGTCACTAAGTATGTAAGG+TGG | - | chr2_3:54803253-54803272 | None:intergenic | 40.0% | |
AGCGCAGGAACATTTACTTT+AGG | - | chr2_3:54803438-54803457 | None:intergenic | 40.0% | |
! | TAAGCTTGTTCACTTCCTCT+GGG | - | chr2_3:54803702-54803721 | None:intergenic | 40.0% |
! | ATAAGCTTGTTCACTTCCTC+TGG | - | chr2_3:54803703-54803722 | None:intergenic | 40.0% |
AATTCGAGCAAGAACTCTGT+AGG | + | chr2_3:54803815-54803834 | Msa0299640:intron | 40.0% | |
! | TTTTACCACAATGGCCAAGA+AGG | + | chr2_3:54804043-54804062 | Msa0299640:intron | 40.0% |
AGGATGAGAGAAGGAGAAAA+AGG | + | chr2_3:54804063-54804082 | Msa0299640:intron | 40.0% | |
GGATGAGAGAAGGAGAAAAA+GGG | + | chr2_3:54804064-54804083 | Msa0299640:intron | 40.0% | |
GATGAGAGAAGGAGAAAAAG+GGG | + | chr2_3:54804065-54804084 | Msa0299640:intron | 40.0% | |
TATGCGTTGCATTGCAAGAT+TGG | + | chr2_3:54804206-54804225 | Msa0299640:intron | 40.0% | |
TTTGGTCTCCTTTCATCATC+GGG | + | chr2_3:54804320-54804339 | Msa0299640:intron | 40.0% | |
CCATATGTGATATGACAACC+TGG | - | chr2_3:54804524-54804543 | None:intergenic | 40.0% | |
CCAGGTTGTCATATCACATA+TGG | + | chr2_3:54804521-54804540 | Msa0299640:intron | 40.0% | |
AGAAACTGATCACATGTACG+TGG | + | chr2_3:54804810-54804829 | Msa0299640:intron | 40.0% | |
CAAGGAAGTAATGCACACAT+GGG | - | chr2_3:54804890-54804909 | None:intergenic | 40.0% | |
CAAAACAACTATTGGCATGG+AGG | - | chr2_3:54804920-54804939 | None:intergenic | 40.0% | |
! | CTCCATGCCAATAGTTGTTT+TGG | + | chr2_3:54804918-54804937 | Msa0299640:intron | 40.0% |
!!! | AGGGGAATAGTTGTTTTGGT+TGG | + | chr2_3:54804953-54804972 | Msa0299640:intron | 40.0% |
!!! | GGAATAGTTGTTTTGGTTGG+TGG | + | chr2_3:54804956-54804975 | Msa0299640:intron | 40.0% |
TAACACCTCTACGATCTTTG+TGG | + | chr2_3:54805047-54805066 | Msa0299640:intron | 40.0% | |
AATTCTCCTCAATCGGTTGA+AGG | - | chr2_3:54805135-54805154 | None:intergenic | 40.0% | |
TCAGCTGAATTCTCCTCAAT+CGG | - | chr2_3:54805142-54805161 | None:intergenic | 40.0% | |
GGTGTGTGAGGTAGTTATAA+TGG | - | chr2_3:54805461-54805480 | None:intergenic | 40.0% | |
ATGTTCTCCATCTTTGATGC+TGG | - | chr2_3:54805488-54805507 | None:intergenic | 40.0% | |
TCACTTCTACATGACTGTGT+TGG | - | chr2_3:54805511-54805530 | None:intergenic | 40.0% | |
ACACAGTCATGTAGAAGTGA+AGG | + | chr2_3:54805511-54805530 | Msa0299640:CDS | 40.0% | |
CACAGTCATGTAGAAGTGAA+GGG | + | chr2_3:54805512-54805531 | Msa0299640:CDS | 40.0% | |
TTGTGTAGGTGAAAAAGCAG+TGG | + | chr2_3:54805641-54805660 | Msa0299640:intron | 40.0% | |
! | ATGATTGCTGTTGCAAATGC+TGG | + | chr2_3:54801391-54801410 | Msa0299640:CDS | 40.0% |
GCTATTGCCTTTGATTCTAG+AGG | + | chr2_3:54805741-54805760 | Msa0299640:CDS | 40.0% | |
!! | TCCATAGCCTCTAGAATCAA+AGG | - | chr2_3:54805751-54805770 | None:intergenic | 40.0% |
! | CTTATGATCAAAGGTGTGTC+TGG | + | chr2_3:54806123-54806142 | Msa0299640:intron | 40.0% |
TCAGTATGTCAGTGTTTCGT+GGG | + | chr2_3:54806192-54806211 | Msa0299640:intron | 40.0% | |
! | TCATAGATCATGAGTGCTGT+AGG | - | chr2_3:54806420-54806439 | None:intergenic | 40.0% |
TTCTATCAGGCATTCCTCAT+TGG | + | chr2_3:54806609-54806628 | Msa0299640:intron | 40.0% | |
!! | ACTTTTTCTGGATAGACAGC+AGG | - | chr2_3:54806669-54806688 | None:intergenic | 40.0% |
TGCTGTCTATCCAGAAAAAG+TGG | + | chr2_3:54806668-54806687 | Msa0299640:CDS | 40.0% | |
!!! | ATGAGAGAAGCCACTTTTTC+TGG | - | chr2_3:54806681-54806700 | None:intergenic | 40.0% |
GTGGCTTCTCTCATAACTTT+AGG | + | chr2_3:54806687-54806706 | Msa0299640:CDS | 40.0% | |
AAGGCTTCTACATTACTAGG+TGG | + | chr2_3:54806763-54806782 | Msa0299640:CDS | 40.0% | |
AGTAAACTAATTCAGGAGCC+TGG | + | chr2_3:54802447-54802466 | Msa0299640:intron | 40.0% | |
GTAAACTAATTCAGGAGCCT+GGG | + | chr2_3:54802448-54802467 | Msa0299640:intron | 40.0% | |
! | TCTTGATCATCACTTGCTAC+TGG | - | chr2_3:54807066-54807085 | None:intergenic | 40.0% |
AACTGACTAACCACCTTTAG+GGG | - | chr2_3:54807329-54807348 | None:intergenic | 40.0% | |
GACTACTGTTTCAACTTTCC+TGG | + | chr2_3:54807616-54807635 | Msa0299640:CDS | 40.0% | |
TGCACAAAATGACTTCCTTC+TGG | - | chr2_3:54807709-54807728 | None:intergenic | 40.0% | |
TGACGAACGTCGTATACTTT+AGG | - | chr2_3:54808051-54808070 | None:intergenic | 40.0% | |
AACTTAAGGGACTAAATCGG+TGG | + | chr2_3:54808120-54808139 | Msa0299640:intron | 40.0% | |
! | TTACATATTGGCTGCTGGTT+TGG | + | chr2_3:54808186-54808205 | Msa0299640:intron | 40.0% |
TGCCACAGGTTTCTTAGAAT+TGG | - | chr2_3:54808212-54808231 | None:intergenic | 40.0% | |
CACTTGACATCTTAGCTCAA+TGG | + | chr2_3:54808530-54808549 | Msa0299640:intron | 40.0% | |
TAGCTCAATGGTAAAGACCA+AGG | + | chr2_3:54808542-54808561 | Msa0299640:intron | 40.0% | |
ACTCAACATGCTAAACTCCT+TGG | - | chr2_3:54808562-54808581 | None:intergenic | 40.0% | |
TCTTCATCCATCTCAAGGAA+AGG | + | chr2_3:54808712-54808731 | Msa0299640:intron | 40.0% | |
CTTCATCCATCTCAAGGAAA+GGG | + | chr2_3:54808713-54808732 | Msa0299640:intron | 40.0% | |
CATATTCCCTTTCCTTGAGA+TGG | - | chr2_3:54808722-54808741 | None:intergenic | 40.0% | |
TGCTAGGAAAAGGAAATGAG+TGG | - | chr2_3:54809089-54809108 | None:intergenic | 40.0% | |
GTTACTTAACCAATGCCTCA+AGG | - | chr2_3:54809175-54809194 | None:intergenic | 40.0% | |
TTCAAGCTTCTCTCAAGGTA+GGG | - | chr2_3:54809477-54809496 | None:intergenic | 40.0% | |
ATTCAAGCTTCTCTCAAGGT+AGG | - | chr2_3:54809478-54809497 | None:intergenic | 40.0% | |
TCAAGCATCTTATAAGGGAG+GGG | + | chr2_3:54809985-54810004 | Msa0299640:intron | 40.0% | |
! | AAAAGCACGAGCTATTGAGA+AGG | - | chr2_3:54810336-54810355 | None:intergenic | 40.0% |
ACACCTTCAAGTGGTCTAAA+TGG | + | chr2_3:54810482-54810501 | Msa0299640:intron | 40.0% | |
GTTCCATTTAGACCACTTGA+AGG | - | chr2_3:54810488-54810507 | None:intergenic | 40.0% | |
ACAACATCGACCGAGTATAT+CGG | + | chr2_3:54810506-54810525 | Msa0299640:intron | 40.0% | |
ATTGAGGAGACCGATATACT+CGG | - | chr2_3:54810519-54810538 | None:intergenic | 40.0% | |
TACCTTCATTGGTGAGATTG+AGG | - | chr2_3:54810535-54810554 | None:intergenic | 40.0% | |
CTCTCAGATAAACGTTACGA+TGG | + | chr2_3:54810769-54810788 | Msa0299640:intron | 40.0% | |
AGATAAACGTTACGATGGCT+CGG | + | chr2_3:54810774-54810793 | Msa0299640:intron | 40.0% | |
CATCCATAAGAACTCCAGAA+AGG | - | chr2_3:54810847-54810866 | None:intergenic | 40.0% | |
!!! | ACTATCTTTTTTCTTCCCCG+TGG | - | chr2_3:54810894-54810913 | None:intergenic | 40.0% |
CCTTTATGAGGGACAAATGA+AGG | - | chr2_3:54810989-54811008 | None:intergenic | 40.0% | |
CCTTCATTTGTCCCTCATAA+AGG | + | chr2_3:54810986-54811005 | Msa0299640:CDS | 40.0% | |
CATTTGTCCCTCATAAAGGA+TGG | + | chr2_3:54810990-54811009 | Msa0299640:CDS | 40.0% | |
!!! | AGGATGGTTTTTTGGAGCAA+AGG | + | chr2_3:54811006-54811025 | Msa0299640:CDS | 40.0% |
GATTAAGACACAGACAACAC+CGG | - | chr2_3:54811050-54811069 | None:intergenic | 40.0% | |
AAGACTGGGAACTAGAGTAT+TGG | + | chr2_3:54811128-54811147 | Msa0299640:intron | 40.0% | |
!! | AACTAGAGTATTGGCCACAT+AGG | + | chr2_3:54811137-54811156 | Msa0299640:intron | 40.0% |
! | AGGATTCTCTGAAGAGAATG+TGG | + | chr2_3:54811192-54811211 | Msa0299640:intron | 40.0% |
AGAATGTGGTTGCTGTAAGA+GGG | + | chr2_3:54811206-54811225 | Msa0299640:intron | 40.0% | |
TGGATCTTTGAGTGTGAAGA+AGG | + | chr2_3:54811445-54811464 | Msa0299640:intron | 40.0% | |
GGAAGTTAAGGTCTTGCATA+GGG | + | chr2_3:54811546-54811565 | Msa0299640:intron | 40.0% | |
GGATATGAATGCTAGATTGG+GGG | + | chr2_3:54811600-54811619 | Msa0299640:intron | 40.0% | |
! | AATGCTAGATTGGGGGATTT+TGG | + | chr2_3:54811607-54811626 | Msa0299640:intron | 40.0% |
!!! | TAGATTGGGGGATTTTGGTT+TGG | + | chr2_3:54811612-54811631 | Msa0299640:intron | 40.0% |
AACATTAGGGTACATTGCTC+CGG | + | chr2_3:54811687-54811706 | Msa0299640:intron | 40.0% | |
!! | TGTGTTCGGCTTTGGAATAT+TGG | + | chr2_3:54811747-54811766 | Msa0299640:intron | 40.0% |
!! | CGGCTTTGGAATATTGGTAT+TGG | + | chr2_3:54811753-54811772 | Msa0299640:intron | 40.0% |
! | TGGTATTGGAAGTGATTTGC+GGG | + | chr2_3:54811767-54811786 | Msa0299640:intron | 40.0% |
CCTGGCTTATGTTCTTCAAT+AGG | - | chr2_3:54811799-54811818 | None:intergenic | 40.0% | |
CCTATTGAAGAACATAAGCC+AGG | + | chr2_3:54811796-54811815 | Msa0299640:intron | 40.0% | |
ATAAGCCAGGGCTAATTGAA+TGG | + | chr2_3:54811809-54811828 | Msa0299640:intron | 40.0% | |
TAAGCCAGGGCTAATTGAAT+GGG | + | chr2_3:54811810-54811829 | Msa0299640:intron | 40.0% | |
GCAATTGATCAAGCACCATT+AGG | - | chr2_3:54811843-54811862 | None:intergenic | 40.0% | |
! | TGCACAATGCTGTTGATGAA+AGG | + | chr2_3:54811860-54811879 | Msa0299640:intron | 40.0% |
AGCTGAGAGATTGCTTCATT+TGG | + | chr2_3:54811915-54811934 | Msa0299640:CDS | 40.0% | |
GCTGAGAGATTGCTTCATTT+GGG | + | chr2_3:54811916-54811935 | Msa0299640:CDS | 40.0% | |
! | CTCATTATTGGTCTAACACC+AGG | - | chr2_3:54811964-54811983 | None:intergenic | 40.0% |
TTGCTGATATCTGAATCTGG+TGG | - | chr2_3:54812198-54812217 | None:intergenic | 40.0% | |
ACCAGATTCAGATATCAGCA+AGG | + | chr2_3:54812197-54812216 | Msa0299640:CDS | 40.0% | |
TCCTTGCTGATATCTGAATC+TGG | - | chr2_3:54812201-54812220 | None:intergenic | 40.0% | |
GATTCAGATATCAGCAAGGA+AGG | + | chr2_3:54812201-54812220 | Msa0299640:CDS | 40.0% | |
GTGTTGGATGTTCTCCATCT+TGG | - | chr2_3:54801173-54801192 | None:intergenic | 45.0% | |
GAACATCCAACACAGTCATG+TGG | + | chr2_3:54801180-54801199 | Msa0299640:CDS | 45.0% | |
TCACTTCCACATGACTGTGT+TGG | - | chr2_3:54801189-54801208 | None:intergenic | 45.0% | |
ACACAGTCATGTGGAAGTGA+AGG | + | chr2_3:54801189-54801208 | Msa0299640:CDS | 45.0% | |
CACAGTCATGTGGAAGTGAA+GGG | + | chr2_3:54801190-54801209 | Msa0299640:CDS | 45.0% | |
AAGCTCCATGTAGCTGAGAT+CGG | + | chr2_3:54801217-54801236 | Msa0299640:CDS | 45.0% | |
TTGTGCAGGTGAAAAGGTAG+TGG | + | chr2_3:54801321-54801340 | Msa0299640:intron | 45.0% | |
GCCGGAAAAGGCAACTTTAA+TGG | + | chr2_3:54801471-54801490 | Msa0299640:CDS | 45.0% | |
! | GGACCTTGTTGATGAAGTCA+AGG | + | chr2_3:54801492-54801511 | Msa0299640:intron | 45.0% |
AGCTACAAGATATGCTGGGA+TGG | - | chr2_3:54802129-54802148 | None:intergenic | 45.0% | |
CAGCAGCTACAAGATATGCT+GGG | - | chr2_3:54802133-54802152 | None:intergenic | 45.0% | |
ACAGCAGCTACAAGATATGC+TGG | - | chr2_3:54802134-54802153 | None:intergenic | 45.0% | |
! | GAAGGACCAGGAAGTATGAA+GGG | - | chr2_3:54802197-54802216 | None:intergenic | 45.0% |
! | AGAAGGACCAGGAAGTATGA+AGG | - | chr2_3:54802198-54802217 | None:intergenic | 45.0% |
!!! | AGATGGTTTTGGACAGCAGA+AGG | - | chr2_3:54802215-54802234 | None:intergenic | 45.0% |
AAGGCTTCTACATCACTAGG+TGG | + | chr2_3:54802243-54802262 | Msa0299640:CDS | 45.0% | |
CTTGCTCAGAAAACCATGGT+GGG | - | chr2_3:54802611-54802630 | None:intergenic | 45.0% | |
TCTTGCTCAGAAAACCATGG+TGG | - | chr2_3:54802612-54802631 | None:intergenic | 45.0% | |
TGGCTTCAGATTTGCATTGC+AGG | + | chr2_3:54802665-54802684 | Msa0299640:CDS | 45.0% | |
TTGCATTGCAGGTTCCATAC+AGG | + | chr2_3:54802676-54802695 | Msa0299640:CDS | 45.0% | |
TGGAAGACTACATTCGAGGT+GGG | + | chr2_3:54803602-54803621 | Msa0299640:intron | 45.0% | |
TGCACAAAATGGCTTCCTTC+TGG | - | chr2_3:54803670-54803689 | None:intergenic | 45.0% | |
TGTGCATGAACAATTCCCAG+AGG | + | chr2_3:54803684-54803703 | Msa0299640:CDS | 45.0% | |
TCTCCTTCTCTCATCCTTCT+TGG | - | chr2_3:54804060-54804079 | None:intergenic | 45.0% | |
GAAAAAGGGGACCAAGACAA+CGG | + | chr2_3:54804078-54804097 | Msa0299640:intron | 45.0% | |
GGGATTCGAACATCCAAACA+CGG | + | chr2_3:54804589-54804608 | Msa0299640:intron | 45.0% | |
GAACATCCAAACACGGATGA+AGG | + | chr2_3:54804596-54804615 | Msa0299640:intron | 45.0% | |
AGGGAAGAAAAACCCAAACG+TGG | - | chr2_3:54804840-54804859 | None:intergenic | 45.0% | |
! | GGTTTTTCTTCCCTCTTTCG+CGG | + | chr2_3:54804846-54804865 | Msa0299640:intron | 45.0% |
CACACATGGGTGGAAGAAAT+GGG | - | chr2_3:54804877-54804896 | None:intergenic | 45.0% | |
CCAAGGAAGTAATGCACACA+TGG | - | chr2_3:54804891-54804910 | None:intergenic | 45.0% | |
CCATGTGTGCATTACTTCCT+TGG | + | chr2_3:54804888-54804907 | Msa0299640:intron | 45.0% | |
ACCTAACCTTCAACCGATTG+AGG | + | chr2_3:54805126-54805145 | Msa0299640:intron | 45.0% | |
TCCTCAATCGGTTGAAGGTT+AGG | - | chr2_3:54805130-54805149 | None:intergenic | 45.0% | |
TCGGCAAGCAGTCGAAATTA+GGG | - | chr2_3:54805165-54805184 | None:intergenic | 45.0% | |
ATCGGCAAGCAGTCGAAATT+AGG | - | chr2_3:54805166-54805185 | None:intergenic | 45.0% | |
CTGTCTGCATCTGCACATTA+AGG | + | chr2_3:54805380-54805399 | Msa0299640:intron | 45.0% | |
ACCTCATCCAGCATCAAAGA+TGG | + | chr2_3:54805478-54805497 | Msa0299640:intron | 45.0% | |
TCCATCTTTGATGCTGGATG+AGG | - | chr2_3:54805482-54805501 | None:intergenic | 45.0% | |
AAGCTCCATGTAGCTGAGAT+TGG | + | chr2_3:54801217-54801236 | Msa0299640:CDS | 45.0% | |
CAGTTCCAATCTCAGCTACA+TGG | - | chr2_3:54805547-54805566 | None:intergenic | 45.0% | |
CATGTAGCTGAGATTGGAAC+TGG | + | chr2_3:54805545-54805564 | Msa0299640:CDS | 45.0% | |
! | GCCTTTGATTCTAGAGGCTA+TGG | + | chr2_3:54805747-54805766 | Msa0299640:CDS | 45.0% |
!!! | GTTGCTTTTTCTGGTTCTGC+TGG | - | chr2_3:54805786-54805805 | None:intergenic | 45.0% |
GATCCTTGACTTCATCAACG+AGG | - | chr2_3:54805818-54805837 | None:intergenic | 45.0% | |
ACTGACACGTCAACATGTGT+CGG | - | chr2_3:54806177-54806196 | None:intergenic | 45.0% | |
GTCAGTATGTCAGTGTTTCG+TGG | + | chr2_3:54806191-54806210 | Msa0299640:intron | 45.0% | |
TCGTGGGATAGAAATGCTAG+AGG | + | chr2_3:54806208-54806227 | Msa0299640:intron | 45.0% | |
CGTGGGATAGAAATGCTAGA+GGG | + | chr2_3:54806209-54806228 | Msa0299640:intron | 45.0% | |
GTGGGATAGAAATGCTAGAG+GGG | + | chr2_3:54806210-54806229 | Msa0299640:intron | 45.0% | |
TGGGATAGAAATGCTAGAGG+GGG | + | chr2_3:54806211-54806230 | Msa0299640:intron | 45.0% | |
TGGGAGTGATAGGGTTGTTT+GGG | - | chr2_3:54806284-54806303 | None:intergenic | 45.0% | |
TTGGGAGTGATAGGGTTGTT+TGG | - | chr2_3:54806285-54806304 | None:intergenic | 45.0% | |
TCAGGCATTCCTCATTGGTA+AGG | + | chr2_3:54806614-54806633 | Msa0299640:intron | 45.0% | |
TTCCTCATTGGTAAGGACTC+TGG | + | chr2_3:54806621-54806640 | Msa0299640:CDS | 45.0% | |
GGCATTCCTTTCATGAATCC+TGG | + | chr2_3:54806708-54806727 | Msa0299640:CDS | 45.0% | |
GAAGGACCAGGATTCATGAA+AGG | - | chr2_3:54806717-54806736 | None:intergenic | 45.0% | |
!! | AGATGGTTCTGGATTGCAGA+AGG | - | chr2_3:54806735-54806754 | None:intergenic | 45.0% |
!! | CTTTTGGGAGAAGATGGTTC+TGG | - | chr2_3:54806746-54806765 | None:intergenic | 45.0% |
CAGAACCATCTTCTCCCAAA+AGG | + | chr2_3:54806744-54806763 | Msa0299640:CDS | 45.0% | |
!! | AGAAGCCTTTTGGGAGAAGA+TGG | - | chr2_3:54806752-54806771 | None:intergenic | 45.0% |
CTTCTACATTACTAGGTGGC+AGG | + | chr2_3:54806767-54806786 | Msa0299640:CDS | 45.0% | |
AAGTCTTCCTCAGAGAACCA+TGG | - | chr2_3:54807126-54807145 | None:intergenic | 45.0% | |
TGGCTTCAGATTTGCATTGC+AGG | + | chr2_3:54802665-54802684 | Msa0299640:CDS | 45.0% | |
TTGCATTGCAGGTTCCATAC+AGG | + | chr2_3:54802676-54802695 | Msa0299640:CDS | 45.0% | |
TGTTCCTGCACTGCTGATAA+TGG | + | chr2_3:54807585-54807604 | Msa0299640:CDS | 45.0% | |
GTTCCTGCACTGCTGATAAT+GGG | + | chr2_3:54807586-54807605 | Msa0299640:CDS | 45.0% | |
CTGTTTCAACTTTCCTGGCA+TGG | + | chr2_3:54807621-54807640 | Msa0299640:CDS | 45.0% | |
ATGGAAGACTACATCCGAAG+TGG | + | chr2_3:54807640-54807659 | Msa0299640:CDS | 45.0% | |
TGGAAGACTACATCCGAAGT+GGG | + | chr2_3:54807641-54807660 | Msa0299640:CDS | 45.0% | |
! | AATTTTTCACCGCCCCACTT+CGG | - | chr2_3:54807657-54807676 | None:intergenic | 45.0% |
TGTGCATGAACAATTCCCAG+AGG | + | chr2_3:54803684-54803703 | Msa0299640:CDS | 45.0% | |
! | TGAGCTTGTTCACTTCCTCT+GGG | - | chr2_3:54807741-54807760 | None:intergenic | 45.0% |
! | ATGAGCTTGTTCACTTCCTC+TGG | - | chr2_3:54807742-54807761 | None:intergenic | 45.0% |
GATTGTGATTGTGGTTGTGG+AGG | + | chr2_3:54807791-54807810 | Msa0299640:intron | 45.0% | |
! | AATTTCCATGTGTGCTGGTG+TGG | + | chr2_3:54807852-54807871 | Msa0299640:intron | 45.0% |
AGTATCTGCGACGTTCCTTA+AGG | + | chr2_3:54808150-54808169 | Msa0299640:intron | 45.0% | |
! | CAGCTTTACATATTGGCTGC+TGG | + | chr2_3:54808181-54808200 | Msa0299640:intron | 45.0% |
! | GGCCAATTCTAAGAAACCTG+TGG | + | chr2_3:54808207-54808226 | Msa0299640:intron | 45.0% |
AAGGAAACAGTTCTTGCCAC+AGG | - | chr2_3:54808226-54808245 | None:intergenic | 45.0% | |
GGGGAAAAAACATGTCACGA+GGG | - | chr2_3:54808909-54808928 | None:intergenic | 45.0% | |
TGGGGAAAAAACATGTCACG+AGG | - | chr2_3:54808910-54808929 | None:intergenic | 45.0% | |
AAACAGTGTCCTTGAGGCAT+TGG | + | chr2_3:54809163-54809182 | Msa0299640:intron | 45.0% | |
ATTGCTTAACCATTGCCGTG+AGG | + | chr2_3:54809291-54809310 | Msa0299640:intron | 45.0% | |
CTTGCTAATCAGTGTCCTCA+CGG | - | chr2_3:54809309-54809328 | None:intergenic | 45.0% | |
TCAAGCTTCTCTCAAGGTAG+GGG | - | chr2_3:54809476-54809495 | None:intergenic | 45.0% | |
!! | ATTCAAGCATTTTTGGGGGG+AGG | + | chr2_3:54810073-54810092 | Msa0299640:intron | 45.0% |
!! | TTCAAGCATTTTTGGGGGGA+GGG | + | chr2_3:54810074-54810093 | Msa0299640:intron | 45.0% |
AGTAGCTTAAGTCGAGGCAT+TGG | - | chr2_3:54810176-54810195 | None:intergenic | 45.0% | |
GTCATTGGTGAGAGTGAGAA+TGG | - | chr2_3:54810303-54810322 | None:intergenic | 45.0% | |
!! | GAAGGAAGTGGAAGTGTCAT+TGG | - | chr2_3:54810318-54810337 | None:intergenic | 45.0% |
ACGAGCTATTGAGAAGGAAG+TGG | - | chr2_3:54810330-54810349 | None:intergenic | 45.0% | |
AGAAGAGTGGAAGAGTTTGG+TGG | - | chr2_3:54810383-54810402 | None:intergenic | 45.0% | |
AGTAGCAAATGGGAGAAGAG+TGG | - | chr2_3:54810396-54810415 | None:intergenic | 45.0% | |
TGGGGAGACAGAGAAAATGA+AGG | - | chr2_3:54810420-54810439 | None:intergenic | 45.0% | |
CTCCTCAATCTCACCAATGA+AGG | + | chr2_3:54810530-54810549 | Msa0299640:intron | 45.0% | |
TCCTTAACTTCACATGAGGC+TGG | + | chr2_3:54810659-54810678 | Msa0299640:intron | 45.0% | |
! | TTCACATGAGGCTGGCTATT+GGG | + | chr2_3:54810667-54810686 | Msa0299640:intron | 45.0% |
GATAAACGTTACGATGGCTC+GGG | + | chr2_3:54810775-54810794 | Msa0299640:intron | 45.0% | |
! | ATGCTGATAAGAGGCACATG+TGG | - | chr2_3:54810815-54810834 | None:intergenic | 45.0% |
CTGTTGCTGCATGAATCTCT+TGG | - | chr2_3:54811171-54811190 | None:intergenic | 45.0% | |
CAAGAGATTCATGCAGCAAC+AGG | + | chr2_3:54811169-54811188 | Msa0299640:intron | 45.0% | |
GAGAATGTGGTTGCTGTAAG+AGG | + | chr2_3:54811205-54811224 | Msa0299640:intron | 45.0% | |
!! | TTTGCAAGGTGTTGAAGTCG+CGG | + | chr2_3:54811252-54811271 | Msa0299640:intron | 45.0% |
AGAATCCCTCAAGAGAGAGA+AGG | + | chr2_3:54811280-54811299 | Msa0299640:intron | 45.0% | |
GAATCCCTCAAGAGAGAGAA+GGG | + | chr2_3:54811281-54811300 | Msa0299640:intron | 45.0% | |
TCATCCCTTCTCTCTCTTGA+GGG | - | chr2_3:54811288-54811307 | None:intergenic | 45.0% | |
AGAAGGGATGAGAGAGTTTC+TGG | + | chr2_3:54811297-54811316 | Msa0299640:intron | 45.0% | |
TCTTCCTAGGCTTGAAACCT+CGG | - | chr2_3:54811323-54811342 | None:intergenic | 45.0% | |
!! | AGGTTGGTGCAAGGAAGAAA+AGG | + | chr2_3:54811372-54811391 | Msa0299640:intron | 45.0% |
! | GGTTGGTGCAAGGAAGAAAA+GGG | + | chr2_3:54811373-54811392 | Msa0299640:intron | 45.0% |
AGATGCTAACATGGGAAGAG+AGG | + | chr2_3:54811470-54811489 | Msa0299640:intron | 45.0% | |
TTCTGTACCTGCATGAAGGT+TGG | + | chr2_3:54811524-54811543 | Msa0299640:intron | 45.0% | |
TCTGTACCTGCATGAAGGTT+GGG | + | chr2_3:54811525-54811544 | Msa0299640:intron | 45.0% | |
TAACTTCCCAACCTTCATGC+AGG | - | chr2_3:54811534-54811553 | None:intergenic | 45.0% | |
GCATGAAGGTTGGGAAGTTA+AGG | + | chr2_3:54811534-54811553 | Msa0299640:intron | 45.0% | |
GGGAAGTTAAGGTCTTGCAT+AGG | + | chr2_3:54811545-54811564 | Msa0299640:intron | 45.0% | |
!! | GCCAGCACAACAAAAGTACT+CGG | + | chr2_3:54811664-54811683 | Msa0299640:intron | 45.0% |
!! | TCCGAGTACTTTTGTTGTGC+TGG | - | chr2_3:54811668-54811687 | None:intergenic | 45.0% |
CTTCCTGTTCGAATCACTTC+CGG | - | chr2_3:54811709-54811728 | None:intergenic | 45.0% | |
ATGTCTGATGTGTTCGGCTT+TGG | + | chr2_3:54811739-54811758 | Msa0299640:intron | 45.0% | |
TGAATGGGTGGAATCCCTAA+TGG | + | chr2_3:54811825-54811844 | Msa0299640:intron | 45.0% | |
GAAAGGTTAAAGGCTAAGGG+AGG | + | chr2_3:54811877-54811896 | Msa0299640:intron | 45.0% | |
TAAGGGAGGATACACCATTG+AGG | + | chr2_3:54811891-54811910 | Msa0299640:intron | 45.0% | |
CAATCTCTCAGCTTCCTCAA+TGG | - | chr2_3:54811908-54811927 | None:intergenic | 45.0% | |
CTGTGTTCAAATTCAGACCC+TGG | + | chr2_3:54811943-54811962 | Msa0299640:CDS | 45.0% | |
CTGATATCTGAATCTGGTGG+CGG | - | chr2_3:54812195-54812214 | None:intergenic | 45.0% | |
!!! | AAAAAAAATCTTTTAATTTA+TGG | - | chr2_3:54801728-54801747 | None:intergenic | 5.0% |
!!! | AAATTAAAAGATTTTTTTTT+TGG | + | chr2_3:54801729-54801748 | Msa0299640:intron | 5.0% |
!!! | AAGAATATTTTTTTATATAT+GGG | - | chr2_3:54805582-54805601 | None:intergenic | 5.0% |
!! | AATATAAGATATAAATTTAA+GGG | - | chr2_3:54809333-54809352 | None:intergenic | 5.0% |
!! | AAATATAAGATATAAATTTA+AGG | - | chr2_3:54809334-54809353 | None:intergenic | 5.0% |
!! | ATAAAAATAAAAATTATTGA+GGG | - | chr2_3:54809542-54809561 | None:intergenic | 5.0% |
!! | AATAAAAATAAAAATTATTG+AGG | - | chr2_3:54809543-54809562 | None:intergenic | 5.0% |
CAGTTCCGATCTCAGCTACA+TGG | - | chr2_3:54801225-54801244 | None:intergenic | 50.0% | |
CATGTAGCTGAGATCGGAAC+TGG | + | chr2_3:54801223-54801242 | Msa0299640:CDS | 50.0% | |
TTCTGATCATCCAGCTGAGC+CGG | + | chr2_3:54801453-54801472 | Msa0299640:CDS | 50.0% | |
GGCATTCCCTTCATACTTCC+TGG | + | chr2_3:54802188-54802207 | Msa0299640:CDS | 50.0% | |
! | TTTTGGACAGCAGAAGGACC+AGG | - | chr2_3:54802209-54802228 | None:intergenic | 50.0% |
CTTCTACATCACTAGGTGGC+AGG | + | chr2_3:54802247-54802266 | Msa0299640:CDS | 50.0% | |
AACTAATTCAGGAGCCTGGG+AGG | + | chr2_3:54802451-54802470 | Msa0299640:intron | 50.0% | |
ACTAATTCAGGAGCCTGGGA+GGG | + | chr2_3:54802452-54802471 | Msa0299640:intron | 50.0% | |
AAAAGTGAGGTCCCAGTAGC+AGG | + | chr2_3:54802540-54802559 | Msa0299640:CDS | 50.0% | |
! | TCAGAAAACCATGGTGGGAG+GGG | - | chr2_3:54802606-54802625 | None:intergenic | 50.0% |
! | CTCAGAAAACCATGGTGGGA+GGG | - | chr2_3:54802607-54802626 | None:intergenic | 50.0% |
AGGAGAGACTCCATTGAAGG+TGG | + | chr2_3:54802850-54802869 | Msa0299640:intron | 50.0% | |
GTCTGGCTAACCACCTTCAA+TGG | - | chr2_3:54802863-54802882 | None:intergenic | 50.0% | |
AGCCAGACTCCCCGATTTAT+CGG | + | chr2_3:54802875-54802894 | Msa0299640:intron | 50.0% | |
AGGTCTCTCACAGTGGAAAG+TGG | + | chr2_3:54803402-54803421 | Msa0299640:intron | 50.0% | |
TGTTCCTGCGCTGCTGATAA+TGG | + | chr2_3:54803446-54803465 | Msa0299640:CDS | 50.0% | |
GTTCCTGCGCTGCTGATAAT+GGG | + | chr2_3:54803447-54803466 | Msa0299640:CDS | 50.0% | |
GGAAGACTACATTCGAGGTG+GGG | + | chr2_3:54803603-54803622 | Msa0299640:intron | 50.0% | |
CTCATCCTTCTTGGCCATTG+TGG | - | chr2_3:54804051-54804070 | None:intergenic | 50.0% | |
TGGCCAAGAAGGATGAGAGA+AGG | + | chr2_3:54804054-54804073 | Msa0299640:intron | 50.0% | |
ACTGTCAACCACCGTTGTCT+TGG | - | chr2_3:54804092-54804111 | None:intergenic | 50.0% | |
ACAACGGTGGTTGACAGTCT+TGG | + | chr2_3:54804094-54804113 | Msa0299640:intron | 50.0% | |
! | TGTACGCTGGTTGAACACTC+AGG | + | chr2_3:54804166-54804185 | Msa0299640:intron | 50.0% |
CGACAACACCCGATGATGAA+AGG | - | chr2_3:54804331-54804350 | None:intergenic | 50.0% | |
TTGTCACGCACACAACTGCA+AGG | + | chr2_3:54804563-54804582 | Msa0299640:intron | 50.0% | |
ACGCACACAACTGCAAGGTT+GGG | + | chr2_3:54804568-54804587 | Msa0299640:intron | 50.0% | |
TGGACACCTTCATCCGTGTT+TGG | - | chr2_3:54804605-54804624 | None:intergenic | 50.0% | |
ATGGGAAATGCCGCGAAAGA+GGG | - | chr2_3:54804859-54804878 | None:intergenic | 50.0% | |
AATGGGAAATGCCGCGAAAG+AGG | - | chr2_3:54804860-54804879 | None:intergenic | 50.0% | |
GCACACATGGGTGGAAGAAA+TGG | - | chr2_3:54804878-54804897 | None:intergenic | 50.0% | |
GGAAGTAATGCACACATGGG+TGG | - | chr2_3:54804887-54804906 | None:intergenic | 50.0% | |
!! | GGTTGGTGGCGCTATAAACA+TGG | + | chr2_3:54804970-54804989 | Msa0299640:intron | 50.0% |
GAGGTCCACAAAGATCGTAG+AGG | - | chr2_3:54805055-54805074 | None:intergenic | 50.0% | |
! | GGACCTCGTTGATGAAGTCA+AGG | + | chr2_3:54805812-54805831 | Msa0299640:CDS | 50.0% |
CTGACACGTCAACATGTGTC+GGG | - | chr2_3:54806176-54806195 | None:intergenic | 50.0% | |
GGAGTGATAGGGTTGTTTGG+GGG | - | chr2_3:54806282-54806301 | None:intergenic | 50.0% | |
GGGAGTGATAGGGTTGTTTG+GGG | - | chr2_3:54806283-54806302 | None:intergenic | 50.0% | |
GTCGGAAGAAGACAAGTGTG+AGG | + | chr2_3:54806508-54806527 | Msa0299640:intron | 50.0% | |
CACCAGAGTCCTTACCAATG+AGG | - | chr2_3:54806626-54806645 | None:intergenic | 50.0% | |
TTCTGGATTGCAGAAGGACC+AGG | - | chr2_3:54806729-54806748 | None:intergenic | 50.0% | |
AACTAATTCAGGAGCCTGGG+AGG | + | chr2_3:54802451-54802470 | Msa0299640:intron | 50.0% | |
ACTAATTCAGGAGCCTGGGA+GGG | + | chr2_3:54802452-54802471 | Msa0299640:intron | 50.0% | |
CTTCCTCAGAGAACCATGGT+GGG | - | chr2_3:54807122-54807141 | None:intergenic | 50.0% | |
TCTTCCTCAGAGAACCATGG+TGG | - | chr2_3:54807123-54807142 | None:intergenic | 50.0% | |
AGGTCTCTCACAGTGGAAAG+TGG | + | chr2_3:54803402-54803421 | Msa0299640:intron | 50.0% | |
TCACCCATTATCAGCAGTGC+AGG | - | chr2_3:54807592-54807611 | None:intergenic | 50.0% | |
GGAAGACTACATCCGAAGTG+GGG | + | chr2_3:54807642-54807661 | Msa0299640:CDS | 50.0% | |
! | CTAGCTGCTACAGTTGATGC+AGG | + | chr2_3:54808377-54808396 | Msa0299640:intron | 50.0% |
AATCAGTGTCCTCACGGCAA+TGG | - | chr2_3:54809303-54809322 | None:intergenic | 50.0% | |
! | TCAAGCATCTTTGAGGGGAG+AGG | - | chr2_3:54809373-54809392 | None:intergenic | 50.0% |
!! | TCAAGCATTTTTGGGGGGAG+GGG | + | chr2_3:54810075-54810094 | Msa0299640:intron | 50.0% |
GGGAGAAGAGTGGAAGAGTT+TGG | - | chr2_3:54810386-54810405 | None:intergenic | 50.0% | |
GCCAGCCTCATGTGAAGTTA+AGG | - | chr2_3:54810663-54810682 | None:intergenic | 50.0% | |
! | CTTCACATGAGGCTGGCTAT+TGG | + | chr2_3:54810666-54810685 | Msa0299640:intron | 50.0% |
! | TCACATGAGGCTGGCTATTG+GGG | + | chr2_3:54810668-54810687 | Msa0299640:intron | 50.0% |
GAGATTCATGCAGCAACAGG+AGG | + | chr2_3:54811172-54811191 | Msa0299640:intron | 50.0% | |
CTCATCCCTTCTCTCTCTTG+AGG | - | chr2_3:54811289-54811308 | None:intergenic | 50.0% | |
!! | AGGATTCAGAGGTTGGTGCA+AGG | + | chr2_3:54811363-54811382 | Msa0299640:intron | 50.0% |
ATGCAGGTACAGAATCCCTG+TGG | - | chr2_3:54811518-54811537 | None:intergenic | 50.0% | |
GGGATTCTGTACCTGCATGA+AGG | + | chr2_3:54811520-54811539 | Msa0299640:intron | 50.0% | |
TCCACCCATTCAATTAGCCC+TGG | - | chr2_3:54811817-54811836 | None:intergenic | 50.0% | |
!! | ATCTGAATCTGGTGGCGGAA+TGG | - | chr2_3:54812190-54812209 | None:intergenic | 50.0% |
TCATCCAGCTGAGCCGGAAA+AGG | + | chr2_3:54801459-54801478 | Msa0299640:CDS | 55.0% | |
AAATCTGCTTCTGCCCTCCC+AGG | - | chr2_3:54802468-54802487 | None:intergenic | 55.0% | |
GGGAGGGCAGAAGCAGATTT+CGG | + | chr2_3:54802468-54802487 | Msa0299640:CDS | 55.0% | |
! | GCTCAGAAAACCATGGTGGG+AGG | - | chr2_3:54802608-54802627 | None:intergenic | 55.0% |
GCGAGGAGAGACTCCATTGA+AGG | + | chr2_3:54802847-54802866 | Msa0299640:intron | 55.0% | |
TGCCGATAAATCGGGGAGTC+TGG | - | chr2_3:54802880-54802899 | None:intergenic | 55.0% | |
TCCACACAGGTCTCTCACAG+TGG | + | chr2_3:54803395-54803414 | Msa0299640:intron | 55.0% | |
TCCACTGTGAGAGACCTGTG+TGG | - | chr2_3:54803399-54803418 | None:intergenic | 55.0% | |
TCACCCATTATCAGCAGCGC+AGG | - | chr2_3:54803453-54803472 | None:intergenic | 55.0% | |
AGACTACATTCGAGGTGGGG+TGG | + | chr2_3:54803606-54803625 | Msa0299640:intron | 55.0% | |
AAAGGGGACCAAGACAACGG+TGG | + | chr2_3:54804081-54804100 | Msa0299640:intron | 55.0% | |
CACGCACACAACTGCAAGGT+TGG | + | chr2_3:54804567-54804586 | Msa0299640:intron | 55.0% | |
CGCACACAACTGCAAGGTTG+GGG | + | chr2_3:54804569-54804588 | Msa0299640:intron | 55.0% | |
GATGCTGGATGAGGTGTGTG+AGG | - | chr2_3:54805473-54805492 | None:intergenic | 55.0% | |
AAATCTGCTTCTGCCCTCCC+AGG | - | chr2_3:54802468-54802487 | None:intergenic | 55.0% | |
GGGAGGGCAGAAGCAGATTT+CGG | + | chr2_3:54802468-54802487 | Msa0299640:CDS | 55.0% | |
! | ATGGTGGGAGGGGAGTAGAT+GGG | - | chr2_3:54802596-54802615 | None:intergenic | 55.0% |
! | TCAGAGAACCATGGTGGGAG+GGG | - | chr2_3:54807117-54807136 | None:intergenic | 55.0% |
! | CTCAGAGAACCATGGTGGGA+GGG | - | chr2_3:54807118-54807137 | None:intergenic | 55.0% |
AGGAGAGACTCCCCTAAAGG+TGG | + | chr2_3:54807316-54807335 | Msa0299640:intron | 55.0% | |
TCCACACAGGTCTCTCACAG+TGG | + | chr2_3:54803395-54803414 | Msa0299640:intron | 55.0% | |
TCCACTGTGAGAGACCTGTG+TGG | - | chr2_3:54803399-54803418 | None:intergenic | 55.0% | |
CGGATGTAGTCTTCCATGCC+AGG | - | chr2_3:54807637-54807656 | None:intergenic | 55.0% | |
AGACTACATCCGAAGTGGGG+CGG | + | chr2_3:54807645-54807664 | Msa0299640:CDS | 55.0% | |
TCACACCACACCAGCACACA+TGG | - | chr2_3:54807860-54807879 | None:intergenic | 55.0% | |
!! | CAAGCATTTTTGGGGGGAGG+GGG | + | chr2_3:54810076-54810095 | Msa0299640:intron | 55.0% |
!! | AAGCATTTTTGGGGGGAGGG+GGG | + | chr2_3:54810077-54810096 | Msa0299640:intron | 55.0% |
! | ATGAGGCTGGCTATTGGGGT+GGG | + | chr2_3:54810672-54810691 | Msa0299640:intron | 55.0% |
CGTTGGATTCTGTGCAGCCA+CGG | + | chr2_3:54810874-54810893 | Msa0299640:CDS | 55.0% | |
GTTGGATTCTGTGCAGCCAC+GGG | + | chr2_3:54810875-54810894 | Msa0299640:CDS | 55.0% | |
TTGGATTCTGTGCAGCCACG+GGG | + | chr2_3:54810876-54810895 | Msa0299640:CDS | 55.0% | |
!! | GATGAGAGAGTTTCTGGCCG+AGG | + | chr2_3:54811303-54811322 | Msa0299640:intron | 55.0% |
GCGCTCATGCATGAGCATCA+CGG | + | chr2_3:54811634-54811653 | Msa0299640:intron | 55.0% | |
GCATGAGCATCACGGACAAG+TGG | + | chr2_3:54811642-54811661 | Msa0299640:intron | 55.0% | |
GCTCCGGAAGTGATTCGAAC+AGG | + | chr2_3:54811703-54811722 | Msa0299640:intron | 55.0% | |
GCCAGGGCTAATTGAATGGG+TGG | + | chr2_3:54811813-54811832 | Msa0299640:intron | 55.0% | |
! | GTTGCCTTTTCCGGCTCAGC+TGG | - | chr2_3:54801466-54801485 | None:intergenic | 60.0% |
! | CATGGTGGGAGGGGAGTAGA+TGG | - | chr2_3:54802597-54802616 | None:intergenic | 60.0% |
CATCTACTCCCCTCCCACCA+TGG | + | chr2_3:54802595-54802614 | Msa0299640:CDS | 60.0% | |
! | GCTACGCGAGTCTTGTACGC+TGG | + | chr2_3:54804153-54804172 | Msa0299640:intron | 60.0% |
TGTACGTGGCGCTCCACGTT+TGG | + | chr2_3:54804824-54804843 | Msa0299640:intron | 60.0% | |
GTACGTGGCGCTCCACGTTT+GGG | + | chr2_3:54804825-54804844 | Msa0299640:intron | 60.0% | |
! | TGGCATGGAGGCGCATTCCA+AGG | - | chr2_3:54804908-54804927 | None:intergenic | 60.0% |
! | CATGGTGGGAGGGGAGTAGA+TGG | - | chr2_3:54802597-54802616 | None:intergenic | 60.0% |
CATCTACTCCCCTCCCACCA+TGG | + | chr2_3:54802595-54802614 | Msa0299640:CDS | 60.0% | |
! | CCTCAGAGAACCATGGTGGG+AGG | - | chr2_3:54807119-54807138 | None:intergenic | 60.0% |
CCTCCCACCATGGTTCTCTG+AGG | + | chr2_3:54807116-54807135 | Msa0299640:CDS | 60.0% | |
GGGAGGAGAGACTCCCCTAA+AGG | + | chr2_3:54807313-54807332 | Msa0299640:intron | 60.0% | |
! | CATGAGGCTGGCTATTGGGG+TGG | + | chr2_3:54810671-54810690 | Msa0299640:intron | 60.0% |
! | AACGTTACGATGGCTCGGGC+AGG | + | chr2_3:54810779-54810798 | Msa0299640:intron | 60.0% |
CTGGCCGAGGTTTCAAGCCT+AGG | + | chr2_3:54811316-54811335 | Msa0299640:intron | 60.0% | |
! | TGGCTCGGGCAGGACGAAAG+AGG | + | chr2_3:54810789-54810808 | Msa0299640:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 54801042 | 54812230 | 54801042 | ID=Msa0299640;Name=Msa0299640 |
chr2_3 | mRNA | 54801042 | 54812230 | 54801042 | ID=Msa0299640-mRNA-1;Parent=Msa0299640;Name=Msa0299640-mRNA-1;_AED=0.38;_eAED=0.39;_QI=133|0.58|0.46|1|0.58|0.61|13|0|770 |
chr2_3 | exon | 54801042 | 54801244 | 54801042 | ID=Msa0299640-mRNA-1:exon:17480;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54801329 | 54801507 | 54801329 | ID=Msa0299640-mRNA-1:exon:17481;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54802098 | 54802268 | 54802098 | ID=Msa0299640-mRNA-1:exon:17482;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54802462 | 54802697 | 54802462 | ID=Msa0299640-mRNA-1:exon:17483;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54803404 | 54803468 | 54803404 | ID=Msa0299640-mRNA-1:exon:17484;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54803671 | 54803747 | 54803671 | ID=Msa0299640-mRNA-1:exon:17485;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54805497 | 54805566 | 54805497 | ID=Msa0299640-mRNA-1:exon:17486;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54805649 | 54805863 | 54805649 | ID=Msa0299640-mRNA-1:exon:17487;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54806618 | 54806788 | 54806618 | ID=Msa0299640-mRNA-1:exon:17488;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54806973 | 54807208 | 54806973 | ID=Msa0299640-mRNA-1:exon:17489;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54807543 | 54807784 | 54807543 | ID=Msa0299640-mRNA-1:exon:17490;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54810801 | 54811049 | 54810801 | ID=Msa0299640-mRNA-1:exon:17491;Parent=Msa0299640-mRNA-1 |
chr2_3 | exon | 54811899 | 54812230 | 54811899 | ID=Msa0299640-mRNA-1:exon:17492;Parent=Msa0299640-mRNA-1 |
chr2_3 | five_prime_UTR | 54801042 | 54801174 | 54801042 | ID=Msa0299640-mRNA-1:five_prime_utr;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54801175 | 54801244 | 54801175 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54801329 | 54801507 | 54801329 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54802098 | 54802268 | 54802098 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54802462 | 54802697 | 54802462 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54803404 | 54803468 | 54803404 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54803671 | 54803747 | 54803671 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54805497 | 54805566 | 54805497 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54805649 | 54805863 | 54805649 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54806618 | 54806788 | 54806618 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54806973 | 54807208 | 54806973 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54807543 | 54807784 | 54807543 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54810801 | 54811049 | 54810801 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
chr2_3 | CDS | 54811899 | 54812230 | 54811899 | ID=Msa0299640-mRNA-1:cds;Parent=Msa0299640-mRNA-1 |
Gene Sequence |
Protein sequence |