AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0300580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0300580 MtrunA17_Chr2g0325361 57.907 841 321 4 466 1288 252 1077 0.0 769
Msa0300580 MtrunA17_Chr2g0325361 45.250 800 257 13 31 659 17 806 6.17e-154 491
Msa0300580 MtrunA17_Chr2g0325651 90.811 370 34 0 5 374 19 388 0.0 656
Msa0300580 MtrunA17_Chr2g0325651 43.182 308 145 6 502 808 110 388 9.03e-41 155
Msa0300580 MtrunA17_Chr2g0325651 44.014 284 122 6 251 528 136 388 5.64e-37 144
Msa0300580 MtrunA17_Chr2g0325651 42.529 261 123 6 467 710 138 388 7.04e-31 126
Msa0300580 MtrunA17_Chr2g0325651 36.749 283 148 4 370 652 135 386 1.80e-30 125
Msa0300580 MtrunA17_Chr2g0325651 38.224 259 125 6 618 862 149 386 1.58e-26 113
Msa0300580 MtrunA17_Chr2g0325651 30.405 296 172 4 724 1009 115 386 5.65e-15 78.6
Msa0300580 MtrunA17_Chr2g0325651 38.788 165 69 5 882 1024 233 387 2.19e-13 73.6
Msa0300580 MtrunA17_Chr2g0325661 55.306 669 261 5 641 1288 225 876 0.0 590
Msa0300580 MtrunA17_Chr2g0325661 43.854 659 236 10 1 588 1 596 1.63e-113 377
Msa0300580 MtrunA17_Chr2g0325661 46.686 347 159 4 393 732 268 595 8.18e-54 204
Msa0300580 MtrunA17_Chr2g0325661 38.813 438 158 7 494 871 225 612 9.24e-49 188
Msa0300580 MtrunA17_Chr2g0325661 39.468 451 235 5 488 938 198 610 3.20e-48 186
Msa0300580 MtrunA17_Chr2g0325641 93.711 318 13 1 702 1019 1 311 0.0 547
Msa0300580 MtrunA17_Chr2g0325641 48.338 331 143 5 422 745 1 310 4.78e-65 224
Msa0300580 MtrunA17_Chr2g0325641 49.677 310 125 4 313 591 1 310 1.08e-62 217
Msa0300580 MtrunA17_Chr2g0325641 45.402 348 148 4 492 839 1 306 8.94e-60 208
Msa0300580 MtrunA17_Chr2g0325641 43.522 301 142 3 382 654 3 303 1.06e-44 165
Msa0300580 MtrunA17_Chr2g0325641 39.645 338 158 5 222 545 1 306 2.18e-40 152
Msa0300580 MtrunA17_Chr2g0325641 38.636 308 91 6 646 855 1 308 3.39e-36 140
Msa0300580 MtrunA17_Chr2g0325641 41.509 265 123 2 212 448 47 307 3.88e-34 134
Msa0300580 MtrunA17_Chr2g0325641 34.902 255 152 1 772 1026 1 241 3.28e-24 105
Msa0300580 MtrunA17_Chr2g0325641 30.284 317 164 6 137 435 31 308 3.15e-16 81.6
Msa0300580 MtrunA17_Chr2g0325641 35.472 265 121 7 136 359 58 313 5.53e-16 80.9
Msa0300580 MtrunA17_Chr2g0325231 51.101 681 277 8 561 1198 215 882 1.37e-177 548
Msa0300580 MtrunA17_Chr2g0325231 39.902 817 341 16 1 784 2 701 5.15e-109 365
Msa0300580 MtrunA17_Chr6g0471251 52.556 626 247 9 691 1288 164 767 2.18e-166 514
Msa0300580 MtrunA17_Chr6g0471251 43.787 507 189 10 1 440 2 479 9.08e-79 276
Msa0300580 MtrunA17_Chr6g0471251 40.970 371 198 10 226 588 130 487 8.75e-35 143
Msa0300580 MtrunA17_Chr6g0471251 39.189 296 162 3 404 685 195 486 1.20e-29 127
Msa0300580 MtrunA17_Chr6g0471251 38.095 315 171 5 496 800 203 503 7.93e-25 112
Msa0300580 MtrunA17_Chr6g0471251 36.102 313 186 2 474 772 195 507 7.20e-24 108
Msa0300580 MtrunA17_Chr6g0471251 34.197 386 199 7 495 839 115 486 8.40e-24 108
Msa0300580 MtrunA17_Chr2g0325611 59.878 491 171 5 816 1289 110 591 2.75e-166 508
Msa0300580 MtrunA17_Chr2g0325611 42.652 279 110 7 139 402 77 320 1.40e-34 141
Msa0300580 MtrunA17_Chr2g0325611 44.304 237 119 4 367 600 95 321 2.55e-29 125
Msa0300580 MtrunA17_Chr2g0325611 48.295 176 82 2 483 658 144 310 1.19e-25 113
Msa0300580 MtrunA17_Chr2g0325611 40.260 231 114 4 317 530 99 322 9.87e-23 104
Msa0300580 MtrunA17_Chr2g0325611 33.544 316 150 9 50 356 49 313 4.27e-21 99.4
Msa0300580 MtrunA17_Chr2g0325611 34.211 266 122 6 493 745 88 313 1.95e-19 94.0
Msa0300580 MtrunA17_Chr2g0325611 34.800 250 140 4 563 800 88 326 3.52e-19 93.2
Msa0300580 MtrunA17_Chr2g0325611 37.557 221 100 5 651 871 144 326 4.36e-16 83.6
Msa0300580 MtrunA17_Chr2g0325631 95.472 265 12 0 1024 1288 1 265 7.60e-161 481
Msa0300580 MtrunA17_Chr2g0325351 59.671 486 176 5 815 1289 213 689 1.65e-160 496
Msa0300580 MtrunA17_Chr2g0325351 37.278 507 193 13 1 475 2 415 4.18e-59 217
Msa0300580 MtrunA17_Chr2g0325351 38.686 274 152 5 395 657 147 415 3.81e-29 125
Msa0300580 MtrunA17_Chr2g0325351 37.025 316 151 9 249 559 143 415 2.95e-26 116
Msa0300580 MtrunA17_Chr2g0325351 43.627 204 103 2 521 713 213 415 6.48e-23 105
Msa0300580 MtrunA17_Chr2g0325351 41.799 189 107 1 581 769 230 415 2.19e-21 100
Msa0300580 MtrunA17_Chr2g0325351 40.187 214 103 3 588 797 223 415 5.33e-21 99.4
Msa0300580 MtrunA17_Chr2g0325321 51.304 690 270 11 506 1188 131 761 3.00e-152 477
Msa0300580 MtrunA17_Chr2g0325321 44.891 597 218 11 18 511 7 595 2.56e-110 365
Msa0300580 MtrunA17_Chr2g0325321 40.705 511 249 11 244 722 94 582 1.75e-60 223
Msa0300580 MtrunA17_Chr2g0325321 43.005 386 160 5 505 862 229 582 1.36e-57 214
Msa0300580 MtrunA17_Chr2g0325321 44.847 359 170 2 448 806 252 582 1.07e-52 199
Msa0300580 MtrunA17_Chr2g0325621 60.044 453 160 4 843 1288 222 660 4.55e-149 465
Msa0300580 MtrunA17_Chr2g0325621 36.277 419 159 11 8 353 4 387 1.29e-41 164
Msa0300580 MtrunA17_Chr2g0325621 36.364 297 165 5 253 546 112 387 6.49e-23 105
Msa0300580 MtrunA17_Chr2g0325621 41.573 178 90 1 508 685 223 386 4.24e-20 96.7
Msa0300580 MtrunA17_Chr2g0325621 39.196 199 103 2 578 772 223 407 2.33e-18 90.9
Msa0300580 MtrunA17_Chr2g0325621 37.179 234 121 4 382 614 177 385 6.40e-17 86.3
Msa0300580 MtrunA17_Chr2g0325621 36.264 182 88 2 649 830 224 377 5.24e-14 77.0
Msa0300580 MtrunA17_Chr5g0434741 76.393 305 70 2 1 304 1 304 5.87e-145 441
Msa0300580 MtrunA17_Chr5g0434741 35.776 232 107 8 362 574 96 304 8.47e-13 70.9
Msa0300580 MtrunA17_Chr5g0434741 34.634 205 105 3 251 448 122 304 1.85e-12 69.7
Msa0300580 MtrunA17_Chr5g0434741 41.216 148 61 5 656 798 178 304 2.43e-12 69.3
Msa0300580 MtrunA17_Chr5g0434741 34.831 178 108 2 327 504 135 304 3.20e-12 69.3
Msa0300580 MtrunA17_Chr2g0325711 44.860 642 307 8 674 1269 178 818 3.47e-142 452
Msa0300580 MtrunA17_Chr2g0325711 38.502 574 245 9 34 552 39 559 3.23e-77 273
Msa0300580 MtrunA17_Chr2g0325711 41.844 282 160 1 475 756 276 553 7.29e-44 172
Msa0300580 MtrunA17_Chr2g0325711 35.335 433 223 10 450 882 178 553 9.14e-38 153
Msa0300580 MtrunA17_Chr5g0434761 79.323 266 55 0 1024 1289 1 266 2.74e-140 427
Msa0300580 MtrunA17_Chr2g0325861 45.839 709 310 13 1 688 2 657 2.77e-138 443
Msa0300580 MtrunA17_Chr2g0325861 41.899 790 359 11 423 1207 147 841 3.46e-135 435
Msa0300580 MtrunA17_Chr2g0325861 41.145 559 248 9 253 762 135 661 1.10e-76 273
Msa0300580 MtrunA17_Chr2g0325261 72.222 306 84 1 1 306 2 306 9.02e-137 419
Msa0300580 MtrunA17_Chr2g0325261 33.218 289 166 9 431 702 28 306 6.28e-18 86.3
Msa0300580 MtrunA17_Chr2g0325261 57.647 85 36 0 394 478 222 306 1.11e-17 85.5
Msa0300580 MtrunA17_Chr2g0325261 37.946 224 117 8 684 898 96 306 2.47e-15 78.6
Msa0300580 MtrunA17_Chr2g0325341 72.222 306 84 1 1 306 2 306 9.02e-137 419
Msa0300580 MtrunA17_Chr2g0325341 33.218 289 166 9 431 702 28 306 6.28e-18 86.3
Msa0300580 MtrunA17_Chr2g0325341 57.647 85 36 0 394 478 222 306 1.11e-17 85.5
Msa0300580 MtrunA17_Chr2g0325341 37.946 224 117 8 684 898 96 306 2.47e-15 78.6
Msa0300580 MtrunA17_Chr2g0325811 45.794 642 306 10 674 1287 203 830 2.21e-136 437
Msa0300580 MtrunA17_Chr2g0325811 38.651 608 250 13 1 521 1 572 3.22e-71 256
Msa0300580 MtrunA17_Chr2g0325811 35.973 442 241 6 252 660 139 571 1.14e-36 150
Msa0300580 MtrunA17_Chr2g0325811 35.598 368 175 6 450 756 203 569 1.75e-33 140
Msa0300580 MtrunA17_Chr2g0325811 40.000 290 156 1 462 751 307 578 2.05e-32 136
Msa0300580 MtrunA17_Chr2g0325811 30.851 188 99 2 220 383 419 599 8.75e-11 66.6
Msa0300580 MtrunA17_Chr2g0280141 47.039 591 284 8 702 1288 252 817 1.09e-133 430
Msa0300580 MtrunA17_Chr2g0280141 35.283 547 234 11 32 517 48 535 2.83e-55 207
Msa0300580 MtrunA17_Chr2g0280141 37.149 498 265 11 251 745 101 553 1.61e-50 193
Msa0300580 MtrunA17_Chr2g0280141 42.020 307 142 4 505 797 251 535 1.12e-41 166
Msa0300580 MtrunA17_Chr2g0280141 38.224 259 113 5 224 482 338 549 1.58e-26 117
Msa0300580 MtrunA17_Chr2g0325281 45.120 625 230 11 14 570 5 584 4.05e-119 384
Msa0300580 MtrunA17_Chr2g0325281 47.692 390 155 4 630 1019 252 592 2.79e-75 262
Msa0300580 MtrunA17_Chr2g0325281 46.448 366 154 3 371 722 245 582 2.03e-69 245
Msa0300580 MtrunA17_Chr2g0325281 47.353 340 179 0 602 941 252 591 7.29e-65 232
Msa0300580 MtrunA17_Chr2g0325281 43.056 360 177 2 465 810 241 586 7.25e-60 217
Msa0300580 MtrunA17_Chr2g0325281 42.574 303 153 2 727 1022 251 539 1.60e-41 162
Msa0300580 MtrunA17_Chr2g0325281 34.146 205 114 2 841 1024 253 457 1.68e-17 88.2
Msa0300580 MtrunA17_Chr2g0325691 41.700 753 351 14 1 689 1 729 1.53e-116 381
Msa0300580 MtrunA17_Chr2g0325691 50.000 554 186 7 498 1009 202 706 3.11e-104 347
Msa0300580 MtrunA17_Chr2g0325691 47.236 597 257 11 370 927 138 715 1.95e-92 314
Msa0300580 MtrunA17_Chr2g0325691 40.888 653 309 9 241 859 108 717 1.03e-81 284
Msa0300580 MtrunA17_Chr2g0325691 39.565 460 200 13 633 1024 125 574 8.02e-44 171
Msa0300580 MtrunA17_Chr5g0434751 71.739 276 64 1 758 1019 1 276 1.42e-99 319
Msa0300580 MtrunA17_Chr5g0434751 64.179 268 86 2 327 584 1 268 2.51e-73 246
Msa0300580 MtrunA17_Chr5g0434751 51.042 288 120 2 548 835 1 267 2.28e-54 192
Msa0300580 MtrunA17_Chr5g0434751 48.727 275 134 1 478 752 1 268 1.13e-45 167
Msa0300580 MtrunA17_Chr5g0434751 45.802 262 121 2 618 858 1 262 9.61e-42 155
Msa0300580 MtrunA17_Chr5g0434751 43.939 264 141 1 646 902 1 264 7.97e-37 141
Msa0300580 MtrunA17_Chr5g0434751 43.493 292 144 2 366 657 1 271 1.99e-36 140
Msa0300580 MtrunA17_Chr5g0434751 41.791 268 135 1 436 682 1 268 6.51e-36 138
Msa0300580 MtrunA17_Chr5g0434751 42.553 282 131 4 222 486 1 268 1.68e-33 131
Msa0300580 MtrunA17_Chr5g0434751 43.033 244 112 4 218 440 27 264 1.17e-28 117
Msa0300580 MtrunA17_Chr2g0325761 41.894 623 223 11 1 503 1 604 4.57e-99 332
Msa0300580 MtrunA17_Chr2g0325761 39.050 484 258 5 314 775 160 628 2.02e-61 224
Msa0300580 MtrunA17_Chr2g0325761 40.984 427 211 6 605 1007 174 583 7.49e-60 219
Msa0300580 MtrunA17_Chr2g0325761 42.336 411 190 6 452 854 220 591 1.51e-52 197
Msa0300580 MtrunA17_Chr2g0325761 41.192 369 193 3 571 932 220 571 4.73e-44 171
Msa0300580 MtrunA17_Chr2g0325761 60.606 99 38 1 1185 1283 591 688 1.05e-26 117
Msa0300580 MtrunA17_Chr2g0325761 32.213 357 186 10 689 1024 160 481 3.64e-19 93.6
Msa0300580 MtrunA17_Chr2g0325701 47.845 464 200 10 743 1185 147 589 1.66e-96 322
Msa0300580 MtrunA17_Chr2g0325701 36.136 440 200 9 1 389 1 410 8.28e-48 181
Msa0300580 MtrunA17_Chr2g0325701 40.449 267 144 4 369 628 153 411 2.62e-30 128
Msa0300580 MtrunA17_Chr2g0325701 35.045 331 184 9 211 528 110 422 4.91e-27 118
Msa0300580 MtrunA17_Chr2g0325701 36.111 288 137 7 395 680 151 393 4.67e-25 112
Msa0300580 MtrunA17_Chr2g0325701 30.958 407 209 7 473 823 20 410 6.85e-22 102
Msa0300580 MtrunA17_Chr2g0325701 32.566 304 176 6 479 782 137 411 1.67e-21 100
Msa0300580 MtrunA17_Chr2g0325701 34.551 301 168 7 539 832 127 405 5.48e-20 95.9
Msa0300580 MtrunA17_Chr5g0416271 47.790 362 152 5 840 1192 157 490 2.19e-82 279
Msa0300580 MtrunA17_Chr5g0416271 36.028 433 170 10 1 427 1 332 1.42e-45 172
Msa0300580 MtrunA17_Chr5g0416271 45.455 242 117 5 372 599 82 322 1.43e-38 151
Msa0300580 MtrunA17_Chr5g0416271 51.724 174 83 1 491 664 145 317 6.03e-35 140
Msa0300580 MtrunA17_Chr5g0416271 42.449 245 130 5 395 629 81 324 1.68e-32 133
Msa0300580 MtrunA17_Chr5g0416271 45.833 168 90 1 567 734 151 317 1.60e-27 118
Msa0300580 MtrunA17_Chr5g0416271 40.580 207 108 2 514 720 126 317 8.73e-26 113
Msa0300580 MtrunA17_Chr5g0416271 45.283 159 87 0 623 781 164 322 8.91e-23 103
Msa0300580 MtrunA17_Chr5g0416271 38.462 247 113 6 636 851 84 322 1.41e-22 103
Msa0300580 MtrunA17_Chr2g0325721 41.714 525 183 11 1 426 1 501 1.92e-81 276
Msa0300580 MtrunA17_Chr2g0325721 46.185 249 117 2 444 678 256 501 6.99e-39 152
Msa0300580 MtrunA17_Chr2g0325721 49.213 254 101 2 579 832 276 501 3.44e-38 150
Msa0300580 MtrunA17_Chr2g0325721 38.817 389 195 10 237 608 139 501 4.15e-36 144
Msa0300580 MtrunA17_Chr2g0325721 38.123 341 166 6 630 965 201 501 2.56e-29 124
Msa0300580 MtrunA17_Chr2g0325721 43.697 238 120 1 623 860 278 501 2.73e-28 120
Msa0300580 MtrunA17_Chr2g0325721 37.538 333 177 6 592 916 192 501 1.21e-24 109
Msa0300580 MtrunA17_Chr2g0325721 32.903 310 164 5 670 936 185 493 5.82e-22 101
Msa0300580 MtrunA17_Chr2g0325721 35.371 229 122 3 808 1015 272 495 1.55e-19 94.0
Msa0300580 MtrunA17_Chr2g0325221 40.175 570 230 12 39 551 77 592 3.97e-78 273
Msa0300580 MtrunA17_Chr2g0325221 40.404 297 159 2 504 800 311 589 1.47e-41 164
Msa0300580 MtrunA17_Chr2g0325221 34.904 467 248 12 594 1015 132 587 4.20e-38 153
Msa0300580 MtrunA17_Chr2g0325221 32.708 480 275 9 467 926 138 589 5.66e-34 140
Msa0300580 MtrunA17_Chr2g0325221 60.784 102 39 1 1186 1287 599 699 2.76e-28 122
Msa0300580 MtrunA17_Chr2g0333341 41.011 534 157 16 709 1231 236 622 2.72e-72 254
Msa0300580 MtrunA17_Chr2g0333341 39.946 368 141 7 35 347 107 449 2.07e-46 177
Msa0300580 MtrunA17_Chr2g0333341 35.000 260 135 5 366 610 209 449 1.27e-21 101
Msa0300580 MtrunA17_Chr2g0333341 34.185 313 160 10 377 680 174 449 2.23e-19 94.0
Msa0300580 MtrunA17_Chr2g0333341 30.960 323 172 7 244 562 175 450 2.14e-17 87.8
Msa0300580 MtrunA17_Chr2g0333341 33.333 246 143 6 520 764 224 449 5.59e-15 80.1
Msa0300580 MtrunA17_Chr2g0333341 35.211 284 134 14 237 498 194 449 4.59e-14 77.0
Msa0300580 MtrunA17_Chr2g0333341 30.994 342 181 14 572 904 154 449 9.37e-14 75.9
Msa0300580 MtrunA17_Chr2g0325331 76.129 155 37 0 1024 1178 1 155 1.88e-66 221
Msa0300580 MtrunA17_Chr2g0325291 58.252 206 86 0 1038 1243 1 206 1.42e-62 213
Msa0300580 MtrunA17_Chr2g0332961 47.385 325 112 7 837 1158 85 353 5.20e-61 213
Msa0300580 MtrunA17_Chr2g0332961 34.307 274 142 7 42 314 2 238 5.83e-21 96.3
Msa0300580 MtrunA17_Chr2g0332961 40.571 175 89 2 372 545 68 228 3.08e-17 85.1
Msa0300580 MtrunA17_Chr2g0332961 35.714 210 108 5 497 704 71 255 7.89e-11 65.5
Msa0300580 MtrunA17_Chr2g0332951 53.540 226 74 6 971 1185 2 207 1.57e-55 192
Msa0300580 MtrunA17_Chr2g0325771 66.082 171 48 2 1017 1185 10 172 4.19e-51 178
Msa0300580 MtrunA17_Chr2g0325311 80.769 104 20 0 1186 1289 17 120 3.27e-49 170
Msa0300580 MtrunA17_Chr7g0235901 56.951 223 76 4 408 615 93 310 5.48e-46 168
Msa0300580 MtrunA17_Chr7g0235901 40.237 338 130 11 61 353 1 311 4.50e-43 159
Msa0300580 MtrunA17_Chr7g0235901 44.697 264 100 5 422 685 93 310 1.15e-38 147
Msa0300580 MtrunA17_Chr7g0235901 44.681 282 127 7 636 910 52 311 1.00e-36 141
Msa0300580 MtrunA17_Chr7g0235901 42.491 273 124 7 570 826 56 311 2.19e-30 123
Msa0300580 MtrunA17_Chr7g0235901 43.478 230 110 3 548 769 93 310 9.41e-28 115
Msa0300580 MtrunA17_Chr7g0235901 43.458 214 89 3 379 588 126 311 1.97e-25 108
Msa0300580 MtrunA17_Chr7g0235901 36.803 269 139 8 697 957 64 309 7.49e-23 100
Msa0300580 MtrunA17_Chr7g0235901 36.898 187 107 3 819 1001 132 311 2.67e-18 87.4
Msa0300580 MtrunA17_Chr7g0235901 40.113 177 94 3 857 1022 115 290 8.78e-14 73.9
Msa0300580 MtrunA17_Chr2g0325241 39.067 343 168 4 766 1108 121 422 4.21e-45 169
Msa0300580 MtrunA17_Chr2g0325241 43.056 216 112 2 583 798 120 324 7.54e-28 118
Msa0300580 MtrunA17_Chr2g0325241 40.465 215 111 2 612 823 121 321 1.13e-27 117
Msa0300580 MtrunA17_Chr2g0325241 40.385 208 121 1 486 690 121 328 6.29e-27 115
Msa0300580 MtrunA17_Chr2g0325241 40.000 205 120 1 359 560 120 324 5.32e-26 112
Msa0300580 MtrunA17_Chr2g0325241 38.500 200 107 4 219 417 137 321 9.66e-19 90.5
Msa0300580 MtrunA17_Chr2g0325241 31.152 382 163 15 1 350 8 321 2.20e-12 70.9
Msa0300580 MtrunA17_Chr8g0361651 36.725 403 218 8 886 1283 32 402 4.94e-45 171
Msa0300580 MtrunA17_Chr2g0325781 39.394 330 139 11 1 297 1 302 1.01e-44 164
Msa0300580 MtrunA17_Chr2g0325781 47.778 180 79 5 367 539 131 302 1.81e-25 108
Msa0300580 MtrunA17_Chr2g0325781 56.566 99 33 1 511 609 214 302 2.97e-19 90.1
Msa0300580 MtrunA17_Chr2g0325781 36.889 225 106 7 468 678 99 301 2.32e-16 81.6
Msa0300580 MtrunA17_Chr2g0325781 37.975 237 99 12 605 835 110 304 4.91e-15 77.8
Msa0300580 MtrunA17_Chr2g0325781 34.956 226 113 7 441 653 100 304 2.93e-14 75.5
Msa0300580 MtrunA17_Chr2g0325781 45.133 113 50 3 857 965 197 301 2.42e-12 69.7
Msa0300580 MtrunA17_Chr2g0325781 34.513 226 110 7 665 875 100 302 1.14e-11 67.4
Msa0300580 MtrunA17_Chr2g0325271 73.077 104 28 0 1185 1288 40 143 4.94e-44 156
Msa0300580 MtrunA17_Chr4g0024061 29.445 703 374 18 628 1283 21 648 4.94e-41 163
Msa0300580 MtrunA17_Chr3g0140591 54.878 164 73 1 1022 1185 7 169 5.30e-40 146
Msa0300580 MtrunA17_Chr2g0325741 42.908 282 114 13 15 275 47 302 1.10e-38 147
Msa0300580 MtrunA17_Chr2g0325751 48.322 149 65 3 898 1034 7 155 2.36e-27 109
Msa0300580 MtrunA17_Chr2g0325751 48.062 129 60 1 530 658 3 124 9.72e-21 90.5
Msa0300580 MtrunA17_Chr2g0325751 47.826 115 53 1 408 522 7 114 3.81e-18 82.8
Msa0300580 MtrunA17_Chr2g0325751 40.559 143 78 1 490 632 5 140 1.10e-17 81.6
Msa0300580 MtrunA17_Chr2g0325751 42.742 124 71 0 465 588 1 124 2.19e-17 80.9
Msa0300580 MtrunA17_Chr2g0325751 42.636 129 67 1 560 688 5 126 7.81e-17 79.3
Msa0300580 MtrunA17_Chr2g0325751 42.953 149 64 2 418 566 3 130 1.30e-16 78.6
Msa0300580 MtrunA17_Chr2g0325751 41.509 159 58 3 600 758 3 126 3.11e-16 77.4
Msa0300580 MtrunA17_Chr2g0325751 43.750 128 68 1 337 464 3 126 1.01e-15 75.9
Msa0300580 MtrunA17_Chr2g0325751 39.394 132 73 1 375 506 2 126 8.18e-14 70.5
Msa0300580 MtrunA17_Chr2g0325751 39.535 129 71 1 756 884 5 126 4.95e-13 68.2
Msa0300580 MtrunA17_Chr2g0325751 41.538 130 68 2 447 576 5 126 5.61e-13 68.2
Msa0300580 MtrunA17_Chr2g0325751 38.931 131 73 1 576 706 7 130 9.44e-13 67.4
Msa0300580 MtrunA17_Chr2g0325751 42.373 118 61 1 810 927 3 113 6.47e-12 65.1
Msa0300580 MtrunA17_Chr2g0325751 40.310 129 67 2 322 440 2 130 7.33e-12 65.1
Msa0300580 MtrunA17_Chr2g0325751 35.000 160 69 2 585 744 2 126 7.62e-12 64.7
Msa0300580 MtrunA17_Chr2g0325751 36.184 152 62 3 702 853 7 123 7.92e-12 64.7
Msa0300580 MtrunA17_Chr2g0325751 41.732 127 60 2 233 352 4 123 2.54e-11 63.2
Msa0300580 MtrunA17_Chr2g0325751 43.011 93 53 0 224 316 30 122 2.61e-11 63.2
Msa0300580 MtrunA17_Chr2g0325751 42.593 108 59 1 264 368 7 114 5.02e-11 62.4
Msa0300580 MtrunA17_Chr2g0325201 44.382 178 77 2 163 339 72 228 1.47e-25 106
Msa0300580 MtrunA17_Chr2g0325201 36.082 194 111 3 409 602 48 228 7.40e-14 72.4
Msa0300580 MtrunA17_Chr2g0325201 36.788 193 101 3 491 672 46 228 1.92e-13 71.2
Msa0300580 MtrunA17_Chr2g0325201 37.879 132 71 1 649 769 96 227 1.00e-11 66.2
Msa0300580 MtrunA17_Chr7g0235921 71.134 97 27 1 1102 1198 1 96 6.98e-24 97.8
Msa0300580 MtrunA17_Chr4g0044221 48.000 125 58 3 1002 1120 168 291 1.67e-22 100
Msa0300580 MtrunA17_Chr2g0325791 50.877 114 52 1 455 564 41 154 3.29e-17 84.3
Msa0300580 MtrunA17_Chr2g0325791 43.537 147 64 3 451 593 24 155 3.75e-17 84.3
Msa0300580 MtrunA17_Chr2g0325791 45.238 126 65 1 687 808 35 160 5.73e-17 84.0
Msa0300580 MtrunA17_Chr2g0325791 45.139 144 68 2 493 636 24 156 1.75e-16 82.4
Msa0300580 MtrunA17_Chr2g0325791 36.723 177 73 4 351 523 14 155 4.65e-16 80.9
Msa0300580 MtrunA17_Chr2g0325791 42.623 122 66 1 562 679 36 157 3.64e-15 78.2
Msa0300580 MtrunA17_Chr2g0325791 40.000 155 81 3 717 867 24 170 5.82e-15 77.8
Msa0300580 MtrunA17_Chr2g0325791 42.208 154 74 4 237 383 24 169 1.34e-14 76.6
Msa0300580 MtrunA17_Chr2g0325791 41.250 160 53 5 294 440 25 156 1.80e-14 76.3
Msa0300580 MtrunA17_Chr2g0325791 42.361 144 72 2 563 706 24 156 3.91e-14 75.1
Msa0300580 MtrunA17_Chr2g0325791 38.760 129 75 1 819 943 41 169 1.47e-13 73.6
Msa0300580 MtrunA17_Chr2g0325791 42.063 126 62 2 357 471 41 166 1.21e-11 67.8
Msa0300580 MtrunA17_Chr2g0325791 48.421 95 49 0 226 320 72 166 2.47e-11 66.6
Msa0300580 MtrunA17_Chr2g0325791 35.821 134 82 1 632 761 36 169 2.78e-11 66.6
Msa0300580 MtrunA17_Chr2g0325791 39.706 136 58 3 746 881 38 149 6.10e-11 65.5
Msa0300580 MtrunA17_Chr2g0325791 34.940 166 62 5 815 966 24 157 7.37e-11 65.1
Msa0300580 MtrunA17_Chr2g0325211 41.772 158 88 1 487 644 2 155 1.13e-16 79.7
Msa0300580 MtrunA17_Chr2g0325211 35.404 161 86 2 599 745 2 158 4.47e-15 75.1
Msa0300580 MtrunA17_Chr2g0325211 36.747 166 101 2 851 1013 2 166 4.92e-15 75.1
Msa0300580 MtrunA17_Chr2g0325211 35.088 171 93 2 448 618 5 157 6.55e-13 68.9
Msa0300580 MtrunA17_Chr2g0325211 37.356 174 77 3 389 548 2 157 7.49e-13 68.6
Msa0300580 MtrunA17_Chr2g0325211 39.610 154 87 2 655 806 2 151 9.27e-12 65.5
Msa0300580 MtrunA17_Chr2g0325211 36.782 174 92 2 543 716 2 157 9.63e-12 65.5
Msa0300580 MtrunA17_Chr4g0053711 29.630 243 135 8 1055 1269 190 424 1.74e-16 84.3
Msa0300580 MtrunA17_Chr2g0325801 39.355 155 61 4 1 152 2 126 5.95e-16 75.9
Msa0300580 MtrunA17_Chr2g0325731 65.517 58 20 0 478 535 1 58 8.57e-16 73.2
Msa0300580 MtrunA17_Chr2g0325731 70.588 51 15 0 555 605 8 58 2.68e-15 72.0
Msa0300580 MtrunA17_Chr2g0325731 68.627 51 16 0 625 675 8 58 1.13e-12 64.3
Msa0300580 MtrunA17_Chr5g0445281 29.016 193 123 4 1096 1283 198 381 3.23e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0300580 AT5G27220.4 26.928 817 447 27 436 1182 64 800 1.07e-17 89.7
Msa0300580 AT5G27220.2 26.928 817 447 27 436 1182 64 800 1.07e-17 89.7
Msa0300580 AT5G27220.1 26.928 817 447 27 436 1182 64 800 1.44e-17 89.4
Msa0300580 AT5G27220.1 25.000 244 170 5 1029 1269 840 1073 1.15e-13 76.6
Msa0300580 AT5G27220.3 26.928 817 447 27 436 1182 64 800 1.44e-17 89.4
Msa0300580 AT5G27220.3 25.000 244 170 5 1029 1269 840 1073 1.15e-13 76.6
Msa0300580 AT5G48385.1 27.007 274 180 7 1035 1289 185 457 3.97e-12 71.2

Find 217 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATTCTTTGGCTGTTC+TGG 0.123481 2_3:-56003565 Msa0300580:CDS
ACAAAGTTATCTTTATTTCT+TGG 0.213566 2_3:-56002337 Msa0300580:three_prime_UTR
GCCTTCAAGTTGATTCTCTT+TGG 0.237766 2_3:+56007067 None:intergenic
GCCATCAAGTTGCTTCTCTT+TGG 0.237832 2_3:+56005606 None:intergenic
TTCTTTGCATCAAGTTGTTT+TGG 0.241221 2_3:+56002493 None:intergenic
GCTATTGAAAGTACAATTTC+AGG 0.255850 2_3:-56005638 Msa0300580:CDS
AGATCCATCAAAACTTGTTT+TGG 0.256362 2_3:-56003769 Msa0300580:CDS
AGAAAATACTGAAAATTCTT+TGG 0.265178 2_3:-56003574 Msa0300580:CDS
AACTTATAACTACTATTGTT+TGG 0.268793 2_3:-56002449 Msa0300580:three_prime_UTR
ATTGAAGGAGCATGAATTAA+AGG 0.284018 2_3:-56007042 Msa0300580:CDS
AACAAATTCAAGCCTCTAAA+AGG 0.286057 2_3:+56002281 None:intergenic
CGTGGAGCTGTTTGGAAGCC+TGG 0.290362 2_3:-56003445 Msa0300580:CDS
TCAAAAGATAACGAACTTAT+AGG 0.292553 2_3:-56005481 Msa0300580:CDS
TCAGAGCAGAAGCAATTTAA+AGG 0.297583 2_3:-56007383 Msa0300580:CDS
TGCATCAAGATCTCTCTCTT+TGG 0.298026 2_3:+56007517 None:intergenic
TAGATTCCAGTTCCTTCATT+TGG 0.301568 2_3:+56006550 None:intergenic
TTGACTCAAGCTCCTTCATT+TGG 0.312326 2_3:+56005794 None:intergenic
TAGATTCCAGTTCCCTCATT+TGG 0.312356 2_3:+56006340 None:intergenic
TTGATTCAAGCTCCTTCATT+TGG 0.318173 2_3:+56005374 None:intergenic
TTGACTCAAACTCCTTCATT+TGG 0.322454 2_3:+56006634 None:intergenic
CTTCGTCTAGTATGTCTAAA+AGG 0.323022 2_3:-56007823 Msa0300580:CDS
TTAATTCATGCTCCTTCAAT+TGG 0.328441 2_3:+56007045 None:intergenic
TAAAGAGCTAGAATCTAAAA+AGG 0.332522 2_3:-56006880 Msa0300580:CDS
TCAATACCTGCTCCTCCATT+TGG 0.333415 2_3:+56005836 None:intergenic
TTGACTGTAATTCCTTCAAT+TGG 0.336005 2_3:+56005500 None:intergenic
TAGATTCCAGATCCTTCATT+TGG 0.339338 2_3:+56006130 None:intergenic
GAAAATTCTTTGGCTGTTCT+GGG 0.340326 2_3:-56003564 Msa0300580:CDS
TTGATAGCAAATCCATCATT+TGG 0.342299 2_3:+56006676 None:intergenic
TAAATTTGATGGACAAATAA+AGG 0.345294 2_3:-56005071 Msa0300580:CDS
ATTTGAGGATCTGCTTCTTA+AGG 0.354835 2_3:-56002572 Msa0300580:CDS
GTTGTTCGAGCAGATAGATT+TGG 0.356437 2_3:+56003679 None:intergenic
GCACTTTGAGGAACGGGTTA+AGG 0.359001 2_3:-56007288 Msa0300580:CDS
AACAACTTGATGCAAAGAAA+TGG 0.363445 2_3:-56002489 Msa0300580:three_prime_UTR
TGAAGGAACTGGAATCTAAA+AGG 0.363610 2_3:-56006545 Msa0300580:CDS
TCATCAAACAGCCTCTTAAC+TGG 0.364820 2_3:+56007926 None:intergenic
TCAATACCAGCTGCATCATT+TGG 0.366482 2_3:+56007129 None:intergenic
CAGAAGAACCTTGATTTCAA+TGG 0.380322 2_3:+56002770 None:intergenic
TTGATTCATGCTCCTGCAAC+CGG 0.382520 2_3:+56005752 None:intergenic
GACTGTCCTACAATGCATTT+CGG 0.382566 2_3:-56002608 Msa0300580:CDS
TCTAAAGATAACCAACTTGT+AGG 0.389187 2_3:-56006069 Msa0300580:CDS
TTGATACCAAGTCCATCATT+TGG 0.389625 2_3:+56006004 None:intergenic
ACTTATAACTACTATTGTTT+GGG 0.392026 2_3:-56002448 Msa0300580:three_prime_UTR
TTGATAGCAAGTCCATCATT+TGG 0.393276 2_3:+56005416 None:intergenic
TTGAATCAAGCTCCCTCATT+CGG 0.400139 2_3:+56005962 None:intergenic
GAAATTGCCGTGGAGCTGTT+TGG 0.402873 2_3:-56003453 Msa0300580:CDS
ACAACTTGATGCAAAGAAAT+GGG 0.402899 2_3:-56002488 Msa0300580:three_prime_UTR
TCAAAGCTGAATAAATTTGA+TGG 0.403901 2_3:-56005082 Msa0300580:CDS
CGTTATTCCACTGTGTCAAA+AGG 0.410783 2_3:-56003730 Msa0300580:CDS
TCAAAAGATAACCAACTTGT+AGG 0.411683 2_3:-56005901 Msa0300580:CDS
GGAGAAGCACTTTGAGGAAC+GGG 0.411687 2_3:-56007294 Msa0300580:CDS
GAAGCTAGCGCGTGATTTGA+AGG 0.411777 2_3:-56003607 Msa0300580:CDS
TCCAAAGAGAAGCAACTTGA+TGG 0.413296 2_3:-56005607 Msa0300580:CDS
TCAAAGTCTTGACAAGAAAC+AGG 0.417784 2_3:+56007995 None:intergenic
TGAATGTACTGTGGAACTTC+AGG 0.418173 2_3:-56007540 Msa0300580:CDS
TCAAAAGATAACAAATTTGC+TGG 0.419490 2_3:-56006741 Msa0300580:CDS
GCAATTGAAAGGAGAAGTTA+AGG 0.420070 2_3:-56006268 Msa0300580:CDS
CTGCTACACTTCCAGTTAAG+AGG 0.422311 2_3:-56007937 Msa0300580:CDS
TGAAGGCCAAATGAAGGAAC+TGG 0.424379 2_3:-56006556 Msa0300580:CDS
TGTAATCCGAAATGCATTGT+AGG 0.425499 2_3:+56002602 None:intergenic
TTGCTTTGAGCTCCTCCACT+TGG 0.428961 2_3:+56006298 None:intergenic
GGAATTTGAATGCCAAATGA+TGG 0.430842 2_3:-56006688 Msa0300580:CDS
ACTAGCAATTTCTTCATCTC+TGG 0.433462 2_3:+56002636 None:intergenic
GCAACTTGAAGACCGGTTGC+AGG 0.434499 2_3:-56005764 Msa0300580:CDS
TGAAGGCCAAATGAAGGATC+TGG 0.437312 2_3:-56006136 Msa0300580:CDS
TGAAGGCCAAATGAGGGAAC+TGG 0.440608 2_3:-56006346 Msa0300580:CDS
TGGACTCGAGCTCCTTCACT+TGG 0.442673 2_3:+56007087 None:intergenic
TTGATTCATGCTCCTTCACT+CGG 0.444211 2_3:+56006172 None:intergenic
TTGATTCATGCTCCTTCACT+CGG 0.444211 2_3:+56006592 None:intergenic
TTAAAAGAAAAGCAGTTTGA+AGG 0.444691 2_3:-56005124 Msa0300580:CDS
TTGAGTCATGCTCCTTCACT+CGG 0.447286 2_3:+56006382 None:intergenic
ATGAAGGAGCTTGAGTCAAA+AGG 0.447820 2_3:-56005790 Msa0300580:CDS
AACCTTGATTTCAATGGAGT+TGG 0.448151 2_3:+56002776 None:intergenic
GTCTAGTATGTCTAAAAGGC+AGG 0.451554 2_3:-56007819 Msa0300580:CDS
ATTCAGTTGTGCATATAACT+TGG 0.456342 2_3:-56002880 Msa0300580:CDS
TAGATTCCACCTCCTTCACT+TGG 0.466838 2_3:+56005584 None:intergenic
TGAAGGAGCTTGAGTCAAAA+GGG 0.467486 2_3:-56005789 Msa0300580:CDS
GGAATTTGAATGCCAAATGA+TGG 0.468899 2_3:-56005428 Msa0300580:CDS
AACCAACTCCATTGAAATCA+AGG 0.469309 2_3:-56002778 Msa0300580:intron
TTGATTTGAAGTCCTCAACT+TGG 0.471069 2_3:+56005227 None:intergenic
CTTGAGCTAAAAGCACATAA+AGG 0.471481 2_3:-56002532 Msa0300580:CDS
GAAGTTTGAAACAAAAGAAA+AGG 0.472932 2_3:-56005449 Msa0300580:CDS
AAAAGTTGAAGTGAAGGAAG+AGG 0.473199 2_3:-56007591 Msa0300580:CDS
TAAGTTCAAAGTAAAGTTGA+AGG 0.474322 2_3:-56005155 Msa0300580:CDS
GCAATTTAAAGGCCGAGTTA+AGG 0.477363 2_3:-56007372 Msa0300580:CDS
GGAATTTGAAGGCCAATTGA+AGG 0.477761 2_3:-56005512 Msa0300580:CDS
GCAGAGAAAAGTTGAAGTGA+AGG 0.479862 2_3:-56007597 Msa0300580:CDS
TCCAAAGAGAATCAACTTGA+AGG 0.480104 2_3:-56007068 Msa0300580:CDS
GGAATTTGAATGCCAAATGA+TGG 0.484921 2_3:-56006016 Msa0300580:CDS
GTCAAAGGAGAAGCACTTTG+AGG 0.487150 2_3:-56007300 Msa0300580:CDS
AATTTATTCAGCTTTGACTC+AGG 0.488181 2_3:+56005088 None:intergenic
GCTATTGAAAGGACAAGTTA+AGG 0.489245 2_3:-56006478 Msa0300580:CDS
TAAAAGACGATGGAATGAAC+TGG 0.489273 2_3:-56005191 Msa0300580:CDS
CCATCACTTGTCTTTCAAAG+TGG 0.490789 2_3:+56005554 None:intergenic
GGAGTTTGAGTCAAAGAAGA+AGG 0.491281 2_3:-56005533 Msa0300580:CDS
GCAGGTTGAAAGCCAAGTTA+AGG 0.493779 2_3:-56006100 Msa0300580:CDS
GGATTACAAACTAGAATTTG+AGG 0.497268 2_3:-56002587 Msa0300580:CDS
CAAATTTGCTGGCAAAGTAA+AGG 0.497672 2_3:-56006730 Msa0300580:CDS
AGAGATGCAACATGAAGGTC+GGG 0.499298 2_3:-56007168 Msa0300580:CDS
AGAATTTGAAGGCCAAATGA+AGG 0.500127 2_3:-56006142 Msa0300580:CDS
AGAATTTGAAGGCCAAATGA+AGG 0.500127 2_3:-56006562 Msa0300580:CDS
TAGACTCTAACTCCTTAACT+TGG 0.502404 2_3:+56006088 None:intergenic
AAATAATATTTCCTTGACTC+GGG 0.503572 2_3:+56005046 None:intergenic
TGAGGAACGGGTTAAGGAGC+TGG 0.503604 2_3:-56007282 Msa0300580:CDS
TCAAAAGAGAGAGAATTTGA+AGG 0.507245 2_3:-56006153 Msa0300580:CDS
TCAAAAGAGAGAGAATTTGA+AGG 0.507245 2_3:-56006363 Msa0300580:CDS
TCAAAAGAGAGAGAATTTGA+AGG 0.507245 2_3:-56006573 Msa0300580:CDS
GTGGAGCTGTTTGGAAGCCT+GGG 0.508191 2_3:-56003444 Msa0300580:CDS
AGTGGAGGAGCTTCAGTCAA+AGG 0.511834 2_3:-56007315 Msa0300580:CDS
TTGGACACAAGTGAGAAAAC+TGG 0.513091 2_3:-56003843 Msa0300580:CDS
TCAAAAGAGAGAAAGTTTGA+AGG 0.514277 2_3:-56005943 Msa0300580:CDS
GGAACTTGAAGGACGAGCAA+TGG 0.514924 2_3:-56007204 Msa0300580:CDS
GGAATTTGAAGGTGAACTGA+AGG 0.516025 2_3:-56006772 Msa0300580:CDS
AAAATAATATTTCCTTGACT+CGG 0.517451 2_3:+56005045 None:intergenic
TGAATGCCAAATGGAGGAGC+AGG 0.517572 2_3:-56005842 Msa0300580:CDS
TTGACTCTAACTCCTTCACT+TGG 0.520538 2_3:+56005920 None:intergenic
GAAATTCGAAGGAAAAGTGA+AGG 0.521636 2_3:-56005344 Msa0300580:CDS
CGATTAAGTCGTACCATTGG+TGG 0.522182 2_3:-56003879 Msa0300580:CDS
TCAAAAGAGAGTCAACTTGA+AGG 0.522414 2_3:-56006825 Msa0300580:CDS
TGTGAAAGAATTTGAATCAA+AGG 0.523232 2_3:-56007231 Msa0300580:CDS
TTGATTCAAATTCCTTCACT+CGG 0.523508 2_3:+56006802 None:intergenic
TCAACTTGAAGGCCAATTGA+AGG 0.523690 2_3:-56007057 Msa0300580:CDS
GGAGCATGAATTAAAGGAGA+AGG 0.524213 2_3:-56007036 Msa0300580:CDS
ACTGCTCTCACAAATCAGTC+TGG 0.524609 2_3:+56002809 None:intergenic
GGAGTTTGAATCAAAAGAGA+GGG 0.527207 2_3:-56005869 Msa0300580:CDS
GGAGGAACTCAAATCACAAA+AGG 0.527491 2_3:-56005263 Msa0300580:CDS
GAATAGCTGTGCTCTAATGA+TGG 0.527791 2_3:-56007414 Msa0300580:CDS
GGAGTTTGAATCAAAAGAGA+AGG 0.529370 2_3:-56006709 Msa0300580:CDS
GAAGGAGTTTCAATCAAAAG+AGG 0.529479 2_3:-56005326 Msa0300580:CDS
GATGCAAAGAAATGGGGTAA+TGG 0.531275 2_3:-56002481 Msa0300580:three_prime_UTR
GAGAATTTGAAGGCCAAATG+AGG 0.533248 2_3:-56006353 Msa0300580:CDS
CCACTTTGAAAGACAAGTGA+TGG 0.536748 2_3:-56005554 Msa0300580:CDS
CCAACTTGTAGGCAAAATGA+AGG 0.536838 2_3:-56005890 Msa0300580:CDS
GCAATTTGATTGCCGTGTGA+AGG 0.539138 2_3:-56006226 Msa0300580:CDS
TTAAAGGAGAAGGAATTTGA+AGG 0.539153 2_3:-56007026 Msa0300580:CDS
GAGGGGATTTGAATGCCAAA+TGG 0.542544 2_3:-56005851 Msa0300580:CDS
AGAATTTGAATCAAAGGAGA+AGG 0.544260 2_3:-56007225 Msa0300580:CDS
TGGTGGAACAAGTTTGCAGT+TGG 0.544547 2_3:-56003862 Msa0300580:CDS
AGTCGTTTAAGAAATGCAAA+AGG 0.545369 2_3:-56007739 Msa0300580:CDS
ATATGCAGTTGAATCTTACA+TGG 0.546667 2_3:-56003907 Msa0300580:intron
TTGACTCAAGTTCCTTAACT+CGG 0.546914 2_3:+56007360 None:intergenic
TCAAAGAAGAAGGAATTTGA+AGG 0.547173 2_3:-56005523 Msa0300580:CDS
TCAAAGGAGAAGGAACTTGA+AGG 0.549197 2_3:-56007215 Msa0300580:CDS
AGAATTTGAAGGTCGAGCGA+AGG 0.549993 2_3:-56005722 Msa0300580:CDS
TGAAGGTCGAGCGAAGGAGC+TGG 0.549994 2_3:-56005716 Msa0300580:CDS
AAGAGATGCAACATGAAGGT+CGG 0.551929 2_3:-56007169 Msa0300580:CDS
GTTATTCCACTGTGTCAAAA+GGG 0.553830 2_3:-56003729 Msa0300580:CDS
TCAAAGGAGAAAGAATTTGA+AGG 0.554226 2_3:-56005733 Msa0300580:CDS
GGAATTTGAAGAACAAGTGA+AGG 0.557993 2_3:-56005302 Msa0300580:CDS
TCATTGCCGTGATCATCATA+TGG 0.558066 2_3:+56007860 None:intergenic
GCATTTCGAAAGCCAAATGA+AGG 0.558177 2_3:-56006646 Msa0300580:CDS
AGAATTTGAAGGCCAAATGA+GGG 0.562042 2_3:-56006352 Msa0300580:CDS
GAAGCATTTCGAAGGCATGA+TGG 0.562462 2_3:-56006985 Msa0300580:CDS
AGTGAAGGGCATTAAATCAA+AGG 0.563625 2_3:-56005287 Msa0300580:CDS
GCAAAAGAGAAGCAATTGAA+AGG 0.564108 2_3:-56006279 Msa0300580:CDS
GAAGGAGCTTGAATCAAAAG+AGG 0.564940 2_3:-56005368 Msa0300580:CDS
GCATTATGAAAGCCAAATGA+AGG 0.566418 2_3:-56005806 Msa0300580:CDS
AGGAGTTTGAATCAAAAGAG+AGG 0.566430 2_3:-56005870 Msa0300580:CDS
CTGCAAACTTGTTCCACCAA+TGG 0.566622 2_3:+56003866 None:intergenic
TTGTTAAGCATCTTATCAAG+AGG 0.568845 2_3:-56002926 Msa0300580:CDS
GCTGATGAATGAACTTGCAT+TGG 0.569923 2_3:-56007768 Msa0300580:CDS
AGGAGAAGCACTTTGAGGAA+CGG 0.570440 2_3:-56007295 Msa0300580:CDS
GCGTGTCGAAAACCAAATGA+AGG 0.570579 2_3:-56005386 Msa0300580:CDS
AAACATACCCGAAACTCTGT+TGG 0.571825 2_3:+56003416 None:intergenic
GCAACATGAAAGCCGAGTGA+AGG 0.578492 2_3:-56006184 Msa0300580:CDS
GCAACATGAAAGCCGAGTGA+AGG 0.578492 2_3:-56006394 Msa0300580:CDS
GCAACATGAAAGCCGAGTGA+AGG 0.578492 2_3:-56006604 Msa0300580:CDS
GCAGTGTGAAGAACGAGTGG+AGG 0.580251 2_3:-56007330 Msa0300580:CDS
GCAACATGAAGGTCGGGTGA+AGG 0.582917 2_3:-56007162 Msa0300580:CDS
GGGCATTAAATCAAAGGAGG+AGG 0.583270 2_3:-56005281 Msa0300580:CDS
GATCGATTAAGTCGTACCAT+TGG 0.583636 2_3:-56003882 Msa0300580:CDS
AAGGGAAGCAACTTGAAGAC+CGG 0.584954 2_3:-56005771 Msa0300580:CDS
TGGTGATGATGATGTGAAGA+AGG 0.589214 2_3:-56008020 Msa0300580:CDS
TCAACTTGAAGGCCGAGTGA+AGG 0.590333 2_3:-56006814 Msa0300580:CDS
AAAGTTTGAAGGCCAAGTGA+AGG 0.591989 2_3:-56005932 Msa0300580:CDS
TGATGGCCAAGTGAAGGAGG+TGG 0.592881 2_3:-56005590 Msa0300580:CDS
GAAGCAGTGTGAAGAACGAG+TGG 0.596138 2_3:-56007333 Msa0300580:CDS
ATGAAGAAATTGCTAGTCTG+AGG 0.599505 2_3:-56002630 Msa0300580:CDS
GGACTTGGTATCAAAACAGA+AGG 0.599999 2_3:-56005995 Msa0300580:CDS
GAGTTTGAATCAAAAGAGAG+GGG 0.602082 2_3:-56005868 Msa0300580:CDS
GCAACTTGATGGCCAAGTGA+AGG 0.602132 2_3:-56005596 Msa0300580:CDS
TCAAAAGAGGAGAAATTCGA+AGG 0.602250 2_3:-56005355 Msa0300580:CDS
GCATTGTGAAAGCCAAGTGA+AGG 0.602696 2_3:-56007099 Msa0300580:CDS
ACAAAAGAGATGCAACATGA+AGG 0.603273 2_3:-56007173 Msa0300580:CDS
AGTGAAGGAAGAGGAACTGA+AGG 0.604034 2_3:-56007582 Msa0300580:CDS
TGGAGCTCAAATCAAAATTG+AGG 0.604620 2_3:-56005660 Msa0300580:CDS
GTTGCAGGAGCATGAATCAA+AGG 0.606832 2_3:-56005749 Msa0300580:CDS
TGAATGCCAAATGATGGACT+TGG 0.610561 2_3:-56006010 Msa0300580:CDS
AAATAAAGGAGCCCGAGTCA+AGG 0.611737 2_3:-56005057 Msa0300580:CDS
AAACTCTGTTGGCAAAACCC+AGG 0.615649 2_3:+56003427 None:intergenic
TTGACTCAAACTCTTTCACA+CGG 0.617691 2_3:+56006424 None:intergenic
GAAGCATTTCGAAAGCATGA+TGG 0.618172 2_3:-56005683 Msa0300580:CDS
AGGAGCTCAAATCAAGAATG+AGG 0.618178 2_3:-56006962 Msa0300580:CDS
TTGACTCAAACTCCTTCACA+CGG 0.618553 2_3:+56006214 None:intergenic
TTGATTCAAATTCTTTCACA+CGG 0.620040 2_3:+56007234 None:intergenic
CAGGCTTCCAAACAGCTCCA+CGG 0.620309 2_3:+56003446 None:intergenic
GCGCAACCATATGATGATCA+CGG 0.621089 2_3:-56007866 Msa0300580:CDS
GCATTTCGAAAGCATGATGG+TGG 0.622132 2_3:-56005680 Msa0300580:CDS
GGAGTTTCAATCAAAAGAGG+AGG 0.625016 2_3:-56005323 Msa0300580:CDS
ACTTGATGGCCAAGTGAAGG+AGG 0.625169 2_3:-56005593 Msa0300580:CDS
ACAGAAGAGAGGCTATTGAA+AGG 0.625887 2_3:-56006489 Msa0300580:CDS
GATCACGGCAATGACGCAGA+TGG 0.626486 2_3:-56007851 Msa0300580:CDS
TGCTATGCACGAAATTGCCG+TGG 0.626591 2_3:-56003463 Msa0300580:CDS
GCATTTGAAAAGCCAAGTTG+AGG 0.630511 2_3:-56005239 Msa0300580:CDS
TCTAGTATGTCTAAAAGGCA+GGG 0.633650 2_3:-56007818 Msa0300580:CDS
AGCAGCGATTTAAAAGACGA+TGG 0.641163 2_3:-56005201 Msa0300580:CDS
CAACTTGATGCAAAGAAATG+GGG 0.642618 2_3:-56002487 Msa0300580:three_prime_UTR
AGGAGCTCAAAACAGAAGAG+AGG 0.642878 2_3:-56006500 Msa0300580:CDS
TGAATGCCAAATGATGCAGC+TGG 0.645461 2_3:-56007135 Msa0300580:CDS
GTCTTTGAAAGAACAAGTTG+AGG 0.646930 2_3:-56006940 Msa0300580:CDS
GGGATTTGAATGCCAAATGG+AGG 0.654030 2_3:-56005848 Msa0300580:CDS
GACACAAGTGAGAAAACTGG+TGG 0.656105 2_3:-56003840 Msa0300580:CDS
GCATTTCGAAGGCATGATGG+AGG 0.658272 2_3:-56006982 Msa0300580:CDS
GAATTTGAAGAACAAGTGAA+GGG 0.669590 2_3:-56005301 Msa0300580:CDS
GAAGGAATTTGAAGGCCGTG+TGG 0.679716 2_3:-56007018 Msa0300580:CDS
GAAGGGCATTAAATCAAAGG+AGG 0.690243 2_3:-56005284 Msa0300580:CDS
TGCAAGTTCATTCATCAGCG+AGG 0.690629 2_3:+56007772 None:intergenic
TTTGACACAGTGGAATAACG+GGG 0.728582 2_3:+56003733 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTAGTTTGAAAGTATTT+GGG + chr2_3:56005525-56005544 None:intergenic 15.0%
!!! AAGGTTTTACTATAATATTA+TGG - chr2_3:56005617-56005636 Msa0300580:CDS 15.0%
!! TCATCAAATTATGAAATATA+TGG + chr2_3:56005874-56005893 None:intergenic 15.0%
!!! AAAAAAGATTTTAGAGAAAA+TGG - chr2_3:56006084-56006103 Msa0300580:CDS 15.0%
!!! TTTTATTTATTTCCTTTTAG+AGG - chr2_3:56008056-56008075 Msa0300580:CDS 15.0%
!!! TAAATTTGATGGACAAATAA+AGG - chr2_3:56005278-56005297 Msa0300580:CDS 20.0%
!! AAAATAATATTTCCTTGACT+CGG + chr2_3:56005307-56005326 None:intergenic 20.0%
!!! TCAAGGAAATATTATTTTGA+TGG - chr2_3:56005309-56005328 Msa0300580:CDS 20.0%
!!! CAAGGAAATATTATTTTGAT+GGG - chr2_3:56005310-56005329 Msa0300580:CDS 20.0%
!!! AAGGAAATATTATTTTGATG+GGG - chr2_3:56005311-56005330 Msa0300580:CDS 20.0%
!! AGATAAATAAGAACATTTAC+CGG + chr2_3:56005346-56005365 None:intergenic 20.0%
!! AAAATATCATCATCATTAAG+AGG + chr2_3:56005400-56005419 None:intergenic 20.0%
!!! CATGATTAAAAATGTTTCTA+CGG + chr2_3:56005448-56005467 None:intergenic 20.0%
!!! CAAATTAGTTTGAAAGTATT+TGG + chr2_3:56005526-56005545 None:intergenic 20.0%
!! TAAATGTACTTTCTATTGTT+GGG + chr2_3:56005913-56005932 None:intergenic 20.0%
!! ATAAATGTACTTTCTATTGT+TGG + chr2_3:56005914-56005933 None:intergenic 20.0%
!!! TTTACACAAGTTTCAATTTT+TGG + chr2_3:56006710-56006729 None:intergenic 20.0%
!! AGAAAATACTGAAAATTCTT+TGG - chr2_3:56006775-56006794 Msa0300580:CDS 20.0%
!! GATTATAAAATCAAATGAGT+TGG - chr2_3:56006985-56007004 Msa0300580:CDS 20.0%
!! CTATAAGAGTTTATCATTTA+TGG - chr2_3:56007102-56007121 Msa0300580:CDS 20.0%
!! TCAAAATTTGTAAACCATAT+AGG + chr2_3:56007313-56007332 None:intergenic 20.0%
!! AACTTATAACTACTATTGTT+TGG - chr2_3:56007900-56007919 Msa0300580:CDS 20.0%
!! ACTTATAACTACTATTGTTT+GGG - chr2_3:56007901-56007920 Msa0300580:CDS 20.0%
!!! ACAAAGTTATCTTTATTTCT+TGG - chr2_3:56008012-56008031 Msa0300580:CDS 20.0%
!!! AGTACATTCAGCAATTTTTT+GGG + chr2_3:56002799-56002818 None:intergenic 25.0%
! TTGATTCAAATTCTTTCACA+CGG + chr2_3:56003118-56003137 None:intergenic 25.0%
! TGTGAAAGAATTTGAATCAA+AGG - chr2_3:56003118-56003137 Msa0300580:intron 25.0%
! TAAAGAGCTAGAATCTAAAA+AGG - chr2_3:56003469-56003488 Msa0300580:CDS 25.0%
! GGAATTTGAATCAAAAAAGA+AGG - chr2_3:56003556-56003575 Msa0300580:CDS 25.0%
! TCAAAAAAGAAGGAATTTGA+AGG - chr2_3:56003566-56003585 Msa0300580:CDS 25.0%
! TCAAAAGATAACAAATTTGC+TGG - chr2_3:56003608-56003627 Msa0300580:CDS 25.0%
!!! AGATTTTGAGTTTAAAGAGA+AGG - chr2_3:56004312-56004331 Msa0300580:intron 25.0%
! TCAAAAGATAACGAACTTAT+AGG - chr2_3:56004868-56004887 Msa0300580:intron 25.0%
!! GAAGTTTGAAACAAAAGAAA+AGG - chr2_3:56004900-56004919 Msa0300580:intron 25.0%
! TAAGTTCAAAGTAAAGTTGA+AGG - chr2_3:56005194-56005213 Msa0300580:CDS 25.0%
! TTAAAAGAAAAGCAGTTTGA+AGG - chr2_3:56005225-56005244 Msa0300580:CDS 25.0%
! TCAAAGCTGAATAAATTTGA+TGG - chr2_3:56005267-56005286 Msa0300580:CDS 25.0%
! AAATAATATTTCCTTGACTC+GGG + chr2_3:56005306-56005325 None:intergenic 25.0%
! GAGATACATAAAATGTTCAA+GGG + chr2_3:56005562-56005581 None:intergenic 25.0%
! AGAGATACATAAAATGTTCA+AGG + chr2_3:56005563-56005582 None:intergenic 25.0%
!! GAACATTTTATGTATCTCTT+AGG - chr2_3:56005564-56005583 Msa0300580:CDS 25.0%
!!! AAACTCGTGTTTTTTATCAA+TGG - chr2_3:56005592-56005611 Msa0300580:CDS 25.0%
!! AAGTATATTGCAAAAAGTGT+AGG - chr2_3:56005685-56005704 Msa0300580:CDS 25.0%
! AATATTCTGACAAACATTGA+GGG - chr2_3:56005711-56005730 Msa0300580:CDS 25.0%
!!! AAGGCTTCTCTAAAATATTT+CGG - chr2_3:56005949-56005968 Msa0300580:CDS 25.0%
! GACATAAATTTCACAACATA+CGG + chr2_3:56005975-56005994 None:intergenic 25.0%
! TACTAAATATTGGAATGAAC+TGG + chr2_3:56006293-56006312 None:intergenic 25.0%
!!! ATATCCAAAACAAGTTTTGA+TGG + chr2_3:56006587-56006606 None:intergenic 25.0%
!! TTTTAACGAAGATGAAGTTT+TGG - chr2_3:56006847-56006866 Msa0300580:CDS 25.0%
!! TATGGTTTTTCATCATGAAT+AGG + chr2_3:56007067-56007086 None:intergenic 25.0%
!! TAGTTCTGTACTATAACTTA+TGG + chr2_3:56007085-56007104 None:intergenic 25.0%
! TTTATCATTTATGGTGAACA+TGG - chr2_3:56007111-56007130 Msa0300580:CDS 25.0%
! ATAAGATGCTTAACAAAATC+TGG + chr2_3:56007419-56007438 None:intergenic 25.0%
! ACTCTGTAAAAAGATGTAAT+TGG - chr2_3:56007962-56007981 Msa0300580:CDS 25.0%
! TAAAAACACCAGAAAGAAAA+AGG + chr2_3:56008041-56008060 None:intergenic 25.0%
AGTCGTTTAAGAAATGCAAA+AGG - chr2_3:56002610-56002629 Msa0300580:CDS 30.0%
!!! CAGTACATTCAGCAATTTTT+TGG + chr2_3:56002800-56002819 None:intergenic 30.0%
AAAAATTGCTGAATGTACTG+TGG - chr2_3:56002800-56002819 Msa0300580:CDS 30.0%
AGAATTTGAATCAAAGGAGA+AGG - chr2_3:56003124-56003143 Msa0300580:intron 30.0%
TTAATTCATGCTCCTTCAAT+TGG + chr2_3:56003307-56003326 None:intergenic 30.0%
! ATTGAAGGAGCATGAATTAA+AGG - chr2_3:56003307-56003326 Msa0300580:intron 30.0%
TTAAAGGAGAAGGAATTTGA+AGG - chr2_3:56003323-56003342 Msa0300580:intron 30.0%
!! TCTAAAAAGAAGCATTTCGA+AGG - chr2_3:56003356-56003375 Msa0300580:intron 30.0%
TTGATTCAAATTCCTTCACT+CGG + chr2_3:56003550-56003569 None:intergenic 30.0%
! TTGATAGCAAATCCATCATT+TGG + chr2_3:56003676-56003695 None:intergenic 30.0%
TCAAAAGAGAGAGAATTTGA+AGG - chr2_3:56003776-56003795 Msa0300580:CDS 30.0%
TCAAAAGAGAGAGAATTTGA+AGG - chr2_3:56003776-56003795 Msa0300580:CDS 30.0%
TCAAAAGAGAGAGAATTTGA+AGG - chr2_3:56003776-56003795 Msa0300580:CDS 30.0%
TCTAAAGATAACCAACTTGT+AGG - chr2_3:56004280-56004299 Msa0300580:intron 30.0%
TCAAAAGAGAGAAAGTTTGA+AGG - chr2_3:56004406-56004425 Msa0300580:intron 30.0%
TCAAAAGATAACCAACTTGT+AGG - chr2_3:56004448-56004467 Msa0300580:intron 30.0%
TCAAAGGAGAAAGAATTTGA+AGG - chr2_3:56004616-56004635 Msa0300580:intron 30.0%
! GCTATTGAAAGTACAATTTC+AGG - chr2_3:56004711-56004730 Msa0300580:intron 30.0%
TCAAAGAAGAAGGAATTTGA+AGG - chr2_3:56004826-56004845 Msa0300580:intron 30.0%
TTGACTGTAATTCCTTCAAT+TGG + chr2_3:56004852-56004871 None:intergenic 30.0%
GAATTTGAAGAACAAGTGAA+GGG - chr2_3:56005048-56005067 Msa0300580:CDS 30.0%
! AATTTATTCAGCTTTGACTC+AGG + chr2_3:56005264-56005283 None:intergenic 30.0%
!!! GTGTTTTTTATCAATGGCTA+AGG - chr2_3:56005598-56005617 Msa0300580:CDS 30.0%
CAATATTCTGACAAACATTG+AGG - chr2_3:56005710-56005729 Msa0300580:CDS 30.0%
ATATTCTGACAAACATTGAG+GGG - chr2_3:56005712-56005731 Msa0300580:CDS 30.0%
ATTTCAACATAGACCTTAAC+TGG + chr2_3:56005815-56005834 None:intergenic 30.0%
TTATGAGTTCCATGTACAAA+AGG - chr2_3:56005930-56005949 Msa0300580:CDS 30.0%
! TTTTTCACTGCAATCATTCT+AGG + chr2_3:56006069-56006088 None:intergenic 30.0%
!! TTTTAGAGAAAATGGCAGAT+TGG - chr2_3:56006092-56006111 Msa0300580:CDS 30.0%
TGAACGTTACAGATAATCTA+GGG + chr2_3:56006238-56006257 None:intergenic 30.0%
TTGAACGTTACAGATAATCT+AGG + chr2_3:56006239-56006258 None:intergenic 30.0%
GCTGCACTTATACTAAATAT+TGG + chr2_3:56006303-56006322 None:intergenic 30.0%
TGTATGACATTGATGAGTTA+TGG + chr2_3:56006325-56006344 None:intergenic 30.0%
ATATGCAGTTGAATCTTACA+TGG - chr2_3:56006442-56006461 Msa0300580:CDS 30.0%
!! AGATCCATCAAAACTTGTTT+TGG - chr2_3:56006580-56006599 Msa0300580:CDS 30.0%
!!! ACAAGTTTCAATTTTTGGTG+AGG + chr2_3:56006705-56006724 None:intergenic 30.0%
!!! TGCTGCTTTTGTCAATTTAT+GGG - chr2_3:56006813-56006832 Msa0300580:CDS 30.0%
TGTAAACCATATAGGTGATT+TGG + chr2_3:56007305-56007324 None:intergenic 30.0%
TTGTTAAGCATCTTATCAAG+AGG - chr2_3:56007423-56007442 Msa0300580:CDS 30.0%
ATTCAGTTGTGCATATAACT+TGG - chr2_3:56007469-56007488 Msa0300580:CDS 30.0%
GGATTACAAACTAGAATTTG+AGG - chr2_3:56007762-56007781 Msa0300580:CDS 30.0%
!! TTCTTTGCATCAAGTTGTTT+TGG + chr2_3:56007859-56007878 None:intergenic 30.0%
AACAACTTGATGCAAAGAAA+TGG - chr2_3:56007860-56007879 Msa0300580:CDS 30.0%
ACAACTTGATGCAAAGAAAT+GGG - chr2_3:56007861-56007880 Msa0300580:CDS 30.0%
TCTGATACGCCAAAAATTTG+TGG - chr2_3:56002303-56002322 Msa0300580:three_prime_UTR 35.0%
TCAAAGTCTTGACAAGAAAC+AGG + chr2_3:56002357-56002376 None:intergenic 35.0%
! CTTTTAGACATACTAGACGA+AGG + chr2_3:56002528-56002547 None:intergenic 35.0%
CTTCGTCTAGTATGTCTAAA+AGG - chr2_3:56002526-56002545 Msa0300580:CDS 35.0%
TCTAGTATGTCTAAAAGGCA+GGG - chr2_3:56002531-56002550 Msa0300580:CDS 35.0%
AAAAGTTGAAGTGAAGGAAG+AGG - chr2_3:56002758-56002777 Msa0300580:intron 35.0%
TCAGAGCAGAAGCAATTTAA+AGG - chr2_3:56002966-56002985 Msa0300580:intron 35.0%
TTGACTCAAGTTCCTTAACT+CGG + chr2_3:56002992-56003011 None:intergenic 35.0%
ACAAAAGAGATGCAACATGA+AGG - chr2_3:56003176-56003195 Msa0300580:intron 35.0%
TCCAAAGAGAATCAACTTGA+AGG - chr2_3:56003281-56003300 Msa0300580:intron 35.0%
! GCTTCTTTTTAGATTCCACA+CGG + chr2_3:56003349-56003368 None:intergenic 35.0%
! GTCTTTGAAAGAACAAGTTG+AGG - chr2_3:56003409-56003428 Msa0300580:intron 35.0%
!! CCTTCACTTGTTTTTCAAAG+TGG + chr2_3:56003496-56003515 None:intergenic 35.0%
! CCACTTTGAAAAACAAGTGA+AGG - chr2_3:56003493-56003512 Msa0300580:CDS 35.0%
TCAAAAGAGAGTCAACTTGA+AGG - chr2_3:56003524-56003543 Msa0300580:CDS 35.0%
!! CAAATTTGCTGGCAAAGTAA+AGG - chr2_3:56003619-56003638 Msa0300580:CDS 35.0%
GGAGTTTGAATCAAAAGAGA+AGG - chr2_3:56003640-56003659 Msa0300580:CDS 35.0%
GGAATTTGAATGCCAAATGA+TGG - chr2_3:56003208-56003227 Msa0300580:intron 35.0%
TTGACTCAAACTCCTTCATT+TGG + chr2_3:56003718-56003737 None:intergenic 35.0%
AGAATTTGAAGGCCAAATGA+AGG - chr2_3:56003787-56003806 Msa0300580:CDS 35.0%
TAGATTCCAGTTCCTTCATT+TGG + chr2_3:56003802-56003821 None:intergenic 35.0%
TGAAGGAACTGGAATCTAAA+AGG - chr2_3:56003804-56003823 Msa0300580:CDS 35.0%
GCTATTGAAAGGACAAGTTA+AGG - chr2_3:56003871-56003890 Msa0300580:CDS 35.0%
TTGACTCAAACTCTTTCACA+CGG + chr2_3:56003928-56003947 None:intergenic 35.0%
AGAATTTGAAGGCCAAATGA+GGG - chr2_3:56003787-56003806 Msa0300580:CDS 35.0%
GCAAAAGAGAAGCAATTGAA+AGG - chr2_3:56004070-56004089 Msa0300580:intron 35.0%
GCAATTGAAAGGAGAAGTTA+AGG - chr2_3:56004081-56004100 Msa0300580:intron 35.0%
AGAATTTGAAGGCCAAATGA+AGG - chr2_3:56003787-56003806 Msa0300580:CDS 35.0%
TAGATTCCAGATCCTTCATT+TGG + chr2_3:56004222-56004241 None:intergenic 35.0%
! TCTGGAATCTAAAAAGAAGC+AGG - chr2_3:56004231-56004250 Msa0300580:intron 35.0%
TAGACTCTAACTCCTTAACT+TGG + chr2_3:56004264-56004283 None:intergenic 35.0%
! CTTTTACTTTGCCTACAAGT+TGG + chr2_3:56004294-56004313 None:intergenic 35.0%
GGAATTTGAATGCCAAATGA+TGG - chr2_3:56003208-56003227 Msa0300580:intron 35.0%
TTGATACCAAGTCCATCATT+TGG + chr2_3:56004348-56004367 None:intergenic 35.0%
!! AGGATTTTGAAAACCGAATG+AGG - chr2_3:56004374-56004393 Msa0300580:intron 35.0%
!! GGATTTTGAAAACCGAATGA+GGG - chr2_3:56004375-56004394 Msa0300580:intron 35.0%
AGGAGTTTGAATCAAAAGAG+AGG - chr2_3:56003639-56003658 Msa0300580:CDS 35.0%
GGAGTTTGAATCAAAAGAGA+GGG - chr2_3:56003640-56003659 Msa0300580:CDS 35.0%
GAGTTTGAATCAAAAGAGAG+GGG - chr2_3:56004481-56004500 Msa0300580:intron 35.0%
GCATTATGAAAGCCAAATGA+AGG - chr2_3:56004543-56004562 Msa0300580:intron 35.0%
TGGAGCTCAAATCAAAATTG+AGG - chr2_3:56004689-56004708 Msa0300580:intron 35.0%
GGAATTTGAATGCCAAATGA+TGG - chr2_3:56003208-56003227 Msa0300580:intron 35.0%
! TTGATAGCAAGTCCATCATT+TGG + chr2_3:56004936-56004955 None:intergenic 35.0%
TTGATTCAAGCTCCTTCATT+TGG + chr2_3:56004978-56004997 None:intergenic 35.0%
TCAAAAGAGGAGAAATTCGA+AGG - chr2_3:56004994-56005013 Msa0300580:intron 35.0%
GAAATTCGAAGGAAAAGTGA+AGG - chr2_3:56005005-56005024 Msa0300580:intron 35.0%
GAAGGAGTTTCAATCAAAAG+AGG - chr2_3:56005023-56005042 Msa0300580:intron 35.0%
GGAATTTGAAGAACAAGTGA+AGG - chr2_3:56005047-56005066 Msa0300580:CDS 35.0%
!! AGTGAAGGGCATTAAATCAA+AGG - chr2_3:56005062-56005081 Msa0300580:CDS 35.0%
! TTGATTTGAAGTCCTCAACT+TGG + chr2_3:56005125-56005144 None:intergenic 35.0%
TAAAAGACGATGGAATGAAC+TGG - chr2_3:56005158-56005177 Msa0300580:CDS 35.0%
TTTGATGGGGAAAAAGAATC+CGG - chr2_3:56005324-56005343 Msa0300580:CDS 35.0%
TTTGGGTGTGATATGAAATC+TGG + chr2_3:56005508-56005527 None:intergenic 35.0%
! TTAGAGAAGCCTTTTGTACA+TGG + chr2_3:56005942-56005961 None:intergenic 35.0%
CTTGAGAGTCTAGACATAAA+TGG + chr2_3:56006000-56006019 None:intergenic 35.0%
AGCAAAATAAGCAGTACAAG+TGG - chr2_3:56006032-56006051 Msa0300580:CDS 35.0%
TTGCTAAACAAGCTCTTCAT+TGG + chr2_3:56006132-56006151 None:intergenic 35.0%
! TTTTCTGTCCAGTTGTATAG+AGG + chr2_3:56006175-56006194 None:intergenic 35.0%
AGATAATCTAGGGAAAGTCA+TGG + chr2_3:56006228-56006247 None:intergenic 35.0%
TATTGGAATGAACTGGATCT+TGG + chr2_3:56006286-56006305 None:intergenic 35.0%
! TTTTGACACAGTGGAATAAC+GGG + chr2_3:56006620-56006639 None:intergenic 35.0%
! CTTTTGACACAGTGGAATAA+CGG + chr2_3:56006621-56006640 None:intergenic 35.0%
GTTATTCCACTGTGTCAAAA+GGG - chr2_3:56006620-56006639 Msa0300580:CDS 35.0%
TGAAAATTCTTTGGCTGTTC+TGG - chr2_3:56006784-56006803 Msa0300580:CDS 35.0%
GAAAATTCTTTGGCTGTTCT+GGG - chr2_3:56006785-56006804 Msa0300580:CDS 35.0%
!!! CTGCTGCTTTTGTCAATTTA+TGG - chr2_3:56006812-56006831 Msa0300580:CDS 35.0%
CATTTATGGTGAACATGGTA+TGG - chr2_3:56007116-56007135 Msa0300580:CDS 35.0%
TCGAAACCAAATCACCTATA+TGG - chr2_3:56007296-56007315 Msa0300580:CDS 35.0%
!!! TTTCAATGGAGTTGGTTTTC+AGG + chr2_3:56007568-56007587 None:intergenic 35.0%
AACCAACTCCATTGAAATCA+AGG - chr2_3:56007571-56007590 Msa0300580:CDS 35.0%
AACCTTGATTTCAATGGAGT+TGG + chr2_3:56007576-56007595 None:intergenic 35.0%
CAGAAGAACCTTGATTTCAA+TGG + chr2_3:56007582-56007601 None:intergenic 35.0%
GTTACTGTATACTTGAACTC+AGG - chr2_3:56007684-56007703 Msa0300580:CDS 35.0%
GTATACTTGAACTCAGGATA+AGG - chr2_3:56007690-56007709 Msa0300580:CDS 35.0%
ACTAGCAATTTCTTCATCTC+TGG + chr2_3:56007716-56007735 None:intergenic 35.0%
! ATGAAGAAATTGCTAGTCTG+AGG - chr2_3:56007719-56007738 Msa0300580:CDS 35.0%
TGTAATCCGAAATGCATTGT+AGG + chr2_3:56007750-56007769 None:intergenic 35.0%
ATTTGAGGATCTGCTTCTTA+AGG - chr2_3:56007777-56007796 Msa0300580:CDS 35.0%
! CTTGAGCTAAAAGCACATAA+AGG - chr2_3:56007817-56007836 Msa0300580:CDS 35.0%
CAACTTGATGCAAAGAAATG+GGG - chr2_3:56007862-56007881 Msa0300580:CDS 35.0%
GATACGCCAAAAATTTGTGG+TGG - chr2_3:56002306-56002325 Msa0300580:three_prime_UTR 40.0%
! TCACCACCACCACAAATTTT+TGG + chr2_3:56002315-56002334 None:intergenic 40.0%
! TGGTGATGATGATGTGAAGA+AGG - chr2_3:56002329-56002348 Msa0300580:three_prime_UTR 40.0%
TCATCAAACAGCCTCTTAAC+TGG + chr2_3:56002426-56002445 None:intergenic 40.0%
TCATTGCCGTGATCATCATA+TGG + chr2_3:56002492-56002511 None:intergenic 40.0%
GTCTAGTATGTCTAAAAGGC+AGG - chr2_3:56002530-56002549 Msa0300580:CDS 40.0%
GCTGATGAATGAACTTGCAT+TGG - chr2_3:56002581-56002600 Msa0300580:CDS 40.0%
GCAGAGAAAAGTTGAAGTGA+AGG - chr2_3:56002752-56002771 Msa0300580:intron 40.0%
TGAATGTACTGTGGAACTTC+AGG - chr2_3:56002809-56002828 Msa0300580:CDS 40.0%
TGCATCAAGATCTCTCTCTT+TGG + chr2_3:56002835-56002854 None:intergenic 40.0%
GAATAGCTGTGCTCTAATGA+TGG - chr2_3:56002935-56002954 Msa0300580:intron 40.0%
GCAATTTAAAGGCCGAGTTA+AGG - chr2_3:56002977-56002996 Msa0300580:intron 40.0%
TCAAAGGAGAAGGAACTTGA+AGG - chr2_3:56003134-56003153 Msa0300580:intron 40.0%
AAGAGATGCAACATGAAGGT+CGG - chr2_3:56003180-56003199 Msa0300580:intron 40.0%
TCAATACCAGCTGCATCATT+TGG + chr2_3:56003223-56003242 None:intergenic 40.0%
!! GCCTTCAAGTTGATTCTCTT+TGG + chr2_3:56003285-56003304 None:intergenic 40.0%
TCAACTTGAAGGCCAATTGA+AGG - chr2_3:56003292-56003311 Msa0300580:intron 40.0%
GGAGCATGAATTAAAGGAGA+AGG - chr2_3:56003313-56003332 Msa0300580:intron 40.0%
AGGAGCTCAAATCAAGAATG+AGG - chr2_3:56003387-56003406 Msa0300580:intron 40.0%
GGAATTTGAAGGTGAACTGA+AGG - chr2_3:56003577-56003596 Msa0300580:CDS 40.0%
GCATTTCGAAAGCCAAATGA+AGG - chr2_3:56003703-56003722 Msa0300580:CDS 40.0%
TTGATTCATGCTCCTTCACT+CGG + chr2_3:56003760-56003779 None:intergenic 40.0%
!! GAAGCATTTTGAAAGCCAAG+TGG - chr2_3:56003826-56003845 Msa0300580:CDS 40.0%
ACAGAAGAGAGGCTATTGAA+AGG - chr2_3:56003860-56003879 Msa0300580:CDS 40.0%
GAGAATTTGAAGGCCAAATG+AGG - chr2_3:56003786-56003805 Msa0300580:CDS 40.0%
TAGATTCCAGTTCCCTCATT+TGG + chr2_3:56004012-56004031 None:intergenic 40.0%
!! GAAGCATTTTGAAAGCCAAG+TGG - chr2_3:56003826-56003845 Msa0300580:CDS 40.0%
TTGACTCAAACTCCTTCACA+CGG + chr2_3:56004138-56004157 None:intergenic 40.0%
TTGATTCATGCTCCTTCACT+CGG + chr2_3:56003760-56003779 None:intergenic 40.0%
!! TGAATGCCAAATGATGGACT+TGG - chr2_3:56004339-56004358 Msa0300580:intron 40.0%
! GGACTTGGTATCAAAACAGA+AGG - chr2_3:56004354-56004373 Msa0300580:intron 40.0%
TTGAATCAAGCTCCCTCATT+CGG + chr2_3:56004390-56004409 None:intergenic 40.0%
AAAGTTTGAAGGCCAAGTGA+AGG - chr2_3:56004417-56004436 Msa0300580:intron 40.0%
TTGACTCTAACTCCTTCACT+TGG + chr2_3:56004432-56004451 None:intergenic 40.0%
! CCTTCATTTTGCCTACAAGT+TGG + chr2_3:56004462-56004481 None:intergenic 40.0%
CCAACTTGTAGGCAAAATGA+AGG - chr2_3:56004459-56004478 Msa0300580:intron 40.0%
TTGACTCAAGCTCCTTCATT+TGG + chr2_3:56004558-56004577 None:intergenic 40.0%
ATGAAGGAGCTTGAGTCAAA+AGG - chr2_3:56004559-56004578 Msa0300580:intron 40.0%
TGAAGGAGCTTGAGTCAAAA+GGG - chr2_3:56004560-56004579 Msa0300580:intron 40.0%
! GAAGCATTTCGAAAGCATGA+TGG - chr2_3:56004666-56004685 Msa0300580:intron 40.0%
TCCAAAGAGAAGCAACTTGA+TGG - chr2_3:56004742-56004761 Msa0300580:intron 40.0%
CCATCACTTGTCTTTCAAAG+TGG + chr2_3:56004798-56004817 None:intergenic 40.0%
! CCACTTTGAAAGACAAGTGA+TGG - chr2_3:56004795-56004814 Msa0300580:intron 40.0%
GGAGTTTGAGTCAAAGAAGA+AGG - chr2_3:56004816-56004835 Msa0300580:intron 40.0%
GGAATTTGAAGGCCAATTGA+AGG - chr2_3:56004837-56004856 Msa0300580:intron 40.0%
GAAGGAGCTTGAATCAAAAG+AGG - chr2_3:56004981-56005000 Msa0300580:intron 40.0%
GGAGTTTCAATCAAAAGAGG+AGG - chr2_3:56005026-56005045 Msa0300580:CDS 40.0%
!! GAAGGGCATTAAATCAAAGG+AGG - chr2_3:56005065-56005084 Msa0300580:CDS 40.0%
GGAGGAACTCAAATCACAAA+AGG - chr2_3:56005086-56005105 Msa0300580:CDS 40.0%
GCATTTGAAAAGCCAAGTTG+AGG - chr2_3:56005110-56005129 Msa0300580:CDS 40.0%
AGCAGCGATTTAAAAGACGA+TGG - chr2_3:56005148-56005167 Msa0300580:CDS 40.0%
GAGAGTCTAGACATAAATGG+AGG + chr2_3:56005997-56006016 None:intergenic 40.0%
TCAACCTTCCTCTATACAAC+TGG - chr2_3:56006164-56006183 Msa0300580:CDS 40.0%
GATCGATTAAGTCGTACCAT+TGG - chr2_3:56006467-56006486 Msa0300580:CDS 40.0%
TTGGACACAAGTGAGAAAAC+TGG - chr2_3:56006506-56006525 Msa0300580:CDS 40.0%
TTTGACACAGTGGAATAACG+GGG + chr2_3:56006619-56006638 None:intergenic 40.0%
CGTTATTCCACTGTGTCAAA+AGG - chr2_3:56006619-56006638 Msa0300580:CDS 40.0%
GTTGTTCGAGCAGATAGATT+TGG + chr2_3:56006673-56006692 None:intergenic 40.0%
AAACATACCCGAAACTCTGT+TGG + chr2_3:56006936-56006955 None:intergenic 40.0%
!!! TTTGCCCTGTTTTTGTCCTA+CGG - chr2_3:56007229-56007248 Msa0300580:CDS 40.0%
AGAACCGTAGGACAAAAACA+GGG + chr2_3:56007236-56007255 None:intergenic 40.0%
TAGAACCGTAGGACAAAAAC+AGG + chr2_3:56007237-56007256 None:intergenic 40.0%
! GTTTTTGTCCTACGGTTCTA+TGG - chr2_3:56007237-56007256 Msa0300580:CDS 40.0%
TGCTAGCGTATGTGTGAAAA+TGG + chr2_3:56007645-56007664 None:intergenic 40.0%
GACTGTCCTACAATGCATTT+CGG - chr2_3:56007741-56007760 Msa0300580:CDS 40.0%
GATGCAAAGAAATGGGGTAA+TGG - chr2_3:56007868-56007887 Msa0300580:CDS 40.0%
! CTTGGCTACCTTTTTCTTTC+TGG - chr2_3:56008030-56008049 Msa0300580:CDS 40.0%
ACGCCAAAAATTTGTGGTGG+TGG - chr2_3:56002309-56002328 Msa0300580:three_prime_UTR 45.0%
CTGCTACACTTCCAGTTAAG+AGG - chr2_3:56002412-56002431 Msa0300580:three_prime_UTR 45.0%
GCGCAACCATATGATGATCA+CGG - chr2_3:56002483-56002502 Msa0300580:three_prime_UTR 45.0%
TGCAAGTTCATTCATCAGCG+AGG + chr2_3:56002580-56002599 None:intergenic 45.0%
AGTGAAGGAAGAGGAACTGA+AGG - chr2_3:56002767-56002786 Msa0300580:intron 45.0%
!! GTCAAAGGAGAAGCACTTTG+AGG - chr2_3:56003049-56003068 Msa0300580:intron 45.0%
!! AGGAGAAGCACTTTGAGGAA+CGG - chr2_3:56003054-56003073 Msa0300580:intron 45.0%
AGAGATGCAACATGAAGGTC+GGG - chr2_3:56003181-56003200 Msa0300580:intron 45.0%
TGAATGCCAAATGATGCAGC+TGG - chr2_3:56003214-56003233 Msa0300580:intron 45.0%
GCATTGTGAAAGCCAAGTGA+AGG - chr2_3:56003250-56003269 Msa0300580:intron 45.0%
! GAAGCATTTCGAAGGCATGA+TGG - chr2_3:56003364-56003383 Msa0300580:intron 45.0%
TGAAGGCCAAATGAAGGAAC+TGG - chr2_3:56003793-56003812 Msa0300580:CDS 45.0%
!! GCATTTTGAAAGCCAAGTGG+AGG - chr2_3:56003829-56003848 Msa0300580:CDS 45.0%
AGGAGCTCAAAACAGAAGAG+AGG - chr2_3:56003849-56003868 Msa0300580:CDS 45.0%
TTGAGTCATGCTCCTTCACT+CGG + chr2_3:56003970-56003989 None:intergenic 45.0%
!! GCATTTTGAAAGCCAAGTGG+AGG - chr2_3:56003829-56003848 Msa0300580:CDS 45.0%
GCAATTTGATTGCCGTGTGA+AGG - chr2_3:56004123-56004142 Msa0300580:intron 45.0%
TGAAGGCCAAATGAAGGATC+TGG - chr2_3:56004213-56004232 Msa0300580:intron 45.0%
! GCAGGTTGAAAGCCAAGTTA+AGG - chr2_3:56004249-56004268 Msa0300580:intron 45.0%
GAGGGGATTTGAATGCCAAA+TGG - chr2_3:56004498-56004517 Msa0300580:intron 45.0%
GGGATTTGAATGCCAAATGG+AGG - chr2_3:56004501-56004520 Msa0300580:intron 45.0%
TCAATACCTGCTCCTCCATT+TGG + chr2_3:56004516-56004535 None:intergenic 45.0%
AAGGGAAGCAACTTGAAGAC+CGG - chr2_3:56004578-56004597 Msa0300580:intron 45.0%
TTGATTCATGCTCCTGCAAC+CGG + chr2_3:56004600-56004619 None:intergenic 45.0%
! GTTGCAGGAGCATGAATCAA+AGG - chr2_3:56004600-56004619 Msa0300580:intron 45.0%
AGAATTTGAAGGTCGAGCGA+AGG - chr2_3:56004627-56004646 Msa0300580:intron 45.0%
! GCATTTCGAAAGCATGATGG+TGG - chr2_3:56004669-56004688 Msa0300580:intron 45.0%
! GCCATCAAGTTGCTTCTCTT+TGG + chr2_3:56004746-56004765 None:intergenic 45.0%
TAGATTCCACCTCCTTCACT+TGG + chr2_3:56004768-56004787 None:intergenic 45.0%
GCGTGTCGAAAACCAAATGA+AGG - chr2_3:56004963-56004982 Msa0300580:intron 45.0%
GGGCATTAAATCAAAGGAGG+AGG - chr2_3:56005068-56005087 Msa0300580:CDS 45.0%
AAATAAAGGAGCCCGAGTCA+AGG - chr2_3:56005292-56005311 Msa0300580:CDS 45.0%
GAACTCTAACAGACTAGCAC+TGG - chr2_3:56005787-56005806 Msa0300580:CDS 45.0%
TGTCTAGACTCTCAAGTCTC+AGG - chr2_3:56006004-56006023 Msa0300580:CDS 45.0%
GTCTAGACTCTCAAGTCTCA+GGG - chr2_3:56006005-56006024 Msa0300580:CDS 45.0%
CTGTCCAGTTGTATAGAGGA+AGG + chr2_3:56006171-56006190 None:intergenic 45.0%
CTAGGGAAAGTCATGGAACT+TGG + chr2_3:56006221-56006240 None:intergenic 45.0%
CGATTAAGTCGTACCATTGG+TGG - chr2_3:56006470-56006489 Msa0300580:CDS 45.0%
! CTGCAAACTTGTTCCACCAA+TGG + chr2_3:56006486-56006505 None:intergenic 45.0%
TGGTGGAACAAGTTTGCAGT+TGG - chr2_3:56006487-56006506 Msa0300580:CDS 45.0%
GACACAAGTGAGAAAACTGG+TGG - chr2_3:56006509-56006528 Msa0300580:CDS 45.0%
! TTGTCACCCTTTTGACACAG+TGG + chr2_3:56006629-56006648 None:intergenic 45.0%
AAACTCTGTTGGCAAAACCC+AGG + chr2_3:56006925-56006944 None:intergenic 45.0%
! GGGTTTTGCCAACAGAGTTT+CGG - chr2_3:56006925-56006944 Msa0300580:CDS 45.0%
! GGTTTTGCCAACAGAGTTTC+GGG - chr2_3:56006926-56006945 Msa0300580:CDS 45.0%
GACTGCGCATAAGAATGGTA+GGG + chr2_3:56007027-56007046 None:intergenic 45.0%
TGACTGCGCATAAGAATGGT+AGG + chr2_3:56007028-56007047 None:intergenic 45.0%
TACCATTCTTATGCGCAGTC+AGG - chr2_3:56007027-56007046 Msa0300580:CDS 45.0%
ATCCTGACTGCGCATAAGAA+TGG + chr2_3:56007032-56007051 None:intergenic 45.0%
ATCGTGATCCATAGAACCGT+AGG + chr2_3:56007248-56007267 None:intergenic 45.0%
ACTGCTCTCACAAATCAGTC+TGG + chr2_3:56007543-56007562 None:intergenic 45.0%
GAAGCAGTGTGAAGAACGAG+TGG - chr2_3:56003016-56003035 Msa0300580:intron 50.0%
AGTGGAGGAGCTTCAGTCAA+AGG - chr2_3:56003034-56003053 Msa0300580:intron 50.0%
!! GGAGAAGCACTTTGAGGAAC+GGG - chr2_3:56003055-56003074 Msa0300580:intron 50.0%
!! GCACTTTGAGGAACGGGTTA+AGG - chr2_3:56003061-56003080 Msa0300580:intron 50.0%
GGAACTTGAAGGACGAGCAA+TGG - chr2_3:56003145-56003164 Msa0300580:intron 50.0%
GAAGGAATTTGAAGGCCGTG+TGG - chr2_3:56003331-56003350 Msa0300580:intron 50.0%
! GCATTTCGAAGGCATGATGG+AGG - chr2_3:56003367-56003386 Msa0300580:intron 50.0%
TCAACTTGAAGGCCGAGTGA+AGG - chr2_3:56003535-56003554 Msa0300580:CDS 50.0%
GCAACATGAAAGCCGAGTGA+AGG - chr2_3:56003745-56003764 Msa0300580:CDS 50.0%
!! CTGTTTTGAGCTCCTCCACT+TGG + chr2_3:56003844-56003863 None:intergenic 50.0%
GCAACATGAAAGCCGAGTGA+AGG - chr2_3:56003745-56003764 Msa0300580:CDS 50.0%
TGAAGGCCAAATGAGGGAAC+TGG - chr2_3:56004003-56004022 Msa0300580:intron 50.0%
! TTGCTTTGAGCTCCTCCACT+TGG + chr2_3:56004054-56004073 None:intergenic 50.0%
GCAACATGAAAGCCGAGTGA+AGG - chr2_3:56003745-56003764 Msa0300580:CDS 50.0%
TGAATGCCAAATGGAGGAGC+AGG - chr2_3:56004507-56004526 Msa0300580:intron 50.0%
! GCAACTTGATGGCCAAGTGA+AGG - chr2_3:56004753-56004772 Msa0300580:intron 50.0%
! ACTTGATGGCCAAGTGAAGG+AGG - chr2_3:56004756-56004775 Msa0300580:intron 50.0%
!! ACTAGCACTGGCTCCAGTTA+AGG - chr2_3:56005799-56005818 Msa0300580:CDS 50.0%
GATCTTGGCGAGGAAAGATG+TGG + chr2_3:56006271-56006290 None:intergenic 50.0%
GAATGAACTGGATCTTGGCG+AGG + chr2_3:56006281-56006300 None:intergenic 50.0%
GAAGCTAGCGCGTGATTTGA+AGG - chr2_3:56006742-56006761 Msa0300580:CDS 50.0%
TGCTATGCACGAAATTGCCG+TGG - chr2_3:56006886-56006905 Msa0300580:CDS 50.0%
GAAATTGCCGTGGAGCTGTT+TGG - chr2_3:56006896-56006915 Msa0300580:CDS 50.0%
TCTTATGCGCAGTCAGGATG+AGG - chr2_3:56007033-56007052 Msa0300580:CDS 50.0%
GATCACGGCAATGACGCAGA+TGG - chr2_3:56002498-56002517 Msa0300580:three_prime_UTR 55.0%
GCAGTGTGAAGAACGAGTGG+AGG - chr2_3:56003019-56003038 Msa0300580:intron 55.0%
!! TGAGGAACGGGTTAAGGAGC+TGG - chr2_3:56003067-56003086 Msa0300580:intron 55.0%
GCAACATGAAGGTCGGGTGA+AGG - chr2_3:56003187-56003206 Msa0300580:intron 55.0%
TGGACTCGAGCTCCTTCACT+TGG + chr2_3:56003265-56003284 None:intergenic 55.0%
GCAACTTGAAGACCGGTTGC+AGG - chr2_3:56004585-56004604 Msa0300580:intron 55.0%
TGATGGCCAAGTGAAGGAGG+TGG - chr2_3:56004759-56004778 Msa0300580:intron 55.0%
GCGAGGAAAGATGTGGATGC+TGG + chr2_3:56006264-56006283 None:intergenic 55.0%
CAGGCTTCCAAACAGCTCCA+CGG + chr2_3:56006906-56006925 None:intergenic 55.0%
GTGGAGCTGTTTGGAAGCCT+GGG - chr2_3:56006905-56006924 Msa0300580:CDS 55.0%
TATGCGCAGTCAGGATGAGG+TGG - chr2_3:56007036-56007055 Msa0300580:CDS 55.0%
TGAAGGTCGAGCGAAGGAGC+TGG - chr2_3:56004633-56004652 Msa0300580:intron 60.0%
CGTGGAGCTGTTTGGAAGCC+TGG - chr2_3:56006904-56006923 Msa0300580:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 56002288 56008083 56002288 ID=Msa0300580;Name=Msa0300580
chr2_3 mRNA 56002288 56008083 56002288 ID=Msa0300580-mRNA-1;Parent=Msa0300580;Name=Msa0300580-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|1|0.75|1|1|1|4|237|1289
chr2_3 exon 56002288 56002665 56002288 ID=Msa0300580-mRNA-1:exon:17944;Parent=Msa0300580-mRNA-1
chr2_3 exon 56002779 56002951 56002779 ID=Msa0300580-mRNA-1:exon:17943;Parent=Msa0300580-mRNA-1
chr2_3 exon 56003424 56003921 56003424 ID=Msa0300580-mRNA-1:exon:17942;Parent=Msa0300580-mRNA-1
chr2_3 exon 56005026 56008083 56005026 ID=Msa0300580-mRNA-1:exon:17941;Parent=Msa0300580-mRNA-1
chr2_3 CDS 56005026 56008083 56005026 ID=Msa0300580-mRNA-1:cds;Parent=Msa0300580-mRNA-1
chr2_3 CDS 56003424 56003921 56003424 ID=Msa0300580-mRNA-1:cds;Parent=Msa0300580-mRNA-1
chr2_3 CDS 56002779 56002951 56002779 ID=Msa0300580-mRNA-1:cds;Parent=Msa0300580-mRNA-1
chr2_3 CDS 56002525 56002665 56002525 ID=Msa0300580-mRNA-1:cds;Parent=Msa0300580-mRNA-1
chr2_3 three_prime_UTR 56002288 56002524 56002288 ID=Msa0300580-mRNA-1:three_prime_utr;Parent=Msa0300580-mRNA-1
Gene Sequence

>Msa0300580

ATGGATGTTGAGTCTTCTGATACGCCAAAAATTTGTGGTGGTGGTGATGATGATGTGAAGAAGGAACCTGTTTCTTGTCAAGACTTTGAATCATGTTTTAGAACATGTAGTAGTAAACATGATACTGCTACACTTCCAGTTAAGAGGCTGTTTGATGACAGCGATTCATTCGATATTTCTGTTAAGAAATCAAAAGCGCAACCATATGATGATCACGGCAATGACGCAGATGGTATTCCTTCGTCTAGTATGTCTAAAAGGCAGGGCAGATCTACTACTGAATCATTTTCCTCGCTGATGAATGAACTTGCATTGGCACAAAAGTCGTTTAAGAAATGCAAAAGGAAGAGTCGAGTAGAAAAAGAGAGATTGCAATGCATAAAGAAAGATATTGAAGAGTGCTGCAAAGAGCTTGAAGATAAGAACAAGCAAGTTAGTTGTGTTAATGAAATTCACAACGAAATGCAGAGAAAAGTTGAAGTGAAGGAAGAGGAACTGAAGGCTCTTTCCCAAAAAATTGCTGAATGTACTGTGGAACTTCAGGCCAAAGAGAGAGATCTTGATGCAACAAACAAATTAATTGCTGAAGAAGCAGAAAAATTAGAGTCTACAAAGAAGATATCGATAAATATAATATCAAAAATGAAGAATAGCTGTGCTCTAATGATGGACTTTGAGTCAGAGCAGAAGCAATTTAAAGGCCGAGTTAAGGAACTTGAGTCAAAAGAGAAGCAGTGTGAAGAACGAGTGGAGGAGCTTCAGTCAAAGGAGAAGCACTTTGAGGAACGGGTTAAGGAGCTGGAGTCAAAAGAGAAGCAGCTTGAAGTCCGTGTGAAAGAATTTGAATCAAAGGAGAAGGAACTTGAAGGACGAGCAATGGAGCTAGAGACAAAAGAGATGCAACATGAAGGTCGGGTGAAGGAATTTGAATGCCAAATGATGCAGCTGGTATTGAATCAGAAGCATTGTGAAAGCCAAGTGAAGGAGCTCGAGTCCAAAGAGAATCAACTTGAAGGCCAATTGAAGGAGCATGAATTAAAGGAGAAGGAATTTGAAGGCCGTGTGGAATCTAAAAAGAAGCATTTCGAAGGCATGATGGAGGAGCTCAAATCAAGAATGAGGTCTTTGAAAGAACAAGTTGAGGAACTTGACTCTAAAGAGAAGCAACTTGATCATCAAATTAAAGAGCTAGAATCTAAAAAGGACCACTTTGAAAAACAAGTGAAGGAGTTTGAGTCAAAAGAGAGTCAACTTGAAGGCCGAGTGAAGGAATTTGAATCAAAAAAGAAGGAATTTGAAGGTGAACTGAAGGAGTTTGAGTCAAAAGATAACAAATTTGCTGGCAAAGTAAAGGAGTTTGAATCAAAAGAGAAGGAATTTGAATGCCAAATGATGGATTTGCTATCAAAACAGAAGCATTTCGAAAGCCAAATGAAGGAGTTTGAGTCAAAAGAGAAGCAACATGAAAGCCGAGTGAAGGAGCATGAATCAAAAGAGAGAGAATTTGAAGGCCAAATGAAGGAACTGGAATCTAAAAGGAAGCATTTTGAAAGCCAAGTGGAGGAGCTCAAAACAGAAGAGAGGCTATTGAAAGGACAAGTTAAGGAACTTGAGTCTAAAGAGAAGCAATTTGATGTCCGTGTGAAAGAGTTTGAGTCAAAAGAGAAGCAACATGAAAGCCGAGTGAAGGAGCATGACTCAAAAGAGAGAGAATTTGAAGGCCAAATGAGGGAACTGGAATCTAAAAAGAAGCATTTTGAAAGCCAAGTGGAGGAGCTCAAAGCAAAAGAGAAGCAATTGAAAGGAGAAGTTAAGGAACTTGAGTCTAGAGAGAAGCAATTTGATTGCCGTGTGAAGGAGTTTGAGTCAAAAGAGAAGCAACATGAAAGCCGAGTGAAGGAGCATGAATCAAAAGAGAGAGAATTTGAAGGCCAAATGAAGGATCTGGAATCTAAAAAGAAGCAGGTTGAAAGCCAAGTTAAGGAGTTAGAGTCTAAAGATAACCAACTTGTAGGCAAAGTAAAAGATTTTGAGTTTAAAGAGAAGGAATTTGAATGCCAAATGATGGACTTGGTATCAAAACAGAAGGATTTTGAAAACCGAATGAGGGAGCTTGATTCAAAAGAGAGAAAGTTTGAAGGCCAAGTGAAGGAGTTAGAGTCAAAAGATAACCAACTTGTAGGCAAAATGAAGGAGTTTGAATCAAAAGAGAGGGGATTTGAATGCCAAATGGAGGAGCAGGTATTGAAACAGAAGCATTATGAAAGCCAAATGAAGGAGCTTGAGTCAAAAGGGAAGCAACTTGAAGACCGGTTGCAGGAGCATGAATCAAAGGAGAAAGAATTTGAAGGTCGAGCGAAGGAGCTGGAATCTAAAAAGAAGCATTTCGAAAGCATGATGGTGGAGCTCAAATCAAAATTGAGGCTATTGAAAGTACAATTTCAGGAATTTGACTCCAAAGAGAAGCAACTTGATGGCCAAGTGAAGGAGGTGGAATCTAAAAAGAACCACTTTGAAAGACAAGTGATGGAGTTTGAGTCAAAGAAGAAGGAATTTGAAGGCCAATTGAAGGAATTACAGTCAAAAGATAACGAACTTATAGGCAAAATAATGAAGTTTGAAACAAAAGAAAAGGAATTTGAATGCCAAATGATGGACTTGCTATCAAATCAGAAGCGTGTCGAAAACCAAATGAAGGAGCTTGAATCAAAAGAGGAGAAATTCGAAGGAAAAGTGAAGGAGTTTCAATCAAAAGAGGAGGAATTTGAAGAACAAGTGAAGGGCATTAAATCAAAGGAGGAGGAACTCAAATCACAAAAGGAGCATTTGAAAAGCCAAGTTGAGGACTTCAAATCAAAAGAGCAGCGATTTAAAAGACGATGGAATGAACTGGAGTTGAAAGAGTATAAGTTCAAAGTAAAGTTGAAGGAGCTCAACTTAAAAGAAAAGCAGTTTGAAGGACAAGTCAACAATCCTGAGTCAAAGCTGAATAAATTTGATGGACAAATAAAGGAGCCCGAGTCAAGGAAATATTATTTTGATGGGGAAAAAGAATCCGTTGAATCTTACATGGATGATCGATTAAGTCGTACCATTGGTGGAACAAGTTTGCAGTTGGACACAAGTGAGAAAACTGGTGGAGTTGCATCGCTTTACAATAGAATTTTAGTTAGTATGCGAGAATCATCAGATCCATCAAAACTTGTTTTGGATATGATATTGAACCCCGTTATTCCACTGTGTCAAAAGGGTGACAATTCTGTGATTATTGCTGATTACCAAATCTATCTGCTCGAACAACTGATGAGAACCTCACCAAAAATTGAAACTTGTGTAAAAAAAGAAGCATTGAAGCTAGCGCGTGATTTGAAGGCTAACATGAAAGAAAATACTGAAAATTCTTTGGCTGTTCTGGGTTTTCTGCTGCTTTTGTCAATTTATGGGTTGCTTGATTATTTTAACGAAGATGAAGTTTTGGAGCTTTTTGCATTTGTTGCTATGCACGAAATTGCCGTGGAGCTGTTTGGAAGCCTGGGTTTTGCCAACAGAGTTTCGGATTTTGTTAAGCATCTTATCAAGAGGAAACAATTTGTTGAAGCTGTTAGATTCAGTTGTGCATATAACTTGGATGACAAGAATCGATTAGTTGATATGTTGCGAGAACACATTCAGAATGCCAGACTGATTTGTGAGAGCAGTTGCCTGAAAACCAACTCCATTGAAATCAAGGATAAGGCCAGAGATGAAGAAATTGCTAGTCTGAGGACTGTCCTACAATGCATTTCGGATTACAAACTAGAATTTGAGGATCTGCTTCTTAAGGAGATTGAATATCGCATTCTTGAGCTAAAAGCACATAAAGGCAATTAG
Protein sequence

>Msa0300580

MDVESSDTPKICGGGDDDVKKEPVSCQDFESCFRTCSSKHDTATLPVKRLFDDSDSFDISVKKSKAQPYDDHGNDADGIPSSSMSKRQGRSTTESFSSLMNELALAQKSFKKCKRKSRVEKERLQCIKKDIEECCKELEDKNKQVSCVNEIHNEMQRKVEVKEEELKALSQKIAECTVELQAKERDLDATNKLIAEEAEKLESTKKISINIISKMKNSCALMMDFESEQKQFKGRVKELESKEKQCEERVEELQSKEKHFEERVKELESKEKQLEVRVKEFESKEKELEGRAMELETKEMQHEGRVKEFECQMMQLVLNQKHCESQVKELESKENQLEGQLKEHELKEKEFEGRVESKKKHFEGMMEELKSRMRSLKEQVEELDSKEKQLDHQIKELESKKDHFEKQVKEFESKESQLEGRVKEFESKKKEFEGELKEFESKDNKFAGKVKEFESKEKEFECQMMDLLSKQKHFESQMKEFESKEKQHESRVKEHESKEREFEGQMKELESKRKHFESQVEELKTEERLLKGQVKELESKEKQFDVRVKEFESKEKQHESRVKEHDSKEREFEGQMRELESKKKHFESQVEELKAKEKQLKGEVKELESREKQFDCRVKEFESKEKQHESRVKEHESKEREFEGQMKDLESKKKQVESQVKELESKDNQLVGKVKDFEFKEKEFECQMMDLVSKQKDFENRMRELDSKERKFEGQVKELESKDNQLVGKMKEFESKERGFECQMEEQVLKQKHYESQMKELESKGKQLEDRLQEHESKEKEFEGRAKELESKKKHFESMMVELKSKLRLLKVQFQEFDSKEKQLDGQVKEVESKKNHFERQVMEFESKKKEFEGQLKELQSKDNELIGKIMKFETKEKEFECQMMDLLSNQKRVENQMKELESKEEKFEGKVKEFQSKEEEFEEQVKGIKSKEEELKSQKEHLKSQVEDFKSKEQRFKRRWNELELKEYKFKVKLKELNLKEKQFEGQVNNPESKLNKFDGQIKEPESRKYYFDGEKESVESYMDDRLSRTIGGTSLQLDTSEKTGGVASLYNRILVSMRESSDPSKLVLDMILNPVIPLCQKGDNSVIIADYQIYLLEQLMRTSPKIETCVKKEALKLARDLKANMKENTENSLAVLGFLLLLSIYGLLDYFNEDEVLELFAFVAMHEIAVELFGSLGFANRVSDFVKHLIKRKQFVEAVRFSCAYNLDDKNRLVDMLREHIQNARLICESSCLKTNSIEIKDKARDEEIASLRTVLQCISDYKLEFEDLLLKEIEYRILELKAHKGN*