AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0301640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0301640 MtrunA17_Chr2g0327241 99.805 513 1 0 1 513 1 513 0.0 1055
Msa0301640 MtrunA17_Chr2g0327241 96.774 124 4 0 511 634 602 725 1.50e-73 250
Msa0301640 MtrunA17_Chr6g0477811 41.447 456 250 8 67 513 11 458 8.67e-102 325
Msa0301640 MtrunA17_Chr6g0477811 33.133 166 97 6 455 609 484 646 1.09e-14 77.8
Msa0301640 MtrunA17_Chr4g0039251 39.810 422 238 6 104 513 70 487 8.01e-89 291
Msa0301640 MtrunA17_Chr4g0039251 41.837 98 52 4 515 609 580 675 4.83e-11 65.9
Msa0301640 MtrunA17_Chr4g0039261 39.141 419 245 5 104 513 28 445 3.38e-88 288
Msa0301640 MtrunA17_Chr4g0050251 38.480 421 242 6 101 513 47 458 1.48e-84 279
Msa0301640 MtrunA17_Chr4g0050251 29.655 145 92 3 474 609 505 648 6.37e-15 78.2
Msa0301640 MtrunA17_Chr4g0050291 38.679 424 235 8 104 513 25 437 4.66e-84 277
Msa0301640 MtrunA17_Chr4g0050291 33.562 146 85 4 474 609 484 627 9.23e-16 80.9
Msa0301640 MtrunA17_Chr4g0050261 36.784 454 245 7 101 513 47 499 1.02e-83 278
Msa0301640 MtrunA17_Chr4g0050261 36.893 103 60 2 511 609 588 689 1.21e-14 77.4
Msa0301640 MtrunA17_Chr4g0050221 35.800 419 248 9 103 513 9 414 1.19e-73 248
Msa0301640 MtrunA17_Chr4g0050221 31.788 151 87 5 474 615 461 604 5.04e-13 72.0
Msa0301640 MtrunA17_Chr4g0039231 38.028 355 211 4 167 513 1 354 3.13e-67 231
Msa0301640 MtrunA17_Chr4g0039231 39.394 99 55 4 514 609 496 592 2.17e-12 70.1
Msa0301640 MtrunA17_Chr4g0026731 38.400 375 202 8 159 514 12 376 7.21e-66 227
Msa0301640 MtrunA17_Chr4g0026731 39.216 102 57 2 511 608 476 576 4.50e-16 82.0
Msa0301640 MtrunA17_Chr4g0050201 35.484 310 183 6 169 472 5 303 2.26e-51 186
Msa0301640 MtrunA17_Chr4g0050201 31.818 154 91 5 474 621 394 539 5.67e-11 65.5
Msa0301640 MtrunA17_Chr2g0318061 33.829 269 160 5 126 379 31 296 1.23e-42 157
Msa0301640 MtrunA17_Chr1g0198931 30.053 376 233 10 46 403 15 378 2.90e-40 156
Msa0301640 MtrunA17_Chr1g0200651 35.887 248 153 5 119 362 82 327 8.89e-40 155
Msa0301640 MtrunA17_Chr5g0408061 34.028 288 168 9 89 362 22 301 1.14e-39 154
Msa0301640 MtrunA17_Chr5g0446901 29.975 407 247 11 55 456 46 419 4.69e-38 149
Msa0301640 MtrunA17_Chr8g0359931 33.333 303 169 7 109 384 52 348 8.85e-38 149
Msa0301640 MtrunA17_Chr3g0102731 36.709 237 144 4 125 358 97 330 1.34e-36 144
Msa0301640 MtrunA17_Chr1g0180971 36.047 258 155 7 106 358 396 648 3.69e-36 145
Msa0301640 MtrunA17_Chr1g0176451 33.591 259 167 4 114 368 10 267 7.28e-36 142
Msa0301640 MtrunA17_Chr7g0267971 32.384 281 173 7 90 362 126 397 1.35e-34 140
Msa0301640 MtrunA17_Chr7g0264441 34.615 260 156 7 106 358 262 514 1.81e-34 140
Msa0301640 MtrunA17_Chr1g0176441 31.783 258 172 3 114 368 158 414 3.42e-34 139
Msa0301640 MtrunA17_Chr1g0208391 33.088 272 173 6 92 355 56 326 1.24e-32 134
Msa0301640 MtrunA17_Chr1g0199471 31.907 257 165 6 107 358 501 752 1.29e-32 134
Msa0301640 MtrunA17_Chr5g0411621 32.841 271 169 6 107 367 25 292 5.57e-32 132
Msa0301640 MtrunA17_Chr4g0028621 34.211 266 161 7 100 358 484 742 2.44e-30 127
Msa0301640 MtrunA17_Chr7g0263351 32.812 256 160 5 131 376 132 385 3.59e-30 126
Msa0301640 MtrunA17_Chr1g0213091 26.812 414 279 9 123 515 119 529 4.57e-30 126
Msa0301640 MtrunA17_Chr8g0393191 31.183 279 178 6 100 367 36 311 5.17e-30 126
Msa0301640 MtrunA17_Chr2g0316301 29.508 427 241 14 120 526 67 453 2.36e-29 123
Msa0301640 MtrunA17_Chr7g0262251 25.974 462 300 15 119 549 168 618 9.70e-29 122
Msa0301640 MtrunA17_Chr7g0262251 33.014 209 132 6 123 325 822 1028 1.24e-21 100
Msa0301640 MtrunA17_Chr8g0384391 27.098 417 277 9 126 526 56 461 2.87e-27 117
Msa0301640 MtrunA17_Chr8g0340651 28.321 399 232 14 125 497 904 1274 4.25e-27 117
Msa0301640 MtrunA17_Chr8g0340651 24.916 297 183 7 126 387 178 469 1.32e-22 103
Msa0301640 MtrunA17_Chr4g0003981 24.540 489 313 13 112 553 159 638 4.19e-26 114
Msa0301640 MtrunA17_Chr4g0003981 31.655 278 174 10 62 325 792 1067 1.40e-24 109
Msa0301640 MtrunA17_Chr2g0331081 27.217 327 214 8 32 339 785 1106 1.40e-25 112
Msa0301640 MtrunA17_Chr2g0331081 22.873 529 302 18 126 597 179 658 4.52e-24 108
Msa0301640 MtrunA17_Chr7g0262231 27.208 283 170 5 120 367 156 437 1.77e-25 112
Msa0301640 MtrunA17_Chr7g0262231 32.127 221 142 7 111 325 866 1084 2.98e-22 102
Msa0301640 MtrunA17_Chr2g0332241 23.404 517 328 13 120 598 161 647 2.08e-25 112
Msa0301640 MtrunA17_Chr2g0332241 32.579 221 141 6 111 325 839 1057 1.58e-23 106
Msa0301640 MtrunA17_Chr3g0130331 26.539 471 294 14 80 526 19 461 6.11e-25 109
Msa0301640 MtrunA17_Chr2g0332221 23.909 481 310 11 120 553 161 632 8.06e-25 110
Msa0301640 MtrunA17_Chr2g0332221 33.032 221 140 6 111 325 838 1056 5.09e-24 107
Msa0301640 MtrunA17_Chr7g0262221 29.044 272 161 7 120 367 157 420 1.22e-24 110
Msa0301640 MtrunA17_Chr7g0262221 33.333 204 130 6 126 325 854 1055 1.27e-20 97.1
Msa0301640 MtrunA17_Chr0c20g0493841 23.636 495 310 17 32 497 772 1227 1.38e-24 109
Msa0301640 MtrunA17_Chr7g0262241 27.208 283 170 5 120 367 156 437 2.42e-24 108
Msa0301640 MtrunA17_Chr7g0262241 34.450 209 129 7 123 325 875 1081 1.62e-22 103
Msa0301640 MtrunA17_Chr7g0265991 29.452 292 174 9 118 379 51 340 2.77e-24 107
Msa0301640 MtrunA17_Chr7g0261971 26.557 305 182 7 120 388 152 450 2.98e-24 108
Msa0301640 MtrunA17_Chr7g0261971 32.735 223 138 8 111 325 858 1076 6.49e-22 101
Msa0301640 MtrunA17_Chr5g0429871 25.166 453 281 17 125 559 666 1078 3.65e-24 108
Msa0301640 MtrunA17_Chr2g0332211 22.868 516 332 12 120 598 242 728 7.85e-24 107
Msa0301640 MtrunA17_Chr2g0332211 32.579 221 141 6 111 325 922 1140 2.12e-23 105
Msa0301640 MtrunA17_Chr4g0004021 24.846 487 298 16 120 553 165 636 8.41e-24 107
Msa0301640 MtrunA17_Chr4g0004021 33.824 204 129 5 126 325 863 1064 2.05e-23 105
Msa0301640 MtrunA17_Chr7g0261951 27.208 283 170 5 120 367 156 437 9.79e-24 107
Msa0301640 MtrunA17_Chr7g0261951 31.674 221 143 7 111 325 862 1080 3.10e-22 102
Msa0301640 MtrunA17_Chr3g0104621 25.128 390 243 13 125 490 763 1127 9.99e-24 107
Msa0301640 MtrunA17_Chr3g0104621 24.543 383 235 12 120 465 50 415 1.54e-15 80.9
Msa0301640 MtrunA17_Chr3g0138261 29.225 284 163 6 120 367 160 441 1.31e-23 106
Msa0301640 MtrunA17_Chr3g0138261 25.416 421 272 14 111 511 853 1251 3.11e-23 105
Msa0301640 MtrunA17_Chr4g0003971 33.032 221 140 6 111 325 808 1026 1.65e-23 106
Msa0301640 MtrunA17_Chr4g0003971 27.778 288 169 8 116 367 152 436 4.58e-23 105
Msa0301640 MtrunA17_Chr1g0171351 27.586 290 172 6 114 367 164 451 2.04e-23 105
Msa0301640 MtrunA17_Chr1g0171351 30.942 223 148 5 117 335 885 1105 1.40e-22 103
Msa0301640 MtrunA17_Chr7g0262261 29.200 250 164 8 111 349 786 1033 2.18e-23 105
Msa0301640 MtrunA17_Chr7g0262261 27.431 288 173 6 115 367 122 408 1.04e-22 103
Msa0301640 MtrunA17_Chr1g0148841 32.751 229 140 7 125 343 876 1100 2.36e-23 105
Msa0301640 MtrunA17_Chr1g0148841 23.414 457 284 11 126 537 166 601 7.70e-18 88.2
Msa0301640 MtrunA17_Chr7g0261981 26.502 283 172 5 120 367 156 437 3.51e-23 105
Msa0301640 MtrunA17_Chr7g0261981 29.151 271 180 9 65 325 794 1062 2.81e-21 99.4
Msa0301640 MtrunA17_Chr7g0265981 30.736 231 152 6 111 335 866 1094 1.65e-22 103
Msa0301640 MtrunA17_Chr7g0265981 26.148 283 173 4 120 367 178 459 3.03e-20 95.9
Msa0301640 MtrunA17_Chr1g0198291 32.381 210 136 5 125 330 893 1100 3.40e-22 102
Msa0301640 MtrunA17_Chr4g0062871 31.163 215 142 5 125 335 843 1055 1.34e-21 100
Msa0301640 MtrunA17_Chr4g0062871 27.273 286 169 7 119 367 142 425 9.01e-18 88.2
Msa0301640 MtrunA17_Chr1g0148811 34.300 207 126 7 125 325 853 1055 9.76e-21 97.4
Msa0301640 MtrunA17_Chr4g0065231 28.814 236 162 4 119 349 68 302 1.27e-20 96.3
Msa0301640 MtrunA17_Chr7g0265971 31.797 217 140 6 111 321 858 1072 1.82e-20 96.7
Msa0301640 MtrunA17_Chr7g0265971 26.148 283 173 4 120 367 172 453 6.56e-20 94.7
Msa0301640 MtrunA17_Chr4g0069211 27.152 302 186 10 32 319 760 1041 6.34e-20 94.7
Msa0301640 MtrunA17_Chr7g0265961 26.619 278 168 6 125 367 181 457 3.42e-19 92.4
Msa0301640 MtrunA17_Chr7g0265961 30.412 194 129 5 125 314 830 1021 1.65e-16 84.0
Msa0301640 MtrunA17_Chr1g0202431 24.818 411 273 11 124 528 48 428 4.29e-19 91.3
Msa0301640 MtrunA17_Chr6g0472481 30.000 210 139 6 116 319 1 208 8.97e-19 86.7
Msa0301640 MtrunA17_Chr7g0266001 26.056 284 172 6 120 367 57 338 9.42e-19 90.5
Msa0301640 MtrunA17_Chr3g0093331 30.435 207 138 4 148 349 20 225 3.32e-18 85.1
Msa0301640 MtrunA17_Chr7g0262321 27.948 229 152 7 111 331 551 774 4.28e-18 89.0
Msa0301640 MtrunA17_Chr7g0262321 31.496 127 85 2 242 367 35 160 1.30e-11 68.2
Msa0301640 MtrunA17_Chr4g0047831 40.260 77 46 0 248 324 8 84 6.50e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0301640 AT2G28070.2 83.462 520 79 3 1 513 1 520 0.0 878
Msa0301640 AT2G28070.2 58.824 119 47 1 511 627 609 727 3.37e-38 151
Msa0301640 AT2G28070.1 83.462 520 79 3 1 513 1 520 0.0 878
Msa0301640 AT2G28070.1 58.824 119 47 1 511 627 609 727 3.37e-38 151
Msa0301640 AT1G17840.1 42.308 416 231 6 105 513 48 461 1.26e-99 320
Msa0301640 AT1G17840.1 33.333 123 63 3 490 594 512 633 4.32e-12 69.7
Msa0301640 AT3G21090.1 39.716 423 237 7 104 513 22 439 3.56e-92 300
Msa0301640 AT1G51500.1 38.616 448 254 8 78 513 2 440 2.33e-89 292
Msa0301640 AT1G51460.1 36.364 440 252 9 93 513 4 434 2.66e-75 254
Msa0301640 AT1G51460.1 35.862 145 83 4 473 609 480 622 3.55e-16 82.8
Msa0301640 AT1G31770.1 36.145 249 152 5 118 362 72 317 4.05e-38 150
Msa0301640 AT1G71960.1 35.766 274 162 6 101 362 50 321 1.20e-37 149
Msa0301640 AT3G25620.1 32.595 316 184 9 69 362 28 336 1.23e-37 146
Msa0301640 AT2G01320.7 33.835 266 169 5 106 365 69 333 3.35e-37 145
Msa0301640 AT2G01320.6 33.835 266 169 5 106 365 69 333 3.35e-37 145
Msa0301640 AT2G37010.2 33.077 260 160 7 106 358 483 735 5.21e-37 148
Msa0301640 AT2G37010.1 33.077 260 160 7 106 358 483 735 5.21e-37 148
Msa0301640 AT5G06530.3 34.559 272 162 6 107 368 157 422 5.70e-37 147
Msa0301640 AT5G06530.2 34.559 272 162 6 107 368 157 422 9.13e-37 147
Msa0301640 AT5G06530.1 34.559 272 162 6 107 368 157 422 9.13e-37 147
Msa0301640 AT3G25620.2 30.579 363 208 12 69 403 28 374 1.21e-36 146
Msa0301640 AT2G01320.1 33.835 266 169 5 106 365 69 333 1.61e-36 146
Msa0301640 AT2G01320.4 33.835 266 169 5 106 365 69 333 1.61e-36 146
Msa0301640 AT2G01320.2 33.835 266 169 5 106 365 69 333 1.81e-36 146
Msa0301640 AT2G01320.3 33.835 266 169 5 106 365 69 333 1.87e-36 146
Msa0301640 AT2G01320.8 33.835 266 169 5 106 365 69 333 1.90e-36 145
Msa0301640 AT2G01320.5 33.835 266 169 5 106 365 69 333 1.90e-36 145
Msa0301640 AT4G27420.1 33.466 251 161 5 117 362 57 306 1.60e-35 142
Msa0301640 AT5G06530.4 37.339 233 133 5 143 368 1 227 8.49e-35 138
Msa0301640 AT2G37360.1 25.981 535 354 14 19 519 8 534 4.59e-33 135
Msa0301640 AT1G53390.1 32.707 266 165 7 100 358 500 758 1.06e-32 135
Msa0301640 AT3G13220.1 30.088 339 196 10 126 455 106 412 2.59e-32 133
Msa0301640 AT3G53510.1 28.607 402 260 10 131 519 131 518 6.09e-32 132
Msa0301640 AT3G55130.1 29.487 312 196 7 88 379 54 361 1.63e-31 130
Msa0301640 AT3G55110.1 34.322 236 148 4 131 361 96 329 2.42e-31 130
Msa0301640 AT5G60740.1 34.470 264 163 7 100 358 492 750 2.54e-31 131
Msa0301640 AT2G39350.1 27.830 424 275 10 120 519 103 519 4.15e-31 129
Msa0301640 AT3G55090.1 27.818 417 276 10 123 519 104 515 3.32e-29 124
Msa0301640 AT2G13610.1 26.966 445 294 11 99 526 34 464 5.98e-29 122
Msa0301640 AT2G29940.1 24.952 521 313 17 92 572 804 1286 9.40e-29 123
Msa0301640 AT2G29940.1 25.641 390 236 12 120 471 169 542 4.44e-22 102
Msa0301640 AT3G55100.1 30.375 293 176 8 107 376 22 309 1.23e-28 122
Msa0301640 AT3G55100.2 30.375 293 176 8 107 376 22 309 1.23e-28 122
Msa0301640 AT2G37280.4 30.091 329 189 13 32 342 600 905 4.95e-27 117
Msa0301640 AT2G37280.4 25.874 286 172 5 139 389 9 289 1.15e-20 97.8
Msa0301640 AT2G37280.2 30.091 329 189 13 32 342 758 1063 5.27e-27 117
Msa0301640 AT2G37280.2 26.000 300 182 5 125 389 153 447 3.13e-23 105
Msa0301640 AT2G37280.1 30.091 329 189 13 32 342 758 1063 5.54e-27 117
Msa0301640 AT2G37280.1 26.000 300 182 5 125 389 153 447 2.85e-23 105
Msa0301640 AT2G37280.3 30.091 329 189 13 32 342 787 1092 6.61e-27 117
Msa0301640 AT2G37280.3 23.708 329 182 6 125 389 153 476 1.51e-18 90.9
Msa0301640 AT5G13580.1 32.500 280 162 6 107 361 68 345 3.40e-26 114
Msa0301640 AT3G16340.1 32.159 227 148 5 117 339 832 1056 1.60e-25 113
Msa0301640 AT3G16340.1 23.764 526 322 18 126 607 162 652 2.05e-23 106
Msa0301640 AT3G16340.2 32.159 227 148 5 117 339 827 1051 1.67e-25 113
Msa0301640 AT3G16340.2 23.574 526 318 19 126 607 162 647 2.15e-21 100
Msa0301640 AT4G15230.2 32.283 254 155 7 88 330 786 1033 1.70e-25 113
Msa0301640 AT4G15230.3 32.283 254 155 7 88 330 786 1033 1.90e-25 112
Msa0301640 AT4G15230.1 32.283 254 155 7 88 330 786 1033 1.90e-25 112
Msa0301640 AT4G15230.4 32.283 254 155 7 88 330 707 954 2.15e-25 112
Msa0301640 AT4G15215.1 32.283 254 155 7 88 330 776 1023 2.16e-25 112
Msa0301640 AT4G15215.1 26.875 320 179 10 115 391 134 441 6.13e-20 95.5
Msa0301640 AT4G15215.11 32.283 254 155 7 88 330 783 1030 2.20e-25 112
Msa0301640 AT4G15215.11 26.562 320 187 9 115 391 134 448 1.41e-20 97.4
Msa0301640 AT4G15215.9 32.283 254 155 7 88 330 780 1027 2.26e-25 112
Msa0301640 AT4G15215.9 26.250 320 188 9 115 391 131 445 1.31e-20 97.4
Msa0301640 AT4G15215.4 32.283 254 155 7 88 330 780 1027 2.26e-25 112
Msa0301640 AT4G15215.4 26.250 320 188 9 115 391 131 445 1.31e-20 97.4
Msa0301640 AT4G15215.5 32.283 254 155 7 88 330 780 1027 2.26e-25 112
Msa0301640 AT4G15215.5 26.250 320 188 9 115 391 131 445 1.31e-20 97.4
Msa0301640 AT4G15215.3 32.283 254 155 7 88 330 780 1027 2.26e-25 112
Msa0301640 AT4G15215.3 26.250 320 188 9 115 391 131 445 1.31e-20 97.4
Msa0301640 AT4G15215.2 32.283 254 155 7 88 330 780 1027 2.26e-25 112
Msa0301640 AT4G15215.2 26.250 320 188 9 115 391 131 445 1.31e-20 97.4
Msa0301640 AT4G15215.8 32.283 254 155 7 88 330 773 1020 2.48e-25 112
Msa0301640 AT4G15215.8 26.562 320 180 10 115 391 131 438 7.47e-20 95.1
Msa0301640 AT4G15215.10 32.283 254 155 7 88 330 773 1020 2.48e-25 112
Msa0301640 AT4G15215.10 26.562 320 180 10 115 391 131 438 7.47e-20 95.1
Msa0301640 AT4G15215.6 32.283 254 155 7 88 330 773 1020 2.48e-25 112
Msa0301640 AT4G15215.6 26.562 320 180 10 115 391 131 438 7.47e-20 95.1
Msa0301640 AT4G15215.7 32.283 254 155 7 88 330 773 1020 2.48e-25 112
Msa0301640 AT4G15215.7 26.562 320 180 10 115 391 131 438 7.47e-20 95.1
Msa0301640 AT1G53270.1 34.632 231 146 4 121 348 45 273 3.54e-25 110
Msa0301640 AT4G15236.1 31.034 232 148 6 106 330 797 1023 6.56e-25 111
Msa0301640 AT1G66950.1 24.891 458 289 11 119 537 184 625 6.69e-25 111
Msa0301640 AT1G66950.1 29.474 285 187 9 61 335 811 1091 7.66e-23 104
Msa0301640 AT1G15210.1 27.243 301 179 7 114 379 172 467 1.42e-24 110
Msa0301640 AT1G15210.1 25.000 416 257 15 117 508 858 1242 2.83e-23 105
Msa0301640 AT3G30842.1 34.742 213 133 5 117 325 839 1049 1.79e-24 109
Msa0301640 AT3G30842.1 26.740 273 163 5 120 356 155 426 1.05e-19 94.7
Msa0301640 AT1G59870.1 26.434 401 237 13 125 497 893 1263 2.92e-24 109
Msa0301640 AT4G15233.1 29.412 238 144 5 106 330 799 1025 7.14e-24 107
Msa0301640 AT4G15233.2 29.412 238 144 5 106 330 799 1025 7.37e-24 107
Msa0301640 AT4G15233.8 29.412 238 144 5 106 330 790 1016 7.51e-24 107
Msa0301640 AT4G15233.7 29.412 238 144 5 106 330 781 1007 8.17e-24 107
Msa0301640 AT4G15233.7 23.214 448 292 13 126 540 155 583 6.00e-20 95.5
Msa0301640 AT4G15233.3 29.412 238 144 5 106 330 737 963 8.26e-24 107
Msa0301640 AT4G15233.6 29.412 238 144 5 106 330 737 963 8.26e-24 107
Msa0301640 AT3G53480.1 29.927 274 174 8 78 339 823 1090 1.95e-23 106
Msa0301640 AT3G53480.1 24.776 335 209 10 91 388 153 481 1.91e-22 103
Msa0301640 AT2G26910.1 29.545 264 173 8 83 335 795 1056 2.44e-23 106
Msa0301640 AT2G26910.1 25.773 291 178 6 113 367 137 425 5.95e-16 82.8
Msa0301640 AT2G36380.1 29.577 284 186 9 62 335 811 1090 3.12e-23 105
Msa0301640 AT2G36380.1 23.974 463 286 13 120 537 182 623 3.57e-22 102
Msa0301640 AT1G15520.2 33.981 206 126 6 126 325 852 1053 1.06e-22 104
Msa0301640 AT1G15520.2 26.280 293 176 6 113 368 156 445 1.20e-22 103
Msa0301640 AT4G15233.5 31.731 208 118 5 136 330 686 882 1.32e-22 103
Msa0301640 AT4G15233.5 23.214 448 292 13 126 540 93 521 1.37e-19 94.4
Msa0301640 AT4G15233.4 31.731 208 118 5 136 330 686 882 1.32e-22 103
Msa0301640 AT4G15233.4 23.214 448 292 13 126 540 93 521 1.37e-19 94.4
Msa0301640 AT1G15520.1 33.981 206 126 6 126 325 852 1053 1.56e-22 103
Msa0301640 AT1G15520.1 26.280 293 176 6 113 368 156 445 1.71e-22 103
Msa0301640 AT4G25750.1 33.624 229 135 7 126 348 30 247 2.17e-21 99.0
Msa0301640 AT5G19410.2 23.415 410 273 8 126 526 75 452 1.58e-18 90.1
Msa0301640 AT5G19410.1 23.415 410 273 8 126 526 66 443 2.00e-18 89.7
Msa0301640 AT5G52860.1 31.441 229 139 7 126 348 44 260 1.48e-16 84.0

Find 143 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTACACTGACTGTAATTA+TGG 0.209351 2_3:+58082441 Msa0301640:CDS
AAAGTTTCAAGTGTAGTAAT+AGG 0.213126 2_3:+58086454 Msa0301640:CDS
TCAGCCTTGCTGCAACTTCC+TGG 0.277048 2_3:+58082954 Msa0301640:CDS
CTTTCATACATACTCTATTC+AGG 0.302532 2_3:+58085937 Msa0301640:CDS
AACAGCAGTGTCCATGTTTA+CGG 0.309062 2_3:-58083993 None:intergenic
GCACCCTGGCAATGCTTAGA+AGG 0.309749 2_3:-58084652 None:intergenic
GATTTGACTGTTACTATAAA+GGG 0.310446 2_3:+58082364 Msa0301640:CDS
AGATTTGACTGTTACTATAA+AGG 0.315192 2_3:+58082363 Msa0301640:CDS
GCTATACATGCAATGTCTTT+AGG 0.335036 2_3:+58083011 Msa0301640:CDS
CTGTTACTATAAAGGGAAAA+AGG 0.337838 2_3:+58082371 Msa0301640:CDS
GTCATTCCACGCAAAATTGC+TGG 0.338407 2_3:+58082322 Msa0301640:CDS
CAAGGGAATGGAAATATTAC+TGG 0.338845 2_3:+58084362 Msa0301640:CDS
GATCATGCAAATAAACTTAT+AGG 0.339592 2_3:+58083035 Msa0301640:CDS
TCAGAAGGACTTTGCATGAT+TGG 0.342737 2_3:-58083730 None:intergenic
GCATTCTCTGTATTCTGTTT+CGG 0.343224 2_3:+58084447 Msa0301640:CDS
ACCTGCAATGGCTCGTAATA+AGG 0.347277 2_3:-58082488 None:intergenic
ATTATGGGGCCGGCTAAATC+AGG 0.348225 2_3:+58082457 Msa0301640:CDS
TGATCTCTCTCAGGGGCTAT+TGG 0.355364 2_3:+58086224 Msa0301640:intron
AAGAGCTAGAAACCCGGATA+TGG 0.362853 2_3:-58086292 None:intergenic
CCGGTATATGCGGGGAAGGC+AGG 0.362880 2_3:-58082291 None:intergenic
ACCTTATTACGAGCCATTGC+AGG 0.375545 2_3:+58082487 Msa0301640:CDS
CCTTTCCAGTTGGGCAAGTA+AGG 0.379363 2_3:+58086268 Msa0301640:CDS
CAGAGTAGCACAGAAGTCTT+TGG 0.380988 2_3:+58083379 Msa0301640:CDS
AGTAACAGTCAAATCTTTCC+AGG 0.387170 2_3:-58082356 None:intergenic
GTTCCCTTCTAAGCATTGCC+AGG 0.388493 2_3:+58084648 Msa0301640:CDS
AAGTTTCAAGTGTAGTAATA+GGG 0.389774 2_3:+58086455 Msa0301640:CDS
AATGGAAATACGTTGTTCTT+CGG 0.391466 2_3:+58083430 Msa0301640:CDS
TTGCTGGAGCTTCTGTTGCC+TGG 0.396436 2_3:+58082338 Msa0301640:CDS
TTCCACTTCGAACTACTGTT+GGG 0.399873 2_3:-58086336 None:intergenic
GCGAAATCGCAAATGCCATA+TGG 0.400087 2_3:+58082665 Msa0301640:CDS
ATGGACCTTACTTGCCCAAC+TGG 0.401481 2_3:-58086273 None:intergenic
GATAGAGAAACCACTCTGAT+TGG 0.419850 2_3:+58082900 Msa0301640:CDS
AGAAACATTAGCTTGCTTGC+AGG 0.422458 2_3:+58083453 Msa0301640:CDS
GGTACACTGACTGTAATTAT+GGG 0.425573 2_3:+58082442 Msa0301640:CDS
GGGCAAGTAAGGTCCATATC+CGG 0.428566 2_3:+58086279 Msa0301640:CDS
AAGGTTATTAAGAGTTCAAC+CGG 0.430478 2_3:+58082406 Msa0301640:CDS
TTACAGCACTTCTCAAATGC+TGG 0.430658 2_3:+58083697 Msa0301640:intron
GTATGTATGAAAGGCTATAT+AGG 0.432440 2_3:-58085927 None:intergenic
TTTCCACTTCGAACTACTGT+TGG 0.444047 2_3:-58086337 None:intergenic
GAAGGCTTGTTAGTATTGCT+AGG 0.447763 2_3:+58083096 Msa0301640:CDS
ACAGCCAAAACTTGATCAAA+AGG 0.460388 2_3:-58086535 None:intergenic
CGTATCTGTCTGCTTTCAAA+TGG 0.460745 2_3:+58083412 Msa0301640:CDS
TGATCTGTGATTTGCACTGC+AGG 0.461775 2_3:+58081882 Msa0301640:five_prime_UTR
CCTGCCTTCCCCGCATATAC+CGG 0.466166 2_3:+58082291 Msa0301640:CDS
AGCTAGTAGTCCTGCGAGTA+GGG 0.467264 2_3:+58082084 Msa0301640:CDS
CATCCTTCAGCTAGGATGTA+TGG 0.470230 2_3:+58082623 Msa0301640:CDS
TAGGCAACCGATCTCATTTG+AGG 0.471953 2_3:+58082150 Msa0301640:CDS
CACCTGTCCAAGTGATAAAG+AGG 0.474718 2_3:-58083158 None:intergenic
TTCAATTAGCATGCATCAAG+TGG 0.475589 2_3:+58081949 Msa0301640:five_prime_UTR
TTCTGTGCTACTCTGGTAGA+TGG 0.476789 2_3:-58083371 None:intergenic
TGTACCAGGTAATGCATAAC+CGG 0.479368 2_3:-58082425 None:intergenic
AGAATTCGAAGTACTTTGCC+AGG 0.479972 2_3:+58085881 Msa0301640:CDS
TTGAGGAGACTTGCAAGTAC+TGG 0.483563 2_3:+58083331 Msa0301640:CDS
CGCACTTATGAAAGAAATCA+AGG 0.483747 2_3:+58084676 Msa0301640:CDS
AGACGAACCTCTTTATCACT+TGG 0.486274 2_3:+58083151 Msa0301640:CDS
AACCTCTTTATCACTTGGAC+AGG 0.489582 2_3:+58083156 Msa0301640:CDS
TACAACAGATACAAGTTGAT+AGG 0.490049 2_3:+58086479 Msa0301640:exon
TATTAGTTGTGTCAAGGGAA+TGG 0.490070 2_3:+58084350 Msa0301640:CDS
TAGGCACCTCCTTTCCAGTT+GGG 0.490080 2_3:+58086259 Msa0301640:CDS
ATGGTGAAGTGTTTGTGAAC+GGG 0.491831 2_3:+58082642 Msa0301640:CDS
CGGTATATGCGGGGAAGGCA+GGG 0.492824 2_3:-58082290 None:intergenic
CTAGGCACCTCCTTTCCAGT+TGG 0.493307 2_3:+58086258 Msa0301640:CDS
CTGCACCATCCGGTATATGC+GGG 0.495369 2_3:-58082300 None:intergenic
GTGGTCATGATGCTGTCAGC+TGG 0.505140 2_3:+58085851 Msa0301640:CDS
GGAAAGCTAGCAATGCTACT+CGG 0.506105 2_3:+58084302 Msa0301640:CDS
GGATACATCCACACTGGTCC+TGG 0.509120 2_3:-58085899 None:intergenic
GTAGATTTCCCTGATTTAGC+CGG 0.511156 2_3:-58082466 None:intergenic
ATCTTTATTAGTTGTGTCAA+GGG 0.513800 2_3:+58084345 Msa0301640:CDS
CAGCTAGTAGTCCTGCGAGT+AGG 0.514125 2_3:+58082083 Msa0301640:CDS
TTGATTTCTTTCATAAGTGC+GGG 0.515517 2_3:-58084674 None:intergenic
CGTGGAATGACTGCACCATC+CGG 0.519891 2_3:-58082310 None:intergenic
GGCAAGTAAGGTCCATATCC+GGG 0.523860 2_3:+58086280 Msa0301640:CDS
GATCTTTATTAGTTGTGTCA+AGG 0.526647 2_3:+58084344 Msa0301640:CDS
ATAATTACAGTCAGTGTACC+AGG 0.528347 2_3:-58082439 None:intergenic
GCGGCTATAAGATACCTTCT+CGG 0.528833 2_3:-58084092 None:intergenic
CTGAATAGAGTATGTATGAA+AGG 0.532827 2_3:-58085936 None:intergenic
GAACTCACGTATGATCCATA+TGG 0.534450 2_3:-58082680 None:intergenic
AAGGCTTGTTAGTATTGCTA+GGG 0.534963 2_3:+58083097 Msa0301640:CDS
CAAAGACTTCTGTGCTACTC+TGG 0.536829 2_3:-58083378 None:intergenic
TTCCCTTCTAAGCATTGCCA+GGG 0.538765 2_3:+58084649 Msa0301640:CDS
CTTGATTTCTTTCATAAGTG+CGG 0.538870 2_3:-58084675 None:intergenic
TCCACTTCGAACTACTGTTG+GGG 0.540340 2_3:-58086335 None:intergenic
GAAAGCTAGCAATGCTACTC+GGG 0.542339 2_3:+58084303 Msa0301640:CDS
TTTGAGAGTGAGGGTGAAGC+CGG 0.543720 2_3:-58082253 None:intergenic
ATTTGAGGATTCACCTGAGT+GGG 0.547502 2_3:+58082165 Msa0301640:CDS
GTCCAGCTCTGAAAAGCAAA+GGG 0.551166 2_3:+58084281 Msa0301640:CDS
TTTCATAAGTGCGGGCACCC+TGG 0.554642 2_3:-58084666 None:intergenic
ATGCTCCTCACACTGTGCAT+TGG 0.554761 2_3:+58084403 Msa0301640:CDS
GCTATTGAGCTTTGAGAGTG+AGG 0.556454 2_3:-58082263 None:intergenic
ATACAGAGAATGCCCTAGAC+CGG 0.557108 2_3:-58084437 None:intergenic
ACTGACTGTAATTATGGGGC+CGG 0.558228 2_3:+58082447 Msa0301640:CDS
ATCGGTTGCCTAAGTGAACC+AGG 0.561181 2_3:-58082139 None:intergenic
CCATCCGGTATATGCGGGGA+AGG 0.561946 2_3:-58082295 None:intergenic
GACTTCCTAGTGGCGAGAGA+AGG 0.563856 2_3:+58083078 Msa0301640:CDS
TTATCTTTAGACTAATGAAG+AGG 0.567343 2_3:+58086580 Msa0301640:three_prime_UTR
GGTGGACATTGTTATATGAA+AGG 0.570411 2_3:+58083056 Msa0301640:CDS
ACAAGCCTTCTCTCGCCACT+AGG 0.571224 2_3:-58083083 None:intergenic
CCTTCCCCGCATATACCGGA+TGG 0.578040 2_3:+58082295 Msa0301640:CDS
CCTTACTTGCCCAACTGGAA+AGG 0.578671 2_3:-58086268 None:intergenic
CACCCTGGCAATGCTTAGAA+GGG 0.583140 2_3:-58084651 None:intergenic
CCACTTCGAACTACTGTTGG+GGG 0.583865 2_3:-58086334 None:intergenic
GGTCCAGCTCTGAAAAGCAA+AGG 0.584333 2_3:+58084280 Msa0301640:CDS
TAGAGAGTGAAATGTTCTGT+AGG 0.585747 2_3:+58081912 Msa0301640:five_prime_UTR
CAACTGGAAAGGAGGTGCCT+AGG 0.588278 2_3:-58086257 None:intergenic
CATTTGAAAGCAGACAGATA+CGG 0.592121 2_3:-58083411 None:intergenic
CTATTGAGCTTTGAGAGTGA+GGG 0.595592 2_3:-58082262 None:intergenic
CAGAAACTCGCGAACAGTGA+GGG 0.595981 2_3:-58082925 None:intergenic
GATCTGTGATTTGCACTGCA+GGG 0.597123 2_3:+58081883 Msa0301640:five_prime_UTR
TGAAAGGCTATATAGGACAT+TGG 0.597771 2_3:-58085920 None:intergenic
GCGCGTAGAAAATGATCAGA+AGG 0.599622 2_3:-58083745 None:intergenic
TCAACCGGTTATGCATTACC+TGG 0.600451 2_3:+58082421 Msa0301640:CDS
GAAGATTGCATCCTTCAGCT+AGG 0.607210 2_3:+58082615 Msa0301640:CDS
ACTGCACCATCCGGTATATG+CGG 0.608195 2_3:-58082301 None:intergenic
GGTGAATCCTCAAATGAGAT+CGG 0.609674 2_3:-58082157 None:intergenic
TACTTGCCCAACTGGAAAGG+AGG 0.612069 2_3:-58086265 None:intergenic
ATTGATGTTAGAGCTGATGA+AGG 0.613187 2_3:+58082202 Msa0301640:CDS
CATGCAAATAAACTTATAGG+TGG 0.613540 2_3:+58083038 Msa0301640:CDS
GATTCTGAAACTCACCGAGA+AGG 0.614809 2_3:+58084078 Msa0301640:CDS
TATTAATGCTGCAACAACAC+CGG 0.617203 2_3:+58082234 Msa0301640:CDS
GTACACTGACTGTAATTATG+GGG 0.622258 2_3:+58082443 Msa0301640:CDS
TCACCATACATCCTAGCTGA+AGG 0.622418 2_3:-58082626 None:intergenic
CAGTACCAATGCACAGTGTG+AGG 0.623464 2_3:-58084408 None:intergenic
TGCGTAAACCTGGTTCACTT+AGG 0.623735 2_3:+58082131 Msa0301640:CDS
GGACTTTGCATGATTGGACA+AGG 0.626165 2_3:-58083724 None:intergenic
TATGGTGAAGTGTTTGTGAA+CGG 0.627903 2_3:+58082641 Msa0301640:CDS
TCATCCTAATAGGATGACAA+TGG 0.631220 2_3:+58083959 Msa0301640:intron
TTATGGGGCCGGCTAAATCA+GGG 0.637031 2_3:+58082458 Msa0301640:CDS
GATGTTAGAGCTGATGAAGG+AGG 0.643758 2_3:+58082205 Msa0301640:CDS
GAAACCAGGAAGTTGCAGCA+AGG 0.649974 2_3:-58082958 None:intergenic
TGGTGAAGTGTTTGTGAACG+GGG 0.655717 2_3:+58082643 Msa0301640:CDS
GACATTGGATACATCCACAC+TGG 0.662440 2_3:-58085905 None:intergenic
TCAGTAGTATCATCCCACTC+AGG 0.663393 2_3:-58082178 None:intergenic
CTTGACGGTACCCTACTCGC+AGG 0.665873 2_3:-58082094 None:intergenic
TGCACCATCCGGTATATGCG+GGG 0.670806 2_3:-58082299 None:intergenic
CATTTGAGGATTCACCTGAG+TGG 0.683711 2_3:+58082164 Msa0301640:CDS
GTGTTCTTAGAGACCTGCAA+TGG 0.683718 2_3:-58082500 None:intergenic
TCACTCTCAAAGCTCAATAG+CGG 0.697029 2_3:+58082265 Msa0301640:CDS
CTATTGGAGAATGAGTACCT+AGG 0.704602 2_3:+58086240 Msa0301640:CDS
TCGTCTAGAAATAAAATACG+TGG 0.706573 2_3:-58083134 None:intergenic
TATATGAAAGGACTTCCTAG+TGG 0.713329 2_3:+58083068 Msa0301640:CDS
GTACTTTGCCAGGACCAGTG+TGG 0.715583 2_3:+58085891 Msa0301640:CDS
ACAGAAACTCGCGAACAGTG+AGG 0.722500 2_3:-58082926 None:intergenic
AGTGAGGGATCCAATCAGAG+TGG 0.743534 2_3:-58082910 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAGATAAATAACATAA+AGG - chr2_3:58083276-58083295 None:intergenic 10.0%
!!! ACTTTATTTTATTTTTGTTA+TGG + chr2_3:58085142-58085161 Msa0301640:intron 10.0%
!!! ATTTTATTATTTTTATTCGT+AGG + chr2_3:58086411-58086430 Msa0301640:CDS 10.0%
!!! TTTTATTATTTTTATTCGTA+GGG + chr2_3:58086412-58086431 Msa0301640:CDS 10.0%
!! AATAAAAAACAATGGAAAAA+GGG - chr2_3:58081850-58081869 None:intergenic 15.0%
!! AAATAAAAAACAATGGAAAA+AGG - chr2_3:58081851-58081870 None:intergenic 15.0%
!!! ATAAATTTTGATGATTTAAG+TGG + chr2_3:58081996-58082015 Msa0301640:five_prime_UTR 15.0%
!! CAAAATTAAACTCTTATAAA+TGG - chr2_3:58085648-58085667 None:intergenic 15.0%
!!! TTAGATGAAATTTTGTTACT+TGG + chr2_3:58081811-58081830 Msa0301640:five_prime_UTR 20.0%
!! AGATATTCACATTTGTATTT+AGG + chr2_3:58082555-58082574 Msa0301640:intron 20.0%
!! TTTATGAATACAATAGTATG+AGG + chr2_3:58083548-58083567 Msa0301640:intron 20.0%
!! TTATGAATACAATAGTATGA+GGG + chr2_3:58083549-58083568 Msa0301640:intron 20.0%
!!! ATTAATGTTTTCATCCTAAT+AGG + chr2_3:58083949-58083968 Msa0301640:intron 20.0%
!!! TAAAACATTATTGATTTTCC+AGG + chr2_3:58084255-58084274 Msa0301640:intron 20.0%
!! TTTAAAAATACGTGTCAAAT+GGG - chr2_3:58084789-58084808 None:intergenic 20.0%
!!! TTTTAAAAATACGTGTCAAA+TGG - chr2_3:58084790-58084809 None:intergenic 20.0%
!!! GTCATTTTTTTCTTTCATAT+AGG - chr2_3:58085124-58085143 None:intergenic 20.0%
!! GACATATGTCTATTAATATA+AGG - chr2_3:58085250-58085269 None:intergenic 20.0%
!!! AGACATATGTCTTATTTTAA+AGG + chr2_3:58085259-58085278 Msa0301640:intron 20.0%
!!! TATGTCTTATTTTAAAGGTT+AGG + chr2_3:58085264-58085283 Msa0301640:intron 20.0%
! AGATTTGACTGTTACTATAA+AGG + chr2_3:58082363-58082382 Msa0301640:CDS 25.0%
! GATTTGACTGTTACTATAAA+GGG + chr2_3:58082364-58082383 Msa0301640:CDS 25.0%
! AAAAAGGAAATACTCTGATA+AGG + chr2_3:58082387-58082406 Msa0301640:CDS 25.0%
! CAGATATTAAACAATCAATG+AGG - chr2_3:58082710-58082729 None:intergenic 25.0%
! CGACTATAAACATAACATAA+TGG - chr2_3:58082738-58082757 None:intergenic 25.0%
! CAATAAACAATATGAAAGCA+TGG - chr2_3:58082798-58082817 None:intergenic 25.0%
!!! ATATTTGTTTCTTAACTTGC+AGG + chr2_3:58082869-58082888 Msa0301640:intron 25.0%
!!! TATTTGTTTCTTAACTTGCA+GGG + chr2_3:58082870-58082889 Msa0301640:intron 25.0%
! GATCATGCAAATAAACTTAT+AGG + chr2_3:58083035-58083054 Msa0301640:CDS 25.0%
!!! AACGAAAATTGCTCTAAAAA+AGG - chr2_3:58083248-58083267 None:intergenic 25.0%
!!! TCTATTTTATTGAAGTGTCT+CGG + chr2_3:58083288-58083307 Msa0301640:intron 25.0%
!!! TTTTAGTTAAAAACGACTGT+TGG + chr2_3:58083580-58083599 Msa0301640:intron 25.0%
!!! CAATTAATACAGATTTTGAC+AGG + chr2_3:58083767-58083786 Msa0301640:CDS 25.0%
! TAATTGCTATGTGTAAAAAC+TGG + chr2_3:58083791-58083810 Msa0301640:CDS 25.0%
! ATGTAATATGGTATTTGTGA+AGG - chr2_3:58084173-58084192 None:intergenic 25.0%
! ATCTTTATTAGTTGTGTCAA+GGG + chr2_3:58084345-58084364 Msa0301640:CDS 25.0%
! ACTTTATTGCATGCATAATA+AGG - chr2_3:58084753-58084772 None:intergenic 25.0%
! TAGTATGTAGTACTAATAAC+TGG + chr2_3:58084812-58084831 Msa0301640:intron 25.0%
!! GTACTAATAACTGGAAATTT+TGG + chr2_3:58084821-58084840 Msa0301640:intron 25.0%
! ATGCGCGAATATATTATTTA+GGG + chr2_3:58084983-58085002 Msa0301640:intron 25.0%
! TCAAATAAGTCAATCTAAAC+AGG - chr2_3:58085009-58085028 None:intergenic 25.0%
!! GACTTGATAGCTTATAAAAT+AGG + chr2_3:58085091-58085110 Msa0301640:intron 25.0%
! ACAATTCAATTAAGTGCTTA+TGG - chr2_3:58085213-58085232 None:intergenic 25.0%
! TATTAATATAAGGCCATGTT+GGG - chr2_3:58085240-58085259 None:intergenic 25.0%
!! GTGATTACAATAAAGCTTTT+AGG + chr2_3:58085785-58085804 Msa0301640:intron 25.0%
!! AAAGTTTCAAGTGTAGTAAT+AGG + chr2_3:58086454-58086473 Msa0301640:CDS 25.0%
!! AAGTTTCAAGTGTAGTAATA+GGG + chr2_3:58086455-58086474 Msa0301640:CDS 25.0%
!! AATTCCTTTTGATCAAGTTT+TGG + chr2_3:58086531-58086550 Msa0301640:three_prime_UTR 25.0%
! TTATCTTTAGACTAATGAAG+AGG + chr2_3:58086580-58086599 Msa0301640:three_prime_UTR 25.0%
GGAAAAAGGGACAATATTTA+AGG - chr2_3:58081837-58081856 None:intergenic 30.0%
AGATAGAAAAAGTTGCTTGA+CGG - chr2_3:58082112-58082131 None:intergenic 30.0%
CTGTTACTATAAAGGGAAAA+AGG + chr2_3:58082371-58082390 Msa0301640:CDS 30.0%
AAGGTTATTAAGAGTTCAAC+CGG + chr2_3:58082406-58082425 Msa0301640:CDS 30.0%
! TTTTTCTGACAAAAGAAACC+AGG - chr2_3:58082975-58082994 None:intergenic 30.0%
CATGCAAATAAACTTATAGG+TGG + chr2_3:58083038-58083057 Msa0301640:CDS 30.0%
TCGTCTAGAAATAAAATACG+TGG - chr2_3:58083137-58083156 None:intergenic 30.0%
!!! TTTTGATGATGGTTACATTG+AGG + chr2_3:58083314-58083333 Msa0301640:CDS 30.0%
AATGGAAATACGTTGTTCTT+CGG + chr2_3:58083430-58083449 Msa0301640:CDS 30.0%
CATCCAAAATCAAATCTATG+CGG - chr2_3:58083508-58083527 None:intergenic 30.0%
! AGATTTTTCTTCCGTAAACA+TGG + chr2_3:58083982-58084001 Msa0301640:CDS 30.0%
! AGAAGTTCTAACTTGTATAG+CGG - chr2_3:58084114-58084133 None:intergenic 30.0%
AGTTAGAACTTCTGTTAATG+TGG + chr2_3:58084121-58084140 Msa0301640:intron 30.0%
TAATATGGTATTTGTGAAGG+AGG - chr2_3:58084170-58084189 None:intergenic 30.0%
TTCATGGGAAACATGTAATA+TGG - chr2_3:58084185-58084204 None:intergenic 30.0%
CATAAAAGATAGCTCTTCAT+GGG - chr2_3:58084200-58084219 None:intergenic 30.0%
ACATAAAAGATAGCTCTTCA+TGG - chr2_3:58084201-58084220 None:intergenic 30.0%
! TGAAGAGCTATCTTTTATGT+TGG + chr2_3:58084201-58084220 Msa0301640:intron 30.0%
!!! ACATTATTGATTTTCCAGGA+AGG + chr2_3:58084259-58084278 Msa0301640:intron 30.0%
GATCTTTATTAGTTGTGTCA+AGG + chr2_3:58084344-58084363 Msa0301640:CDS 30.0%
ACAAGCATATCTACAATTGT+TGG - chr2_3:58084545-58084564 None:intergenic 30.0%
! TTTATCATGCTTTAAACTGC+AGG + chr2_3:58084589-58084608 Msa0301640:intron 30.0%
TTGATTTCTTTCATAAGTGC+GGG - chr2_3:58084677-58084696 None:intergenic 30.0%
CTTGATTTCTTTCATAAGTG+CGG - chr2_3:58084678-58084697 None:intergenic 30.0%
!!! ATCTTTGTCACTTTTGTTCT+TGG - chr2_3:58084951-58084970 None:intergenic 30.0%
CATGCGCGAATATATTATTT+AGG + chr2_3:58084982-58085001 Msa0301640:intron 30.0%
TTGAATTGTTTATCCCAACA+TGG + chr2_3:58085224-58085243 Msa0301640:intron 30.0%
CTATTAATATAAGGCCATGT+TGG - chr2_3:58085241-58085260 None:intergenic 30.0%
TCAATATTTCACAGCTTACA+GGG - chr2_3:58085310-58085329 None:intergenic 30.0%
ATCAATATTTCACAGCTTAC+AGG - chr2_3:58085311-58085330 None:intergenic 30.0%
ATGGAGATGAGAAAAAGAAA+CGG - chr2_3:58085436-58085455 None:intergenic 30.0%
ATGACTCTATTACTGAATGA+AGG + chr2_3:58085538-58085557 Msa0301640:intron 30.0%
TGTAAAGTCACATATATCAG+TGG - chr2_3:58085710-58085729 None:intergenic 30.0%
TAATCACGTGCAATGAAATA+TGG - chr2_3:58085772-58085791 None:intergenic 30.0%
GTATGTATGAAAGGCTATAT+AGG - chr2_3:58085930-58085949 None:intergenic 30.0%
CTGAATAGAGTATGTATGAA+AGG - chr2_3:58085939-58085958 None:intergenic 30.0%
CTTTCATACATACTCTATTC+AGG + chr2_3:58085937-58085956 Msa0301640:CDS 30.0%
GACATCGTTGTGAAATAAAT+CGG + chr2_3:58086074-58086093 Msa0301640:intron 30.0%
CAGTGATTATACCTATTGTT+TGG + chr2_3:58086125-58086144 Msa0301640:intron 30.0%
! CTGAGTGAATAATTTGCAAA+TGG + chr2_3:58086154-58086173 Msa0301640:intron 30.0%
!!! TCTGTTGGTTTTGTTTCTTA+TGG + chr2_3:58086362-58086381 Msa0301640:CDS 30.0%
! ACACTTGAAACTTTTAAGCA+GGG - chr2_3:58086448-58086467 None:intergenic 30.0%
! TACACTTGAAACTTTTAAGC+AGG - chr2_3:58086449-58086468 None:intergenic 30.0%
!! TACAACAGATACAAGTTGAT+AGG + chr2_3:58086479-58086498 Msa0301640:exon 30.0%
TAGAGAGTGAAATGTTCTGT+AGG + chr2_3:58081912-58081931 Msa0301640:five_prime_UTR 35.0%
TTCAATTAGCATGCATCAAG+TGG + chr2_3:58081949-58081968 Msa0301640:five_prime_UTR 35.0%
GTGGAAAAAGTTGAAGATCA+TGG + chr2_3:58082015-58082034 Msa0301640:exon 35.0%
! TTTTTCTATCTGCGTAAACC+TGG + chr2_3:58082121-58082140 Msa0301640:CDS 35.0%
ATTGATGTTAGAGCTGATGA+AGG + chr2_3:58082202-58082221 Msa0301640:CDS 35.0%
TATTAATGCTGCAACAACAC+CGG + chr2_3:58082234-58082253 Msa0301640:CDS 35.0%
AGTAACAGTCAAATCTTTCC+AGG - chr2_3:58082359-58082378 None:intergenic 35.0%
ATAATTACAGTCAGTGTACC+AGG - chr2_3:58082442-58082461 None:intergenic 35.0%
! TGGTACACTGACTGTAATTA+TGG + chr2_3:58082441-58082460 Msa0301640:CDS 35.0%
! GGTACACTGACTGTAATTAT+GGG + chr2_3:58082442-58082461 Msa0301640:CDS 35.0%
! GTACACTGACTGTAATTATG+GGG + chr2_3:58082443-58082462 Msa0301640:CDS 35.0%
TTGAACTTTCTCTTTACCTC+AGG + chr2_3:58082593-58082612 Msa0301640:intron 35.0%
! TATGGTGAAGTGTTTGTGAA+CGG + chr2_3:58082641-58082660 Msa0301640:CDS 35.0%
TAAGCAGATTAAGTTCGATG+AGG - chr2_3:58082765-58082784 None:intergenic 35.0%
! CTTTTGTCAGAAAAAGAGTG+TGG + chr2_3:58082980-58082999 Msa0301640:CDS 35.0%
GCTATACATGCAATGTCTTT+AGG + chr2_3:58083011-58083030 Msa0301640:CDS 35.0%
GGTGGACATTGTTATATGAA+AGG + chr2_3:58083056-58083075 Msa0301640:CDS 35.0%
TATATGAAAGGACTTCCTAG+TGG + chr2_3:58083068-58083087 Msa0301640:CDS 35.0%
!! AAGGCTTGTTAGTATTGCTA+GGG + chr2_3:58083097-58083116 Msa0301640:CDS 35.0%
CATTTGAAAGCAGACAGATA+CGG - chr2_3:58083414-58083433 None:intergenic 35.0%
!! CTTCCGCATAGATTTGATTT+TGG + chr2_3:58083502-58083521 Msa0301640:intron 35.0%
AAACCAACTCTGCTAGTAAA+TGG + chr2_3:58083634-58083653 Msa0301640:intron 35.0%
AATCCATTTACTAGCAGAGT+TGG - chr2_3:58083640-58083659 None:intergenic 35.0%
AACTCTGCTAGTAAATGGAT+TGG + chr2_3:58083639-58083658 Msa0301640:intron 35.0%
TCATCCTAATAGGATGACAA+TGG + chr2_3:58083959-58083978 Msa0301640:intron 35.0%
ATCTCCATTGTCATCCTATT+AGG - chr2_3:58083966-58083985 None:intergenic 35.0%
TATTAGTTGTGTCAAGGGAA+TGG + chr2_3:58084350-58084369 Msa0301640:CDS 35.0%
CAAGGGAATGGAAATATTAC+TGG + chr2_3:58084362-58084381 Msa0301640:CDS 35.0%
!! TGCATTGGTACTGTATTTTC+CGG + chr2_3:58084418-58084437 Msa0301640:CDS 35.0%
GCATTCTCTGTATTCTGTTT+CGG + chr2_3:58084447-58084466 Msa0301640:CDS 35.0%
CGCACTTATGAAAGAAATCA+AGG + chr2_3:58084676-58084695 Msa0301640:CDS 35.0%
CATGCATAATAAGGACATGA+AGG - chr2_3:58084744-58084763 None:intergenic 35.0%
!! ATATGCCTTGACATTGACTT+AGG + chr2_3:58084862-58084881 Msa0301640:intron 35.0%
TAACACCTAAGTCAATGTCA+AGG - chr2_3:58084870-58084889 None:intergenic 35.0%
ACTTAGGTGTTAGTATGTGT+TGG + chr2_3:58084878-58084897 Msa0301640:intron 35.0%
ATACAAATGTGCTTGAATGC+TGG - chr2_3:58085384-58085403 None:intergenic 35.0%
GAAGACTAGACTTGATGTAA+TGG - chr2_3:58085455-58085474 None:intergenic 35.0%
TAGTCTTCTACTTCCTAGTA+GGG + chr2_3:58085467-58085486 Msa0301640:intron 35.0%
TGAAAGGCTATATAGGACAT+TGG - chr2_3:58085923-58085942 None:intergenic 35.0%
AATAGGTATAATCACTGCAG+TGG - chr2_3:58086122-58086141 None:intergenic 35.0%
!! CTCAGTTTTGTCCAAACAAT+AGG - chr2_3:58086139-58086158 None:intergenic 35.0%
!!! TACTTGTTTTGATCTCTCTC+AGG + chr2_3:58086215-58086234 Msa0301640:intron 35.0%
!!! ACTTGTTTTGATCTCTCTCA+GGG + chr2_3:58086216-58086235 Msa0301640:intron 35.0%
!! ATTTTGAAGAGCTAGAAACC+CGG - chr2_3:58086301-58086320 None:intergenic 35.0%
TTCGAAGTGGAAAAATCTGT+TGG + chr2_3:58086347-58086366 Msa0301640:CDS 35.0%
!!! GTTTTGTTTCTTATGGCGAT+AGG + chr2_3:58086369-58086388 Msa0301640:CDS 35.0%
ACAGCCAAAACTTGATCAAA+AGG - chr2_3:58086538-58086557 None:intergenic 35.0%
GGTGAATCCTCAAATGAGAT+CGG - chr2_3:58082160-58082179 None:intergenic 40.0%
ATTTGAGGATTCACCTGAGT+GGG + chr2_3:58082165-58082184 Msa0301640:CDS 40.0%
!! CTATTGAGCTTTGAGAGTGA+GGG - chr2_3:58082265-58082284 None:intergenic 40.0%
TCACTCTCAAAGCTCAATAG+CGG + chr2_3:58082265-58082284 Msa0301640:CDS 40.0%
TGTACCAGGTAATGCATAAC+CGG - chr2_3:58082428-58082447 None:intergenic 40.0%
GTAGATTTCCCTGATTTAGC+CGG - chr2_3:58082469-58082488 None:intergenic 40.0%
! ATGGTGAAGTGTTTGTGAAC+GGG + chr2_3:58082642-58082661 Msa0301640:CDS 40.0%
GAACTCACGTATGATCCATA+TGG - chr2_3:58082683-58082702 None:intergenic 40.0%
CAGATTAAGTTCGATGAGGT+TGG - chr2_3:58082761-58082780 None:intergenic 40.0%
GATAGAGAAACCACTCTGAT+TGG + chr2_3:58082900-58082919 Msa0301640:CDS 40.0%
! TCAGAAAAAGAGTGTGGTTG+AGG + chr2_3:58082986-58083005 Msa0301640:CDS 40.0%
!! GAAGGCTTGTTAGTATTGCT+AGG + chr2_3:58083096-58083115 Msa0301640:CDS 40.0%
AGACGAACCTCTTTATCACT+TGG + chr2_3:58083151-58083170 Msa0301640:CDS 40.0%
AACCTCTTTATCACTTGGAC+AGG + chr2_3:58083156-58083175 Msa0301640:CDS 40.0%
CGTATCTGTCTGCTTTCAAA+TGG + chr2_3:58083412-58083431 Msa0301640:CDS 40.0%
!! AGAAACATTAGCTTGCTTGC+AGG + chr2_3:58083453-58083472 Msa0301640:CDS 40.0%
ATCTATGCGGAAGAGAAAGA+AGG - chr2_3:58083495-58083514 None:intergenic 40.0%
! GAGTTGGTTTAGCGGAAAAA+AGG - chr2_3:58083624-58083643 None:intergenic 40.0%
! TACTAGCAGAGTTGGTTTAG+CGG - chr2_3:58083632-58083651 None:intergenic 40.0%
TTACAGCACTTCTCAAATGC+TGG + chr2_3:58083697-58083716 Msa0301640:intron 40.0%
TCAGAAGGACTTTGCATGAT+TGG - chr2_3:58083733-58083752 None:intergenic 40.0%
TGCTATGTGTAAAAACTGGC+AGG + chr2_3:58083795-58083814 Msa0301640:CDS 40.0%
AACAGCAGTGTCCATGTTTA+CGG - chr2_3:58083996-58084015 None:intergenic 40.0%
! GTACTGTATTTTCCGGTCTA+GGG + chr2_3:58084425-58084444 Msa0301640:CDS 40.0%
GAGAAAAAGAAACGGAATGC+TGG - chr2_3:58085428-58085447 None:intergenic 40.0%
! CTAGTCTTCTACTTCCTAGT+AGG + chr2_3:58085466-58085485 Msa0301640:intron 40.0%
!! TGCTAGTTGTTGCTACTTTG+TGG + chr2_3:58085566-58085585 Msa0301640:intron 40.0%
! CTTTGTGGCAAGATGTTTTC+TGG + chr2_3:58085581-58085600 Msa0301640:intron 40.0%
TATGTGTGAGTACTTCGTTC+AGG - chr2_3:58085816-58085835 None:intergenic 40.0%
ACACATATGTACGCCATTTC+AGG + chr2_3:58085829-58085848 Msa0301640:intron 40.0%
! AGAATTCGAAGTACTTTGCC+AGG + chr2_3:58085881-58085900 Msa0301640:CDS 40.0%
!!! CTTGTTTTGATCTCTCTCAG+GGG + chr2_3:58086217-58086236 Msa0301640:intron 40.0%
CTATTGGAGAATGAGTACCT+AGG + chr2_3:58086240-58086259 Msa0301640:CDS 40.0%
TTCCACTTCGAACTACTGTT+GGG - chr2_3:58086339-58086358 None:intergenic 40.0%
TTTCCACTTCGAACTACTGT+TGG - chr2_3:58086340-58086359 None:intergenic 40.0%
! TGATCTGTGATTTGCACTGC+AGG + chr2_3:58081882-58081901 Msa0301640:five_prime_UTR 45.0%
! GATCTGTGATTTGCACTGCA+GGG + chr2_3:58081883-58081902 Msa0301640:five_prime_UTR 45.0%
TGCGTAAACCTGGTTCACTT+AGG + chr2_3:58082131-58082150 Msa0301640:CDS 45.0%
TAGGCAACCGATCTCATTTG+AGG + chr2_3:58082150-58082169 Msa0301640:CDS 45.0%
CATTTGAGGATTCACCTGAG+TGG + chr2_3:58082164-58082183 Msa0301640:CDS 45.0%
TCAGTAGTATCATCCCACTC+AGG - chr2_3:58082181-58082200 None:intergenic 45.0%
GATGTTAGAGCTGATGAAGG+AGG + chr2_3:58082205-58082224 Msa0301640:CDS 45.0%
!! GCTATTGAGCTTTGAGAGTG+AGG - chr2_3:58082266-58082285 None:intergenic 45.0%
GTCATTCCACGCAAAATTGC+TGG + chr2_3:58082322-58082341 Msa0301640:CDS 45.0%
TCAACCGGTTATGCATTACC+TGG + chr2_3:58082421-58082440 Msa0301640:CDS 45.0%
ACTGACTGTAATTATGGGGC+CGG + chr2_3:58082447-58082466 Msa0301640:CDS 45.0%
ACCTTATTACGAGCCATTGC+AGG + chr2_3:58082487-58082506 Msa0301640:CDS 45.0%
ACCTGCAATGGCTCGTAATA+AGG - chr2_3:58082491-58082510 None:intergenic 45.0%
GTGTTCTTAGAGACCTGCAA+TGG - chr2_3:58082503-58082522 None:intergenic 45.0%
TGAAGGATGCAATCTTCCTG+AGG - chr2_3:58082612-58082631 None:intergenic 45.0%
GAAGATTGCATCCTTCAGCT+AGG + chr2_3:58082615-58082634 Msa0301640:CDS 45.0%
CATCCTTCAGCTAGGATGTA+TGG + chr2_3:58082623-58082642 Msa0301640:CDS 45.0%
TCACCATACATCCTAGCTGA+AGG - chr2_3:58082629-58082648 None:intergenic 45.0%
! TGGTGAAGTGTTTGTGAACG+GGG + chr2_3:58082643-58082662 Msa0301640:CDS 45.0%
GCGAAATCGCAAATGCCATA+TGG + chr2_3:58082665-58082684 Msa0301640:CDS 45.0%
CACCTGTCCAAGTGATAAAG+AGG - chr2_3:58083161-58083180 None:intergenic 45.0%
! TGTCTCGGCACTTTTGATGA+TGG + chr2_3:58083303-58083322 Msa0301640:CDS 45.0%
TTGAGGAGACTTGCAAGTAC+TGG + chr2_3:58083331-58083350 Msa0301640:CDS 45.0%
! TTCTGTGCTACTCTGGTAGA+TGG - chr2_3:58083374-58083393 None:intergenic 45.0%
! CAAAGACTTCTGTGCTACTC+TGG - chr2_3:58083381-58083400 None:intergenic 45.0%
CAGAGTAGCACAGAAGTCTT+TGG + chr2_3:58083379-58083398 Msa0301640:CDS 45.0%
GGACTTTGCATGATTGGACA+AGG - chr2_3:58083727-58083746 None:intergenic 45.0%
GCGCGTAGAAAATGATCAGA+AGG - chr2_3:58083748-58083767 None:intergenic 45.0%
!! GATTCTGAAACTCACCGAGA+AGG + chr2_3:58084078-58084097 Msa0301640:CDS 45.0%
GCGGCTATAAGATACCTTCT+CGG - chr2_3:58084095-58084114 None:intergenic 45.0%
TTTGTGAAGGAGGAGACTAG+TGG - chr2_3:58084160-58084179 None:intergenic 45.0%
!! GTCCAGCTCTGAAAAGCAAA+GGG + chr2_3:58084281-58084300 Msa0301640:CDS 45.0%
!! TTCCCTTTGCTTTTCAGAGC+TGG - chr2_3:58084286-58084305 None:intergenic 45.0%
GGAAAGCTAGCAATGCTACT+CGG + chr2_3:58084302-58084321 Msa0301640:CDS 45.0%
GAAAGCTAGCAATGCTACTC+GGG + chr2_3:58084303-58084322 Msa0301640:CDS 45.0%
! GGTACTGTATTTTCCGGTCT+AGG + chr2_3:58084424-58084443 Msa0301640:CDS 45.0%
ATACAGAGAATGCCCTAGAC+CGG - chr2_3:58084440-58084459 None:intergenic 45.0%
! TTCCCTTCTAAGCATTGCCA+GGG + chr2_3:58084649-58084668 Msa0301640:CDS 45.0%
CATATGTACGCCATTTCAGG+TGG + chr2_3:58085832-58085851 Msa0301640:intron 45.0%
AGCATCATGACCACCTGAAA+TGG - chr2_3:58085845-58085864 None:intergenic 45.0%
GACATTGGATACATCCACAC+TGG - chr2_3:58085908-58085927 None:intergenic 45.0%
AAGAGCTAGAAACCCGGATA+TGG - chr2_3:58086295-58086314 None:intergenic 45.0%
TCCACTTCGAACTACTGTTG+GGG - chr2_3:58086338-58086357 None:intergenic 45.0%
!! TAAAATAAAATAAAAAACAA+TGG - chr2_3:58081858-58081877 None:intergenic 5.0%
AGCTAGTAGTCCTGCGAGTA+GGG + chr2_3:58082084-58082103 Msa0301640:CDS 50.0%
ATCGGTTGCCTAAGTGAACC+AGG - chr2_3:58082142-58082161 None:intergenic 50.0%
TTTGAGAGTGAGGGTGAAGC+CGG - chr2_3:58082256-58082275 None:intergenic 50.0%
ACTGCACCATCCGGTATATG+CGG - chr2_3:58082304-58082323 None:intergenic 50.0%
! GAAGCTCCAGCAATTTTGCG+TGG - chr2_3:58082331-58082350 None:intergenic 50.0%
ATTATGGGGCCGGCTAAATC+AGG + chr2_3:58082457-58082476 Msa0301640:CDS 50.0%
TTATGGGGCCGGCTAAATCA+GGG + chr2_3:58082458-58082477 Msa0301640:CDS 50.0%
AGTGAGGGATCCAATCAGAG+TGG - chr2_3:58082913-58082932 None:intergenic 50.0%
CAGAAACTCGCGAACAGTGA+GGG - chr2_3:58082928-58082947 None:intergenic 50.0%
ACAGAAACTCGCGAACAGTG+AGG - chr2_3:58082929-58082948 None:intergenic 50.0%
GAAACCAGGAAGTTGCAGCA+AGG - chr2_3:58082961-58082980 None:intergenic 50.0%
! TTTTCAGAGCTGGACCTTCC+TGG - chr2_3:58084276-58084295 None:intergenic 50.0%
!! GGTCCAGCTCTGAAAAGCAA+AGG + chr2_3:58084280-58084299 Msa0301640:CDS 50.0%
!!! CTCGGGTAGCTGTTTTGACA+TGG + chr2_3:58084320-58084339 Msa0301640:CDS 50.0%
ATGCTCCTCACACTGTGCAT+TGG + chr2_3:58084403-58084422 Msa0301640:CDS 50.0%
CAGTACCAATGCACAGTGTG+AGG - chr2_3:58084411-58084430 None:intergenic 50.0%
! GTTCCCTTCTAAGCATTGCC+AGG + chr2_3:58084648-58084667 Msa0301640:CDS 50.0%
CACCCTGGCAATGCTTAGAA+GGG - chr2_3:58084654-58084673 None:intergenic 50.0%
! GTTGGTCTCTTTGCCATGCT+TGG + chr2_3:58084896-58084915 Msa0301640:intron 50.0%
CTTCTACTTCCTAGTAGGGC+TGG + chr2_3:58085471-58085490 Msa0301640:intron 50.0%
ACTGATCTTCCAGCCCTACT+AGG - chr2_3:58085483-58085502 None:intergenic 50.0%
TGATCTCTCTCAGGGGCTAT+TGG + chr2_3:58086224-58086243 Msa0301640:intron 50.0%
TAGGCACCTCCTTTCCAGTT+GGG + chr2_3:58086259-58086278 Msa0301640:CDS 50.0%
TACTTGCCCAACTGGAAAGG+AGG - chr2_3:58086268-58086287 None:intergenic 50.0%
CCTTACTTGCCCAACTGGAA+AGG - chr2_3:58086271-58086290 None:intergenic 50.0%
CCTTTCCAGTTGGGCAAGTA+AGG + chr2_3:58086268-58086287 Msa0301640:CDS 50.0%
ATGGACCTTACTTGCCCAAC+TGG - chr2_3:58086276-58086295 None:intergenic 50.0%
GGGCAAGTAAGGTCCATATC+CGG + chr2_3:58086279-58086298 Msa0301640:CDS 50.0%
GGCAAGTAAGGTCCATATCC+GGG + chr2_3:58086280-58086299 Msa0301640:CDS 50.0%
CCACTTCGAACTACTGTTGG+GGG - chr2_3:58086337-58086356 None:intergenic 50.0%
CAGCTAGTAGTCCTGCGAGT+AGG + chr2_3:58082083-58082102 Msa0301640:CDS 55.0%
TGCACCATCCGGTATATGCG+GGG - chr2_3:58082302-58082321 None:intergenic 55.0%
CTGCACCATCCGGTATATGC+GGG - chr2_3:58082303-58082322 None:intergenic 55.0%
CGTGGAATGACTGCACCATC+CGG - chr2_3:58082313-58082332 None:intergenic 55.0%
TTGCTGGAGCTTCTGTTGCC+TGG + chr2_3:58082338-58082357 Msa0301640:CDS 55.0%
TCAGCCTTGCTGCAACTTCC+TGG + chr2_3:58082954-58082973 Msa0301640:CDS 55.0%
GACTTCCTAGTGGCGAGAGA+AGG + chr2_3:58083078-58083097 Msa0301640:CDS 55.0%
ACAAGCCTTCTCTCGCCACT+AGG - chr2_3:58083086-58083105 None:intergenic 55.0%
GCACCCTGGCAATGCTTAGA+AGG - chr2_3:58084655-58084674 None:intergenic 55.0%
TTTCATAAGTGCGGGCACCC+TGG - chr2_3:58084669-58084688 None:intergenic 55.0%
AGTGCTTGCTTCGCCAAGCA+TGG - chr2_3:58084912-58084931 None:intergenic 55.0%
GTGGTCATGATGCTGTCAGC+TGG + chr2_3:58085851-58085870 Msa0301640:CDS 55.0%
GTACTTTGCCAGGACCAGTG+TGG + chr2_3:58085891-58085910 Msa0301640:CDS 55.0%
GGATACATCCACACTGGTCC+TGG - chr2_3:58085902-58085921 None:intergenic 55.0%
!! CAACTGGAAAGGAGGTGCCT+AGG - chr2_3:58086260-58086279 None:intergenic 55.0%
CTAGGCACCTCCTTTCCAGT+TGG + chr2_3:58086258-58086277 Msa0301640:CDS 55.0%
CCCCCAACAGTAGTTCGAAG+TGG + chr2_3:58086334-58086353 Msa0301640:CDS 55.0%
CTTGACGGTACCCTACTCGC+AGG - chr2_3:58082097-58082116 None:intergenic 60.0%
CGGTATATGCGGGGAAGGCA+GGG - chr2_3:58082293-58082312 None:intergenic 60.0%
CCTGCCTTCCCCGCATATAC+CGG + chr2_3:58082291-58082310 Msa0301640:CDS 60.0%
CCATCCGGTATATGCGGGGA+AGG - chr2_3:58082298-58082317 None:intergenic 60.0%
CCTTCCCCGCATATACCGGA+TGG + chr2_3:58082295-58082314 Msa0301640:CDS 60.0%
CCGGTATATGCGGGGAAGGC+AGG - chr2_3:58082294-58082313 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 58081668 58086627 58081668 ID=Msa0301640;Name=Msa0301640
chr2_3 mRNA 58081668 58086627 58081668 ID=Msa0301640-mRNA-1;Parent=Msa0301640;Name=Msa0301640-mRNA-1;_AED=0.14;_eAED=0.14;_QI=366|0.88|1|1|1|1|10|130|634
chr2_3 exon 58081668 58082508 58081668 ID=Msa0301640-mRNA-1:exon:18699;Parent=Msa0301640-mRNA-1
chr2_3 exon 58082615 58082694 58082615 ID=Msa0301640-mRNA-1:exon:18700;Parent=Msa0301640-mRNA-1
chr2_3 exon 58082891 58083177 58082891 ID=Msa0301640-mRNA-1:exon:18701;Parent=Msa0301640-mRNA-1
chr2_3 exon 58083303 58083474 58083303 ID=Msa0301640-mRNA-1:exon:18702;Parent=Msa0301640-mRNA-1
chr2_3 exon 58083703 58083816 58083703 ID=Msa0301640-mRNA-1:exon:18703;Parent=Msa0301640-mRNA-1
chr2_3 exon 58083971 58084099 58083971 ID=Msa0301640-mRNA-1:exon:18704;Parent=Msa0301640-mRNA-1
chr2_3 exon 58084277 58084468 58084277 ID=Msa0301640-mRNA-1:exon:18705;Parent=Msa0301640-mRNA-1
chr2_3 exon 58084611 58084697 58084611 ID=Msa0301640-mRNA-1:exon:18706;Parent=Msa0301640-mRNA-1
chr2_3 exon 58085851 58085958 58085851 ID=Msa0301640-mRNA-1:exon:18707;Parent=Msa0301640-mRNA-1
chr2_3 exon 58086237 58086627 58086237 ID=Msa0301640-mRNA-1:exon:18708;Parent=Msa0301640-mRNA-1
chr2_3 five_prime_UTR 58081668 58082033 58081668 ID=Msa0301640-mRNA-1:five_prime_utr;Parent=Msa0301640-mRNA-1
chr2_3 CDS 58082034 58082508 58082034 ID=Msa0301640-mRNA-1:cds;Parent=Msa0301640-mRNA-1
chr2_3 CDS 58082615 58082694 58082615 ID=Msa0301640-mRNA-1:cds;Parent=Msa0301640-mRNA-1
chr2_3 CDS 58082891 58083177 58082891 ID=Msa0301640-mRNA-1:cds;Parent=Msa0301640-mRNA-1
chr2_3 CDS 58083303 58083474 58083303 ID=Msa0301640-mRNA-1:cds;Parent=Msa0301640-mRNA-1
chr2_3 CDS 58083703 58083816 58083703 ID=Msa0301640-mRNA-1:cds;Parent=Msa0301640-mRNA-1
chr2_3 CDS 58083971 58084099 58083971 ID=Msa0301640-mRNA-1:cds;Parent=Msa0301640-mRNA-1
chr2_3 CDS 58084277 58084468 58084277 ID=Msa0301640-mRNA-1:cds;Parent=Msa0301640-mRNA-1
chr2_3 CDS 58084611 58084697 58084611 ID=Msa0301640-mRNA-1:cds;Parent=Msa0301640-mRNA-1
chr2_3 CDS 58085851 58085958 58085851 ID=Msa0301640-mRNA-1:cds;Parent=Msa0301640-mRNA-1
chr2_3 CDS 58086237 58086497 58086237 ID=Msa0301640-mRNA-1:cds;Parent=Msa0301640-mRNA-1
chr2_3 three_prime_UTR 58086498 58086627 58086498 ID=Msa0301640-mRNA-1:three_prime_utr;Parent=Msa0301640-mRNA-1
Gene Sequence

>Msa0301640

ATGGAAGAAATACAGTCTCAGTCAGATAATTACAGATCTTCATCATCGTCAGCTAGTAGTCCTGCGAGTAGGGTACCGTCAAGCAACTTTTTCTATCTGCGTAAACCTGGTTCACTTAGGCAACCGATCTCATTTGAGGATTCACCTGAGTGGGATGATACTACTGATATTGATGTTAGAGCTGATGAAGGAGGCGACTCTATTAATGCTGCAACAACACCGGCTTCACCCTCACTCTCAAAGCTCAATAGCGGTTCCCTGCCTTCCCCGCATATACCGGATGGTGCAGTCATTCCACGCAAAATTGCTGGAGCTTCTGTTGCCTGGAAAGATTTGACTGTTACTATAAAGGGAAAAAGGAAATACTCTGATAAGGTTATTAAGAGTTCAACCGGTTATGCATTACCTGGTACACTGACTGTAATTATGGGGCCGGCTAAATCAGGGAAATCTACCTTATTACGAGCCATTGCAGGAAGATTGCATCCTTCAGCTAGGATGTATGGTGAAGTGTTTGTGAACGGGGCGAAATCGCAAATGCCATATGGATCATACGGTTATGTAGATAGAGAAACCACTCTGATTGGATCCCTCACTGTTCGCGAGTTTCTGTATTATTCAGCCTTGCTGCAACTTCCTGGTTTCTTTTGTCAGAAAAAGAGTGTGGTTGAGGATGCTATACATGCAATGTCTTTAGGTGATCATGCAAATAAACTTATAGGTGGACATTGTTATATGAAAGGACTTCCTAGTGGCGAGAGAAGGCTTGTTAGTATTGCTAGGGAGCTTGTGATGAGACCACGTATTTTATTTCTAGACGAACCTCTTTATCACTTGGACAGTGTCTCGGCACTTTTGATGATGGTTACATTGAGGAGACTTGCAAGTACTGGTTGCACTCTTATCATAACCATCTACCAGAGTAGCACAGAAGTCTTTGGTCTTTTTGACCGTATCTGTCTGCTTTCAAATGGAAATACGTTGTTCTTCGGAGAAACATTAGCTTGCTTGCAGCACTTCTCAAATGCTGGATTTCCTTGTCCAATCATGCAAAGTCCTTCTGATCATTTTCTACGCGCAATTAATACAGATTTTGACAGGATAATTGCTATGTGTAAAAACTGGCAGGATGACAATGGAGATTTTTCTTCCGTAAACATGGACACTGCTGTTGCTATACGAACACTTGAAGCAACTTATAAGTCATCTGCAGATGCAGCTTCTGTTGAAACAATGATTCTGAAACTCACCGAGAAGGAAGGTCCAGCTCTGAAAAGCAAAGGGAAAGCTAGCAATGCTACTCGGGTAGCTGTTTTGACATGGAGATCTTTATTAGTTGTGTCAAGGGAATGGAAATATTACTGGCTGCATCTTGTTCTTTACATGCTCCTCACACTGTGCATTGGTACTGTATTTTCCGGTCTAGGGCATTCTCTGTATTCTGTTTCGGCAAGAGTTGCAGCAATTTTTGTATTTGTGTCATTCTGTTCCCTTCTAAGCATTGCCAGGGTGCCCGCACTTATGAAAGAAATCAAGGTGGTCATGATGCTGTCAGCTGGCTATTTTAGAATTCGAAGTACTTTGCCAGGACCAGTGTGGATGTATCCAATGTCCTATATAGCCTTTCATACATACTCTATTCAGGGGCTATTGGAGAATGAGTACCTAGGCACCTCCTTTCCAGTTGGGCAAGTAAGGTCCATATCCGGGTTTCTAGCTCTTCAAAATGTGTACAATATCTCCCCCAACAGTAGTTCGAAGTGGAAAAATCTGTTGGTTTTGTTTCTTATGGCGATAGGTTATCGAATTTTTGTGTTTATTTTATTATTTTTATTCGTAGGGAAAAAAATATCCCTGCTTAAAAGTTTCAAGTGTAGTAATAGGGATACAACAGATACAAGTTGA
Protein sequence

>Msa0301640

MEEIQSQSDNYRSSSSSASSPASRVPSSNFFYLRKPGSLRQPISFEDSPEWDDTTDIDVRADEGGDSINAATTPASPSLSKLNSGSLPSPHIPDGAVIPRKIAGASVAWKDLTVTIKGKRKYSDKVIKSSTGYALPGTLTVIMGPAKSGKSTLLRAIAGRLHPSARMYGEVFVNGAKSQMPYGSYGYVDRETTLIGSLTVREFLYYSALLQLPGFFCQKKSVVEDAIHAMSLGDHANKLIGGHCYMKGLPSGERRLVSIARELVMRPRILFLDEPLYHLDSVSALLMMVTLRRLASTGCTLIITIYQSSTEVFGLFDRICLLSNGNTLFFGETLACLQHFSNAGFPCPIMQSPSDHFLRAINTDFDRIIAMCKNWQDDNGDFSSVNMDTAVAIRTLEATYKSSADAASVETMILKLTEKEGPALKSKGKASNATRVAVLTWRSLLVVSREWKYYWLHLVLYMLLTLCIGTVFSGLGHSLYSVSARVAAIFVFVSFCSLLSIARVPALMKEIKVVMMLSAGYFRIRSTLPGPVWMYPMSYIAFHTYSIQGLLENEYLGTSFPVGQVRSISGFLALQNVYNISPNSSSKWKNLLVLFLMAIGYRIFVFILLFLFVGKKISLLKSFKCSNRDTTDTS*