Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188740 | XP_003592901.1 | 98.565 | 418 | 6 | 0 | 1 | 418 | 1 | 418 | 0.0 | 854 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188740 | sp|Q9FUM1|EF1G_PRUAV | 78.910 | 422 | 82 | 4 | 3 | 418 | 2 | 422 | 0.0 | 656 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188740 | Q1SL16 | 98.565 | 418 | 6 | 0 | 1 | 418 | 1 | 418 | 0.0 | 854 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0188740 | 0.820998 | 5.098718e-53 | -8.615850e-47 |
| Msa0016440 | Msa0188740 | 0.833205 | 6.095659e-56 | -8.615850e-47 |
| Msa0021290 | Msa0188740 | 0.823201 | 1.573244e-53 | -8.615850e-47 |
| Msa0021320 | Msa0188740 | 0.821700 | 3.512330e-53 | -8.615850e-47 |
| Msa0029730 | Msa0188740 | 0.808142 | 3.581588e-50 | -8.615850e-47 |
| Msa0040220 | Msa0188740 | 0.840598 | 7.895679e-58 | -8.615850e-47 |
| Msa0042510 | Msa0188740 | 0.825272 | 5.131914e-54 | -8.615850e-47 |
| Msa0050320 | Msa0188740 | -0.824038 | 1.002411e-53 | -8.615850e-47 |
| Msa0071640 | Msa0188740 | 0.858173 | 9.882639e-63 | -8.615850e-47 |
| Msa0071760 | Msa0188740 | 0.800369 | 1.488943e-48 | -8.615850e-47 |
| Msa0079560 | Msa0188740 | 0.828966 | 6.701304e-55 | -8.615850e-47 |
| Msa0086160 | Msa0188740 | 0.845802 | 3.235137e-59 | -8.615850e-47 |
| Msa0089540 | Msa0188740 | 0.856481 | 3.124748e-62 | -8.615850e-47 |
| Msa0094210 | Msa0188740 | 0.803236 | 3.837963e-49 | -8.615850e-47 |
| Msa0099090 | Msa0188740 | -0.819155 | 1.347557e-52 | -8.615850e-47 |
| Msa0116600 | Msa0188740 | 0.856057 | 4.161598e-62 | -8.615850e-47 |
| Msa0116690 | Msa0188740 | 0.854205 | 1.437352e-61 | -8.615850e-47 |
| Msa0121480 | Msa0188740 | -0.808479 | 3.034678e-50 | -8.615850e-47 |
| Msa0127230 | Msa0188740 | 0.825296 | 5.065463e-54 | -8.615850e-47 |
| Msa0132460 | Msa0188740 | 0.893722 | 4.823476e-75 | -8.615850e-47 |
| Msa0132890 | Msa0188740 | 0.803013 | 4.267920e-49 | -8.615850e-47 |
| Msa0134580 | Msa0188740 | 0.844962 | 5.461551e-59 | -8.615850e-47 |
| Msa0154720 | Msa0188740 | -0.823164 | 1.605294e-53 | -8.615850e-47 |
| Msa0167860 | Msa0188740 | 0.808042 | 3.760636e-50 | -8.615850e-47 |
| Msa0169710 | Msa0188740 | 0.810949 | 8.936328e-51 | -8.615850e-47 |
| Msa0172300 | Msa0188740 | 0.812251 | 4.656324e-51 | -8.615850e-47 |
| Msa0173250 | Msa0188740 | 0.806063 | 9.868979e-50 | -8.615850e-47 |
| Msa0182050 | Msa0188740 | 0.892136 | 2.095361e-74 | -8.615850e-47 |
| Msa0182100 | Msa0188740 | 0.894805 | 1.744971e-75 | -8.615850e-47 |
| Msa0183840 | Msa0188740 | 0.822491 | 2.302725e-53 | -8.615850e-47 |
| Msa0188740 | Msa0192050 | 0.831292 | 1.813224e-55 | -8.615850e-47 |
| Msa0188740 | Msa0192300 | 0.871464 | 6.702026e-67 | -8.615850e-47 |
| Msa0188740 | Msa0195030 | 0.860877 | 1.520625e-63 | -8.615850e-47 |
| Msa0188740 | Msa0219090 | 0.805993 | 1.020575e-49 | -8.615850e-47 |
| Msa0188740 | Msa0237180 | 0.872729 | 2.541776e-67 | -8.615850e-47 |
| Msa0188740 | Msa0239420 | 0.816677 | 4.888057e-52 | -8.615850e-47 |
| Msa0188740 | Msa0266380 | -0.803393 | 3.561207e-49 | -8.615850e-47 |
| Msa0188740 | Msa0270160 | 0.967510 | 2.237735e-127 | -8.615850e-47 |
| Msa0188740 | Msa0274940 | 0.854778 | 9.810089e-62 | -8.615850e-47 |
| Msa0188740 | Msa0277600 | 0.829414 | 5.216815e-55 | -8.615850e-47 |
| Msa0188740 | Msa0281330 | 0.809437 | 1.893469e-50 | -8.615850e-47 |
| Msa0188740 | Msa0281370 | 0.818511 | 1.886870e-52 | -8.615850e-47 |
| Msa0188740 | Msa0301250 | 0.869897 | 2.194153e-66 | -8.615850e-47 |
| Msa0188740 | Msa0301640 | 0.805162 | 1.524956e-49 | -8.615850e-47 |
| Msa0188740 | Msa0313060 | 0.874392 | 7.001545e-68 | -8.615850e-47 |
| Msa0188740 | Msa0315430 | 0.806585 | 7.658192e-50 | -8.615850e-47 |
| Msa0188740 | Msa0315660 | 0.872747 | 2.507493e-67 | -8.615850e-47 |
| Msa0188740 | Msa0340560 | 0.811601 | 6.453878e-51 | -8.615850e-47 |
| Msa0188740 | Msa0341860 | -0.810241 | 1.271472e-50 | -8.615850e-47 |
| Msa0188740 | Msa0370350 | -0.833279 | 5.841318e-56 | -8.615850e-47 |
| Msa0188740 | Msa0371490 | 0.893636 | 5.224818e-75 | -8.615850e-47 |
| Msa0188740 | Msa0372100 | 0.807620 | 4.623407e-50 | -8.615850e-47 |
| Msa0188740 | Msa0373350 | 0.800534 | 1.378051e-48 | -8.615850e-47 |
| Msa0188740 | Msa0373830 | 0.806777 | 6.977495e-50 | -8.615850e-47 |
| Msa0188740 | Msa0377370 | 0.833136 | 6.342600e-56 | -8.615850e-47 |
| Msa0188740 | Msa0377520 | 0.817331 | 3.485881e-52 | -8.615850e-47 |
| Msa0188740 | Msa0378620 | -0.821385 | 4.152730e-53 | -8.615850e-47 |
| Msa0188740 | Msa0380590 | 0.874907 | 4.678192e-68 | -8.615850e-47 |
| Msa0188740 | Msa0382670 | 0.851306 | 9.671154e-61 | -8.615850e-47 |
| Msa0188740 | Msa0385030 | 0.847359 | 1.215848e-59 | -8.615850e-47 |
| Msa0188740 | Msa0387290 | 0.848861 | 4.678029e-60 | -8.615850e-47 |
| Msa0188740 | Msa0388250 | 0.813102 | 3.034101e-51 | -8.615850e-47 |
| Msa0188740 | Msa0388520 | 0.863135 | 3.089941e-64 | -8.615850e-47 |
| Msa0188740 | Msa0416470 | 0.845175 | 4.784329e-59 | -8.615850e-47 |
| Msa0188740 | Msa0417850 | -0.827682 | 1.366819e-54 | -8.615850e-47 |
| Msa0188740 | Msa0426090 | 0.861252 | 1.169085e-63 | -8.615850e-47 |
| Msa0188740 | Msa0426250 | 0.854620 | 1.090572e-61 | -8.615850e-47 |
| Msa0188740 | Msa0426940 | 0.839720 | 1.338206e-57 | -8.615850e-47 |
| Msa0188740 | Msa0430130 | 0.841976 | 3.427127e-58 | -8.615850e-47 |
| Msa0188740 | Msa0432260 | -0.808741 | 2.667854e-50 | -8.615850e-47 |
| Msa0188740 | Msa0432750 | 0.813657 | 2.290800e-51 | -8.615850e-47 |
| Msa0188740 | Msa0433060 | 0.836475 | 9.158909e-57 | -8.615850e-47 |
| Msa0188740 | Msa0435280 | 0.805374 | 1.377072e-49 | -8.615850e-47 |
| Msa0188740 | Msa0450150 | 0.811851 | 5.693093e-51 | -8.615850e-47 |
| Msa0188740 | Msa0469430 | 0.802864 | 4.583395e-49 | -8.615850e-47 |
| Msa0188740 | Msa0472480 | 0.860851 | 1.547651e-63 | -8.615850e-47 |
| Msa0188740 | Msa0475810 | 0.823414 | 1.403061e-53 | -8.615850e-47 |
| Msa0188740 | Msa0476730 | -0.818272 | 2.137727e-52 | -8.615850e-47 |
| Msa0188740 | Msa0479480 | 0.833623 | 4.796436e-56 | -8.615850e-47 |
| Msa0188740 | Msa0479980 | 0.810183 | 1.308009e-50 | -8.615850e-47 |
| Msa0188740 | Msa0482760 | 0.807453 | 5.017797e-50 | -8.615850e-47 |
| Msa0188740 | Msa0500420 | 0.872622 | 2.760096e-67 | -8.615850e-47 |
| Msa0188740 | Msa0511760 | 0.836601 | 8.506904e-57 | -8.615850e-47 |
| Msa0188740 | Msa0515110 | 0.815539 | 8.779709e-52 | -8.615850e-47 |
| Msa0188740 | Msa0521100 | -0.800486 | 1.409350e-48 | -8.615850e-47 |
| Msa0188740 | Msa0521730 | 0.889145 | 3.147131e-73 | -8.615850e-47 |
| Msa0188740 | Msa0524680 | 0.834685 | 2.598151e-56 | -8.615850e-47 |
| Msa0188740 | Msa0547920 | 0.863129 | 3.103825e-64 | -8.615850e-47 |
| Msa0188740 | Msa0549550 | -0.810179 | 1.310950e-50 | -8.615850e-47 |
| Msa0188740 | Msa0573550 | 0.862464 | 4.976976e-64 | -8.615850e-47 |
| Msa0188740 | Msa0574780 | 0.822196 | 2.695677e-53 | -8.615850e-47 |
| Msa0188740 | Msa0578010 | 0.847285 | 1.274221e-59 | -8.615850e-47 |
| Msa0188740 | Msa0589160 | 0.803144 | 4.009615e-49 | -8.615850e-47 |
| Msa0188740 | Msa0597240 | 0.827966 | 1.168373e-54 | -8.615850e-47 |
| Msa0188740 | Msa0602900 | 0.869010 | 4.263774e-66 | -8.615850e-47 |
| Msa0188740 | Msa0604890 | -0.807811 | 4.211974e-50 | -8.615850e-47 |
| Msa0188740 | Msa0609120 | 0.826923 | 2.078196e-54 | -8.615850e-47 |
| Msa0188740 | Msa0619230 | 0.864685 | 1.017658e-64 | -8.615850e-47 |
| Msa0188740 | Msa0621190 | 0.861009 | 1.386214e-63 | -8.615850e-47 |
| Msa0188740 | Msa0623360 | -0.836665 | 8.193353e-57 | -8.615850e-47 |
| Msa0188740 | Msa0629280 | 0.810420 | 1.163052e-50 | -8.615850e-47 |
| Msa0188740 | Msa0643960 | 0.868333 | 7.061083e-66 | -8.615850e-47 |
| Msa0188740 | Msa0646180 | -0.812075 | 5.088472e-51 | -8.615850e-47 |
| Msa0188740 | Msa0656450 | 0.839065 | 1.979571e-57 | -8.615850e-47 |
| Msa0188740 | Msa0659020 | -0.809889 | 1.513867e-50 | -8.615850e-47 |
| Msa0188740 | Msa0691740 | -0.801154 | 1.029166e-48 | -8.615850e-47 |
| Msa0188740 | Msa0691760 | 0.808450 | 3.078181e-50 | -8.615850e-47 |
| Msa0188740 | Msa0694400 | 0.827224 | 1.760624e-54 | -8.615850e-47 |
| Msa0188740 | Msa0700370 | 0.813551 | 2.416934e-51 | -8.615850e-47 |
| Msa0188740 | Msa0708630 | 0.894743 | 1.849596e-75 | -8.615850e-47 |
| Msa0188740 | Msa0709380 | 0.819021 | 1.444982e-52 | -8.615850e-47 |
| Msa0188740 | Msa0718560 | 0.858901 | 5.993899e-63 | -8.615850e-47 |
| Msa0188740 | Msa0738420 | 0.822403 | 2.413930e-53 | -8.615850e-47 |
| Msa0188740 | Msa0748350 | 0.806838 | 6.771074e-50 | -8.615850e-47 |
| Msa0188740 | Msa0759660 | 0.812020 | 5.231002e-51 | -8.615850e-47 |
| Msa0188740 | Msa0784830 | 0.827982 | 1.157820e-54 | -8.615850e-47 |
| Msa0188740 | Msa0790450 | 0.979587 | 2.693701e-148 | -8.615850e-47 |
| Msa0188740 | Msa0798590 | 0.828007 | 1.141770e-54 | -8.615850e-47 |
| Msa0188740 | Msa0834220 | 0.808823 | 2.562476e-50 | -8.615850e-47 |
| Msa0188740 | Msa0846900 | 0.803477 | 3.421932e-49 | -8.615850e-47 |
| Msa0188740 | Msa0852620 | 0.803745 | 3.010377e-49 | -8.615850e-47 |
| Msa0188740 | Msa0857260 | 0.809580 | 1.763721e-50 | -8.615850e-47 |
| Msa0188740 | Msa0865790 | 0.805937 | 1.048971e-49 | -8.615850e-47 |
| Msa0188740 | Msa0880050 | 0.872838 | 2.338279e-67 | -8.615850e-47 |
| Msa0188740 | Msa0929680 | 0.802731 | 4.881691e-49 | -8.615850e-47 |
| Msa0188740 | Msa0929700 | 0.863762 | 1.974843e-64 | -8.615850e-47 |
| Msa0188740 | Msa0930100 | 0.863107 | 3.151495e-64 | -8.615850e-47 |
| Msa0188740 | Msa0930360 | 0.888679 | 4.766285e-73 | -8.615850e-47 |
| Msa0188740 | Msa0930790 | 0.848947 | 4.428786e-60 | -8.615850e-47 |
| Msa0188740 | Msa0930890 | 0.820773 | 5.745510e-53 | -8.615850e-47 |
| Msa0188740 | Msa0935930 | -0.803749 | 3.004161e-49 | -8.615850e-47 |
| Msa0188740 | Msa1001620 | 0.800142 | 1.655289e-48 | -8.615850e-47 |
| Msa0188740 | Msa1025200 | 0.895074 | 1.353414e-75 | -8.615850e-47 |
| Msa0188740 | Msa1025220 | 0.904221 | 1.539944e-79 | -8.615850e-47 |
| Msa0188740 | Msa1026710 | 0.855268 | 7.069176e-62 | -8.615850e-47 |
| Msa0188740 | Msa1037030 | 0.813413 | 2.592538e-51 | -8.615850e-47 |
| Msa0188740 | Msa1041830 | 0.835801 | 1.358214e-56 | -8.615850e-47 |
| Msa0188740 | Msa1047020 | 0.857989 | 1.120820e-62 | -8.615850e-47 |
| Msa0188740 | Msa1050100 | 0.813323 | 2.712540e-51 | -8.615850e-47 |
| Msa0188740 | Msa1068660 | 0.841313 | 5.124296e-58 | -8.615850e-47 |
| Msa0188740 | Msa1070810 | 0.823840 | 1.115417e-53 | -8.615850e-47 |
| Msa0188740 | Msa1076200 | 0.816789 | 4.613177e-52 | -8.615850e-47 |
| Msa0188740 | Msa1082050 | 0.865907 | 4.200396e-65 | -8.615850e-47 |
| Msa0188740 | Msa1085850 | 0.864957 | 8.362743e-65 | -8.615850e-47 |
| Msa0188740 | Msa1093190 | -0.805091 | 1.577860e-49 | -8.615850e-47 |
| Msa0188740 | Msa1116940 | 0.840129 | 1.047403e-57 | -8.615850e-47 |
| Msa0188740 | Msa1124980 | 0.873459 | 1.447105e-67 | -8.615850e-47 |
| Msa0188740 | Msa1126690 | 0.880930 | 3.658231e-70 | -8.615850e-47 |
| Msa0188740 | Msa1136880 | 0.848047 | 7.862676e-60 | -8.615850e-47 |
| Msa0188740 | Msa1136980 | 0.820317 | 7.311397e-53 | -8.615850e-47 |
| Msa0188740 | Msa1144610 | 0.815400 | 9.425597e-52 | -8.615850e-47 |
| Msa0188740 | Msa1144630 | 0.807753 | 4.333820e-50 | -8.615850e-47 |
| Msa0188740 | Msa1147600 | -0.801688 | 8.000194e-49 | -8.615850e-47 |
| Msa0188740 | Msa1156830 | 0.853059 | 3.068393e-61 | -8.615850e-47 |
| Msa0188740 | Msa1158630 | 0.827530 | 1.486956e-54 | -8.615850e-47 |
| Msa0188740 | Msa1163320 | 0.809809 | 1.574558e-50 | -8.615850e-47 |
| Msa0188740 | Msa1164520 | 0.811323 | 7.414190e-51 | -8.615850e-47 |
| Msa0188740 | Msa1167360 | 0.871811 | 5.140619e-67 | -8.615850e-47 |
| Msa0188740 | Msa1218610 | 0.828640 | 8.036783e-55 | -8.615850e-47 |
| Msa0188740 | Msa1219760 | 0.827983 | 1.157012e-54 | -8.615850e-47 |
| Msa0188740 | Msa1220580 | 0.805405 | 1.356257e-49 | -8.615850e-47 |
| Msa0188740 | Msa1235950 | 0.845301 | 4.423434e-59 | -8.615850e-47 |
| Msa0188740 | Msa1235980 | 0.847997 | 8.111875e-60 | -8.615850e-47 |
| Msa0188740 | Msa1237040 | 0.916694 | 1.309212e-85 | -8.615850e-47 |
| Msa0188740 | Msa1245270 | 0.822165 | 2.741390e-53 | -8.615850e-47 |
| Msa0188740 | Msa1255830 | 0.839254 | 1.768254e-57 | -8.615850e-47 |
| Msa0188740 | Msa1255850 | 0.843305 | 1.520511e-58 | -8.615850e-47 |
| Msa0188740 | Msa1263610 | -0.838833 | 2.273063e-57 | -8.615850e-47 |
| Msa0188740 | Msa1278130 | 0.843034 | 1.795803e-58 | -8.615850e-47 |
| Msa0188740 | Msa1284060 | 0.818774 | 1.644440e-52 | -8.615850e-47 |
| Msa0188740 | Msa1284800 | 0.857287 | 1.808731e-62 | -8.615850e-47 |
| Msa0188740 | Msa1296090 | 0.847357 | 1.217288e-59 | -8.615850e-47 |
| Msa0188740 | Msa1316100 | 0.815718 | 8.010222e-52 | -8.615850e-47 |
| Msa0188740 | Msa1317390 | 0.897908 | 8.900904e-77 | -8.615850e-47 |
| Msa0188740 | Msa1333350 | 0.821185 | 4.618713e-53 | -8.615850e-47 |
| Msa0188740 | Msa1333370 | 0.809770 | 1.605299e-50 | -8.615850e-47 |
| Msa0188740 | Msa1334560 | 0.818122 | 2.311343e-52 | -8.615850e-47 |
| Msa0188740 | Msa1341780 | 0.885888 | 5.511514e-72 | -8.615850e-47 |
| Msa0188740 | Msa1347610 | 0.869355 | 3.294194e-66 | -8.615850e-47 |
| Msa0188740 | Msa1351020 | 0.831502 | 1.609511e-55 | -8.615850e-47 |
| Msa0188740 | Msa1359880 | -0.808773 | 2.626570e-50 | -8.615850e-47 |
| Msa0188740 | Msa1363910 | 0.824966 | 6.061704e-54 | -8.615850e-47 |
| Msa0188740 | Msa1363930 | 0.806245 | 9.032868e-50 | -8.615850e-47 |
| Msa0188740 | Msa1367540 | 0.830850 | 2.328107e-55 | -8.615850e-47 |
| Msa0188740 | Msa1371410 | 0.813240 | 2.828959e-51 | -8.615850e-47 |
| Msa0188740 | Msa1385480 | 0.823769 | 1.158681e-53 | -8.615850e-47 |
| Msa0188740 | Msa1387750 | 0.864561 | 1.113305e-64 | -8.615850e-47 |
| Msa0188740 | Msa1390760 | 0.869450 | 3.069193e-66 | -8.615850e-47 |
| Msa0188740 | Msa1398310 | -0.804826 | 1.792984e-49 | -8.615850e-47 |
| Msa0188740 | Msa1403520 | 0.967570 | 1.846099e-127 | -8.615850e-47 |
| Msa0188740 | Msa1407550 | 0.834865 | 2.340676e-56 | -8.615850e-47 |
| Msa0188740 | Msa1413570 | 0.840492 | 8.415451e-58 | -8.615850e-47 |
| Msa0188740 | Msa1415620 | 0.817255 | 3.625071e-52 | -8.615850e-47 |
| Msa0188740 | Msa1423050 | 0.868904 | 4.614025e-66 | -8.615850e-47 |
| Msa0188740 | Msa1424570 | 0.850247 | 1.921301e-60 | -8.615850e-47 |
| Msa0188740 | Msa1432310 | 0.817723 | 2.844784e-52 | -8.615850e-47 |
| Msa0188740 | Msa1446510 | 0.839386 | 1.634096e-57 | -8.615850e-47 |
| Msa0188740 | Msa1449160 | 0.801459 | 8.914316e-49 | -8.615850e-47 |
| Msa0188740 | Msa1450560 | 0.979126 | 2.742914e-147 | -8.615850e-47 |
| Msa0188740 | Msa1463510 | 0.821933 | 3.102247e-53 | -8.615850e-47 |
| Msa0188740 | Msa1465700 | 0.848995 | 4.295270e-60 | -8.615850e-47 |
| Msa0188740 | Msa1465890 | 0.861135 | 1.269153e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188740 | MtrunA17_Chr2g0276951 | 98.565 | 418 | 6 | 0 | 1 | 418 | 1 | 418 | 0.0 | 854 |
| Msa0188740 | MtrunA17_Chr3g0102331 | 89.021 | 419 | 42 | 3 | 3 | 418 | 2 | 419 | 0.0 | 769 |
| Msa0188740 | MtrunA17_Chr0c12g0493651 | 83.055 | 419 | 67 | 3 | 3 | 418 | 2 | 419 | 0.0 | 678 |
| Msa0188740 | MtrunA17_Chr4g0077001 | 56.522 | 322 | 52 | 3 | 13 | 333 | 12 | 246 | 1.23e-114 | 335 |
| Msa0188740 | MtrunA17_Chr4g0077011 | 90.769 | 65 | 6 | 0 | 344 | 408 | 1 | 65 | 1.11e-38 | 135 |
| Msa0188740 | MtrunA17_Chr3g0109891 | 30.233 | 172 | 107 | 6 | 42 | 203 | 40 | 208 | 1.19e-13 | 69.7 |
| Msa0188740 | MtrunA17_Chr1g0157211 | 28.221 | 163 | 107 | 4 | 16 | 169 | 16 | 177 | 5.34e-12 | 65.1 |
| Msa0188740 | MtrunA17_Chr1g0195831 | 27.014 | 211 | 125 | 5 | 13 | 205 | 11 | 210 | 6.44e-12 | 64.7 |
| Msa0188740 | MtrunA17_Chr3g0095781 | 25.714 | 175 | 113 | 4 | 42 | 204 | 39 | 208 | 8.23e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188740 | AT1G09640.1 | 76.555 | 418 | 91 | 4 | 3 | 418 | 2 | 414 | 0.0 | 641 |
| Msa0188740 | AT1G57720.1 | 74.341 | 417 | 101 | 5 | 3 | 418 | 2 | 413 | 0.0 | 627 |
| Msa0188740 | AT1G57720.2 | 74.341 | 417 | 101 | 5 | 3 | 418 | 2 | 413 | 0.0 | 627 |
| Msa0188740 | AT1G09640.2 | 69.608 | 204 | 60 | 2 | 3 | 205 | 2 | 204 | 7.31e-97 | 291 |
| Msa0188740 | AT1G09640.2 | 88.732 | 71 | 7 | 1 | 349 | 418 | 195 | 265 | 1.02e-35 | 132 |
| Msa0188740 | AT2G30870.1 | 30.075 | 133 | 84 | 3 | 38 | 162 | 35 | 166 | 7.82e-13 | 67.8 |
| Msa0188740 | AT2G30860.1 | 29.371 | 143 | 94 | 2 | 27 | 162 | 24 | 166 | 1.71e-12 | 67.0 |
| Msa0188740 | AT3G62760.1 | 28.141 | 199 | 128 | 6 | 16 | 203 | 14 | 208 | 2.44e-12 | 66.6 |
| Msa0188740 | AT5G17220.1 | 28.655 | 171 | 113 | 3 | 42 | 204 | 40 | 209 | 1.30e-11 | 64.3 |
Find 134 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTAATATCTTGCGGAAAT+TGG | 0.099297 | 2_1:+3938983 | None:intergenic |
| CTTTGGTTCATCTTTGGTTT+TGG | 0.104573 | 2_1:+3938893 | None:intergenic |
| CATTCATCCATGATAAATTT+TGG | 0.113279 | 2_1:+3938274 | None:intergenic |
| GTGTTTGATTTGCAGGATTC+TGG | 0.117283 | 2_1:-3938510 | Msa0188740:intron |
| CACTTTCTTTGGTTCATCTT+TGG | 0.187717 | 2_1:+3938887 | None:intergenic |
| TCCTCCAAGTAAGATGATTT+TGG | 0.192577 | 2_1:-3938781 | Msa0188740:CDS |
| TGGATCAGAGCCTCCATTTA+AGG | 0.199866 | 2_1:-3938332 | Msa0188740:CDS |
| TTTGGAAAGATGCTTATAAT+TGG | 0.211636 | 2_1:-3938352 | Msa0188740:CDS |
| TCTGATTTAGCCACTTTCTT+TGG | 0.237195 | 2_1:+3938876 | None:intergenic |
| AGGATTCTTGGGTTTGGGCT+TGG | 0.251916 | 2_1:+3938815 | None:intergenic |
| ACAACATCCAACTTGTATAT+TGG | 0.252389 | 2_1:-3939086 | Msa0188740:CDS |
| CTCCTCTTCAACTTCTACTT+TGG | 0.254637 | 2_1:+3938842 | None:intergenic |
| GGATTCTTGGGTTTGGGCTT+GGG | 0.262060 | 2_1:+3938816 | None:intergenic |
| CCCAATTTCCGCAAGATATT+AGG | 0.262248 | 2_1:-3938984 | Msa0188740:CDS |
| CACAACCCCTTCACCTTAAA+TGG | 0.280661 | 2_1:+3938319 | None:intergenic |
| CTGGCTCGCAAGTATGCTTT+TGG | 0.282861 | 2_1:-3938370 | Msa0188740:CDS |
| ATTTGAGGGAGAGGCTCTTT+TGG | 0.299039 | 2_1:-3938158 | Msa0188740:CDS |
| CAAATTCTATATTTCTCTTT+CGG | 0.305227 | 2_1:-3937950 | Msa0188740:three_prime_UTR |
| TTTATCAACATGAACCCTAT+TGG | 0.305444 | 2_1:-3940586 | Msa0188740:CDS |
| TCCTCTTCAACTTCTACTTT+GGG | 0.315309 | 2_1:+3938843 | None:intergenic |
| TTTCTTTCAGGTCCCGGTCT+TGG | 0.315787 | 2_1:-3940487 | Msa0188740:intron |
| TCAAGAGGATTCTTGGGTTT+GGG | 0.320569 | 2_1:+3938810 | None:intergenic |
| GTCAAGAGGATTCTTGGGTT+TGG | 0.321823 | 2_1:+3938809 | None:intergenic |
| ACAATACCTACCTTTCCAAT+AGG | 0.324030 | 2_1:+3940571 | None:intergenic |
| AAGAAGGTCAAGAGGATTCT+TGG | 0.332287 | 2_1:+3938803 | None:intergenic |
| GTTGGAAGCCATGGCGGCCT+TGG | 0.336295 | 2_1:-3940822 | Msa0188740:intron |
| TTGGGTCACAACAATTTGTT+TGG | 0.342164 | 2_1:-3940316 | Msa0188740:CDS |
| TTTAAGTGAAAACTAGTTCC+AGG | 0.343366 | 2_1:-3938124 | Msa0188740:exon |
| TCATCACTATAGCAGAAAAT+AGG | 0.351177 | 2_1:+3938057 | None:intergenic |
| CTATATTTCTCTTTCGGCTT+AGG | 0.355049 | 2_1:-3937944 | Msa0188740:three_prime_UTR |
| TTGTGACCCTGAACAAGGTT+GGG | 0.356898 | 2_1:-3938414 | Msa0188740:CDS |
| CAGGTACAACTTCATGATAT+TGG | 0.358542 | 2_1:+3939740 | None:intergenic |
| CAATACCTACCTTTCCAATA+GGG | 0.369972 | 2_1:+3940572 | None:intergenic |
| CCTAATATCTTGCGGAAATT+GGG | 0.374931 | 2_1:+3938984 | None:intergenic |
| TGGATCATCTCTTATTGATC+AGG | 0.386602 | 2_1:-3940296 | Msa0188740:intron |
| CTTTCCTGCAGTTGCCCGAT+TGG | 0.389371 | 2_1:-3940335 | Msa0188740:intron |
| CTCATGTTGAGAGATACTTT+TGG | 0.389806 | 2_1:-3939022 | Msa0188740:CDS |
| CATTTAAGGTGAAGGGGTTG+TGG | 0.403530 | 2_1:-3938318 | Msa0188740:CDS |
| GCTGAAATTTAAATGCTTTG+TGG | 0.407613 | 2_1:-3938006 | Msa0188740:three_prime_UTR |
| TGTTTGATTTGCAGGATTCT+GGG | 0.410419 | 2_1:-3938509 | Msa0188740:intron |
| GAAACACCCATCTGAAAATC+AGG | 0.417209 | 2_1:+3940625 | None:intergenic |
| TTTCCTGCAGTTGCCCGATT+GGG | 0.425435 | 2_1:-3940334 | Msa0188740:intron |
| AGAAGGTCAAGAGGATTCTT+GGG | 0.433602 | 2_1:+3938804 | None:intergenic |
| AGAGATTCCAAAATTTATCA+TGG | 0.435888 | 2_1:-3938281 | Msa0188740:CDS |
| TATTGGTTTCGCTAAACTCT+TGG | 0.436845 | 2_1:-3939069 | Msa0188740:CDS |
| TTTGTGACCCTGAACAAGGT+TGG | 0.442505 | 2_1:-3938415 | Msa0188740:CDS |
| ATCCAGAGGGATACTCTCTC+TGG | 0.443260 | 2_1:-3938477 | Msa0188740:CDS |
| CAAATTGTTGTGACCCAATC+GGG | 0.445051 | 2_1:+3940321 | None:intergenic |
| GGGTTCATGTTGATAAATTG+AGG | 0.453213 | 2_1:+3940592 | None:intergenic |
| AAATATAGAATTTGTAACTC+TGG | 0.457667 | 2_1:+3937959 | None:intergenic |
| GACCTCACGGAAGTTCCTCT+TGG | 0.467302 | 2_1:+3938731 | None:intergenic |
| AAAAGAGCCTCTCCCTCAAA+TGG | 0.468428 | 2_1:+3938160 | None:intergenic |
| ATTTCTGCAGAGGATGGATC+TGG | 0.469227 | 2_1:-3938389 | Msa0188740:CDS |
| TAGCCTCAGTCTGCTTAACC+TGG | 0.481958 | 2_1:+3938961 | None:intergenic |
| TCATCCAAAATCATCTTACT+TGG | 0.482283 | 2_1:+3938777 | None:intergenic |
| CTCTCAAAGACAGGACCATC+AGG | 0.483996 | 2_1:+3940459 | None:intergenic |
| ACAAATTGTTGTGACCCAAT+CGG | 0.484795 | 2_1:+3940320 | None:intergenic |
| AAGTAAGGACTAAACTTAGA+AGG | 0.485815 | 2_1:+3937829 | None:intergenic |
| TGCTGAACCATTTGAGGGAG+AGG | 0.491080 | 2_1:-3938167 | Msa0188740:CDS |
| TCCAAAATCATCTTACTTGG+AGG | 0.494526 | 2_1:+3938780 | None:intergenic |
| TGTGACCCTGAACAAGGTTG+GGG | 0.494527 | 2_1:-3938413 | Msa0188740:CDS |
| GAGCTGCGCGTTGGAAGCCA+TGG | 0.497491 | 2_1:-3940831 | Msa0188740:exon |
| GAAGATGCTGAACCATTTGA+GGG | 0.499250 | 2_1:-3938172 | Msa0188740:CDS |
| ATCTGCTAAGCAGCAGCCTA+AGG | 0.499718 | 2_1:-3938925 | Msa0188740:CDS |
| TGAAGATGCTGAACCATTTG+AGG | 0.504616 | 2_1:-3938173 | Msa0188740:CDS |
| TTTCCGCAAGATATTAGGCC+AGG | 0.506830 | 2_1:-3938979 | Msa0188740:CDS |
| GAGCCTCCATTTAAGGTGAA+GGG | 0.508653 | 2_1:-3938325 | Msa0188740:CDS |
| GGTTCATGTTGATAAATTGA+GGG | 0.510474 | 2_1:+3940593 | None:intergenic |
| TGCTGCTTAGCAGATGGAAT+AGG | 0.510683 | 2_1:+3938933 | None:intergenic |
| GAAAACTAGTTCCAGGATTG+TGG | 0.513494 | 2_1:-3938117 | Msa0188740:three_prime_UTR |
| ATATCTTGCGGAAATTGGGC+TGG | 0.518090 | 2_1:+3938988 | None:intergenic |
| TCATCTTACTTGGAGGAAGA+AGG | 0.519375 | 2_1:+3938787 | None:intergenic |
| TTCCGTGAGGTCGCAATCAA+AGG | 0.519400 | 2_1:-3938720 | Msa0188740:intron |
| CTCACAATACCTACTTGGTC+GGG | 0.524651 | 2_1:-3939136 | Msa0188740:CDS |
| TTATGACAAAACCACAATCC+TGG | 0.525090 | 2_1:+3938106 | None:intergenic |
| AGCGAAACCAATATACAAGT+TGG | 0.525950 | 2_1:+3939079 | None:intergenic |
| CAAAGATGAACCAAAGAAAG+TGG | 0.527852 | 2_1:-3938886 | Msa0188740:CDS |
| CGGCATATCCAAGTCTTGGC+AGG | 0.531508 | 2_1:+3939721 | None:intergenic |
| TTCGCTCAAGAGAGCACTTG+AGG | 0.540956 | 2_1:-3939177 | Msa0188740:CDS |
| AACCAGAGAGAGTATCCCTC+TGG | 0.541067 | 2_1:+3938475 | None:intergenic |
| GCTCACAATACCTACTTGGT+CGG | 0.543458 | 2_1:-3939137 | Msa0188740:CDS |
| TAGGCGGCATATCCAAGTCT+TGG | 0.546133 | 2_1:+3939717 | None:intergenic |
| CCATCAGGAGTTTCCAAGAC+CGG | 0.547363 | 2_1:+3940474 | None:intergenic |
| TACCTTTGATTGCGACCTCA+CGG | 0.549156 | 2_1:+3938718 | None:intergenic |
| AGTAATGCCATTGCTCGCTA+TGG | 0.549245 | 2_1:-3940438 | Msa0188740:intron |
| ACAACTTACTGGAGGAAAGT+AGG | 0.550453 | 2_1:+3939698 | None:intergenic |
| TTAGGCTGCTGCTTAGCAGA+TGG | 0.550675 | 2_1:+3938927 | None:intergenic |
| AACGAGAGAGAGCTGCGCGT+TGG | 0.552923 | 2_1:-3940840 | Msa0188740:five_prime_UTR |
| GCCCAAAGTAGAAGTTGAAG+AGG | 0.556725 | 2_1:-3938844 | Msa0188740:CDS |
| AGCATCTTCAATCATCTGAC+TGG | 0.558457 | 2_1:+3938186 | None:intergenic |
| CTGATTGCTGCTGAATATGT+TGG | 0.559330 | 2_1:-3940667 | Msa0188740:CDS |
| AAGTTGTACCTGCCAAGACT+TGG | 0.560946 | 2_1:-3939729 | Msa0188740:CDS |
| AGAGCCTCCATTTAAGGTGA+AGG | 0.562476 | 2_1:-3938326 | Msa0188740:CDS |
| TCTTGCTCACAATACCTACT+TGG | 0.565718 | 2_1:-3939141 | Msa0188740:CDS |
| AATCAATCCACTGGTCAATG+TGG | 0.571450 | 2_1:+3939784 | None:intergenic |
| TATACTGACCAAGGCCGCCA+TGG | 0.572433 | 2_1:+3940814 | None:intergenic |
| CATCAGGAGTTTCCAAGACC+GGG | 0.574741 | 2_1:+3940475 | None:intergenic |
| CAAAGTAGAAGTTGAAGAGG+AGG | 0.579683 | 2_1:-3938841 | Msa0188740:CDS |
| AGATCTGATCGGAAAGCGAA+AGG | 0.582415 | 2_1:+3940865 | None:intergenic |
| GACTCTACTCTAACACCAAG+AGG | 0.583602 | 2_1:-3938746 | Msa0188740:CDS |
| ATCAATCCACTGGTCAATGT+GGG | 0.585165 | 2_1:+3939785 | None:intergenic |
| CTTGGAGGAAGAAGGTCAAG+AGG | 0.586796 | 2_1:+3938795 | None:intergenic |
| CAGCATACCATAGCGAGCAA+TGG | 0.587213 | 2_1:+3940431 | None:intergenic |
| TTCATCAGAGATGTCAACCT+TGG | 0.587509 | 2_1:+3938225 | None:intergenic |
| TTCCGTTGTTGGGAGCGTGA+AGG | 0.588156 | 2_1:+3940710 | None:intergenic |
| CCGGTCTTGGAAACTCCTGA+TGG | 0.589673 | 2_1:-3940474 | Msa0188740:CDS |
| GTTCATGTTGATAAATTGAG+GGG | 0.590470 | 2_1:+3940594 | None:intergenic |
| ATGGCATTACTCTCAAAGAC+AGG | 0.591005 | 2_1:+3940450 | None:intergenic |
| AGCCTCCATTTAAGGTGAAG+GGG | 0.592740 | 2_1:-3938324 | Msa0188740:CDS |
| CAACATGAACCCTATTGGAA+AGG | 0.595932 | 2_1:-3940581 | Msa0188740:intron |
| CTGCGCGTTGGAAGCCATGG+CGG | 0.597364 | 2_1:-3940828 | Msa0188740:exon |
| CTGGGACATGTATGATCCAG+AGG | 0.600612 | 2_1:-3938491 | Msa0188740:CDS |
| ATCCTTCACGCTCCCAACAA+CGG | 0.601253 | 2_1:-3940712 | Msa0188740:CDS |
| TTCAGGCCCACATTGACCAG+TGG | 0.607287 | 2_1:-3939791 | Msa0188740:intron |
| TTGTTTGATTCTCTGAACGA+GGG | 0.612831 | 2_1:-3937908 | Msa0188740:three_prime_UTR |
| TGCTTAGCAGATGGAATAGG+TGG | 0.613551 | 2_1:+3938936 | None:intergenic |
| CAAAAGTATCTCTCAACATG+AGG | 0.614280 | 2_1:+3939023 | None:intergenic |
| ATGTTGTTATAATGTCAGCA+AGG | 0.622569 | 2_1:+3939102 | None:intergenic |
| TTTGTTTGATTCTCTGAACG+AGG | 0.622904 | 2_1:-3937909 | Msa0188740:three_prime_UTR |
| TAACCTGGCCTAATATCTTG+CGG | 0.626332 | 2_1:+3938976 | None:intergenic |
| TGTTGTTATAATGTCAGCAA+GGG | 0.629008 | 2_1:+3939103 | None:intergenic |
| CATGGATGAATGCTATGACA+TGG | 0.631015 | 2_1:-3938263 | Msa0188740:CDS |
| GAAATTGGGCTGGTTGACCA+AGG | 0.645258 | 2_1:+3938998 | None:intergenic |
| GTGACCCTGAACAAGGTTGG+GGG | 0.650105 | 2_1:-3938412 | Msa0188740:CDS |
| TCTCTCGTTTGAGATCTGAT+CGG | 0.653348 | 2_1:+3940854 | None:intergenic |
| AACCCCTTCACCTTAAATGG+AGG | 0.653598 | 2_1:+3938322 | None:intergenic |
| ATGACATGGAGCTCTATGAG+TGG | 0.662196 | 2_1:-3938249 | Msa0188740:CDS |
| TGGGACATGTATGATCCAGA+GGG | 0.668464 | 2_1:-3938490 | Msa0188740:CDS |
| AACAGAATGCCCGACCAAGT+AGG | 0.668821 | 2_1:+3939127 | None:intergenic |
| CTCAACATGAGGAAACTCTG+AGG | 0.714280 | 2_1:+3939034 | None:intergenic |
| AGGCCAGGTTAAGCAGACTG+AGG | 0.721460 | 2_1:-3938964 | Msa0188740:CDS |
| GGAGCTCTATGAGTGGACCA+AGG | 0.731462 | 2_1:-3938242 | Msa0188740:CDS |
| ACTTACTGGAGGAAAGTAGG+CGG | 0.737958 | 2_1:+3939701 | None:intergenic |
| CACCAAGAGGAACTTCCGTG+AGG | 0.751991 | 2_1:-3938733 | Msa0188740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAATAGATTTAATCT+TGG | + | chr2_1:3938729-3938748 | None:intergenic | 10.0% |
| !!! | AAGATTAAATCTATTTTAAT+TGG | - | chr2_1:3938728-3938747 | Msa0188740:CDS | 10.0% |
| !! | AAAACTATAAAAATTAAGTA+AGG | + | chr2_1:3940888-3940907 | None:intergenic | 10.0% |
| !! | ACCATATAATAATAAAACAA+AGG | - | chr2_1:3938440-3938459 | Msa0188740:CDS | 15.0% |
| !!! | TATCCTTTTTGATATTTATT+GGG | - | chr2_1:3938683-3938702 | Msa0188740:intron | 15.0% |
| !! | AAAAAAAAAAAACAACAACA+TGG | + | chr2_1:3939030-3939049 | None:intergenic | 15.0% |
| !! | CAATTATATAATATTTGAGT+TGG | - | chr2_1:3939107-3939126 | Msa0188740:CDS | 15.0% |
| !!! | GCCTTTGTTTTATTATTATA+TGG | + | chr2_1:3938444-3938463 | None:intergenic | 20.0% |
| !!! | GTATCCTTTTTGATATTTAT+TGG | - | chr2_1:3938682-3938701 | Msa0188740:intron | 20.0% |
| !! | TTTCCCAATAAATATCAAAA+AGG | + | chr2_1:3938689-3938708 | None:intergenic | 20.0% |
| !! | TATATATAAACCACATACAA+GGG | + | chr2_1:3938763-3938782 | None:intergenic | 20.0% |
| !!! | TATTTGAATTTTGTTGTTTC+AGG | - | chr2_1:3938891-3938910 | Msa0188740:CDS | 20.0% |
| !! | AAAACATTTGTGAATAATTG+AGG | + | chr2_1:3939133-3939152 | None:intergenic | 20.0% |
| !!! | TTTTCTGAAATCAATTAGTT+TGG | - | chr2_1:3939149-3939168 | Msa0188740:CDS | 20.0% |
| !! | TAGACACAAATTTCAAAAAA+GGG | + | chr2_1:3939253-3939272 | None:intergenic | 20.0% |
| !! | TTAGACACAAATTTCAAAAA+AGG | + | chr2_1:3939254-3939273 | None:intergenic | 20.0% |
| !! | TTGAAAAAAAAAGAAACTAC+AGG | + | chr2_1:3940020-3940039 | None:intergenic | 20.0% |
| !!! | AATATACTATTCTCTGTTTT+TGG | - | chr2_1:3940086-3940105 | Msa0188740:intron | 20.0% |
| !! | AAATATAGAATTTGTAACTC+TGG | + | chr2_1:3940743-3940762 | None:intergenic | 20.0% |
| !! | CAAATTCTATATTTCTCTTT+CGG | - | chr2_1:3940749-3940768 | Msa0188740:intron | 20.0% |
| !! | TGTGTTTATCATAGAAAAAA+GGG | - | chr2_1:3940814-3940833 | Msa0188740:intron | 20.0% |
| !!! | AAAAGGGTTAAATATGTTTT+TGG | - | chr2_1:3940830-3940849 | Msa0188740:exon | 20.0% |
| ! | TAATAATCAACAACAAGTAG+TGG | + | chr2_1:3937951-3937970 | None:intergenic | 25.0% |
| !! | ATCTAAACTAGAATCTTTTC+TGG | + | chr2_1:3938569-3938588 | None:intergenic | 25.0% |
| ! | CTATATATAAACCACATACA+AGG | + | chr2_1:3938764-3938783 | None:intergenic | 25.0% |
| ! | TGTATGTGGTTTATATATAG+AGG | - | chr2_1:3938764-3938783 | Msa0188740:CDS | 25.0% |
| ! | GTATGTGGTTTATATATAGA+GGG | - | chr2_1:3938765-3938784 | Msa0188740:CDS | 25.0% |
| ! | TATAATTGCTATCAATACTC+AGG | + | chr2_1:3939095-3939114 | None:intergenic | 25.0% |
| ! | TGAAATTTGTGTCTAAATGA+AGG | - | chr2_1:3939258-3939277 | Msa0188740:intron | 25.0% |
| !! | TTGCTGAATATTTTCAAAAG+GGG | + | chr2_1:3939328-3939347 | None:intergenic | 25.0% |
| !! | CTTGCTGAATATTTTCAAAA+GGG | + | chr2_1:3939329-3939348 | None:intergenic | 25.0% |
| !!! | ACTTGCTGAATATTTTCAAA+AGG | + | chr2_1:3939330-3939349 | None:intergenic | 25.0% |
| ! | AGGGAAAATATTCAGTAAAA+GGG | + | chr2_1:3939457-3939476 | None:intergenic | 25.0% |
| ! | AAGGGAAAATATTCAGTAAA+AGG | + | chr2_1:3939458-3939477 | None:intergenic | 25.0% |
| ! | TCAGACACAAATTTCAAAAA+GGG | + | chr2_1:3939476-3939495 | None:intergenic | 25.0% |
| ! | TTCAGACACAAATTTCAAAA+AGG | + | chr2_1:3939477-3939496 | None:intergenic | 25.0% |
| ! | TGAAATTTGTGTCTGAATAA+AGG | - | chr2_1:3939480-3939499 | Msa0188740:intron | 25.0% |
| ! | AGAGAATAGTATATTTCCAA+AGG | + | chr2_1:3940081-3940100 | None:intergenic | 25.0% |
| ! | TTTGGAAAGATGCTTATAAT+TGG | - | chr2_1:3940347-3940366 | Msa0188740:intron | 25.0% |
| ! | AGAGATTCCAAAATTTATCA+TGG | - | chr2_1:3940418-3940437 | Msa0188740:intron | 25.0% |
| !! | CATTCATCCATGATAAATTT+TGG | + | chr2_1:3940428-3940447 | None:intergenic | 25.0% |
| ! | GTGTGTTTATCATAGAAAAA+AGG | - | chr2_1:3940813-3940832 | Msa0188740:intron | 25.0% |
| ATAGAAAACGAAGAACAAAG+AGG | + | chr2_1:3937919-3937938 | None:intergenic | 30.0% | |
| !! | ACATTTTTGTTTCCGTTGTT+GGG | + | chr2_1:3938002-3938021 | None:intergenic | 30.0% |
| !! | AACATTTTTGTTTCCGTTGT+TGG | + | chr2_1:3938003-3938022 | None:intergenic | 30.0% |
| ! | GTTCATGTTGATAAATTGAG+GGG | + | chr2_1:3938108-3938127 | None:intergenic | 30.0% |
| ! | GGTTCATGTTGATAAATTGA+GGG | + | chr2_1:3938109-3938128 | None:intergenic | 30.0% |
| TTTATCAACATGAACCCTAT+TGG | - | chr2_1:3938113-3938132 | Msa0188740:three_prime_UTR | 30.0% | |
| TATCATTCCTTCTTTCTTTC+AGG | - | chr2_1:3938200-3938219 | Msa0188740:CDS | 30.0% | |
| AATCAGAGAAAAAGTAAGTG+TGG | + | chr2_1:3938604-3938623 | None:intergenic | 30.0% | |
| ATAGATTTAATCTTGGCAGT+TGG | + | chr2_1:3938722-3938741 | None:intergenic | 30.0% | |
| TATAGAGGGTAAATTTGCAA+AGG | - | chr2_1:3938779-3938798 | Msa0188740:CDS | 30.0% | |
| ! | TGCTGAATATTTTCAAAAGG+GGG | + | chr2_1:3939327-3939346 | None:intergenic | 30.0% |
| ! | ATCTCTTTTAACATCTCAGT+TGG | - | chr2_1:3939391-3939410 | Msa0188740:intron | 30.0% |
| GGGAAAATATTCAGTAAAAG+GGG | + | chr2_1:3939456-3939475 | None:intergenic | 30.0% | |
| TGTTGTTATAATGTCAGCAA+GGG | + | chr2_1:3939599-3939618 | None:intergenic | 30.0% | |
| ATGTTGTTATAATGTCAGCA+AGG | + | chr2_1:3939600-3939619 | None:intergenic | 30.0% | |
| ACAACATCCAACTTGTATAT+TGG | - | chr2_1:3939613-3939632 | Msa0188740:intron | 30.0% | |
| !!! | TTTGGTTCATCTTTGGTTTT+GGG | + | chr2_1:3939808-3939827 | None:intergenic | 30.0% |
| TCATCCAAAATCATCTTACT+TGG | + | chr2_1:3939925-3939944 | None:intergenic | 30.0% | |
| TGATTGTAGCTTATATCCTT+TGG | - | chr2_1:3940062-3940081 | Msa0188740:intron | 30.0% | |
| !! | TAGTTTTCACTTAAAGCACT+TGG | + | chr2_1:3940570-3940589 | None:intergenic | 30.0% |
| TTTAAGTGAAAACTAGTTCC+AGG | - | chr2_1:3940575-3940594 | Msa0188740:intron | 30.0% | |
| !!! | GTGGTTTTGTCATAACTTTT+TGG | - | chr2_1:3940601-3940620 | Msa0188740:CDS | 30.0% |
| TCATCACTATAGCAGAAAAT+AGG | + | chr2_1:3940645-3940664 | None:intergenic | 30.0% | |
| ! | ATTTTCTGCTATAGTGATGA+AGG | - | chr2_1:3940645-3940664 | Msa0188740:CDS | 30.0% |
| GCTGAAATTTAAATGCTTTG+TGG | - | chr2_1:3940693-3940712 | Msa0188740:CDS | 30.0% | |
| ! | TTGTGGTAGCTTAATTTTGA+TGG | - | chr2_1:3940710-3940729 | Msa0188740:CDS | 30.0% |
| ! | TAGAAGGTCGCAATTTTATA+GGG | + | chr2_1:3940857-3940876 | None:intergenic | 30.0% |
| ! | TTAGAAGGTCGCAATTTTAT+AGG | + | chr2_1:3940858-3940877 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTAGA+AGG | + | chr2_1:3940873-3940892 | None:intergenic | 30.0% | |
| !! | ATTGACTCCTGATTTTCAGA+TGG | - | chr2_1:3938067-3938086 | Msa0188740:three_prime_UTR | 35.0% |
| ! | TTGACTCCTGATTTTCAGAT+GGG | - | chr2_1:3938068-3938087 | Msa0188740:three_prime_UTR | 35.0% |
| !! | GATAAATTGAGGGGTTTTGT+TGG | + | chr2_1:3938099-3938118 | None:intergenic | 35.0% |
| ! | GGGTTCATGTTGATAAATTG+AGG | + | chr2_1:3938110-3938129 | None:intergenic | 35.0% |
| CAATACCTACCTTTCCAATA+GGG | + | chr2_1:3938130-3938149 | None:intergenic | 35.0% | |
| ACAATACCTACCTTTCCAAT+AGG | + | chr2_1:3938131-3938150 | None:intergenic | 35.0% | |
| ACAAATTGTTGTGACCCAAT+CGG | + | chr2_1:3938382-3938401 | None:intergenic | 35.0% | |
| ! | TTGGGTCACAACAATTTGTT+TGG | - | chr2_1:3938383-3938402 | Msa0188740:CDS | 35.0% |
| TGGATCATCTCTTATTGATC+AGG | - | chr2_1:3938403-3938422 | Msa0188740:CDS | 35.0% | |
| ATAATAAAACAAAGGCCGTG+TGG | - | chr2_1:3938448-3938467 | Msa0188740:CDS | 35.0% | |
| ATTTAATCTTGGCAGTTGGT+TGG | + | chr2_1:3938718-3938737 | None:intergenic | 35.0% | |
| ATAACTTCCATGAGAACACA+GGG | + | chr2_1:3938822-3938841 | None:intergenic | 35.0% | |
| AATAACTTCCATGAGAACAC+AGG | + | chr2_1:3938823-3938842 | None:intergenic | 35.0% | |
| TCAAATAACTTCCATGCGAA+CGG | + | chr2_1:3938878-3938897 | None:intergenic | 35.0% | |
| GAGAAGAAAAATCAATCCAC+TGG | + | chr2_1:3938927-3938946 | None:intergenic | 35.0% | |
| !! | GTGGATTGATTTTTCTTCTC+TGG | - | chr2_1:3938927-3938946 | Msa0188740:CDS | 35.0% |
| CAGGTACAACTTCATGATAT+TGG | + | chr2_1:3938962-3938981 | None:intergenic | 35.0% | |
| ! | AGAAGAGATACATGGATTGT+TGG | + | chr2_1:3939178-3939197 | None:intergenic | 35.0% |
| GAGATGTTAGAAGAGATACA+TGG | + | chr2_1:3939186-3939205 | None:intergenic | 35.0% | |
| ATCTCTTCTAACATCTCAGA+TGG | - | chr2_1:3939189-3939208 | Msa0188740:CDS | 35.0% | |
| TTTGTGTCTAAATGAAGGAC+TGG | - | chr2_1:3939263-3939282 | Msa0188740:intron | 35.0% | |
| ! | GCTGAATATTTTCAAAAGGG+GGG | + | chr2_1:3939326-3939345 | None:intergenic | 35.0% |
| TTGTGTCTGAATAAAGGTAG+AGG | - | chr2_1:3939486-3939505 | Msa0188740:intron | 35.0% | |
| AGCGAAACCAATATACAAGT+TGG | + | chr2_1:3939623-3939642 | None:intergenic | 35.0% | |
| !! | TATTGGTTTCGCTAAACTCT+TGG | - | chr2_1:3939630-3939649 | Msa0188740:intron | 35.0% |
| !! | CAAAAGTATCTCTCAACATG+AGG | + | chr2_1:3939679-3939698 | None:intergenic | 35.0% |
| ! | CTCATGTTGAGAGATACTTT+TGG | - | chr2_1:3939677-3939696 | Msa0188740:intron | 35.0% |
| CCTAATATCTTGCGGAAATT+GGG | + | chr2_1:3939718-3939737 | None:intergenic | 35.0% | |
| !! | CTTTGGTTCATCTTTGGTTT+TGG | + | chr2_1:3939809-3939828 | None:intergenic | 35.0% |
| ! | CACTTTCTTTGGTTCATCTT+TGG | + | chr2_1:3939815-3939834 | None:intergenic | 35.0% |
| CAAAGATGAACCAAAGAAAG+TGG | - | chr2_1:3939813-3939832 | Msa0188740:intron | 35.0% | |
| ! | TCTGATTTAGCCACTTTCTT+TGG | + | chr2_1:3939826-3939845 | None:intergenic | 35.0% |
| ! | AACTTCTACTTTGGGCTTTT+CGG | + | chr2_1:3939851-3939870 | None:intergenic | 35.0% |
| TCCTCTTCAACTTCTACTTT+GGG | + | chr2_1:3939859-3939878 | None:intergenic | 35.0% | |
| ! | TCCTCCAAGTAAGATGATTT+TGG | - | chr2_1:3939918-3939937 | Msa0188740:intron | 35.0% |
| TCCAAAATCATCTTACTTGG+AGG | + | chr2_1:3939922-3939941 | None:intergenic | 35.0% | |
| ! | GTAAGATGATTTTGGATGAC+TGG | - | chr2_1:3939926-3939945 | Msa0188740:intron | 35.0% |
| ! | TTCAAGCTTTTGTAGCTTCT+AGG | - | chr2_1:3940035-3940054 | Msa0188740:intron | 35.0% |
| !! | AATTCCTGTGTTTGATTTGC+AGG | - | chr2_1:3940182-3940201 | Msa0188740:intron | 35.0% |
| !! | TGTTTGATTTGCAGGATTCT+GGG | - | chr2_1:3940190-3940209 | Msa0188740:intron | 35.0% |
| !!! | ATTTTGGAATCTCTTGTCCA+CGG | + | chr2_1:3940412-3940431 | None:intergenic | 35.0% |
| TTATGACAAAACCACAATCC+TGG | + | chr2_1:3940596-3940615 | None:intergenic | 35.0% | |
| CTATATTTCTCTTTCGGCTT+AGG | - | chr2_1:3940755-3940774 | Msa0188740:intron | 35.0% | |
| TTTGTTTGATTCTCTGAACG+AGG | - | chr2_1:3940790-3940809 | Msa0188740:intron | 35.0% | |
| TTGTTTGATTCTCTGAACGA+GGG | - | chr2_1:3940791-3940810 | Msa0188740:intron | 35.0% | |
| ! | TCTCTCGTTTGAGATCTGAT+CGG | + | chr2_1:3937848-3937867 | None:intergenic | 40.0% |
| GAGAGTGAATATACTGACCA+AGG | + | chr2_1:3937897-3937916 | None:intergenic | 40.0% | |
| CTGATTGCTGCTGAATATGT+TGG | - | chr2_1:3938032-3938051 | Msa0188740:three_prime_UTR | 40.0% | |
| GAAACACCCATCTGAAAATC+AGG | + | chr2_1:3938077-3938096 | None:intergenic | 40.0% | |
| CAACATGAACCCTATTGGAA+AGG | - | chr2_1:3938118-3938137 | Msa0188740:three_prime_UTR | 40.0% | |
| ATGAACCCTATTGGAAAGGT+AGG | - | chr2_1:3938122-3938141 | Msa0188740:exon | 40.0% | |
| ATGGCATTACTCTCAAAGAC+AGG | + | chr2_1:3938252-3938271 | None:intergenic | 40.0% | |
| CAAATTGTTGTGACCCAATC+GGG | + | chr2_1:3938381-3938400 | None:intergenic | 40.0% | |
| TTGAAAACCAAGAGACCACA+CGG | + | chr2_1:3938466-3938485 | None:intergenic | 40.0% | |
| ! | CACAGGGATATGCAATCTTT+TGG | + | chr2_1:3938806-3938825 | None:intergenic | 40.0% |
| ATCAATCCACTGGTCAATGT+GGG | + | chr2_1:3938917-3938936 | None:intergenic | 40.0% | |
| AATCAATCCACTGGTCAATG+TGG | + | chr2_1:3938918-3938937 | None:intergenic | 40.0% | |
| ACAACTTACTGGAGGAAAGT+AGG | + | chr2_1:3939004-3939023 | None:intergenic | 40.0% | |
| ! | TATTTTCAAAAGGGGGGAGT+TGG | + | chr2_1:3939320-3939339 | None:intergenic | 40.0% |
| TTCAGTAAAAGGGGAAGAGT+TGG | + | chr2_1:3939447-3939466 | None:intergenic | 40.0% | |
| TCTTGCTCACAATACCTACT+TGG | - | chr2_1:3939558-3939577 | Msa0188740:intron | 40.0% | |
| ! | TGAGAGATACTTTTGGACCT+TGG | - | chr2_1:3939684-3939703 | Msa0188740:intron | 40.0% |
| CCCAATTTCCGCAAGATATT+AGG | - | chr2_1:3939715-3939734 | Msa0188740:CDS | 40.0% | |
| GCCTAATATCTTGCGGAAAT+TGG | + | chr2_1:3939719-3939738 | None:intergenic | 40.0% | |
| TAACCTGGCCTAATATCTTG+CGG | + | chr2_1:3939726-3939745 | None:intergenic | 40.0% | |
| ! | ACTTCTACTTTGGGCTTTTC+GGG | + | chr2_1:3939850-3939869 | None:intergenic | 40.0% |
| CTCCTCTTCAACTTCTACTT+TGG | + | chr2_1:3939860-3939879 | None:intergenic | 40.0% | |
| CAAAGTAGAAGTTGAAGAGG+AGG | - | chr2_1:3939858-3939877 | Msa0188740:intron | 40.0% | |
| TCAAGAGGATTCTTGGGTTT+GGG | + | chr2_1:3939892-3939911 | None:intergenic | 40.0% | |
| AGAAGGTCAAGAGGATTCTT+GGG | + | chr2_1:3939898-3939917 | None:intergenic | 40.0% | |
| AAGAAGGTCAAGAGGATTCT+TGG | + | chr2_1:3939899-3939918 | None:intergenic | 40.0% | |
| TCATCTTACTTGGAGGAAGA+AGG | + | chr2_1:3939915-3939934 | None:intergenic | 40.0% | |
| GAATCCTGCAAATCAAACAC+AGG | + | chr2_1:3940189-3940208 | None:intergenic | 40.0% | |
| !! | GTGTTTGATTTGCAGGATTC+TGG | - | chr2_1:3940189-3940208 | Msa0188740:intron | 40.0% |
| ! | TTCTTTTGTGACCCTGAACA+AGG | - | chr2_1:3940280-3940299 | Msa0188740:intron | 40.0% |
| CATGGATGAATGCTATGACA+TGG | - | chr2_1:3940436-3940455 | Msa0188740:intron | 40.0% | |
| TTCATCAGAGATGTCAACCT+TGG | + | chr2_1:3940477-3940496 | None:intergenic | 40.0% | |
| AGCATCTTCAATCATCTGAC+TGG | + | chr2_1:3940516-3940535 | None:intergenic | 40.0% | |
| TGAAGATGCTGAACCATTTG+AGG | - | chr2_1:3940526-3940545 | Msa0188740:intron | 40.0% | |
| GAAGATGCTGAACCATTTGA+GGG | - | chr2_1:3940527-3940546 | Msa0188740:intron | 40.0% | |
| GAAAACTAGTTCCAGGATTG+TGG | - | chr2_1:3940582-3940601 | Msa0188740:CDS | 40.0% | |
| AGATCTGATCGGAAAGCGAA+AGG | + | chr2_1:3937837-3937856 | None:intergenic | 45.0% | |
| ! | TCCTTCTTTCTTTCAGGTCC+CGG | - | chr2_1:3938206-3938225 | Msa0188740:CDS | 45.0% |
| AGTAATGCCATTGCTCGCTA+TGG | - | chr2_1:3938261-3938280 | Msa0188740:CDS | 45.0% | |
| ! | GTTGAAGCATCCCTTGTATG+TGG | - | chr2_1:3938750-3938769 | Msa0188740:CDS | 45.0% |
| TGCATATCCCTGTGTTCTCA+TGG | - | chr2_1:3938812-3938831 | Msa0188740:CDS | 45.0% | |
| AACGGACAAGGAGATAGACA+AGG | + | chr2_1:3938860-3938879 | None:intergenic | 45.0% | |
| AAGTTGTACCTGCCAAGACT+TGG | - | chr2_1:3938970-3938989 | Msa0188740:CDS | 45.0% | |
| ACTTACTGGAGGAAAGTAGG+CGG | + | chr2_1:3939001-3939020 | None:intergenic | 45.0% | |
| CAACATGGCACACAACTTAC+TGG | + | chr2_1:3939015-3939034 | None:intergenic | 45.0% | |
| GCTCACAATACCTACTTGGT+CGG | - | chr2_1:3939562-3939581 | Msa0188740:intron | 45.0% | |
| CTCACAATACCTACTTGGTC+GGG | - | chr2_1:3939563-3939582 | Msa0188740:intron | 45.0% | |
| CTCAACATGAGGAAACTCTG+AGG | + | chr2_1:3939668-3939687 | None:intergenic | 45.0% | |
| ATATCTTGCGGAAATTGGGC+TGG | + | chr2_1:3939714-3939733 | None:intergenic | 45.0% | |
| TTTCCGCAAGATATTAGGCC+AGG | - | chr2_1:3939720-3939739 | Msa0188740:CDS | 45.0% | |
| TGCTTAGCAGATGGAATAGG+TGG | + | chr2_1:3939766-3939785 | None:intergenic | 45.0% | |
| ! | TGCTGCTTAGCAGATGGAAT+AGG | + | chr2_1:3939769-3939788 | None:intergenic | 45.0% |
| !! | GTTTTGGGCTTAGACTCCTT+AGG | + | chr2_1:3939793-3939812 | None:intergenic | 45.0% |
| GCCCAAAGTAGAAGTTGAAG+AGG | - | chr2_1:3939855-3939874 | Msa0188740:intron | 45.0% | |
| GTCAAGAGGATTCTTGGGTT+TGG | + | chr2_1:3939893-3939912 | None:intergenic | 45.0% | |
| GACTCTACTCTAACACCAAG+AGG | - | chr2_1:3939953-3939972 | Msa0188740:intron | 45.0% | |
| TACCTTTGATTGCGACCTCA+CGG | + | chr2_1:3939984-3940003 | None:intergenic | 45.0% | |
| !! | GGTCGCAATCAAAGGTATTG+TGG | - | chr2_1:3939987-3940006 | Msa0188740:intron | 45.0% |
| TGGGACATGTATGATCCAGA+GGG | - | chr2_1:3940209-3940228 | Msa0188740:intron | 45.0% | |
| TTTGTGACCCTGAACAAGGT+TGG | - | chr2_1:3940284-3940303 | Msa0188740:intron | 45.0% | |
| TTGTGACCCTGAACAAGGTT+GGG | - | chr2_1:3940285-3940304 | Msa0188740:intron | 45.0% | |
| AAATCCCCCAACCTTGTTCA+GGG | + | chr2_1:3940294-3940313 | None:intergenic | 45.0% | |
| ATTTCTGCAGAGGATGGATC+TGG | - | chr2_1:3940310-3940329 | Msa0188740:CDS | 45.0% | |
| TGGATCAGAGCCTCCATTTA+AGG | - | chr2_1:3940367-3940386 | Msa0188740:intron | 45.0% | |
| ! | AGAGCCTCCATTTAAGGTGA+AGG | - | chr2_1:3940373-3940392 | Msa0188740:intron | 45.0% |
| ! | GAGCCTCCATTTAAGGTGAA+GGG | - | chr2_1:3940374-3940393 | Msa0188740:intron | 45.0% |
| ! | AGCCTCCATTTAAGGTGAAG+GGG | - | chr2_1:3940375-3940394 | Msa0188740:intron | 45.0% |
| AACCCCTTCACCTTAAATGG+AGG | + | chr2_1:3940380-3940399 | None:intergenic | 45.0% | |
| CACAACCCCTTCACCTTAAA+TGG | + | chr2_1:3940383-3940402 | None:intergenic | 45.0% | |
| ! | CATTTAAGGTGAAGGGGTTG+TGG | - | chr2_1:3940381-3940400 | Msa0188740:intron | 45.0% |
| ATGACATGGAGCTCTATGAG+TGG | - | chr2_1:3940450-3940469 | Msa0188740:CDS | 45.0% | |
| AAAAGAGCCTCTCCCTCAAA+TGG | + | chr2_1:3940542-3940561 | None:intergenic | 45.0% | |
| ! | ATTTGAGGGAGAGGCTCTTT+TGG | - | chr2_1:3940541-3940560 | Msa0188740:intron | 45.0% |
| ATCCTTCACGCTCCCAACAA+CGG | - | chr2_1:3937987-3938006 | Msa0188740:three_prime_UTR | 50.0% | |
| ACCGGGACCTGAAAGAAAGA+AGG | + | chr2_1:3938210-3938229 | None:intergenic | 50.0% | |
| ! | TTTCTTTCAGGTCCCGGTCT+TGG | - | chr2_1:3938212-3938231 | Msa0188740:CDS | 50.0% |
| CATCAGGAGTTTCCAAGACC+GGG | + | chr2_1:3938227-3938246 | None:intergenic | 50.0% | |
| CCATCAGGAGTTTCCAAGAC+CGG | + | chr2_1:3938228-3938247 | None:intergenic | 50.0% | |
| CTCTCAAAGACAGGACCATC+AGG | + | chr2_1:3938243-3938262 | None:intergenic | 50.0% | |
| CAGCATACCATAGCGAGCAA+TGG | + | chr2_1:3938271-3938290 | None:intergenic | 50.0% | |
| TTTCCTGCAGTTGCCCGATT+GGG | - | chr2_1:3938365-3938384 | Msa0188740:CDS | 50.0% | |
| TATCTCCTTGTCCGTTCGCA+TGG | - | chr2_1:3938864-3938883 | Msa0188740:CDS | 50.0% | |
| AACTTCCATGCGAACGGACA+AGG | + | chr2_1:3938872-3938891 | None:intergenic | 50.0% | |
| TAGGCGGCATATCCAAGTCT+TGG | + | chr2_1:3938985-3939004 | None:intergenic | 50.0% | |
| CATGGCACACAACTTACTGG+AGG | + | chr2_1:3939012-3939031 | None:intergenic | 50.0% | |
| !! | TTCGCTCAAGAGAGCACTTG+AGG | - | chr2_1:3939522-3939541 | Msa0188740:intron | 50.0% |
| AACAGAATGCCCGACCAAGT+AGG | + | chr2_1:3939575-3939594 | None:intergenic | 50.0% | |
| !! | GAAATTGGGCTGGTTGACCA+AGG | + | chr2_1:3939704-3939723 | None:intergenic | 50.0% |
| TAGCCTCAGTCTGCTTAACC+TGG | + | chr2_1:3939741-3939760 | None:intergenic | 50.0% | |
| ! | TTAGGCTGCTGCTTAGCAGA+TGG | + | chr2_1:3939775-3939794 | None:intergenic | 50.0% |
| ATCTGCTAAGCAGCAGCCTA+AGG | - | chr2_1:3939774-3939793 | Msa0188740:CDS | 50.0% | |
| GGATTCTTGGGTTTGGGCTT+GGG | + | chr2_1:3939886-3939905 | None:intergenic | 50.0% | |
| AGGATTCTTGGGTTTGGGCT+TGG | + | chr2_1:3939887-3939906 | None:intergenic | 50.0% | |
| CTTGGAGGAAGAAGGTCAAG+AGG | + | chr2_1:3939907-3939926 | None:intergenic | 50.0% | |
| TTCCGTGAGGTCGCAATCAA+AGG | - | chr2_1:3939979-3939998 | Msa0188740:intron | 50.0% | |
| CTGGGACATGTATGATCCAG+AGG | - | chr2_1:3940208-3940227 | Msa0188740:intron | 50.0% | |
| ATCCAGAGGGATACTCTCTC+TGG | - | chr2_1:3940222-3940241 | Msa0188740:intron | 50.0% | |
| !! | AACCAGAGAGAGTATCCCTC+TGG | + | chr2_1:3940227-3940246 | None:intergenic | 50.0% |
| TGTGACCCTGAACAAGGTTG+GGG | - | chr2_1:3940286-3940305 | Msa0188740:intron | 50.0% | |
| GAAATCCCCCAACCTTGTTC+AGG | + | chr2_1:3940295-3940314 | None:intergenic | 50.0% | |
| !! | CTGGCTCGCAAGTATGCTTT+TGG | - | chr2_1:3940329-3940348 | Msa0188740:intron | 50.0% |
| TGCTGAACCATTTGAGGGAG+AGG | - | chr2_1:3940532-3940551 | Msa0188740:intron | 50.0% | |
| TATACTGACCAAGGCCGCCA+TGG | + | chr2_1:3937888-3937907 | None:intergenic | 55.0% | |
| ! | TTCCGTTGTTGGGAGCGTGA+AGG | + | chr2_1:3937992-3938011 | None:intergenic | 55.0% |
| CCGGTCTTGGAAACTCCTGA+TGG | - | chr2_1:3938225-3938244 | Msa0188740:CDS | 55.0% | |
| CTTTCCTGCAGTTGCCCGAT+TGG | - | chr2_1:3938364-3938383 | Msa0188740:CDS | 55.0% | |
| ACAAAGGCCGTGTGGTCTCT+TGG | - | chr2_1:3938456-3938475 | Msa0188740:CDS | 55.0% | |
| TTCAGGCCCACATTGACCAG+TGG | - | chr2_1:3938908-3938927 | Msa0188740:CDS | 55.0% | |
| CGGCATATCCAAGTCTTGGC+AGG | + | chr2_1:3938981-3939000 | None:intergenic | 55.0% | |
| AGGCCAGGTTAAGCAGACTG+AGG | - | chr2_1:3939735-3939754 | Msa0188740:CDS | 55.0% | |
| CACCAAGAGGAACTTCCGTG+AGG | - | chr2_1:3939966-3939985 | Msa0188740:intron | 55.0% | |
| GACCTCACGGAAGTTCCTCT+TGG | + | chr2_1:3939971-3939990 | None:intergenic | 55.0% | |
| GTGACCCTGAACAAGGTTGG+GGG | - | chr2_1:3940287-3940306 | Msa0188740:intron | 55.0% | |
| AGGTTGGGGGATTTCTGCAG+AGG | - | chr2_1:3940300-3940319 | Msa0188740:CDS | 55.0% | |
| TGGGGGATTTCTGCAGAGGA+TGG | - | chr2_1:3940304-3940323 | Msa0188740:CDS | 55.0% | |
| ! | AAGGGGTTGTGGCTTTTCCG+TGG | - | chr2_1:3940392-3940411 | Msa0188740:intron | 55.0% |
| GGAGCTCTATGAGTGGACCA+AGG | - | chr2_1:3940457-3940476 | Msa0188740:CDS | 55.0% | |
| AACGAGAGAGAGCTGCGCGT+TGG | - | chr2_1:3937859-3937878 | Msa0188740:three_prime_UTR | 60.0% | |
| TGACCCAATCGGGCAACTGC+AGG | + | chr2_1:3938371-3938390 | None:intergenic | 60.0% | |
| GAGCTGCGCGTTGGAAGCCA+TGG | - | chr2_1:3937868-3937887 | Msa0188740:three_prime_UTR | 65.0% | |
| CTGCGCGTTGGAAGCCATGG+CGG | - | chr2_1:3937871-3937890 | Msa0188740:three_prime_UTR | 65.0% | |
| GTTGGAAGCCATGGCGGCCT+TGG | - | chr2_1:3937877-3937896 | Msa0188740:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 3937806 | 3940915 | 3937806 | ID=Msa0188740;Name=Msa0188740 |
| chr2_1 | mRNA | 3937806 | 3940915 | 3937806 | ID=Msa0188740-mRNA-1;Parent=Msa0188740;Name=Msa0188740-mRNA-1;_AED=0.01;_eAED=0.01;_QI=81|1|1|1|1|1|7|332|418 |
| chr2_1 | exon | 3937806 | 3938517 | 3937806 | ID=Msa0188740-mRNA-1:exon:1707;Parent=Msa0188740-mRNA-1 |
| chr2_1 | exon | 3938721 | 3939219 | 3938721 | ID=Msa0188740-mRNA-1:exon:1706;Parent=Msa0188740-mRNA-1 |
| chr2_1 | exon | 3939707 | 3939808 | 3939707 | ID=Msa0188740-mRNA-1:exon:1705;Parent=Msa0188740-mRNA-1 |
| chr2_1 | exon | 3940297 | 3940346 | 3940297 | ID=Msa0188740-mRNA-1:exon:1704;Parent=Msa0188740-mRNA-1 |
| chr2_1 | exon | 3940439 | 3940499 | 3940439 | ID=Msa0188740-mRNA-1:exon:1703;Parent=Msa0188740-mRNA-1 |
| chr2_1 | exon | 3940582 | 3940734 | 3940582 | ID=Msa0188740-mRNA-1:exon:1702;Parent=Msa0188740-mRNA-1 |
| chr2_1 | exon | 3940823 | 3940915 | 3940823 | ID=Msa0188740-mRNA-1:exon:1701;Parent=Msa0188740-mRNA-1 |
| chr2_1 | five_prime_UTR | 3940835 | 3940915 | 3940835 | ID=Msa0188740-mRNA-1:five_prime_utr;Parent=Msa0188740-mRNA-1 |
| chr2_1 | CDS | 3940823 | 3940834 | 3940823 | ID=Msa0188740-mRNA-1:cds;Parent=Msa0188740-mRNA-1 |
| chr2_1 | CDS | 3940582 | 3940734 | 3940582 | ID=Msa0188740-mRNA-1:cds;Parent=Msa0188740-mRNA-1 |
| chr2_1 | CDS | 3940439 | 3940499 | 3940439 | ID=Msa0188740-mRNA-1:cds;Parent=Msa0188740-mRNA-1 |
| chr2_1 | CDS | 3940297 | 3940346 | 3940297 | ID=Msa0188740-mRNA-1:cds;Parent=Msa0188740-mRNA-1 |
| chr2_1 | CDS | 3939707 | 3939808 | 3939707 | ID=Msa0188740-mRNA-1:cds;Parent=Msa0188740-mRNA-1 |
| chr2_1 | CDS | 3938721 | 3939219 | 3938721 | ID=Msa0188740-mRNA-1:cds;Parent=Msa0188740-mRNA-1 |
| chr2_1 | CDS | 3938138 | 3938517 | 3938138 | ID=Msa0188740-mRNA-1:cds;Parent=Msa0188740-mRNA-1 |
| chr2_1 | three_prime_UTR | 3937806 | 3938137 | 3937806 | ID=Msa0188740-mRNA-1:three_prime_utr;Parent=Msa0188740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
