Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479480 | XP_024635479.1 | 90.862 | 766 | 23 | 7 | 1 | 739 | 1 | 746 | 0.0 | 1389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479480 | G7J4N3 | 90.601 | 766 | 23 | 8 | 1 | 739 | 1 | 744 | 0.0 | 1380 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0479480 | 0.814714 | 1.338441e-51 | -8.615850e-47 |
| Msa0007810 | Msa0479480 | -0.819327 | 1.231090e-52 | -8.615850e-47 |
| Msa0009560 | Msa0479480 | -0.804818 | 1.799397e-49 | -8.615850e-47 |
| Msa0011060 | Msa0479480 | -0.805575 | 1.249572e-49 | -8.615850e-47 |
| Msa0011100 | Msa0479480 | -0.803456 | 3.455573e-49 | -8.615850e-47 |
| Msa0033610 | Msa0479480 | 0.814282 | 1.668030e-51 | -8.615850e-47 |
| Msa0036810 | Msa0479480 | 0.819660 | 1.033462e-52 | -8.615850e-47 |
| Msa0037180 | Msa0479480 | 0.815169 | 1.061120e-51 | -8.615850e-47 |
| Msa0040860 | Msa0479480 | -0.809215 | 2.112522e-50 | -8.615850e-47 |
| Msa0045620 | Msa0479480 | 0.820654 | 6.119900e-53 | -8.615850e-47 |
| Msa0050320 | Msa0479480 | -0.805144 | 1.538033e-49 | -8.615850e-47 |
| Msa0050530 | Msa0479480 | 0.823040 | 1.715862e-53 | -8.615850e-47 |
| Msa0056230 | Msa0479480 | -0.817677 | 2.912545e-52 | -8.615850e-47 |
| Msa0075840 | Msa0479480 | 0.830587 | 2.699690e-55 | -8.615850e-47 |
| Msa0081700 | Msa0479480 | -0.808866 | 2.508522e-50 | -8.615850e-47 |
| Msa0089540 | Msa0479480 | 0.813313 | 2.726186e-51 | -8.615850e-47 |
| Msa0089940 | Msa0479480 | 0.802682 | 4.996007e-49 | -8.615850e-47 |
| Msa0092220 | Msa0479480 | 0.813632 | 2.320278e-51 | -8.615850e-47 |
| Msa0094900 | Msa0479480 | -0.800811 | 1.209716e-48 | -8.615850e-47 |
| Msa0099090 | Msa0479480 | -0.809629 | 1.721420e-50 | -8.615850e-47 |
| Msa0100600 | Msa0479480 | 0.814680 | 1.361733e-51 | -8.615850e-47 |
| Msa0100890 | Msa0479480 | 0.832755 | 7.888299e-56 | -8.615850e-47 |
| Msa0127910 | Msa0479480 | -0.811293 | 7.527804e-51 | -8.615850e-47 |
| Msa0132080 | Msa0479480 | -0.816752 | 4.704159e-52 | -8.615850e-47 |
| Msa0136330 | Msa0479480 | 0.800328 | 1.517842e-48 | -8.615850e-47 |
| Msa0154720 | Msa0479480 | -0.802844 | 4.626047e-49 | -8.615850e-47 |
| Msa0168380 | Msa0479480 | 0.820674 | 6.055846e-53 | -8.615850e-47 |
| Msa0169710 | Msa0479480 | 0.806357 | 8.555866e-50 | -8.615850e-47 |
| Msa0173250 | Msa0479480 | 0.830140 | 3.472220e-55 | -8.615850e-47 |
| Msa0174060 | Msa0479480 | -0.819582 | 1.076946e-52 | -8.615850e-47 |
| Msa0179040 | Msa0479480 | 0.805588 | 1.241770e-49 | -8.615850e-47 |
| Msa0183720 | Msa0479480 | 0.805190 | 1.504839e-49 | -8.615850e-47 |
| Msa0188740 | Msa0479480 | 0.833623 | 4.796436e-56 | -8.615850e-47 |
| Msa0192050 | Msa0479480 | 0.846912 | 1.611673e-59 | -8.615850e-47 |
| Msa0195030 | Msa0479480 | 0.812518 | 4.071947e-51 | -8.615850e-47 |
| Msa0211460 | Msa0479480 | 0.810805 | 9.600557e-51 | -8.615850e-47 |
| Msa0216150 | Msa0479480 | -0.802725 | 4.894855e-49 | -8.615850e-47 |
| Msa0219840 | Msa0479480 | 0.810497 | 1.119538e-50 | -8.615850e-47 |
| Msa0225070 | Msa0479480 | -0.834993 | 2.173411e-56 | -8.615850e-47 |
| Msa0237180 | Msa0479480 | 0.817363 | 3.427973e-52 | -8.615850e-47 |
| Msa0371350 | Msa0479480 | -0.824247 | 8.950817e-54 | -8.615850e-47 |
| Msa0379480 | Msa0479480 | 0.809039 | 2.304562e-50 | -8.615850e-47 |
| Msa0380590 | Msa0479480 | 0.802247 | 6.143164e-49 | -8.615850e-47 |
| Msa0385030 | Msa0479480 | 0.965996 | 2.469857e-125 | -8.615850e-47 |
| Msa0388250 | Msa0479480 | 0.821444 | 4.024779e-53 | -8.615850e-47 |
| Msa0390590 | Msa0479480 | -0.811837 | 5.732957e-51 | -8.615850e-47 |
| Msa0403740 | Msa0479480 | -0.805234 | 1.473014e-49 | -8.615850e-47 |
| Msa0404140 | Msa0479480 | 0.800480 | 1.413091e-48 | -8.615850e-47 |
| Msa0416210 | Msa0479480 | 0.837342 | 5.500264e-57 | -8.615850e-47 |
| Msa0417850 | Msa0479480 | -0.804763 | 1.848125e-49 | -8.615850e-47 |
| Msa0419420 | Msa0479480 | -0.837469 | 5.103810e-57 | -8.615850e-47 |
| Msa0422820 | Msa0479480 | 0.813754 | 2.181441e-51 | -8.615850e-47 |
| Msa0422900 | Msa0479480 | 0.807234 | 5.584844e-50 | -8.615850e-47 |
| Msa0429970 | Msa0479480 | 0.837628 | 4.647703e-57 | -8.615850e-47 |
| Msa0430130 | Msa0479480 | 0.807473 | 4.970053e-50 | -8.615850e-47 |
| Msa0433630 | Msa0479480 | 0.866501 | 2.723514e-65 | -8.615850e-47 |
| Msa0435280 | Msa0479480 | 0.855199 | 7.405001e-62 | -8.615850e-47 |
| Msa0436100 | Msa0479480 | 0.804616 | 1.982765e-49 | -8.615850e-47 |
| Msa0456450 | Msa0479480 | -0.807978 | 3.881043e-50 | -8.615850e-47 |
| Msa0457070 | Msa0479480 | -0.813111 | 3.019287e-51 | -8.615850e-47 |
| Msa0469060 | Msa0479480 | 0.821383 | 4.157632e-53 | -8.615850e-47 |
| Msa0477480 | Msa0479480 | 0.809031 | 2.313190e-50 | -8.615850e-47 |
| Msa0479480 | Msa0482760 | 0.805434 | 1.337631e-49 | -8.615850e-47 |
| Msa0479480 | Msa0483090 | -0.802359 | 5.823052e-49 | -8.615850e-47 |
| Msa0479480 | Msa0500420 | 0.805596 | 1.236547e-49 | -8.615850e-47 |
| Msa0479480 | Msa0506750 | 0.810542 | 1.094680e-50 | -8.615850e-47 |
| Msa0479480 | Msa0518410 | 0.819922 | 9.005381e-53 | -8.615850e-47 |
| Msa0479480 | Msa0521510 | 0.836804 | 7.549469e-57 | -8.615850e-47 |
| Msa0479480 | Msa0521530 | 0.841262 | 5.288108e-58 | -8.615850e-47 |
| Msa0479480 | Msa0528310 | 0.828002 | 1.145385e-54 | -8.615850e-47 |
| Msa0479480 | Msa0538050 | -0.804274 | 2.336951e-49 | -8.615850e-47 |
| Msa0479480 | Msa0545750 | -0.815619 | 8.425683e-52 | -8.615850e-47 |
| Msa0479480 | Msa0566460 | 0.801539 | 8.586594e-49 | -8.615850e-47 |
| Msa0479480 | Msa0566930 | 0.801266 | 9.765764e-49 | -8.615850e-47 |
| Msa0479480 | Msa0568460 | -0.819979 | 8.738063e-53 | -8.615850e-47 |
| Msa0479480 | Msa0582460 | 0.811555 | 6.602450e-51 | -8.615850e-47 |
| Msa0479480 | Msa0586200 | 0.808343 | 3.244291e-50 | -8.615850e-47 |
| Msa0479480 | Msa0588500 | 0.800563 | 1.358809e-48 | -8.615850e-47 |
| Msa0479480 | Msa0610240 | -0.814124 | 1.807148e-51 | -8.615850e-47 |
| Msa0479480 | Msa0612880 | -0.812588 | 3.932096e-51 | -8.615850e-47 |
| Msa0479480 | Msa0618840 | 0.816775 | 4.647814e-52 | -8.615850e-47 |
| Msa0479480 | Msa0618990 | 0.839070 | 1.974264e-57 | -8.615850e-47 |
| Msa0479480 | Msa0620080 | 0.803419 | 3.517898e-49 | -8.615850e-47 |
| Msa0479480 | Msa0623310 | 0.819710 | 1.006818e-52 | -8.615850e-47 |
| Msa0479480 | Msa0630440 | 0.816174 | 6.335837e-52 | -8.615850e-47 |
| Msa0479480 | Msa0638300 | -0.804756 | 1.854150e-49 | -8.615850e-47 |
| Msa0479480 | Msa0658120 | 0.804132 | 2.501142e-49 | -8.615850e-47 |
| Msa0479480 | Msa0658520 | -0.807220 | 5.621307e-50 | -8.615850e-47 |
| Msa0479480 | Msa0659020 | -0.852896 | 3.416040e-61 | -8.615850e-47 |
| Msa0479480 | Msa0661480 | 0.802639 | 5.098431e-49 | -8.615850e-47 |
| Msa0479480 | Msa0664070 | 0.802684 | 4.990871e-49 | -8.615850e-47 |
| Msa0479480 | Msa0685390 | -0.811495 | 6.805364e-51 | -8.615850e-47 |
| Msa0479480 | Msa0689830 | 0.857778 | 1.293986e-62 | -8.615850e-47 |
| Msa0479480 | Msa0691740 | -0.807281 | 5.456028e-50 | -8.615850e-47 |
| Msa0479480 | Msa0702020 | -0.807750 | 4.339559e-50 | -8.615850e-47 |
| Msa0479480 | Msa0702690 | -0.835282 | 1.837114e-56 | -8.615850e-47 |
| Msa0479480 | Msa0702970 | 0.805632 | 1.215404e-49 | -8.615850e-47 |
| Msa0479480 | Msa0703430 | -0.816944 | 4.257736e-52 | -8.615850e-47 |
| Msa0479480 | Msa0704690 | 0.825503 | 4.523586e-54 | -8.615850e-47 |
| Msa0479480 | Msa0707360 | 0.804473 | 2.124514e-49 | -8.615850e-47 |
| Msa0479480 | Msa0708980 | 0.810679 | 1.022615e-50 | -8.615850e-47 |
| Msa0479480 | Msa0733240 | -0.823990 | 1.028279e-53 | -8.615850e-47 |
| Msa0479480 | Msa0745140 | 0.814739 | 1.321553e-51 | -8.615850e-47 |
| Msa0479480 | Msa0751720 | 0.821297 | 4.350795e-53 | -8.615850e-47 |
| Msa0479480 | Msa0761830 | 0.830222 | 3.315558e-55 | -8.615850e-47 |
| Msa0479480 | Msa0774360 | -0.809049 | 2.292625e-50 | -8.615850e-47 |
| Msa0479480 | Msa0776640 | 0.815380 | 9.523465e-52 | -8.615850e-47 |
| Msa0479480 | Msa0790450 | 0.825423 | 4.725508e-54 | -8.615850e-47 |
| Msa0479480 | Msa0802950 | -0.808729 | 2.683687e-50 | -8.615850e-47 |
| Msa0479480 | Msa0804170 | 0.833222 | 6.036513e-56 | -8.615850e-47 |
| Msa0479480 | Msa0812020 | -0.827244 | 1.741439e-54 | -8.615850e-47 |
| Msa0479480 | Msa0825920 | 0.819938 | 8.926956e-53 | -8.615850e-47 |
| Msa0479480 | Msa0842180 | 0.831356 | 1.748586e-55 | -8.615850e-47 |
| Msa0479480 | Msa0846900 | 0.853481 | 2.322930e-61 | -8.615850e-47 |
| Msa0479480 | Msa0852090 | -0.829838 | 4.115393e-55 | -8.615850e-47 |
| Msa0479480 | Msa0852890 | 0.808581 | 2.886424e-50 | -8.615850e-47 |
| Msa0479480 | Msa0853150 | -0.801267 | 9.761933e-49 | -8.615850e-47 |
| Msa0479480 | Msa0880050 | 0.807041 | 6.136080e-50 | -8.615850e-47 |
| Msa0479480 | Msa0898830 | -0.810752 | 9.860359e-51 | -8.615850e-47 |
| Msa0479480 | Msa0903460 | -0.816453 | 5.486370e-52 | -8.615850e-47 |
| Msa0479480 | Msa0906100 | -0.805430 | 1.340269e-49 | -8.615850e-47 |
| Msa0479480 | Msa0926310 | 0.830550 | 2.756965e-55 | -8.615850e-47 |
| Msa0479480 | Msa0935930 | -0.814183 | 1.754081e-51 | -8.615850e-47 |
| Msa0479480 | Msa0941150 | -0.810401 | 1.174128e-50 | -8.615850e-47 |
| Msa0479480 | Msa0967900 | -0.829414 | 5.217103e-55 | -8.615850e-47 |
| Msa0479480 | Msa0982730 | 0.802202 | 6.273022e-49 | -8.615850e-47 |
| Msa0479480 | Msa1000780 | 0.834645 | 2.659631e-56 | -8.615850e-47 |
| Msa0479480 | Msa1014550 | -0.825589 | 4.316624e-54 | -8.615850e-47 |
| Msa0479480 | Msa1025200 | 0.866862 | 2.089612e-65 | -8.615850e-47 |
| Msa0479480 | Msa1025220 | 0.863636 | 2.161258e-64 | -8.615850e-47 |
| Msa0479480 | Msa1026710 | 0.825528 | 4.461773e-54 | -8.615850e-47 |
| Msa0479480 | Msa1039150 | -0.804984 | 1.661411e-49 | -8.615850e-47 |
| Msa0479480 | Msa1050260 | 0.808511 | 2.988039e-50 | -8.615850e-47 |
| Msa0479480 | Msa1055520 | -0.820064 | 8.353613e-53 | -8.615850e-47 |
| Msa0479480 | Msa1070630 | -0.812867 | 3.415106e-51 | -8.615850e-47 |
| Msa0479480 | Msa1078590 | -0.822835 | 1.914956e-53 | -8.615850e-47 |
| Msa0479480 | Msa1078760 | -0.819133 | 1.363074e-52 | -8.615850e-47 |
| Msa0479480 | Msa1083630 | 0.826939 | 2.059712e-54 | -8.615850e-47 |
| Msa0479480 | Msa1088400 | -0.801260 | 9.790953e-49 | -8.615850e-47 |
| Msa0479480 | Msa1093190 | -0.835024 | 2.134260e-56 | -8.615850e-47 |
| Msa0479480 | Msa1104020 | -0.807929 | 3.975194e-50 | -8.615850e-47 |
| Msa0479480 | Msa1124210 | 0.838423 | 2.901041e-57 | -8.615850e-47 |
| Msa0479480 | Msa1127200 | 0.809059 | 2.281734e-50 | -8.615850e-47 |
| Msa0479480 | Msa1128620 | 0.808782 | 2.615431e-50 | -8.615850e-47 |
| Msa0479480 | Msa1164830 | -0.800552 | 1.365920e-48 | -8.615850e-47 |
| Msa0479480 | Msa1165460 | 0.816836 | 4.503623e-52 | -8.615850e-47 |
| Msa0479480 | Msa1167360 | 0.802325 | 5.919615e-49 | -8.615850e-47 |
| Msa0479480 | Msa1169590 | -0.820391 | 7.029770e-53 | -8.615850e-47 |
| Msa0479480 | Msa1170320 | 0.800455 | 1.430071e-48 | -8.615850e-47 |
| Msa0479480 | Msa1183910 | 0.806811 | 6.861758e-50 | -8.615850e-47 |
| Msa0479480 | Msa1191530 | -0.807784 | 4.268577e-50 | -8.615850e-47 |
| Msa0479480 | Msa1201170 | 0.806129 | 9.557107e-50 | -8.615850e-47 |
| Msa0479480 | Msa1205270 | -0.836011 | 1.201580e-56 | -8.615850e-47 |
| Msa0479480 | Msa1206040 | 0.802200 | 6.280488e-49 | -8.615850e-47 |
| Msa0479480 | Msa1207710 | -0.813722 | 2.216511e-51 | -8.615850e-47 |
| Msa0479480 | Msa1213470 | -0.815118 | 1.089203e-51 | -8.615850e-47 |
| Msa0479480 | Msa1217890 | 0.806506 | 7.957698e-50 | -8.615850e-47 |
| Msa0479480 | Msa1218610 | 0.808816 | 2.571947e-50 | -8.615850e-47 |
| Msa0479480 | Msa1220580 | 0.814187 | 1.750698e-51 | -8.615850e-47 |
| Msa0479480 | Msa1243630 | -0.807585 | 4.703322e-50 | -8.615850e-47 |
| Msa0479480 | Msa1244220 | -0.803204 | 3.897768e-49 | -8.615850e-47 |
| Msa0479480 | Msa1255030 | -0.801504 | 8.729110e-49 | -8.615850e-47 |
| Msa0479480 | Msa1257960 | -0.801854 | 7.397862e-49 | -8.615850e-47 |
| Msa0479480 | Msa1263610 | -0.804220 | 2.397746e-49 | -8.615850e-47 |
| Msa0479480 | Msa1266120 | -0.814984 | 1.166227e-51 | -8.615850e-47 |
| Msa0479480 | Msa1286860 | -0.803328 | 3.673619e-49 | -8.615850e-47 |
| Msa0479480 | Msa1297220 | -0.823592 | 1.274953e-53 | -8.615850e-47 |
| Msa0479480 | Msa1298980 | -0.820916 | 5.326552e-53 | -8.615850e-47 |
| Msa0479480 | Msa1300370 | -0.814013 | 1.911978e-51 | -8.615850e-47 |
| Msa0479480 | Msa1320660 | -0.804853 | 1.769678e-49 | -8.615850e-47 |
| Msa0479480 | Msa1323260 | -0.824709 | 6.969765e-54 | -8.615850e-47 |
| Msa0479480 | Msa1328870 | 0.802157 | 6.410747e-49 | -8.615850e-47 |
| Msa0479480 | Msa1334560 | 0.821874 | 3.201205e-53 | -8.615850e-47 |
| Msa0479480 | Msa1342360 | -0.806128 | 9.562196e-50 | -8.615850e-47 |
| Msa0479480 | Msa1342760 | 0.830025 | 3.705162e-55 | -8.615850e-47 |
| Msa0479480 | Msa1343450 | -0.831707 | 1.432752e-55 | -8.615850e-47 |
| Msa0479480 | Msa1347610 | 0.804978 | 1.665957e-49 | -8.615850e-47 |
| Msa0479480 | Msa1352630 | -0.813708 | 2.232256e-51 | -8.615850e-47 |
| Msa0479480 | Msa1361680 | 0.803922 | 2.766086e-49 | -8.615850e-47 |
| Msa0479480 | Msa1366140 | -0.800546 | 1.370131e-48 | -8.615850e-47 |
| Msa0479480 | Msa1367900 | -0.801430 | 9.037515e-49 | -8.615850e-47 |
| Msa0479480 | Msa1371800 | 0.815912 | 7.247920e-52 | -8.615850e-47 |
| Msa0479480 | Msa1376310 | 0.820187 | 7.829869e-53 | -8.615850e-47 |
| Msa0479480 | Msa1379940 | 0.810103 | 1.361072e-50 | -8.615850e-47 |
| Msa0479480 | Msa1381330 | 0.827259 | 1.726715e-54 | -8.615850e-47 |
| Msa0479480 | Msa1384410 | -0.827821 | 1.266025e-54 | -8.615850e-47 |
| Msa0479480 | Msa1384970 | -0.801241 | 9.881568e-49 | -8.615850e-47 |
| Msa0479480 | Msa1392570 | -0.804094 | 2.547164e-49 | -8.615850e-47 |
| Msa0479480 | Msa1395050 | 0.817045 | 4.042200e-52 | -8.615850e-47 |
| Msa0479480 | Msa1399190 | 0.812279 | 4.593385e-51 | -8.615850e-47 |
| Msa0479480 | Msa1402010 | 0.820803 | 5.654177e-53 | -8.615850e-47 |
| Msa0479480 | Msa1413020 | 0.833030 | 6.740558e-56 | -8.615850e-47 |
| Msa0479480 | Msa1420830 | 0.806566 | 7.728722e-50 | -8.615850e-47 |
| Msa0479480 | Msa1423050 | 0.805237 | 1.470826e-49 | -8.615850e-47 |
| Msa0479480 | Msa1431520 | 0.826533 | 2.574848e-54 | -8.615850e-47 |
| Msa0479480 | Msa1447120 | 0.803491 | 3.399290e-49 | -8.615850e-47 |
| Msa0479480 | Msa1450560 | 0.824120 | 9.585660e-54 | -8.615850e-47 |
| Msa0479480 | Msa1458000 | 0.833175 | 6.201329e-56 | -8.615850e-47 |
| Msa0240590 | Msa0479480 | -0.813619 | 2.335566e-51 | -8.615850e-47 |
| Msa0266140 | Msa0479480 | -0.816592 | 5.107948e-52 | -8.615850e-47 |
| Msa0267450 | Msa0479480 | -0.817926 | 2.559701e-52 | -8.615850e-47 |
| Msa0267510 | Msa0479480 | -0.812405 | 4.311287e-51 | -8.615850e-47 |
| Msa0288400 | Msa0479480 | 0.820249 | 7.577886e-53 | -8.615850e-47 |
| Msa0290800 | Msa0479480 | 0.814513 | 1.482842e-51 | -8.615850e-47 |
| Msa0301640 | Msa0479480 | 0.815262 | 1.011644e-51 | -8.615850e-47 |
| Msa0304060 | Msa0479480 | -0.816154 | 6.399892e-52 | -8.615850e-47 |
| Msa0304350 | Msa0479480 | -0.811418 | 7.070330e-51 | -8.615850e-47 |
| Msa0305910 | Msa0479480 | -0.810150 | 1.330014e-50 | -8.615850e-47 |
| Msa0307430 | Msa0479480 | 0.823442 | 1.382292e-53 | -8.615850e-47 |
| Msa0315660 | Msa0479480 | 0.820360 | 7.147801e-53 | -8.615850e-47 |
| Msa0328870 | Msa0479480 | 0.817294 | 3.553446e-52 | -8.615850e-47 |
| Msa0340830 | Msa0479480 | -0.808532 | 2.957123e-50 | -8.615850e-47 |
| Msa0342220 | Msa0479480 | 0.819940 | 8.920561e-53 | -8.615850e-47 |
| Msa0349930 | Msa0479480 | 0.828279 | 9.821808e-55 | -8.615850e-47 |
| Msa0364030 | Msa0479480 | -0.804471 | 2.126456e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479480 | MtrunA17_Chr3g0142211 | 90.601 | 766 | 23 | 8 | 1 | 739 | 1 | 744 | 0.0 | 1380 |
| Msa0479480 | MtrunA17_Chr8g0372371 | 61.194 | 67 | 26 | 0 | 673 | 739 | 566 | 632 | 5.54e-19 | 92.0 |
| Msa0479480 | MtrunA17_Chr8g0372371 | 38.931 | 131 | 67 | 3 | 1 | 121 | 1 | 128 | 1.98e-18 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479480 | AT3G54350.3 | 32.960 | 446 | 210 | 17 | 311 | 739 | 219 | 592 | 5.63e-40 | 157 |
| Msa0479480 | AT3G54350.3 | 38.333 | 180 | 81 | 4 | 1 | 177 | 1 | 153 | 5.23e-30 | 127 |
| Msa0479480 | AT3G54350.5 | 32.960 | 446 | 210 | 17 | 311 | 739 | 219 | 592 | 5.63e-40 | 157 |
| Msa0479480 | AT3G54350.5 | 38.333 | 180 | 81 | 4 | 1 | 177 | 1 | 153 | 5.23e-30 | 127 |
| Msa0479480 | AT3G54350.4 | 32.960 | 446 | 210 | 17 | 311 | 739 | 219 | 592 | 5.63e-40 | 157 |
| Msa0479480 | AT3G54350.4 | 38.333 | 180 | 81 | 4 | 1 | 177 | 1 | 153 | 5.23e-30 | 127 |
| Msa0479480 | AT3G54350.1 | 32.960 | 446 | 210 | 17 | 311 | 739 | 219 | 592 | 5.63e-40 | 157 |
| Msa0479480 | AT3G54350.1 | 38.333 | 180 | 81 | 4 | 1 | 177 | 1 | 153 | 5.23e-30 | 127 |
| Msa0479480 | AT3G54350.2 | 32.960 | 446 | 210 | 17 | 311 | 739 | 219 | 592 | 5.63e-40 | 157 |
| Msa0479480 | AT3G54350.2 | 38.333 | 180 | 81 | 4 | 1 | 177 | 1 | 153 | 5.23e-30 | 127 |
| Msa0479480 | AT1G75530.1 | 59.722 | 72 | 28 | 1 | 668 | 739 | 378 | 448 | 4.55e-18 | 89.0 |
| Msa0479480 | AT1G75530.1 | 38.261 | 115 | 57 | 2 | 14 | 128 | 5 | 105 | 9.92e-16 | 81.3 |
Find 159 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCAAAGTTCTTCAAAAT+TGG | 0.145974 | 3_3:-84496724 | Msa0479480:CDS |
| CTACATCCCGTTCCTGTTTC+AGG | 0.165368 | 3_3:+84495027 | None:intergenic |
| AACTCTACTTCAGCCATTTC+AGG | 0.207699 | 3_3:+84495845 | None:intergenic |
| AGTGGGGTCCGCAGATGTTC+TGG | 0.213381 | 3_3:-84494967 | Msa0479480:CDS |
| AATGATAATTATGTGGTAAA+TGG | 0.230760 | 3_3:-84496562 | Msa0479480:CDS |
| GAAGAGAGAGAAAGGGGTTT+TGG | 0.255371 | 3_3:-84497586 | Msa0479480:five_prime_UTR |
| TTAAGTAAAACCCTCGTTTC+CGG | 0.262650 | 3_3:-84497642 | Msa0479480:five_prime_UTR |
| CCTCCTCAGGTATATTGTTT+TGG | 0.267136 | 3_3:+84496362 | None:intergenic |
| CTTCCTACAGGTACTTGATA+TGG | 0.281187 | 3_3:-84494760 | Msa0479480:intron |
| CCATCATCTGGTAATGATTA+TGG | 0.283144 | 3_3:-84495425 | Msa0479480:CDS |
| GCCTTTGATGCACATGTTAA+AGG | 0.285501 | 3_3:-84495725 | Msa0479480:intron |
| AGATGATGGAACTGGTATAT+TGG | 0.287606 | 3_3:+84495439 | None:intergenic |
| GTTATCACTTCCTGACATTC+AGG | 0.301168 | 3_3:-84496107 | Msa0479480:CDS |
| ACGGGAGCCCATTGCCTTCC+AGG | 0.307560 | 3_3:-84495320 | Msa0479480:CDS |
| TTACTAAACTCTCCAATTGA+TGG | 0.323717 | 3_3:-84495884 | Msa0479480:intron |
| TGCTTGCGAGGATGGTTATC+TGG | 0.327115 | 3_3:-84496020 | Msa0479480:CDS |
| ACAACTCCGTTAATTAGTTC+AGG | 0.344801 | 3_3:+84495578 | None:intergenic |
| TCATCATTGGATGGAACTTC+CGG | 0.350267 | 3_3:+84495530 | None:intergenic |
| GATGATGGAACTGGTATATT+GGG | 0.354956 | 3_3:+84495440 | None:intergenic |
| AACTCGGAGCACAAATTTGC+AGG | 0.358484 | 3_3:+84496193 | None:intergenic |
| GACGCCTCTTCCTCTATAAC+AGG | 0.361911 | 3_3:-84496772 | Msa0479480:CDS |
| TTGCAGGGTCATTGTTGATT+TGG | 0.364365 | 3_3:+84496209 | None:intergenic |
| CTATGACCCTATCGTATCTA+AGG | 0.368053 | 3_3:-84496794 | Msa0479480:CDS |
| AGCAGCTGATTCGGATGAAC+AGG | 0.372820 | 3_3:+84495469 | None:intergenic |
| GCCTCTACATCAGAATAATA+AGG | 0.375340 | 3_3:+84494873 | None:intergenic |
| AATGGAACTGCCGAGGAATT+CGG | 0.383170 | 3_3:-84496307 | Msa0479480:CDS |
| GGCTATCATAAGGCTGGAGC+AGG | 0.390120 | 3_3:-84493915 | Msa0479480:CDS |
| CAATTTCCTGAACTAATTAA+CGG | 0.393033 | 3_3:-84495584 | Msa0479480:CDS |
| TGTTTCAGGCTAGAACCATT+AGG | 0.394864 | 3_3:+84495041 | None:intergenic |
| CGGATGAACAGGAAATTGTT+GGG | 0.395596 | 3_3:+84495480 | None:intergenic |
| AGTGAAGTTTAAGAGTGAAT+TGG | 0.399488 | 3_3:+84495988 | None:intergenic |
| CAAGACCAACGTTGAGGTTG+AGG | 0.402737 | 3_3:-84497477 | Msa0479480:intron |
| CTGAGGCCATTTCCGAGTGC+TGG | 0.404415 | 3_3:+84495077 | None:intergenic |
| TGCCTTCCAGGACCTGTTTG+TGG | 0.404574 | 3_3:-84495308 | Msa0479480:CDS |
| AGAAATCATGGCCAACCTAA+TGG | 0.412077 | 3_3:-84495056 | Msa0479480:CDS |
| CTGAAGCGGAAGCTGCCATT+TGG | 0.420213 | 3_3:+84495618 | None:intergenic |
| TCGGATGAACAGGAAATTGT+TGG | 0.429271 | 3_3:+84495479 | None:intergenic |
| GTGGGGTCCGCAGATGTTCT+GGG | 0.429944 | 3_3:-84494966 | Msa0479480:CDS |
| TGAATTTGAGGTTCCTCCTC+AGG | 0.430219 | 3_3:+84496349 | None:intergenic |
| ATGGATTCTGTTGGAAAAGA+TGG | 0.431255 | 3_3:-84495944 | Msa0479480:CDS |
| AATTCACTCTTAAACTTCAC+TGG | 0.433717 | 3_3:-84495986 | Msa0479480:CDS |
| CAGGTTTCTTCTCAGACAAC+GGG | 0.434080 | 3_3:-84495338 | Msa0479480:CDS |
| TTTGCAGAATGGAGCTTCCT+TGG | 0.435277 | 3_3:-84496896 | Msa0479480:intron |
| TAATGGTTCTAGCCTGAAAC+AGG | 0.435818 | 3_3:-84495039 | Msa0479480:CDS |
| AAGAAACCAGCACTCGGAAA+TGG | 0.436278 | 3_3:-84495083 | Msa0479480:CDS |
| CTGTAAGTGAAGAGAGAGAA+AGG | 0.439980 | 3_3:-84497594 | Msa0479480:five_prime_UTR |
| TCATATAAATCATGATCATC+AGG | 0.445771 | 3_3:+84494729 | None:intergenic |
| TGATCTGAACAACCATCAAT+TGG | 0.446899 | 3_3:+84495872 | None:intergenic |
| ACCGGCATGTCCTGAATGTC+AGG | 0.447641 | 3_3:+84496097 | None:intergenic |
| CATCATTGGATGGAACTTCC+GGG | 0.449026 | 3_3:+84495531 | None:intergenic |
| TCCTTGGAAGCAATTGCAAA+AGG | 0.451436 | 3_3:-84496880 | Msa0479480:CDS |
| TGTAAGTGAAGAGAGAGAAA+GGG | 0.451626 | 3_3:-84497593 | Msa0479480:five_prime_UTR |
| AACACAATGTCACAATCTAA+TGG | 0.456391 | 3_3:-84495668 | Msa0479480:CDS |
| ACATTCAGGACATGCCGGTC+TGG | 0.456435 | 3_3:-84496093 | Msa0479480:CDS |
| ATTGTTTCCACCTAGGTCAC+TGG | 0.459702 | 3_3:+84495214 | None:intergenic |
| GATTCTATTGCTTGCGAGGA+TGG | 0.460549 | 3_3:-84496028 | Msa0479480:CDS |
| AATATACCAGTTCCATCATC+TGG | 0.465195 | 3_3:-84495437 | Msa0479480:CDS |
| TTAATTAGTTCAGGAAATTG+AGG | 0.467308 | 3_3:+84495587 | None:intergenic |
| AATCATGATCCGTCACACTA+TGG | 0.467332 | 3_3:-84496481 | Msa0479480:CDS |
| ACATTATCCTCATGAATTTG+AGG | 0.475097 | 3_3:+84496337 | None:intergenic |
| GGGTAGGAAAACATCATCAT+TGG | 0.478904 | 3_3:+84495517 | None:intergenic |
| TTGAGGAAATACAAGAAAGA+TGG | 0.479331 | 3_3:-84496828 | Msa0479480:CDS |
| TTGAAGAACTTTGATGGGAG+AGG | 0.480913 | 3_3:+84496730 | None:intergenic |
| TATTGAATCGCCGAATTCCT+CGG | 0.484243 | 3_3:+84496297 | None:intergenic |
| CCATAATCATTACCAGATGA+TGG | 0.485021 | 3_3:+84495425 | None:intergenic |
| AACTAGAAAATTGTAGTCCA+TGG | 0.490147 | 3_3:+84496594 | None:intergenic |
| AAACTAAGCGGGCTATCATA+AGG | 0.490452 | 3_3:-84493925 | Msa0479480:CDS |
| TTCTTATATGCAGAGAGCTA+TGG | 0.490508 | 3_3:-84493885 | Msa0479480:CDS |
| AACAGGTCCTGGAAGGCAAT+GGG | 0.491562 | 3_3:+84495313 | None:intergenic |
| GAAGCTGCCATTTGGAACTC+TGG | 0.492070 | 3_3:+84495626 | None:intergenic |
| TTCAGATCAGATACCTGAAA+TGG | 0.493723 | 3_3:-84495858 | Msa0479480:intron |
| TCTGTTGGAAAAGATGGGAT+TGG | 0.498372 | 3_3:-84495938 | Msa0479480:CDS |
| TTAGAACCACAAACAGGTCC+TGG | 0.499033 | 3_3:+84495302 | None:intergenic |
| TTCTAGCCTGAAACAGGAAC+GGG | 0.499074 | 3_3:-84495033 | Msa0479480:CDS |
| CTATTTCTGATGGATTCTGT+TGG | 0.501811 | 3_3:-84495953 | Msa0479480:CDS |
| TAGAGATATGCAAACTTCCA+TGG | 0.503196 | 3_3:-84496611 | Msa0479480:CDS |
| TTGCATCATTGTTTCCACCT+AGG | 0.504103 | 3_3:+84495207 | None:intergenic |
| AGATGGTGGTTTACAGTGAA+AGG | 0.504710 | 3_3:-84494938 | Msa0479480:CDS |
| GCCTGAAAACTGTGCACTCG+AGG | 0.506036 | 3_3:-84496527 | Msa0479480:CDS |
| TTCAGAAAATGATAATTATG+TGG | 0.507506 | 3_3:-84496569 | Msa0479480:CDS |
| ACCTTTAACATGTGCATCAA+AGG | 0.508533 | 3_3:+84495724 | None:intergenic |
| GTAAGTGAAGAGAGAGAAAG+GGG | 0.509180 | 3_3:-84497592 | Msa0479480:five_prime_UTR |
| ATGCTCGAAACCTGTTATAG+AGG | 0.510920 | 3_3:+84496762 | None:intergenic |
| TCATTACCAGATGATGGAAC+TGG | 0.511561 | 3_3:+84495431 | None:intergenic |
| TCAGGTTTCTTCTCAGACAA+CGG | 0.515527 | 3_3:-84495339 | Msa0479480:intron |
| TGTTCTTCTGTTCTCCAGAC+CGG | 0.516912 | 3_3:+84496079 | None:intergenic |
| GGAAATGGCCTCAGAAATCA+TGG | 0.518899 | 3_3:-84495068 | Msa0479480:CDS |
| TTATTCTGATGTAGAGGCCA+TGG | 0.519752 | 3_3:-84494868 | Msa0479480:intron |
| TTTACGAAGCTAACATCGAC+AGG | 0.520007 | 3_3:+84495140 | None:intergenic |
| GGTCTGGAGAACAGAAGAAC+AGG | 0.520859 | 3_3:-84496077 | Msa0479480:CDS |
| AAACAGGTCCTGGAAGGCAA+TGG | 0.521092 | 3_3:+84495312 | None:intergenic |
| TTCTTCTCCTTGGACTTCCG+AGG | 0.522656 | 3_3:-84497513 | Msa0479480:CDS |
| GAGGATAATGTGCTTCTGAA+TGG | 0.524333 | 3_3:-84496325 | Msa0479480:CDS |
| GACTGAAACAGAGCTGTTAG+CGG | 0.526338 | 3_3:-84495747 | Msa0479480:CDS |
| TGAGGAAGAGCTATTTCTGA+TGG | 0.528232 | 3_3:-84495963 | Msa0479480:CDS |
| GATTTATATGATAATGAAGA+AGG | 0.531518 | 3_3:-84494717 | Msa0479480:intron |
| TTGAGGATCTTTAGCTGAAG+CGG | 0.532760 | 3_3:+84495604 | None:intergenic |
| TAAGCGGGCTATCATAAGGC+TGG | 0.532916 | 3_3:-84493921 | Msa0479480:CDS |
| TATGGCTTCACATGGAGCAT+TGG | 0.533692 | 3_3:-84493867 | Msa0479480:CDS |
| CATATAATCTTCATCAAACT+CGG | 0.539231 | 3_3:+84496177 | None:intergenic |
| ATTATTGCTTCCAGTGACCT+AGG | 0.539814 | 3_3:-84495224 | Msa0479480:CDS |
| TCCTTATTATTCTGATGTAG+AGG | 0.540004 | 3_3:-84494874 | Msa0479480:CDS |
| TGGAAGTTTGCATATCTCTA+CGG | 0.543472 | 3_3:+84496614 | None:intergenic |
| TCCTGACATTCAGGACATGC+CGG | 0.548782 | 3_3:-84496098 | Msa0479480:CDS |
| TCAGTTGCAACATGCTGAAG+TGG | 0.548794 | 3_3:-84494985 | Msa0479480:CDS |
| GAAACCTGTTATAGAGGAAG+AGG | 0.551494 | 3_3:+84496768 | None:intergenic |
| CAGGATAATATTCCATGTGA+TGG | 0.557447 | 3_3:-84496058 | Msa0479480:CDS |
| GAATTCCCACACTCTAACTC+AGG | 0.557612 | 3_3:+84496145 | None:intergenic |
| ATTGGTAAATCTTATTATGA+CGG | 0.558102 | 3_3:-84495920 | Msa0479480:CDS |
| CAGTTGCAACATGCTGAAGT+GGG | 0.561922 | 3_3:-84494984 | Msa0479480:CDS |
| TGCTCTACATGCAAGTCCTA+AGG | 0.563413 | 3_3:-84495168 | Msa0479480:CDS |
| TCAGGCTAGAACCATTAGGT+TGG | 0.564102 | 3_3:+84495045 | None:intergenic |
| TGGATTCTGTTGGAAAAGAT+GGG | 0.564113 | 3_3:-84495943 | Msa0479480:CDS |
| GATTCACCTGAGTTAGAGTG+TGG | 0.567474 | 3_3:-84496151 | Msa0479480:CDS |
| CAGAGAGCTATGGCTTCACA+TGG | 0.568900 | 3_3:-84493875 | Msa0479480:CDS |
| TGTTCTGGGGTCTGAGATGG+TGG | 0.569785 | 3_3:-84494952 | Msa0479480:CDS |
| GGAGATAGAGCTAGCAGGAG+AGG | 0.577575 | 3_3:-84495404 | Msa0479480:CDS |
| AAAAGATTCTATTGCTTGCG+AGG | 0.580675 | 3_3:-84496032 | Msa0479480:CDS |
| CCTGAAAACTGTGCACTCGA+GGG | 0.581553 | 3_3:-84496526 | Msa0479480:CDS |
| CTTGAGCAAAAGATCATCCT+CGG | 0.583382 | 3_3:+84497496 | None:intergenic |
| TGTAATAAATACTGAAGACC+CGG | 0.584235 | 3_3:-84495549 | Msa0479480:CDS |
| ACAGGTACTTGATATGGACT+TGG | 0.587590 | 3_3:-84494754 | Msa0479480:intron |
| GGATGAACAGGAAATTGTTG+GGG | 0.588114 | 3_3:+84495481 | None:intergenic |
| TAGGTTGGCCATGATTTCTG+AGG | 0.588324 | 3_3:+84495060 | None:intergenic |
| AGATGTTCTGGGGTCTGAGA+TGG | 0.588696 | 3_3:-84494955 | Msa0479480:CDS |
| AGAGTGAGAGAATGCGACGC+CGG | 0.590451 | 3_3:+84497623 | None:intergenic |
| AGGAAAACATCATCATTGGA+TGG | 0.590849 | 3_3:+84495521 | None:intergenic |
| GCTATCATAAGGCTGGAGCA+GGG | 0.592080 | 3_3:-84493914 | Msa0479480:CDS |
| AGAATGCGACGCCGGAAACG+AGG | 0.598305 | 3_3:+84497631 | None:intergenic |
| AGATCATCCTCGGAAGTCCA+AGG | 0.600476 | 3_3:+84497506 | None:intergenic |
| CCAAAACAATATACCTGAGG+AGG | 0.602011 | 3_3:-84496362 | Msa0479480:CDS |
| AGGCGTCCTTAGATACGATA+GGG | 0.606556 | 3_3:+84496788 | None:intergenic |
| ATCAACACGAAGAAACTAAG+CGG | 0.612075 | 3_3:-84493937 | Msa0479480:CDS |
| GGGGAGGCTCATTAAAGGGT+AGG | 0.614820 | 3_3:+84495501 | None:intergenic |
| TCTGGAAGACCATAGTGTGA+CGG | 0.616832 | 3_3:+84496472 | None:intergenic |
| ACTCTTAAACTTCACTGGTG+AGG | 0.618343 | 3_3:-84495981 | Msa0479480:CDS |
| ATTATGGAGATAGAGCTAGC+AGG | 0.621915 | 3_3:-84495409 | Msa0479480:CDS |
| ACAGAAGTAGACGACAATGC+AGG | 0.622677 | 3_3:-84495773 | Msa0479480:CDS |
| GTTCTAGCCTGAAACAGGAA+CGG | 0.624239 | 3_3:-84495034 | Msa0479480:CDS |
| GAATGCGACGCCGGAAACGA+GGG | 0.624674 | 3_3:+84497632 | None:intergenic |
| AACCACAAACAGGTCCTGGA+AGG | 0.625069 | 3_3:+84495306 | None:intergenic |
| TCAACACGAAGAAACTAAGC+GGG | 0.626611 | 3_3:-84493936 | Msa0479480:CDS |
| TGGGGTCCGCAGATGTTCTG+GGG | 0.628917 | 3_3:-84494965 | Msa0479480:CDS |
| GAGGCGTCCTTAGATACGAT+AGG | 0.630079 | 3_3:+84496787 | None:intergenic |
| TTTGCTCAAGACCAACGTTG+AGG | 0.631802 | 3_3:-84497483 | Msa0479480:CDS |
| ATTCACCTGAGTTAGAGTGT+GGG | 0.634516 | 3_3:-84496150 | Msa0479480:CDS |
| AATGTCACAATCTAATGGCG+TGG | 0.640479 | 3_3:-84495663 | Msa0479480:CDS |
| CTCAGACCCCAGAACATCTG+CGG | 0.641623 | 3_3:+84494959 | None:intergenic |
| ACTCGGAGCACAAATTTGCA+GGG | 0.643928 | 3_3:+84496194 | None:intergenic |
| TCACATAAGAAACCAGCACT+CGG | 0.662353 | 3_3:-84495089 | Msa0479480:intron |
| ATAAACCTCAACCTCAACGT+TGG | 0.672629 | 3_3:+84497472 | None:intergenic |
| GCTTCTGAATGGAACTGCCG+AGG | 0.673898 | 3_3:-84496314 | Msa0479480:CDS |
| AGTTGCAACATGCTGAAGTG+GGG | 0.674634 | 3_3:-84494983 | Msa0479480:CDS |
| GGAGGAACCTCAAATTCATG+AGG | 0.676617 | 3_3:-84496344 | Msa0479480:CDS |
| TTACAGTGAAAGGTTAGACG+AGG | 0.692509 | 3_3:-84494928 | Msa0479480:CDS |
| ATTGCTTCCAGTGACCTAGG+TGG | 0.693297 | 3_3:-84495221 | Msa0479480:CDS |
| GATGAACAGGAAATTGTTGG+GGG | 0.710491 | 3_3:+84495482 | None:intergenic |
| GGACCAAAACAATATACCTG+AGG | 0.722831 | 3_3:-84496365 | Msa0479480:CDS |
| TCTGTGCGACATGAAACAGA+CGG | 0.723189 | 3_3:+84495791 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAGTATTAAAAAATGAAA+TGG | + | chr3_3:84494256-84494275 | None:intergenic | 15.0% |
| !! | CTAGATATAGAAAAATTTAT+TGG | - | chr3_3:84495225-84495244 | Msa0479480:CDS | 15.0% |
| !! | ATAAATATAAACGTACTATA+AGG | - | chr3_3:84497089-84497108 | Msa0479480:intron | 15.0% |
| !! | TGAAATGAATGAAATTGAAA+AGG | + | chr3_3:84494094-84494113 | None:intergenic | 20.0% |
| !!! | TTTTTATGTGTGTTTCAATT+TGG | - | chr3_3:84494436-84494455 | Msa0479480:intron | 20.0% |
| !! | TTCAGAAAATGATAATTATG+TGG | - | chr3_3:84494927-84494946 | Msa0479480:CDS | 20.0% |
| !! | AATGATAATTATGTGGTAAA+TGG | - | chr3_3:84494934-84494953 | Msa0479480:CDS | 20.0% |
| !!! | AATTTTATGGATGTTGATAT+TGG | - | chr3_3:84495048-84495067 | Msa0479480:CDS | 20.0% |
| !! | ATTGGTAAATCTTATTATGA+CGG | - | chr3_3:84495576-84495595 | Msa0479480:CDS | 20.0% |
| !!! | GATTTATATGATAATGAAGA+AGG | - | chr3_3:84496779-84496798 | Msa0479480:CDS | 20.0% |
| !!! | CCAAATTTTTTAGCAAAATA+AGG | + | chr3_3:84497050-84497069 | None:intergenic | 20.0% |
| !!! | CCTTATTTTGCTAAAAAATT+TGG | - | chr3_3:84497047-84497066 | Msa0479480:intron | 20.0% |
| !! | AAATATGATAAAACAGATTC+TGG | + | chr3_3:84497290-84497309 | None:intergenic | 20.0% |
| !! | CAAAAGAAACTAAATTATGT+TGG | + | chr3_3:84497463-84497482 | None:intergenic | 20.0% |
| !!! | ATTTAGTTTCTTTTGTGATT+CGG | - | chr3_3:84497468-84497487 | Msa0479480:intron | 20.0% |
| ! | ATGAATGAGTAAATTAGTTG+AGG | + | chr3_3:84494128-84494147 | None:intergenic | 25.0% |
| !! | TTTTAACACATTGTAGTCTA+AGG | - | chr3_3:84494400-84494419 | Msa0479480:intron | 25.0% |
| !!! | TTCTCGAAAATATAGTTTTG+AGG | - | chr3_3:84494651-84494670 | Msa0479480:intron | 25.0% |
| !!! | CAATTTTGAAGAACTTTGAT+GGG | + | chr3_3:84494774-84494793 | None:intergenic | 25.0% |
| !! | TCAACATCCATAAAATTTTC+TGG | + | chr3_3:84495045-84495064 | None:intergenic | 25.0% |
| ! | CATATAATCTTCATCAAACT+CGG | + | chr3_3:84495322-84495341 | None:intergenic | 25.0% |
| ! | TTAATTAGTTCAGGAAATTG+AGG | + | chr3_3:84495912-84495931 | None:intergenic | 25.0% |
| ! | CAATTTCCTGAACTAATTAA+CGG | - | chr3_3:84495912-84495931 | Msa0479480:CDS | 25.0% |
| !!! | TTTATTTTAGAACCACAAAC+AGG | + | chr3_3:84496203-84496222 | None:intergenic | 25.0% |
| ! | AATAAGTCAGAAAATTGCAA+AGG | + | chr3_3:84496708-84496727 | None:intergenic | 25.0% |
| ! | TCATATAAATCATGATCATC+AGG | + | chr3_3:84496770-84496789 | None:intergenic | 25.0% |
| !!! | AAGAAGGTATTACTATTATG+TGG | - | chr3_3:84496795-84496814 | Msa0479480:CDS | 25.0% |
| ! | AATAGAAATGATCTTCAGTT+AGG | + | chr3_3:84496939-84496958 | None:intergenic | 25.0% |
| ! | AATATAAACGTACTATAAGG+AGG | - | chr3_3:84497092-84497111 | Msa0479480:intron | 25.0% |
| ! | ATATAAACGTACTATAAGGA+GGG | - | chr3_3:84497093-84497112 | Msa0479480:intron | 25.0% |
| ! | TACTTTAATACTCTTTCAGT+TGG | - | chr3_3:84497151-84497170 | Msa0479480:intron | 25.0% |
| TCGAAAATGAAAGAGAGAAA+GGG | + | chr3_3:84494050-84494069 | None:intergenic | 30.0% | |
| ATCGAAAATGAAAGAGAGAA+AGG | + | chr3_3:84494051-84494070 | None:intergenic | 30.0% | |
| !! | TGCTCTAACATTGTTTTTCT+AGG | - | chr3_3:84494167-84494186 | Msa0479480:intron | 30.0% |
| TTTAAACCAGAATCCTGAAA+TGG | + | chr3_3:84494559-84494578 | None:intergenic | 30.0% | |
| ! | CAAGCTTTATATTTGCAGAA+TGG | - | chr3_3:84494589-84494608 | Msa0479480:intron | 30.0% |
| TTGAGGAAATACAAGAAAGA+TGG | - | chr3_3:84494668-84494687 | Msa0479480:intron | 30.0% | |
| !! | CCAATTTTGAAGAACTTTGA+TGG | + | chr3_3:84494775-84494794 | None:intergenic | 30.0% |
| CCATCAAAGTTCTTCAAAAT+TGG | - | chr3_3:84494772-84494791 | Msa0479480:intron | 30.0% | |
| AACTAGAAAATTGTAGTCCA+TGG | + | chr3_3:84494905-84494924 | None:intergenic | 30.0% | |
| ! | TGGTCTTCCAGAAAATTTTA+TGG | - | chr3_3:84495035-84495054 | Msa0479480:CDS | 30.0% |
| ACATTATCCTCATGAATTTG+AGG | + | chr3_3:84495162-84495181 | None:intergenic | 30.0% | |
| AGTGAAGTTTAAGAGTGAAT+TGG | + | chr3_3:84495511-84495530 | None:intergenic | 30.0% | |
| AATTCACTCTTAAACTTCAC+TGG | - | chr3_3:84495510-84495529 | Msa0479480:CDS | 30.0% | |
| TTACTAAACTCTCCAATTGA+TGG | - | chr3_3:84495612-84495631 | Msa0479480:CDS | 30.0% | |
| AACACAATGTCACAATCTAA+TGG | - | chr3_3:84495828-84495847 | Msa0479480:CDS | 30.0% | |
| TGTAATAAATACTGAAGACC+CGG | - | chr3_3:84495947-84495966 | Msa0479480:CDS | 30.0% | |
| !! | TGCAACTGATTATTTTCAAG+TGG | + | chr3_3:84496500-84496519 | None:intergenic | 30.0% |
| TCCTTATTATTCTGATGTAG+AGG | - | chr3_3:84496622-84496641 | Msa0479480:CDS | 30.0% | |
| TATAAACGTACTATAAGGAG+GGG | - | chr3_3:84497094-84497113 | Msa0479480:intron | 30.0% | |
| ! | ACGAATTTTTGAATTCCAAG+AGG | - | chr3_3:84497122-84497141 | Msa0479480:intron | 30.0% |
| ! | AGATTCAACTTTTGGATTTG+TGG | - | chr3_3:84497239-84497258 | Msa0479480:intron | 30.0% |
| ATGTTTCAGAATTAACTAGC+AGG | + | chr3_3:84497322-84497341 | None:intergenic | 30.0% | |
| AAGCAAAAACATTCACACAA+AGG | + | chr3_3:84497381-84497400 | None:intergenic | 30.0% | |
| TGTAAGTGAAGAGAGAGAAA+GGG | - | chr3_3:84493903-84493922 | Msa0479480:CDS | 35.0% | |
| TATCTTCTTCTTCTTCTCCT+TGG | - | chr3_3:84493973-84493992 | Msa0479480:intron | 35.0% | |
| TTTAATACTATCGTCGATCG+CGG | - | chr3_3:84494264-84494283 | Msa0479480:intron | 35.0% | |
| !!! | TAGTCTAAGGTTGCTTTTCT+AGG | - | chr3_3:84494413-84494432 | Msa0479480:intron | 35.0% |
| TGTGTGTTTCAATTTGGTTG+TGG | - | chr3_3:84494442-84494461 | Msa0479480:intron | 35.0% | |
| TGGAAGTTTGCATATCTCTA+CGG | + | chr3_3:84494885-84494904 | None:intergenic | 35.0% | |
| TAGAGATATGCAAACTTCCA+TGG | - | chr3_3:84494885-84494904 | Msa0479480:CDS | 35.0% | |
| ! | ACTTGAAGAGAATTTTCCCA+TGG | - | chr3_3:84495110-84495129 | Msa0479480:intron | 35.0% |
| !!! | GGTATATTGTTTTGGTCCAT+GGG | + | chr3_3:84495129-84495148 | None:intergenic | 35.0% |
| !!! | AGGTATATTGTTTTGGTCCA+TGG | + | chr3_3:84495130-84495149 | None:intergenic | 35.0% |
| CAGGATAATATTCCATGTGA+TGG | - | chr3_3:84495438-84495457 | Msa0479480:CDS | 35.0% | |
| ! | GAATCTTTTGAACCATCACA+TGG | + | chr3_3:84495453-84495472 | None:intergenic | 35.0% |
| AAAAGATTCTATTGCTTGCG+AGG | - | chr3_3:84495464-84495483 | Msa0479480:CDS | 35.0% | |
| !! | CTATTTCTGATGGATTCTGT+TGG | - | chr3_3:84495543-84495562 | Msa0479480:CDS | 35.0% |
| ATGGATTCTGTTGGAAAAGA+TGG | - | chr3_3:84495552-84495571 | Msa0479480:CDS | 35.0% | |
| TGGATTCTGTTGGAAAAGAT+GGG | - | chr3_3:84495553-84495572 | Msa0479480:CDS | 35.0% | |
| TGATCTGAACAACCATCAAT+TGG | + | chr3_3:84495627-84495646 | None:intergenic | 35.0% | |
| TTCAGATCAGATACCTGAAA+TGG | - | chr3_3:84495638-84495657 | Msa0479480:CDS | 35.0% | |
| ! | ATTTTTAACATCTTCGCGTG+GGG | + | chr3_3:84495685-84495704 | None:intergenic | 35.0% |
| ! | GATTTTTAACATCTTCGCGT+GGG | + | chr3_3:84495686-84495705 | None:intergenic | 35.0% |
| ACCTTTAACATGTGCATCAA+AGG | + | chr3_3:84495775-84495794 | None:intergenic | 35.0% | |
| TCAAAAACCAGAGTTCCAAA+TGG | - | chr3_3:84495863-84495882 | Msa0479480:intron | 35.0% | |
| ACAACTCCGTTAATTAGTTC+AGG | + | chr3_3:84495921-84495940 | None:intergenic | 35.0% | |
| AGGAAAACATCATCATTGGA+TGG | + | chr3_3:84495978-84495997 | None:intergenic | 35.0% | |
| !! | GATGATGGAACTGGTATATT+GGG | + | chr3_3:84496059-84496078 | None:intergenic | 35.0% |
| !! | AGATGATGGAACTGGTATAT+TGG | + | chr3_3:84496060-84496079 | None:intergenic | 35.0% |
| AATATACCAGTTCCATCATC+TGG | - | chr3_3:84496059-84496078 | Msa0479480:CDS | 35.0% | |
| CCATAATCATTACCAGATGA+TGG | + | chr3_3:84496074-84496093 | None:intergenic | 35.0% | |
| ! | CCATCATCTGGTAATGATTA+TGG | - | chr3_3:84496071-84496090 | Msa0479480:CDS | 35.0% |
| GCCTCTACATCAGAATAATA+AGG | + | chr3_3:84496626-84496645 | None:intergenic | 35.0% | |
| TATTCATGATTCCTTCCTAC+AGG | - | chr3_3:84496724-84496743 | Msa0479480:CDS | 35.0% | |
| ! | TGCATTTTTATGCTACCTCA+TGG | - | chr3_3:84496965-84496984 | Msa0479480:intron | 35.0% |
| TTTATGCTACCTCATGGTAT+TGG | - | chr3_3:84496971-84496990 | Msa0479480:intron | 35.0% | |
| ATAAACGTACTATAAGGAGG+GGG | - | chr3_3:84497095-84497114 | Msa0479480:intron | 35.0% | |
| ATTAAAGTAGTGCAACCTCT+TGG | + | chr3_3:84497140-84497159 | None:intergenic | 35.0% | |
| AACATGCTATGTTGTTGTCA+TGG | - | chr3_3:84497214-84497233 | Msa0479480:intron | 35.0% | |
| ! | TCATGGCTAGATTCAACTTT+TGG | - | chr3_3:84497231-84497250 | Msa0479480:intron | 35.0% |
| ! | TTCAACTTTTGGATTTGTGG+TGG | - | chr3_3:84497242-84497261 | Msa0479480:intron | 35.0% |
| ATCAACACGAAGAAACTAAG+CGG | - | chr3_3:84497559-84497578 | Msa0479480:exon | 35.0% | |
| TTCTTATATGCAGAGAGCTA+TGG | - | chr3_3:84497611-84497630 | Msa0479480:five_prime_UTR | 35.0% | |
| CTGTAAGTGAAGAGAGAGAA+AGG | - | chr3_3:84493902-84493921 | Msa0479480:CDS | 40.0% | |
| GTAAGTGAAGAGAGAGAAAG+GGG | - | chr3_3:84493904-84493923 | Msa0479480:CDS | 40.0% | |
| !!! | AGAGAAAGGGGTTTTGGTTT+TGG | - | chr3_3:84493916-84493935 | Msa0479480:CDS | 40.0% |
| !!! | GAGAAAGGGGTTTTGGTTTT+GGG | - | chr3_3:84493917-84493936 | Msa0479480:CDS | 40.0% |
| !!! | AGAAAGGGGTTTTGGTTTTG+GGG | - | chr3_3:84493918-84493937 | Msa0479480:CDS | 40.0% |
| CTTGAGCAAAAGATCATCCT+CGG | + | chr3_3:84494003-84494022 | None:intergenic | 40.0% | |
| ATAAACCTCAACCTCAACGT+TGG | + | chr3_3:84494027-84494046 | None:intergenic | 40.0% | |
| CAATTTGGTTGTGGAATGTC+CGG | - | chr3_3:84494451-84494470 | Msa0479480:intron | 40.0% | |
| !! | TAGAGTTCGTGTTGTTTGTC+CGG | + | chr3_3:84494473-84494492 | None:intergenic | 40.0% |
| AGAGACAAGACAACCATTTC+AGG | - | chr3_3:84494543-84494562 | Msa0479480:intron | 40.0% | |
| AGACAACCATTTCAGGATTC+TGG | - | chr3_3:84494550-84494569 | Msa0479480:intron | 40.0% | |
| TCCTTGGAAGCAATTGCAAA+AGG | - | chr3_3:84494616-84494635 | Msa0479480:intron | 40.0% | |
| CTATGACCCTATCGTATCTA+AGG | - | chr3_3:84494702-84494721 | Msa0479480:intron | 40.0% | |
| GAAACCTGTTATAGAGGAAG+AGG | + | chr3_3:84494731-84494750 | None:intergenic | 40.0% | |
| ATGCTCGAAACCTGTTATAG+AGG | + | chr3_3:84494737-84494756 | None:intergenic | 40.0% | |
| TTGAAGAACTTTGATGGGAG+AGG | + | chr3_3:84494769-84494788 | None:intergenic | 40.0% | |
| AATCATGATCCGTCACACTA+TGG | - | chr3_3:84495015-84495034 | Msa0479480:CDS | 40.0% | |
| GGACCAAAACAATATACCTG+AGG | - | chr3_3:84495131-84495150 | Msa0479480:CDS | 40.0% | |
| ! | CCTCCTCAGGTATATTGTTT+TGG | + | chr3_3:84495137-84495156 | None:intergenic | 40.0% |
| CCAAAACAATATACCTGAGG+AGG | - | chr3_3:84495134-84495153 | Msa0479480:CDS | 40.0% | |
| GAGGATAATGTGCTTCTGAA+TGG | - | chr3_3:84495171-84495190 | Msa0479480:CDS | 40.0% | |
| TATTGAATCGCCGAATTCCT+CGG | + | chr3_3:84495202-84495221 | None:intergenic | 40.0% | |
| ! | TTGCAGGGTCATTGTTGATT+TGG | + | chr3_3:84495290-84495309 | None:intergenic | 40.0% |
| ATTCACCTGAGTTAGAGTGT+GGG | - | chr3_3:84495346-84495365 | Msa0479480:intron | 40.0% | |
| GTTATCACTTCCTGACATTC+AGG | - | chr3_3:84495389-84495408 | Msa0479480:CDS | 40.0% | |
| ACTCTTAAACTTCACTGGTG+AGG | - | chr3_3:84495515-84495534 | Msa0479480:CDS | 40.0% | |
| !! | TGAGGAAGAGCTATTTCTGA+TGG | - | chr3_3:84495533-84495552 | Msa0479480:CDS | 40.0% |
| TCTGTTGGAAAAGATGGGAT+TGG | - | chr3_3:84495558-84495577 | Msa0479480:CDS | 40.0% | |
| AACTCTACTTCAGCCATTTC+AGG | + | chr3_3:84495654-84495673 | None:intergenic | 40.0% | |
| ! | GGATTTTTAACATCTTCGCG+TGG | + | chr3_3:84495687-84495706 | None:intergenic | 40.0% |
| GCCTTTGATGCACATGTTAA+AGG | - | chr3_3:84495771-84495790 | Msa0479480:CDS | 40.0% | |
| AATGTCACAATCTAATGGCG+TGG | - | chr3_3:84495833-84495852 | Msa0479480:CDS | 40.0% | |
| TTGAGGATCTTTAGCTGAAG+CGG | + | chr3_3:84495895-84495914 | None:intergenic | 40.0% | |
| TCATCATTGGATGGAACTTC+CGG | + | chr3_3:84495969-84495988 | None:intergenic | 40.0% | |
| GGGTAGGAAAACATCATCAT+TGG | + | chr3_3:84495982-84496001 | None:intergenic | 40.0% | |
| GATGAACAGGAAATTGTTGG+GGG | + | chr3_3:84496017-84496036 | None:intergenic | 40.0% | |
| GGATGAACAGGAAATTGTTG+GGG | + | chr3_3:84496018-84496037 | None:intergenic | 40.0% | |
| CGGATGAACAGGAAATTGTT+GGG | + | chr3_3:84496019-84496038 | None:intergenic | 40.0% | |
| TCGGATGAACAGGAAATTGT+TGG | + | chr3_3:84496020-84496039 | None:intergenic | 40.0% | |
| !!! | GGGTTTTTTAGCAGCTGATT+CGG | + | chr3_3:84496039-84496058 | None:intergenic | 40.0% |
| !! | TCATTACCAGATGATGGAAC+TGG | + | chr3_3:84496068-84496087 | None:intergenic | 40.0% |
| ATTATGGAGATAGAGCTAGC+AGG | - | chr3_3:84496087-84496106 | Msa0479480:CDS | 40.0% | |
| !! | GAGAGGTAAAGTTTTGATGC+AGG | - | chr3_3:84496109-84496128 | Msa0479480:CDS | 40.0% |
| GTTGAACAAAAAAGCTCCGT+AGG | - | chr3_3:84496131-84496150 | Msa0479480:CDS | 40.0% | |
| TCAGGTTTCTTCTCAGACAA+CGG | - | chr3_3:84496157-84496176 | Msa0479480:CDS | 40.0% | |
| ATTATTGCTTCCAGTGACCT+AGG | - | chr3_3:84496272-84496291 | Msa0479480:CDS | 40.0% | |
| TTGCATCATTGTTTCCACCT+AGG | + | chr3_3:84496292-84496311 | None:intergenic | 40.0% | |
| ! | ACATCGACAGGTTTTTCCTT+AGG | + | chr3_3:84496347-84496366 | None:intergenic | 40.0% |
| TTTACGAAGCTAACATCGAC+AGG | + | chr3_3:84496359-84496378 | None:intergenic | 40.0% | |
| TCACATAAGAAACCAGCACT+CGG | - | chr3_3:84496407-84496426 | Msa0479480:CDS | 40.0% | |
| AGAAATCATGGCCAACCTAA+TGG | - | chr3_3:84496440-84496459 | Msa0479480:CDS | 40.0% | |
| TGTTTCAGGCTAGAACCATT+AGG | + | chr3_3:84496458-84496477 | None:intergenic | 40.0% | |
| !! | TAATGGTTCTAGCCTGAAAC+AGG | - | chr3_3:84496457-84496476 | Msa0479480:CDS | 40.0% |
| ! | AGATGGTGGTTTACAGTGAA+AGG | - | chr3_3:84496558-84496577 | Msa0479480:CDS | 40.0% |
| TTACAGTGAAAGGTTAGACG+AGG | - | chr3_3:84496568-84496587 | Msa0479480:CDS | 40.0% | |
| TTATTCTGATGTAGAGGCCA+TGG | - | chr3_3:84496628-84496647 | Msa0479480:CDS | 40.0% | |
| CATATCAAGTACCTGTAGGA+AGG | + | chr3_3:84496738-84496757 | None:intergenic | 40.0% | |
| CTTCCTACAGGTACTTGATA+TGG | - | chr3_3:84496736-84496755 | Msa0479480:CDS | 40.0% | |
| AGTCCATATCAAGTACCTGT+AGG | + | chr3_3:84496742-84496761 | None:intergenic | 40.0% | |
| ACAGGTACTTGATATGGACT+TGG | - | chr3_3:84496742-84496761 | Msa0479480:CDS | 40.0% | |
| GGTATTACTATTATGTGGCC+AGG | - | chr3_3:84496800-84496819 | Msa0479480:CDS | 40.0% | |
| ! | TATGTGGCCAGGAATTTTAG+TGG | - | chr3_3:84496811-84496830 | Msa0479480:CDS | 40.0% |
| TCAACCACCACTAAAATTCC+TGG | + | chr3_3:84496821-84496840 | None:intergenic | 40.0% | |
| ACTTCACCTATTTGAGCAGT+TGG | - | chr3_3:84496999-84497018 | Msa0479480:intron | 40.0% | |
| AGACTACCAACTGCTCAAAT+AGG | + | chr3_3:84497008-84497027 | None:intergenic | 40.0% | |
| TAAACGTACTATAAGGAGGG+GGG | - | chr3_3:84497096-84497115 | Msa0479480:intron | 40.0% | |
| TCAACACGAAGAAACTAAGC+GGG | - | chr3_3:84497560-84497579 | Msa0479480:exon | 40.0% | |
| !! | AAACTAAGCGGGCTATCATA+AGG | - | chr3_3:84497571-84497590 | Msa0479480:five_prime_UTR | 40.0% |
| ! | GAAGAGAGAGAAAGGGGTTT+TGG | - | chr3_3:84493910-84493929 | Msa0479480:CDS | 45.0% |
| !!! | GAAAGGGGTTTTGGTTTTGG+GGG | - | chr3_3:84493919-84493938 | Msa0479480:CDS | 45.0% |
| TTGGGGGTAGAGAGAAAGAA+TGG | - | chr3_3:84493935-84493954 | Msa0479480:CDS | 45.0% | |
| TGGGGGTAGAGAGAAAGAAT+GGG | - | chr3_3:84493936-84493955 | Msa0479480:CDS | 45.0% | |
| TTTGCTCAAGACCAACGTTG+AGG | - | chr3_3:84494013-84494032 | Msa0479480:intron | 45.0% | |
| TTTGCAGAATGGAGCTTCCT+TGG | - | chr3_3:84494600-84494619 | Msa0479480:intron | 45.0% | |
| ! | GCCTTTTGCAATTGCTTCCA+AGG | + | chr3_3:84494620-84494639 | None:intergenic | 45.0% |
| AGGCGTCCTTAGATACGATA+GGG | + | chr3_3:84494711-84494730 | None:intergenic | 45.0% | |
| !! | AGTGCACAGTTTTCAGGCAA+AGG | + | chr3_3:84494967-84494986 | None:intergenic | 45.0% |
| TCTGGAAGACCATAGTGTGA+CGG | + | chr3_3:84495027-84495046 | None:intergenic | 45.0% | |
| ! | GCTGCTCAAACGTTTTACAC+TGG | - | chr3_3:84495075-84495094 | Msa0479480:CDS | 45.0% |
| ! | TGAATTTGAGGTTCCTCCTC+AGG | + | chr3_3:84495150-84495169 | None:intergenic | 45.0% |
| GGAGGAACCTCAAATTCATG+AGG | - | chr3_3:84495152-84495171 | Msa0479480:CDS | 45.0% | |
| AATGGAACTGCCGAGGAATT+CGG | - | chr3_3:84495189-84495208 | Msa0479480:CDS | 45.0% | |
| ACTCGGAGCACAAATTTGCA+GGG | + | chr3_3:84495305-84495324 | None:intergenic | 45.0% | |
| AACTCGGAGCACAAATTTGC+AGG | + | chr3_3:84495306-84495325 | None:intergenic | 45.0% | |
| GATTCACCTGAGTTAGAGTG+TGG | - | chr3_3:84495345-84495364 | Msa0479480:intron | 45.0% | |
| GAATTCCCACACTCTAACTC+AGG | + | chr3_3:84495354-84495373 | None:intergenic | 45.0% | |
| TGTTCTTCTGTTCTCCAGAC+CGG | + | chr3_3:84495420-84495439 | None:intergenic | 45.0% | |
| GATTCTATTGCTTGCGAGGA+TGG | - | chr3_3:84495468-84495487 | Msa0479480:CDS | 45.0% | |
| TCTGTGCGACATGAAACAGA+CGG | + | chr3_3:84495708-84495727 | None:intergenic | 45.0% | |
| ACAGAAGTAGACGACAATGC+AGG | - | chr3_3:84495723-84495742 | Msa0479480:intron | 45.0% | |
| GACTGAAACAGAGCTGTTAG+CGG | - | chr3_3:84495749-84495768 | Msa0479480:CDS | 45.0% | |
| CATCATTGGATGGAACTTCC+GGG | + | chr3_3:84495968-84495987 | None:intergenic | 45.0% | |
| AGAAGAAACCTGAGCTCCTA+CGG | + | chr3_3:84496150-84496169 | None:intergenic | 45.0% | |
| CAGGTTTCTTCTCAGACAAC+GGG | - | chr3_3:84496158-84496177 | Msa0479480:CDS | 45.0% | |
| TTAGAACCACAAACAGGTCC+TGG | + | chr3_3:84496197-84496216 | None:intergenic | 45.0% | |
| ATTGTTTCCACCTAGGTCAC+TGG | + | chr3_3:84496285-84496304 | None:intergenic | 45.0% | |
| TGCTCTACATGCAAGTCCTA+AGG | - | chr3_3:84496328-84496347 | Msa0479480:CDS | 45.0% | |
| AAGAAACCAGCACTCGGAAA+TGG | - | chr3_3:84496413-84496432 | Msa0479480:CDS | 45.0% | |
| GGAAATGGCCTCAGAAATCA+TGG | - | chr3_3:84496428-84496447 | Msa0479480:CDS | 45.0% | |
| ! | TAGGTTGGCCATGATTTCTG+AGG | + | chr3_3:84496439-84496458 | None:intergenic | 45.0% |
| TCAGGCTAGAACCATTAGGT+TGG | + | chr3_3:84496454-84496473 | None:intergenic | 45.0% | |
| GTTCTAGCCTGAAACAGGAA+CGG | - | chr3_3:84496462-84496481 | Msa0479480:CDS | 45.0% | |
| TTCTAGCCTGAAACAGGAAC+GGG | - | chr3_3:84496463-84496482 | Msa0479480:CDS | 45.0% | |
| TCAGTTGCAACATGCTGAAG+TGG | - | chr3_3:84496511-84496530 | Msa0479480:CDS | 45.0% | |
| CAGTTGCAACATGCTGAAGT+GGG | - | chr3_3:84496512-84496531 | Msa0479480:CDS | 45.0% | |
| AGTTGCAACATGCTGAAGTG+GGG | - | chr3_3:84496513-84496532 | Msa0479480:CDS | 45.0% | |
| AAGTGTGCTCCAATACCATG+AGG | + | chr3_3:84496983-84497002 | None:intergenic | 45.0% | |
| !! | GAGCAGTTGGTAGTCTCTTA+AGG | - | chr3_3:84497012-84497031 | Msa0479480:intron | 45.0% |
| AAACGTACTATAAGGAGGGG+GGG | - | chr3_3:84497097-84497116 | Msa0479480:intron | 45.0% | |
| !! | TGGCCTTTGACTTGTGCTTT+CGG | - | chr3_3:84497262-84497281 | Msa0479480:intron | 45.0% |
| TATGGCTTCACATGGAGCAT+TGG | - | chr3_3:84497629-84497648 | Msa0479480:five_prime_UTR | 45.0% | |
| TTCTTCTCCTTGGACTTCCG+AGG | - | chr3_3:84493983-84494002 | Msa0479480:intron | 50.0% | |
| AGATCATCCTCGGAAGTCCA+AGG | + | chr3_3:84493993-84494012 | None:intergenic | 50.0% | |
| CAAGACCAACGTTGAGGTTG+AGG | - | chr3_3:84494019-84494038 | Msa0479480:intron | 50.0% | |
| ! | GAGGCGTCCTTAGATACGAT+AGG | + | chr3_3:84494712-84494731 | None:intergenic | 50.0% |
| GACGCCTCTTCCTCTATAAC+AGG | - | chr3_3:84494724-84494743 | Msa0479480:CDS | 50.0% | |
| CCTGAAAACTGTGCACTCGA+GGG | - | chr3_3:84494970-84494989 | Msa0479480:CDS | 50.0% | |
| TCCTGACATTCAGGACATGC+CGG | - | chr3_3:84495398-84495417 | Msa0479480:CDS | 50.0% | |
| GGTCTGGAGAACAGAAGAAC+AGG | - | chr3_3:84495419-84495438 | Msa0479480:CDS | 50.0% | |
| TGCTTGCGAGGATGGTTATC+TGG | - | chr3_3:84495476-84495495 | Msa0479480:CDS | 50.0% | |
| ! | GAAGCTGCCATTTGGAACTC+TGG | + | chr3_3:84495873-84495892 | None:intergenic | 50.0% |
| GTTGGGGGAGGCTCATTAAA+GGG | + | chr3_3:84496002-84496021 | None:intergenic | 50.0% | |
| TGTTGGGGGAGGCTCATTAA+AGG | + | chr3_3:84496003-84496022 | None:intergenic | 50.0% | |
| GAACAGGAAATTGTTGGGGG+AGG | + | chr3_3:84496014-84496033 | None:intergenic | 50.0% | |
| !! | AGCAGCTGATTCGGATGAAC+AGG | + | chr3_3:84496030-84496049 | None:intergenic | 50.0% |
| AAAAAGCTCCGTAGGAGCTC+AGG | - | chr3_3:84496139-84496158 | Msa0479480:CDS | 50.0% | |
| AACAGGTCCTGGAAGGCAAT+GGG | + | chr3_3:84496186-84496205 | None:intergenic | 50.0% | |
| AAACAGGTCCTGGAAGGCAA+TGG | + | chr3_3:84496187-84496206 | None:intergenic | 50.0% | |
| AACCACAAACAGGTCCTGGA+AGG | + | chr3_3:84496193-84496212 | None:intergenic | 50.0% | |
| ATTGCTTCCAGTGACCTAGG+TGG | - | chr3_3:84496275-84496294 | Msa0479480:CDS | 50.0% | |
| CTACATCCCGTTCCTGTTTC+AGG | + | chr3_3:84496472-84496491 | None:intergenic | 50.0% | |
| !! | AGATGTTCTGGGGTCTGAGA+TGG | - | chr3_3:84496541-84496560 | Msa0479480:CDS | 50.0% |
| CTGATGTAGAGGCCATGGTA+AGG | - | chr3_3:84496633-84496652 | Msa0479480:CDS | 50.0% | |
| CAACACAGCATGCCTTACCA+TGG | + | chr3_3:84496648-84496667 | None:intergenic | 50.0% | |
| !! | GTGGCCAGGAATTTTAGTGG+TGG | - | chr3_3:84496814-84496833 | Msa0479480:CDS | 50.0% |
| !! | GGCCTTTGACTTGTGCTTTC+GGG | - | chr3_3:84497263-84497282 | Msa0479480:intron | 50.0% |
| ! | GTCCCGAAAGCACAAGTCAA+AGG | + | chr3_3:84497268-84497287 | None:intergenic | 50.0% |
| !! | TAAGCGGGCTATCATAAGGC+TGG | - | chr3_3:84497575-84497594 | Msa0479480:five_prime_UTR | 50.0% |
| GCTATCATAAGGCTGGAGCA+GGG | - | chr3_3:84497582-84497601 | Msa0479480:five_prime_UTR | 50.0% | |
| CAGAGAGCTATGGCTTCACA+TGG | - | chr3_3:84497621-84497640 | Msa0479480:five_prime_UTR | 50.0% | |
| AGAGTGAGAGAATGCGACGC+CGG | + | chr3_3:84493876-84493895 | None:intergenic | 55.0% | |
| GCCTGAAAACTGTGCACTCG+AGG | - | chr3_3:84494969-84494988 | Msa0479480:CDS | 55.0% | |
| ! | CCCTCGAGTGCACAGTTTTC+AGG | + | chr3_3:84494973-84494992 | None:intergenic | 55.0% |
| GCTTCTGAATGGAACTGCCG+AGG | - | chr3_3:84495182-84495201 | Msa0479480:CDS | 55.0% | |
| ACCGGCATGTCCTGAATGTC+AGG | + | chr3_3:84495402-84495421 | None:intergenic | 55.0% | |
| ACATTCAGGACATGCCGGTC+TGG | - | chr3_3:84495403-84495422 | Msa0479480:CDS | 55.0% | |
| CTGAAGCGGAAGCTGCCATT+TGG | + | chr3_3:84495881-84495900 | None:intergenic | 55.0% | |
| GGGGAGGCTCATTAAAGGGT+AGG | + | chr3_3:84495998-84496017 | None:intergenic | 55.0% | |
| GGAGATAGAGCTAGCAGGAG+AGG | - | chr3_3:84496092-84496111 | Msa0479480:CDS | 55.0% | |
| TGCCTTCCAGGACCTGTTTG+TGG | - | chr3_3:84496188-84496207 | Msa0479480:CDS | 55.0% | |
| CTCAGACCCCAGAACATCTG+CGG | + | chr3_3:84496540-84496559 | None:intergenic | 55.0% | |
| !! | TGTTCTGGGGTCTGAGATGG+TGG | - | chr3_3:84496544-84496563 | Msa0479480:CDS | 55.0% |
| GGCTATCATAAGGCTGGAGC+AGG | - | chr3_3:84497581-84497600 | Msa0479480:five_prime_UTR | 55.0% | |
| GAATGCGACGCCGGAAACGA+GGG | + | chr3_3:84493867-84493886 | None:intergenic | 60.0% | |
| AGAATGCGACGCCGGAAACG+AGG | + | chr3_3:84493868-84493887 | None:intergenic | 60.0% | |
| CTGAGGCCATTTCCGAGTGC+TGG | + | chr3_3:84496422-84496441 | None:intergenic | 60.0% | |
| AGTGGGGTCCGCAGATGTTC+TGG | - | chr3_3:84496529-84496548 | Msa0479480:CDS | 60.0% | |
| GTGGGGTCCGCAGATGTTCT+GGG | - | chr3_3:84496530-84496549 | Msa0479480:CDS | 60.0% | |
| TGGGGTCCGCAGATGTTCTG+GGG | - | chr3_3:84496531-84496550 | Msa0479480:CDS | 60.0% | |
| ACGGGAGCCCATTGCCTTCC+AGG | - | chr3_3:84496176-84496195 | Msa0479480:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 84493856 | 84497662 | 84493856 | ID=Msa0479480;Name=Msa0479480 |
| chr3_3 | mRNA | 84493856 | 84497662 | 84493856 | ID=Msa0479480-mRNA-1;Parent=Msa0479480;Name=Msa0479480-mRNA-1;_AED=0.04;_eAED=0.04;_QI=98|0.12|0.11|1|0.25|0.11|9|0|739 |
| chr3_3 | exon | 84493856 | 84493968 | 84493856 | ID=Msa0479480-mRNA-1:exon:24030;Parent=Msa0479480-mRNA-1 |
| chr3_3 | exon | 84494718 | 84494772 | 84494718 | ID=Msa0479480-mRNA-1:exon:24029;Parent=Msa0479480-mRNA-1 |
| chr3_3 | exon | 84494869 | 84495102 | 84494869 | ID=Msa0479480-mRNA-1:exon:24028;Parent=Msa0479480-mRNA-1 |
| chr3_3 | exon | 84495124 | 84495357 | 84495124 | ID=Msa0479480-mRNA-1:exon:24027;Parent=Msa0479480-mRNA-1 |
| chr3_3 | exon | 84495388 | 84495716 | 84495388 | ID=Msa0479480-mRNA-1:exon:24026;Parent=Msa0479480-mRNA-1 |
| chr3_3 | exon | 84495726 | 84495875 | 84495726 | ID=Msa0479480-mRNA-1:exon:24025;Parent=Msa0479480-mRNA-1 |
| chr3_3 | exon | 84495885 | 84496686 | 84495885 | ID=Msa0479480-mRNA-1:exon:24024;Parent=Msa0479480-mRNA-1 |
| chr3_3 | exon | 84496699 | 84496911 | 84496699 | ID=Msa0479480-mRNA-1:exon:24023;Parent=Msa0479480-mRNA-1 |
| chr3_3 | exon | 84497478 | 84497662 | 84497478 | ID=Msa0479480-mRNA-1:exon:24022;Parent=Msa0479480-mRNA-1 |
| chr3_3 | five_prime_UTR | 84497565 | 84497662 | 84497565 | ID=Msa0479480-mRNA-1:five_prime_utr;Parent=Msa0479480-mRNA-1 |
| chr3_3 | CDS | 84497478 | 84497564 | 84497478 | ID=Msa0479480-mRNA-1:cds;Parent=Msa0479480-mRNA-1 |
| chr3_3 | CDS | 84496699 | 84496911 | 84496699 | ID=Msa0479480-mRNA-1:cds;Parent=Msa0479480-mRNA-1 |
| chr3_3 | CDS | 84495885 | 84496686 | 84495885 | ID=Msa0479480-mRNA-1:cds;Parent=Msa0479480-mRNA-1 |
| chr3_3 | CDS | 84495726 | 84495875 | 84495726 | ID=Msa0479480-mRNA-1:cds;Parent=Msa0479480-mRNA-1 |
| chr3_3 | CDS | 84495388 | 84495716 | 84495388 | ID=Msa0479480-mRNA-1:cds;Parent=Msa0479480-mRNA-1 |
| chr3_3 | CDS | 84495124 | 84495357 | 84495124 | ID=Msa0479480-mRNA-1:cds;Parent=Msa0479480-mRNA-1 |
| chr3_3 | CDS | 84494869 | 84495102 | 84494869 | ID=Msa0479480-mRNA-1:cds;Parent=Msa0479480-mRNA-1 |
| chr3_3 | CDS | 84494718 | 84494772 | 84494718 | ID=Msa0479480-mRNA-1:cds;Parent=Msa0479480-mRNA-1 |
| chr3_3 | CDS | 84493856 | 84493968 | 84493856 | ID=Msa0479480-mRNA-1:cds;Parent=Msa0479480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
