Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305020 | AFK36047.1 | 73.171 | 82 | 22 | 0 | 1 | 82 | 1 | 82 | 7.41e-36 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305020 | I3S705 | 73.171 | 82 | 22 | 0 | 1 | 82 | 1 | 82 | 3.54e-36 | 127 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0227890 | Msa0305020 | 0.843759 | 1.149666e-58 | -8.615850e-47 |
| Msa0261540 | Msa0305020 | 0.888278 | 6.801546e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305020 | MtrunA17_Chr2g0323741 | 73.171 | 82 | 22 | 0 | 1 | 82 | 1 | 82 | 6.82e-40 | 127 |
| Msa0305020 | MtrunA17_Chr2g0323751 | 89.062 | 64 | 7 | 0 | 1 | 64 | 1 | 64 | 4.42e-38 | 123 |
| Msa0305020 | MtrunA17_Chr2g0323761 | 81.667 | 60 | 10 | 1 | 1 | 60 | 1 | 59 | 1.10e-30 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 26 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGAGACGAGTTCGGTTT+TGG | 0.261084 | 2_3:-62436484 | None:intergenic |
| GCTGATTTGCACTTATGAAT+TGG | 0.319739 | 2_3:-62436446 | None:intergenic |
| AAACATGTGAAGGTTCTTCT+TGG | 0.327112 | 2_3:+62437305 | Msa0305020:intron |
| TGAGTTACTTAAACCGTGTT+TGG | 0.337550 | 2_3:+62436384 | Msa0305020:CDS |
| CATAAGTGCAAATCAGCTCT+TGG | 0.437934 | 2_3:+62436452 | Msa0305020:CDS |
| TGGCTTTCAAGATGCGTTGG+AGG | 0.448982 | 2_3:+62437325 | Msa0305020:CDS |
| AAACTTTGGTGTGGAGGAGC+TGG | 0.481261 | 2_3:+62437352 | Msa0305020:CDS |
| TCTTGGCTTTCAAGATGCGT+TGG | 0.495531 | 2_3:+62437322 | Msa0305020:CDS |
| GTTGTCCAGCGTCGTTGTAT+CGG | 0.511337 | 2_3:+62436538 | Msa0305020:CDS |
| GAATGCTGACAAAGCACCAC+CGG | 0.532950 | 2_3:-62436510 | None:intergenic |
| CGGCGGAGAAGAGACGAGTT+CGG | 0.533512 | 2_3:-62436490 | None:intergenic |
| GATGGCAGCAACCGTGGCTG+TGG | 0.536890 | 2_3:+62436406 | Msa0305020:CDS |
| GCAACCGTGGCTGTGGCACA+AGG | 0.556834 | 2_3:+62436413 | Msa0305020:CDS |
| ACTCGTCTCTTCTCCGCCGG+TGG | 0.562949 | 2_3:+62436494 | Msa0305020:CDS |
| GGCTGTAAACTTTGGTGTGG+AGG | 0.576400 | 2_3:+62437346 | Msa0305020:CDS |
| TTACTTAAACCGTGTTTGGA+TGG | 0.578366 | 2_3:+62436388 | Msa0305020:CDS |
| CGGTTGCTGCCATCCAAACA+CGG | 0.578962 | 2_3:-62436397 | None:intergenic |
| GTGGCCTTGTGCCACAGCCA+CGG | 0.579913 | 2_3:-62436417 | None:intergenic |
| TGCTTCCGATACAACGACGC+TGG | 0.592056 | 2_3:-62436543 | None:intergenic |
| CGAACTCGTCTCTTCTCCGC+CGG | 0.592246 | 2_3:+62436491 | Msa0305020:CDS |
| GCGTTGGAGGCTGTAAACTT+TGG | 0.615087 | 2_3:+62437338 | Msa0305020:CDS |
| GATACAACGACGCTGGACAA+CGG | 0.631291 | 2_3:-62436536 | None:intergenic |
| TGTTTGGATGGCAGCAACCG+TGG | 0.633356 | 2_3:+62436400 | Msa0305020:CDS |
| GGAGGCTGTAAACTTTGGTG+TGG | 0.644788 | 2_3:+62437343 | Msa0305020:CDS |
| TGCTGACAAAGCACCACCGG+CGG | 0.666936 | 2_3:-62436507 | None:intergenic |
| ACTTATGAATTGGATCAGTG+TGG | 0.757374 | 2_3:-62436436 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCAAGAAAACAACATATA+GGG | - | chr2_3:62436709-62436728 | None:intergenic | 20.0% |
| !!! | TTTTCTTGAATGAGAAATAT+TGG | + | chr2_3:62436718-62436737 | Msa0305020:intron | 20.0% |
| !!! | TTGATGAGTATTTTTTCATT+TGG | + | chr2_3:62436995-62437014 | Msa0305020:intron | 20.0% |
| !! | TGCTAAAAGTTAGTTAATTT+AGG | + | chr2_3:62437021-62437040 | Msa0305020:intron | 20.0% |
| !! | AAATCAAACATATGCAAAAA+AGG | + | chr2_3:62437379-62437398 | Msa0305020:CDS | 20.0% |
| !! | ATTCAAGAAAACAACATATA+GGG | - | chr2_3:62436709-62436728 | None:intergenic | 20.0% |
| !!! | TTTTCTTGAATGAGAAATAT+TGG | + | chr2_3:62436718-62436737 | Msa0305020:intron | 20.0% |
| !!! | TTGATGAGTATTTTTTCATT+TGG | + | chr2_3:62436995-62437014 | Msa0305020:intron | 20.0% |
| !! | TGCTAAAAGTTAGTTAATTT+AGG | + | chr2_3:62437021-62437040 | Msa0305020:intron | 20.0% |
| !! | AAATCAAACATATGCAAAAA+AGG | + | chr2_3:62437379-62437398 | Msa0305020:CDS | 20.0% |
| ! | AAGTTATGTACATGAATTGT+TGG | + | chr2_3:62436624-62436643 | Msa0305020:intron | 25.0% |
| ! | AGTTATGTACATGAATTGTT+GGG | + | chr2_3:62436625-62436644 | Msa0305020:intron | 25.0% |
| ! | CATTCAAGAAAACAACATAT+AGG | - | chr2_3:62436710-62436729 | None:intergenic | 25.0% |
| ! | TGAATGAGAAATATTGGAAA+AGG | + | chr2_3:62436724-62436743 | Msa0305020:intron | 25.0% |
| ! | AATATTGGAAAAGGAAACAA+TGG | + | chr2_3:62436733-62436752 | Msa0305020:intron | 25.0% |
| ! | ATATTGGAAAAGGAAACAAT+GGG | + | chr2_3:62436734-62436753 | Msa0305020:intron | 25.0% |
| ! | TGCAAAATTTCCTTGAATAT+TGG | + | chr2_3:62436839-62436858 | Msa0305020:intron | 25.0% |
| ! | TATACAAGTGAATGAAATCA+AGG | + | chr2_3:62436872-62436891 | Msa0305020:intron | 25.0% |
| ! | TCTAAGGAATATTTCATGAT+AGG | - | chr2_3:62436929-62436948 | None:intergenic | 25.0% |
| ! | GTAGACTTATTTATAGTCTA+AGG | - | chr2_3:62436945-62436964 | None:intergenic | 25.0% |
| !!! | AATTTAGGTTTGTTAAGAGT+TGG | + | chr2_3:62437036-62437055 | Msa0305020:intron | 25.0% |
| ! | GTCAAGAAAATTGTTCAAAA+CGG | - | chr2_3:62437241-62437260 | None:intergenic | 25.0% |
| ! | AAGTTATGTACATGAATTGT+TGG | + | chr2_3:62436624-62436643 | Msa0305020:intron | 25.0% |
| ! | AGTTATGTACATGAATTGTT+GGG | + | chr2_3:62436625-62436644 | Msa0305020:intron | 25.0% |
| ! | CATTCAAGAAAACAACATAT+AGG | - | chr2_3:62436710-62436729 | None:intergenic | 25.0% |
| ! | TGAATGAGAAATATTGGAAA+AGG | + | chr2_3:62436724-62436743 | Msa0305020:intron | 25.0% |
| ! | AATATTGGAAAAGGAAACAA+TGG | + | chr2_3:62436733-62436752 | Msa0305020:intron | 25.0% |
| ! | ATATTGGAAAAGGAAACAAT+GGG | + | chr2_3:62436734-62436753 | Msa0305020:intron | 25.0% |
| ! | TGCAAAATTTCCTTGAATAT+TGG | + | chr2_3:62436839-62436858 | Msa0305020:intron | 25.0% |
| ! | TATACAAGTGAATGAAATCA+AGG | + | chr2_3:62436872-62436891 | Msa0305020:intron | 25.0% |
| ! | TCTAAGGAATATTTCATGAT+AGG | - | chr2_3:62436929-62436948 | None:intergenic | 25.0% |
| ! | GTAGACTTATTTATAGTCTA+AGG | - | chr2_3:62436945-62436964 | None:intergenic | 25.0% |
| !!! | AATTTAGGTTTGTTAAGAGT+TGG | + | chr2_3:62437036-62437055 | Msa0305020:intron | 25.0% |
| ! | GTCAAGAAAATTGTTCAAAA+CGG | - | chr2_3:62437241-62437260 | None:intergenic | 25.0% |
| ! | AACTTTCTGAAGAGAATCAT+CGG | - | chr2_3:62436609-62436628 | None:intergenic | 30.0% |
| GTTATGTACATGAATTGTTG+GGG | + | chr2_3:62436626-62436645 | Msa0305020:intron | 30.0% | |
| TAAACGTATCAAATTGTCCA+AGG | - | chr2_3:62436764-62436783 | None:intergenic | 30.0% | |
| ATCTTCTTCGTTCAAATTGT+GGG | + | chr2_3:62436794-62436813 | Msa0305020:intron | 30.0% | |
| TTTGACTCAACCAATATTCA+AGG | - | chr2_3:62436852-62436871 | None:intergenic | 30.0% | |
| ! | ATTAGTGACTGTTTGTTAGT+AGG | + | chr2_3:62437070-62437089 | Msa0305020:intron | 30.0% |
| ! | AACTTTCTGAAGAGAATCAT+CGG | - | chr2_3:62436609-62436628 | None:intergenic | 30.0% |
| GTTATGTACATGAATTGTTG+GGG | + | chr2_3:62436626-62436645 | Msa0305020:intron | 30.0% | |
| TAAACGTATCAAATTGTCCA+AGG | - | chr2_3:62436764-62436783 | None:intergenic | 30.0% | |
| ATCTTCTTCGTTCAAATTGT+GGG | + | chr2_3:62436794-62436813 | Msa0305020:intron | 30.0% | |
| TTTGACTCAACCAATATTCA+AGG | - | chr2_3:62436852-62436871 | None:intergenic | 30.0% | |
| ! | ATTAGTGACTGTTTGTTAGT+AGG | + | chr2_3:62437070-62437089 | Msa0305020:intron | 30.0% |
| TGAGTTACTTAAACCGTGTT+TGG | + | chr2_3:62436384-62436403 | Msa0305020:CDS | 35.0% | |
| TTACTTAAACCGTGTTTGGA+TGG | + | chr2_3:62436388-62436407 | Msa0305020:CDS | 35.0% | |
| ACTTATGAATTGGATCAGTG+TGG | - | chr2_3:62436439-62436458 | None:intergenic | 35.0% | |
| !! | GCTGATTTGCACTTATGAAT+TGG | - | chr2_3:62436449-62436468 | None:intergenic | 35.0% |
| GCAAGCAGAAATGATTCTAA+GGG | + | chr2_3:62436672-62436691 | Msa0305020:intron | 35.0% | |
| GATCTTCTTCGTTCAAATTG+TGG | + | chr2_3:62436793-62436812 | Msa0305020:intron | 35.0% | |
| GCAACTTGAACAAATATTCC+TGG | - | chr2_3:62436822-62436841 | None:intergenic | 35.0% | |
| AAAGCAAAGAGAAGCAAAAG+AGG | + | chr2_3:62436895-62436914 | Msa0305020:intron | 35.0% | |
| AAGCAAAGAGAAGCAAAAGA+GGG | + | chr2_3:62436896-62436915 | Msa0305020:intron | 35.0% | |
| TTGATCAGCTCACTAATCAT+TGG | - | chr2_3:62436973-62436992 | None:intergenic | 35.0% | |
| CGAATACAACACATATGTAG+AGG | - | chr2_3:62437105-62437124 | None:intergenic | 35.0% | |
| CTCTCTCTCATATGTTCTAA+TGG | + | chr2_3:62437169-62437188 | Msa0305020:intron | 35.0% | |
| GTTCTAATGGTATGTTAGCT+CGG | + | chr2_3:62437182-62437201 | Msa0305020:intron | 35.0% | |
| CATTCTTCTCTCATGTTCAA+TGG | + | chr2_3:62437260-62437279 | Msa0305020:intron | 35.0% | |
| TAGATGACACAAACATGTGA+AGG | + | chr2_3:62437295-62437314 | Msa0305020:intron | 35.0% | |
| AAACATGTGAAGGTTCTTCT+TGG | + | chr2_3:62437305-62437324 | Msa0305020:intron | 35.0% | |
| TGAGTTACTTAAACCGTGTT+TGG | + | chr2_3:62436384-62436403 | Msa0305020:CDS | 35.0% | |
| TTACTTAAACCGTGTTTGGA+TGG | + | chr2_3:62436388-62436407 | Msa0305020:CDS | 35.0% | |
| ACTTATGAATTGGATCAGTG+TGG | - | chr2_3:62436439-62436458 | None:intergenic | 35.0% | |
| !! | GCTGATTTGCACTTATGAAT+TGG | - | chr2_3:62436449-62436468 | None:intergenic | 35.0% |
| GCAAGCAGAAATGATTCTAA+GGG | + | chr2_3:62436672-62436691 | Msa0305020:intron | 35.0% | |
| GATCTTCTTCGTTCAAATTG+TGG | + | chr2_3:62436793-62436812 | Msa0305020:intron | 35.0% | |
| GCAACTTGAACAAATATTCC+TGG | - | chr2_3:62436822-62436841 | None:intergenic | 35.0% | |
| AAAGCAAAGAGAAGCAAAAG+AGG | + | chr2_3:62436895-62436914 | Msa0305020:intron | 35.0% | |
| AAGCAAAGAGAAGCAAAAGA+GGG | + | chr2_3:62436896-62436915 | Msa0305020:intron | 35.0% | |
| TTGATCAGCTCACTAATCAT+TGG | - | chr2_3:62436973-62436992 | None:intergenic | 35.0% | |
| CGAATACAACACATATGTAG+AGG | - | chr2_3:62437105-62437124 | None:intergenic | 35.0% | |
| CTCTCTCTCATATGTTCTAA+TGG | + | chr2_3:62437169-62437188 | Msa0305020:intron | 35.0% | |
| GTTCTAATGGTATGTTAGCT+CGG | + | chr2_3:62437182-62437201 | Msa0305020:intron | 35.0% | |
| CATTCTTCTCTCATGTTCAA+TGG | + | chr2_3:62437260-62437279 | Msa0305020:intron | 35.0% | |
| TAGATGACACAAACATGTGA+AGG | + | chr2_3:62437295-62437314 | Msa0305020:intron | 35.0% | |
| AAACATGTGAAGGTTCTTCT+TGG | + | chr2_3:62437305-62437324 | Msa0305020:intron | 35.0% | |
| CATAAGTGCAAATCAGCTCT+TGG | + | chr2_3:62436452-62436471 | Msa0305020:CDS | 40.0% | |
| TTTCTCCTCAGAACTCATGA+CGG | - | chr2_3:62436570-62436589 | None:intergenic | 40.0% | |
| TACATGAATTGTTGGGGTCA+AGG | + | chr2_3:62436632-62436651 | Msa0305020:intron | 40.0% | |
| GGCAAGCAGAAATGATTCTA+AGG | + | chr2_3:62436671-62436690 | Msa0305020:intron | 40.0% | |
| AGGAAACAATGGGATTACCT+TGG | + | chr2_3:62436744-62436763 | Msa0305020:intron | 40.0% | |
| AGCTCACTAATCATTGGCAA+TGG | - | chr2_3:62436967-62436986 | None:intergenic | 40.0% | |
| TGCAAAAAAGGTAGCGTACA+AGG | + | chr2_3:62437391-62437410 | Msa0305020:CDS | 40.0% | |
| AAAAAAGGTAGCGTACAAGG+AGG | + | chr2_3:62437394-62437413 | Msa0305020:CDS | 40.0% | |
| CATAAGTGCAAATCAGCTCT+TGG | + | chr2_3:62436452-62436471 | Msa0305020:CDS | 40.0% | |
| TTTCTCCTCAGAACTCATGA+CGG | - | chr2_3:62436570-62436589 | None:intergenic | 40.0% | |
| TACATGAATTGTTGGGGTCA+AGG | + | chr2_3:62436632-62436651 | Msa0305020:intron | 40.0% | |
| GGCAAGCAGAAATGATTCTA+AGG | + | chr2_3:62436671-62436690 | Msa0305020:intron | 40.0% | |
| AGGAAACAATGGGATTACCT+TGG | + | chr2_3:62436744-62436763 | Msa0305020:intron | 40.0% | |
| AGCTCACTAATCATTGGCAA+TGG | - | chr2_3:62436967-62436986 | None:intergenic | 40.0% | |
| TGCAAAAAAGGTAGCGTACA+AGG | + | chr2_3:62437391-62437410 | Msa0305020:CDS | 40.0% | |
| AAAAAAGGTAGCGTACAAGG+AGG | + | chr2_3:62437394-62437413 | Msa0305020:CDS | 40.0% | |
| ! | AGAAGAGACGAGTTCGGTTT+TGG | - | chr2_3:62436487-62436506 | None:intergenic | 45.0% |
| ATTGTTGGGGTCAAGGCTAA+TGG | + | chr2_3:62436639-62436658 | Msa0305020:intron | 45.0% | |
| CAAGGCTAATGGTGACAACA+AGG | + | chr2_3:62436650-62436669 | Msa0305020:intron | 45.0% | |
| TCGTTCAAATTGTGGGATCC+AGG | + | chr2_3:62436801-62436820 | Msa0305020:intron | 45.0% | |
| ! | TCTTGGCTTTCAAGATGCGT+TGG | + | chr2_3:62437322-62437341 | Msa0305020:CDS | 45.0% |
| ! | AGAAGAGACGAGTTCGGTTT+TGG | - | chr2_3:62436487-62436506 | None:intergenic | 45.0% |
| ATTGTTGGGGTCAAGGCTAA+TGG | + | chr2_3:62436639-62436658 | Msa0305020:intron | 45.0% | |
| CAAGGCTAATGGTGACAACA+AGG | + | chr2_3:62436650-62436669 | Msa0305020:intron | 45.0% | |
| TCGTTCAAATTGTGGGATCC+AGG | + | chr2_3:62436801-62436820 | Msa0305020:intron | 45.0% | |
| ! | TCTTGGCTTTCAAGATGCGT+TGG | + | chr2_3:62437322-62437341 | Msa0305020:CDS | 45.0% |
| ! | GAATGCTGACAAAGCACCAC+CGG | - | chr2_3:62436513-62436532 | None:intergenic | 50.0% |
| GATACAACGACGCTGGACAA+CGG | - | chr2_3:62436539-62436558 | None:intergenic | 50.0% | |
| GTTGTCCAGCGTCGTTGTAT+CGG | + | chr2_3:62436538-62436557 | Msa0305020:CDS | 50.0% | |
| AGCAACCGTCATGAGTTCTG+AGG | + | chr2_3:62436562-62436581 | Msa0305020:intron | 50.0% | |
| TGGCTTTCAAGATGCGTTGG+AGG | + | chr2_3:62437325-62437344 | Msa0305020:CDS | 50.0% | |
| GCGTTGGAGGCTGTAAACTT+TGG | + | chr2_3:62437338-62437357 | Msa0305020:CDS | 50.0% | |
| GGAGGCTGTAAACTTTGGTG+TGG | + | chr2_3:62437343-62437362 | Msa0305020:CDS | 50.0% | |
| ! | GGCTGTAAACTTTGGTGTGG+AGG | + | chr2_3:62437346-62437365 | Msa0305020:CDS | 50.0% |
| ! | AAACTTTGGTGTGGAGGAGC+TGG | + | chr2_3:62437352-62437371 | Msa0305020:CDS | 50.0% |
| ! | GAATGCTGACAAAGCACCAC+CGG | - | chr2_3:62436513-62436532 | None:intergenic | 50.0% |
| GATACAACGACGCTGGACAA+CGG | - | chr2_3:62436539-62436558 | None:intergenic | 50.0% | |
| GTTGTCCAGCGTCGTTGTAT+CGG | + | chr2_3:62436538-62436557 | Msa0305020:CDS | 50.0% | |
| AGCAACCGTCATGAGTTCTG+AGG | + | chr2_3:62436562-62436581 | Msa0305020:intron | 50.0% | |
| TGGCTTTCAAGATGCGTTGG+AGG | + | chr2_3:62437325-62437344 | Msa0305020:CDS | 50.0% | |
| GCGTTGGAGGCTGTAAACTT+TGG | + | chr2_3:62437338-62437357 | Msa0305020:CDS | 50.0% | |
| GGAGGCTGTAAACTTTGGTG+TGG | + | chr2_3:62437343-62437362 | Msa0305020:CDS | 50.0% | |
| ! | GGCTGTAAACTTTGGTGTGG+AGG | + | chr2_3:62437346-62437365 | Msa0305020:CDS | 50.0% |
| ! | AAACTTTGGTGTGGAGGAGC+TGG | + | chr2_3:62437352-62437371 | Msa0305020:CDS | 50.0% |
| CGGTTGCTGCCATCCAAACA+CGG | - | chr2_3:62436400-62436419 | None:intergenic | 55.0% | |
| TGTTTGGATGGCAGCAACCG+TGG | + | chr2_3:62436400-62436419 | Msa0305020:CDS | 55.0% | |
| TGCTTCCGATACAACGACGC+TGG | - | chr2_3:62436546-62436565 | None:intergenic | 55.0% | |
| CGGTTGCTGCCATCCAAACA+CGG | - | chr2_3:62436400-62436419 | None:intergenic | 55.0% | |
| TGTTTGGATGGCAGCAACCG+TGG | + | chr2_3:62436400-62436419 | Msa0305020:CDS | 55.0% | |
| TGCTTCCGATACAACGACGC+TGG | - | chr2_3:62436546-62436565 | None:intergenic | 55.0% | |
| CGGCGGAGAAGAGACGAGTT+CGG | - | chr2_3:62436493-62436512 | None:intergenic | 60.0% | |
| CGAACTCGTCTCTTCTCCGC+CGG | + | chr2_3:62436491-62436510 | Msa0305020:CDS | 60.0% | |
| ! | TGCTGACAAAGCACCACCGG+CGG | - | chr2_3:62436510-62436529 | None:intergenic | 60.0% |
| CGGCGGAGAAGAGACGAGTT+CGG | - | chr2_3:62436493-62436512 | None:intergenic | 60.0% | |
| CGAACTCGTCTCTTCTCCGC+CGG | + | chr2_3:62436491-62436510 | Msa0305020:CDS | 60.0% | |
| ! | TGCTGACAAAGCACCACCGG+CGG | - | chr2_3:62436510-62436529 | None:intergenic | 60.0% |
| GATGGCAGCAACCGTGGCTG+TGG | + | chr2_3:62436406-62436425 | Msa0305020:CDS | 65.0% | |
| GCAACCGTGGCTGTGGCACA+AGG | + | chr2_3:62436413-62436432 | Msa0305020:CDS | 65.0% | |
| !! | GTGGCCTTGTGCCACAGCCA+CGG | - | chr2_3:62436420-62436439 | None:intergenic | 65.0% |
| ACTCGTCTCTTCTCCGCCGG+TGG | + | chr2_3:62436494-62436513 | Msa0305020:CDS | 65.0% | |
| ! | GCTCGGTTCGATCGCGACGA+AGG | + | chr2_3:62437199-62437218 | Msa0305020:intron | 65.0% |
| GATGGCAGCAACCGTGGCTG+TGG | + | chr2_3:62436406-62436425 | Msa0305020:CDS | 65.0% | |
| GCAACCGTGGCTGTGGCACA+AGG | + | chr2_3:62436413-62436432 | Msa0305020:CDS | 65.0% | |
| !! | GTGGCCTTGTGCCACAGCCA+CGG | - | chr2_3:62436420-62436439 | None:intergenic | 65.0% |
| ACTCGTCTCTTCTCCGCCGG+TGG | + | chr2_3:62436494-62436513 | Msa0305020:CDS | 65.0% | |
| ! | GCTCGGTTCGATCGCGACGA+AGG | + | chr2_3:62437199-62437218 | Msa0305020:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 62436383 | 62437463 | 62436383 | ID=Msa0305020;Name=Msa0305020 |
| chr2_3 | mRNA | 62436383 | 62437463 | 62436383 | ID=Msa0305020-mRNA-1;Parent=Msa0305020;Name=Msa0305020-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|0|0|2|0|110 |
| chr2_3 | exon | 62436383 | 62436568 | 62436383 | ID=Msa0305020-mRNA-1:exon:20861;Parent=Msa0305020-mRNA-1 |
| chr2_3 | exon | 62437317 | 62437463 | 62437317 | ID=Msa0305020-mRNA-1:exon:20862;Parent=Msa0305020-mRNA-1 |
| chr2_3 | CDS | 62436383 | 62436568 | 62436383 | ID=Msa0305020-mRNA-1:cds;Parent=Msa0305020-mRNA-1 |
| chr2_3 | CDS | 62437317 | 62437463 | 62437317 | ID=Msa0305020-mRNA-1:cds;Parent=Msa0305020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
