Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305060 | XP_013465025.1 | 99.631 | 271 | 1 | 0 | 1 | 271 | 1 | 271 | 0.0 | 559 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305060 | sp|Q8VYN2|VAP42_ARATH | 64.310 | 297 | 78 | 4 | 1 | 271 | 1 | 295 | 3.97e-127 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305060 | B7FKV5 | 99.631 | 271 | 1 | 0 | 1 | 271 | 1 | 271 | 0.0 | 559 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0227830 | Msa0305060 | 0.929911 | 3.516121e-93 | -8.615850e-47 |
| Msa0261530 | Msa0305060 | 0.930696 | 1.124237e-93 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305060 | MtrunA17_Chr2g0323731 | 99.631 | 271 | 1 | 0 | 1 | 271 | 1 | 271 | 0.0 | 559 |
| Msa0305060 | MtrunA17_Chr4g0048491 | 67.897 | 271 | 82 | 3 | 1 | 271 | 1 | 266 | 4.92e-123 | 351 |
| Msa0305060 | MtrunA17_Chr2g0318581 | 64.504 | 262 | 63 | 4 | 6 | 266 | 8 | 240 | 2.38e-108 | 313 |
| Msa0305060 | MtrunA17_Chr7g0230901 | 31.148 | 122 | 77 | 2 | 87 | 205 | 11 | 128 | 4.14e-11 | 61.6 |
| Msa0305060 | MtrunA17_Chr5g0399141 | 31.967 | 122 | 76 | 2 | 87 | 205 | 13 | 130 | 6.04e-11 | 61.2 |
| Msa0305060 | MtrunA17_Chr4g0056231 | 32.773 | 119 | 73 | 2 | 87 | 202 | 12 | 126 | 6.40e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305060 | AT4G21450.1 | 64.310 | 297 | 78 | 4 | 1 | 271 | 1 | 295 | 4.04e-128 | 365 |
| Msa0305060 | AT4G21450.3 | 60.127 | 316 | 79 | 5 | 1 | 271 | 1 | 314 | 3.26e-122 | 351 |
| Msa0305060 | AT5G54110.1 | 69.565 | 253 | 69 | 3 | 16 | 266 | 16 | 262 | 7.49e-107 | 310 |
| Msa0305060 | AT4G05060.1 | 58.719 | 281 | 97 | 4 | 1 | 262 | 1 | 281 | 8.33e-100 | 293 |
| Msa0305060 | AT4G21450.2 | 59.048 | 210 | 60 | 3 | 1 | 184 | 1 | 210 | 2.24e-74 | 226 |
| Msa0305060 | AT5G54110.2 | 59.890 | 182 | 66 | 3 | 4 | 184 | 5 | 180 | 2.43e-53 | 172 |
Find 73 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATTTCCGGTGAGATTC+CGG | 0.211669 | 2_3:-62476109 | Msa0305060:five_prime_UTR |
| TTGCCGGAAACTTCAATTTC+CGG | 0.244323 | 2_3:-62476120 | Msa0305060:five_prime_UTR |
| CGGCAAATGGGTCGTTGAAT+TGG | 0.258021 | 2_3:+62476137 | None:intergenic |
| TTGTGACTTGTTTGCCAAAA+TGG | 0.267547 | 2_3:+62476019 | None:intergenic |
| TCACCGGAAATTGAAGTTTC+CGG | 0.278752 | 2_3:+62476117 | None:intergenic |
| AGGCACTAATCTGTCAATTA+TGG | 0.308763 | 2_3:-62472288 | Msa0305060:three_prime_UTR |
| CAAGGAAAGTAGAGCTTGTT+AGG | 0.313060 | 2_3:+62475821 | None:intergenic |
| CAAGTCTCATGTAGCTTTCA+AGG | 0.338891 | 2_3:-62475082 | Msa0305060:intron |
| TGTTCTTAAATTTAATTCCT+TGG | 0.346163 | 2_3:-62472311 | Msa0305060:three_prime_UTR |
| ATGAACCTGGTAAGCAAGTT+AGG | 0.348697 | 2_3:-62475131 | Msa0305060:CDS |
| TTGTGGAAGATGGATTTATT+TGG | 0.357321 | 2_3:+62476203 | None:intergenic |
| AAATTGAAGTTTCCGGCAAA+TGG | 0.358528 | 2_3:+62476124 | None:intergenic |
| CAATTCAACGACCCATTTGC+CGG | 0.374352 | 2_3:-62476136 | Msa0305060:five_prime_UTR |
| CTCATTTCTAATAATATTTG+TGG | 0.376855 | 2_3:-62472207 | Msa0305060:three_prime_UTR |
| AAATGGCACATTACCAGTTC+TGG | 0.385154 | 2_3:+62473638 | None:intergenic |
| CTTACAGGGCTGTTTCGGTC+AGG | 0.389728 | 2_3:+62473286 | None:intergenic |
| GGCAAATGGGTCGTTGAATT+GGG | 0.392317 | 2_3:+62476138 | None:intergenic |
| CATAGCTATCTACAAGTTGT+AGG | 0.392403 | 2_3:+62472117 | None:intergenic |
| ATAATCTTACAGGGCTGTTT+CGG | 0.396911 | 2_3:+62473281 | None:intergenic |
| AGCTGTAGAGCAAATTCTTC+GGG | 0.398279 | 2_3:-62473323 | Msa0305060:CDS |
| AAGGACTTGTTATAGATGAA+TGG | 0.401395 | 2_3:-62473087 | Msa0305060:CDS |
| GAGACAGGGCCACGAGTAGC+TGG | 0.404871 | 2_3:-62473112 | Msa0305060:CDS |
| CCTAAAAGTGCAAGGTGAAA+TGG | 0.412866 | 2_3:-62473669 | Msa0305060:CDS |
| AAGAAACCACCGGAGGAGAC+AGG | 0.419468 | 2_3:-62473127 | Msa0305060:CDS |
| GCACTCCTAACTTGCTTACC+AGG | 0.419468 | 2_3:+62475126 | None:intergenic |
| CTAAATCTTTGCTTCCTACT+AGG | 0.428995 | 2_3:-62475865 | Msa0305060:CDS |
| CAGGATCTGATGGAAAAGTT+TGG | 0.433561 | 2_3:-62476057 | Msa0305060:CDS |
| AGGACTTGTTATAGATGAAT+GGG | 0.451585 | 2_3:-62473086 | Msa0305060:intron |
| TCCTTGTGTAGAAGGAAAGA+AGG | 0.456645 | 2_3:-62472443 | Msa0305060:intron |
| AGCTGAGGCCGAGGCTGCAT+TGG | 0.458362 | 2_3:-62473158 | Msa0305060:CDS |
| AATTGAAGTTTCCGGCAAAT+GGG | 0.458853 | 2_3:+62476125 | None:intergenic |
| TAGCTGTAGAGCAAATTCTT+CGG | 0.461589 | 2_3:-62473324 | Msa0305060:CDS |
| TACAAAAGATCTTTGACATA+AGG | 0.467380 | 2_3:+62472334 | None:intergenic |
| AATGGACTATGTACCAGAAC+TGG | 0.479335 | 2_3:-62473651 | Msa0305060:intron |
| AGACGAAGTCTTCTCCTAGT+AGG | 0.481638 | 2_3:+62475851 | None:intergenic |
| TCGTGCTTCCAATGCAGCCT+CGG | 0.488925 | 2_3:+62473150 | None:intergenic |
| TTGGCCAAGCAGCAGGTTGA+AGG | 0.492022 | 2_3:-62472411 | Msa0305060:CDS |
| AGTTGTTACATGCGCCCTCC+TGG | 0.495213 | 2_3:-62473899 | Msa0305060:CDS |
| AAGATACTTGGCCAAGCAGC+AGG | 0.498578 | 2_3:-62472418 | Msa0305060:CDS |
| TCTTAAATTTAATTCCTTGG+AGG | 0.499056 | 2_3:-62472308 | Msa0305060:three_prime_UTR |
| AACACCTTCAACCTGCTGCT+TGG | 0.501873 | 2_3:+62472407 | None:intergenic |
| ACTCGTGGCCCTGTCTCCTC+CGG | 0.502107 | 2_3:+62473118 | None:intergenic |
| AGTGAAAAGCCAGGATCTGA+TGG | 0.504454 | 2_3:-62476067 | Msa0305060:CDS |
| TTACAGGGCTGTTTCGGTCA+GGG | 0.507614 | 2_3:+62473287 | None:intergenic |
| GTAGTAGTTGAAGATGATGA+AGG | 0.508383 | 2_3:+62475995 | None:intergenic |
| TGTGAATCAAACAACGTTGG+TGG | 0.511296 | 2_3:-62476278 | Msa0305060:five_prime_UTR |
| CCTGGTGGTATTCTTGCACC+TGG | 0.512639 | 2_3:-62473881 | Msa0305060:CDS |
| TTGACGTTTAAGTTTATCCA+TGG | 0.512677 | 2_3:+62473183 | None:intergenic |
| GGAAAGAAGGGAAAGATACT+TGG | 0.513511 | 2_3:-62472430 | Msa0305060:CDS |
| GAAACTGTAGCTGAAGATTG+AGG | 0.525099 | 2_3:+62475896 | None:intergenic |
| AGAAACCACCGGAGGAGACA+GGG | 0.555174 | 2_3:-62473126 | Msa0305060:CDS |
| ATTTCTAATAATATTTGTGG+TGG | 0.561543 | 2_3:-62472204 | Msa0305060:three_prime_UTR |
| ACGTCAATTAGCTGAGGCCG+AGG | 0.571515 | 2_3:-62473167 | Msa0305060:CDS |
| CGTGGCCCTGTCTCCTCCGG+TGG | 0.574776 | 2_3:+62473121 | None:intergenic |
| TTGACAGATTAGTGCCTCCA+AGG | 0.574920 | 2_3:+62472294 | None:intergenic |
| CCTTGTGTAGAAGGAAAGAA+GGG | 0.576270 | 2_3:-62472442 | Msa0305060:intron |
| AACATTGTGCATGTAAGAAG+TGG | 0.578766 | 2_3:+62475961 | None:intergenic |
| GGTGAAAGTATAATTGCCAC+TGG | 0.584183 | 2_3:-62473860 | Msa0305060:intron |
| ATCATGAGCCTAAAAGTGCA+AGG | 0.613890 | 2_3:-62473677 | Msa0305060:CDS |
| GGTTGAGTGACCTATAAAAG+TGG | 0.613901 | 2_3:-62472267 | Msa0305060:three_prime_UTR |
| TGTTACATGCGCCCTCCTGG+TGG | 0.616908 | 2_3:-62473896 | Msa0305060:CDS |
| GGAAAGTAGAGCTTGTTAGG+AGG | 0.624206 | 2_3:+62475824 | None:intergenic |
| GGGCCACGAGTAGCTGGAGA+AGG | 0.631012 | 2_3:-62473106 | Msa0305060:CDS |
| AGTCCTTCTCCAGCTACTCG+TGG | 0.642474 | 2_3:+62473103 | None:intergenic |
| GTGGCAATTATACTTTCACC+AGG | 0.648174 | 2_3:+62473863 | None:intergenic |
| CCAGGTGCAAGAATACCACC+AGG | 0.652338 | 2_3:+62473881 | None:intergenic |
| GGAAGCACGAAAGAAACCAC+CGG | 0.655389 | 2_3:-62473137 | Msa0305060:CDS |
| GTGCAAGAATACCACCAGGA+GGG | 0.659703 | 2_3:+62473885 | None:intergenic |
| ACTTAAACGTCAATTAGCTG+AGG | 0.660316 | 2_3:-62473173 | Msa0305060:CDS |
| GAAGTGGAAAGTGAAAAGCC+AGG | 0.671712 | 2_3:-62476076 | Msa0305060:CDS |
| AATTGTGAATCAAACAACGT+TGG | 0.696933 | 2_3:-62476281 | Msa0305060:five_prime_UTR |
| GGTGCAAGAATACCACCAGG+AGG | 0.743740 | 2_3:+62473884 | None:intergenic |
| AGCACGAAAGAAACCACCGG+AGG | 0.751824 | 2_3:-62473134 | Msa0305060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATGTAAAAATTGTT+AGG | - | chr2_3:62472792-62472811 | Msa0305060:intron | 10.0% |
| !!! | CTTTATTTTAAATTTTCAAA+CGG | + | chr2_3:62475550-62475569 | None:intergenic | 10.0% |
| !!! | ATTATTTTTTCTTTGTAGAT+AGG | + | chr2_3:62472895-62472914 | None:intergenic | 15.0% |
| !! | ATTATGAATAATTGAATTAG+AGG | - | chr2_3:62473019-62473038 | Msa0305060:intron | 15.0% |
| !!! | TTGAAAACAGATTTTATATT+TGG | + | chr2_3:62474935-62474954 | None:intergenic | 15.0% |
| !!! | ACATTTCAACTATATTTTTT+TGG | - | chr2_3:62475109-62475128 | Msa0305060:CDS | 15.0% |
| !!! | TGTAATAAAAATGCTGTTTT+TGG | + | chr2_3:62472140-62472159 | None:intergenic | 20.0% |
| !!! | TTTTTGTGAAATAAAGTGAT+GGG | + | chr2_3:62472194-62472213 | None:intergenic | 20.0% |
| !!! | ATGTTTTGTTTTAGTTGTTT+TGG | - | chr2_3:62472644-62472663 | Msa0305060:intron | 20.0% |
| !! | TTAAGATTTATTGTAATGAG+TGG | - | chr2_3:62472718-62472737 | Msa0305060:intron | 20.0% |
| !! | AGTAAAAGATAATACATACT+AGG | + | chr2_3:62472957-62472976 | None:intergenic | 20.0% |
| !!! | TCATAGTTTTTTTGTTTGTT+TGG | - | chr2_3:62473109-62473128 | Msa0305060:CDS | 20.0% |
| !! | TAATGACAAAAATAAGTGAA+TGG | + | chr2_3:62473325-62473344 | None:intergenic | 20.0% |
| !! | CAAATTATCATGTTATTCAT+AGG | - | chr2_3:62473415-62473434 | Msa0305060:intron | 20.0% |
| !!! | CTTCTAATTTTCAATTTTCT+AGG | + | chr2_3:62473487-62473506 | None:intergenic | 20.0% |
| !! | TGATATATAAGTGTTTGTTT+AGG | + | chr2_3:62474345-62474364 | None:intergenic | 20.0% |
| !! | TTAAACTATTTATCCAAACA+AGG | - | chr2_3:62474388-62474407 | Msa0305060:intron | 20.0% |
| !! | AAACATCATCATTAGTATTT+AGG | + | chr2_3:62474414-62474433 | None:intergenic | 20.0% |
| !! | TTTATCAGATATATACAATC+AGG | + | chr2_3:62474847-62474866 | None:intergenic | 20.0% |
| !!! | CATTTATGTTAACTAACTTT+TGG | + | chr2_3:62474884-62474903 | None:intergenic | 20.0% |
| !! | TTGAAATGTATAATCTTACA+GGG | + | chr2_3:62475098-62475117 | None:intergenic | 20.0% |
| !! | ACTAACTACTTCATTAATAA+GGG | + | chr2_3:62475468-62475487 | None:intergenic | 20.0% |
| !! | TACTAACTACTTCATTAATA+AGG | + | chr2_3:62475469-62475488 | None:intergenic | 20.0% |
| !! | ATTAATGAAGTAGTTAGTAA+AGG | - | chr2_3:62475470-62475489 | Msa0305060:intron | 20.0% |
| !!! | GTATTGTTAGTATTTTGTTT+AGG | + | chr2_3:62475518-62475537 | None:intergenic | 20.0% |
| !! | TGTTCTTAAATTTAATTCCT+TGG | - | chr2_3:62476056-62476075 | Msa0305060:CDS | 20.0% |
| !! | CTCATTTCTAATAATATTTG+TGG | - | chr2_3:62476160-62476179 | Msa0305060:five_prime_UTR | 20.0% |
| !! | ATTTCTAATAATATTTGTGG+TGG | - | chr2_3:62476163-62476182 | Msa0305060:five_prime_UTR | 20.0% |
| !! | CTTTTTGTGAAATAAAGTGA+TGG | + | chr2_3:62472195-62472214 | None:intergenic | 25.0% |
| ! | AAATGTAAAAATTGTTAGGC+CGG | - | chr2_3:62472796-62472815 | Msa0305060:intron | 25.0% |
| ! | GTTTACATAAATCTCCTAAT+CGG | + | chr2_3:62473183-62473202 | None:intergenic | 25.0% |
| ! | AACATTATCATGTTACTCAT+AGG | - | chr2_3:62473372-62473391 | Msa0305060:intron | 25.0% |
| !! | TTAGTGACTATTTTGCAATT+TGG | - | chr2_3:62473443-62473462 | Msa0305060:intron | 25.0% |
| !!! | CAAACTTTTGAAACATATGA+TGG | + | chr2_3:62473575-62473594 | None:intergenic | 25.0% |
| !!! | TTTGTTGATAATGATCATCA+TGG | - | chr2_3:62473634-62473653 | Msa0305060:intron | 25.0% |
| ! | GAGGAACTAAAAAATTGTAT+TGG | - | chr2_3:62473797-62473816 | Msa0305060:intron | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | - | chr2_3:62473800-62473819 | Msa0305060:intron | 25.0% |
| ! | TAAAAAATTGTATTGGAGGA+GGG | - | chr2_3:62473804-62473823 | Msa0305060:intron | 25.0% |
| !! | ACAAACAGATAATGTCATTT+GGG | + | chr2_3:62474046-62474065 | None:intergenic | 25.0% |
| ! | AACAAACAGATAATGTCATT+TGG | + | chr2_3:62474047-62474066 | None:intergenic | 25.0% |
| !!! | ACATTATCTGTTTGTTTTAG+AGG | - | chr2_3:62474051-62474070 | Msa0305060:intron | 25.0% |
| !! | ATTCAAAGCATTTGATAGTT+TGG | + | chr2_3:62474559-62474578 | None:intergenic | 25.0% |
| !! | ACTATCAAATGCTTTGAATT+CGG | - | chr2_3:62474560-62474579 | Msa0305060:intron | 25.0% |
| ! | TACTAATTGTCTCACAAATT+TGG | - | chr2_3:62474593-62474612 | Msa0305060:intron | 25.0% |
| ! | ATTACAAATGAAAACTACGA+AGG | + | chr2_3:62474763-62474782 | None:intergenic | 25.0% |
| ! | GTTGAAATGTATAATCTTAC+AGG | + | chr2_3:62475099-62475118 | None:intergenic | 25.0% |
| !!! | AAAAGTTTTGTTTCTTGTGA+AGG | - | chr2_3:62475161-62475180 | Msa0305060:intron | 25.0% |
| ! | TTTCAAAAACTAATGAGGAA+AGG | + | chr2_3:62475339-62475358 | None:intergenic | 25.0% |
| !!! | TTAGTATTTTGTTTAGGATG+GGG | + | chr2_3:62475512-62475531 | None:intergenic | 25.0% |
| !!! | GTTAGTATTTTGTTTAGGAT+GGG | + | chr2_3:62475513-62475532 | None:intergenic | 25.0% |
| !!! | TGTTAGTATTTTGTTTAGGA+TGG | + | chr2_3:62475514-62475533 | None:intergenic | 25.0% |
| ! | AAGTAGTTAATGAACTAGTT+AGG | - | chr2_3:62475567-62475586 | Msa0305060:intron | 25.0% |
| ! | AAATACTCTAAATGTGACAT+TGG | - | chr2_3:62475601-62475620 | Msa0305060:intron | 25.0% |
| ! | AATACTCTAAATGTGACATT+GGG | - | chr2_3:62475602-62475621 | Msa0305060:intron | 25.0% |
| ! | TTATCTACATAAATAAGCAC+TGG | - | chr2_3:62475652-62475671 | Msa0305060:intron | 25.0% |
| ! | GAGCTTATAGAAATAGTTAA+AGG | - | chr2_3:62475690-62475709 | Msa0305060:intron | 25.0% |
| ! | CGAAACAGTTATTTAGAAAA+CGG | + | chr2_3:62475900-62475919 | None:intergenic | 25.0% |
| ! | TACAAAAGATCTTTGACATA+AGG | + | chr2_3:62476036-62476055 | None:intergenic | 25.0% |
| ! | TCTTAAATTTAATTCCTTGG+AGG | - | chr2_3:62476059-62476078 | Msa0305060:CDS | 25.0% |
| AATTGTGAATCAAACAACGT+TGG | - | chr2_3:62472086-62472105 | Msa0305060:three_prime_UTR | 30.0% | |
| ! | TTGTGGAAGATGGATTTATT+TGG | + | chr2_3:62472167-62472186 | None:intergenic | 30.0% |
| !! | ACTTTTGTAGAATGCCATTT+TGG | - | chr2_3:62472334-62472353 | Msa0305060:three_prime_UTR | 30.0% |
| AGTTTGAAGAAACACATACA+AGG | + | chr2_3:62472567-62472586 | None:intergenic | 30.0% | |
| ! | AACTGATTCTGATTAATGTG+TGG | - | chr2_3:62473200-62473219 | Msa0305060:intron | 30.0% |
| !!! | TTTTGTTTTGAAGATGAACC+TGG | - | chr2_3:62473223-62473242 | Msa0305060:intron | 30.0% |
| ! | TGCTTTCTCAATTTTCGAAT+GGG | + | chr2_3:62473534-62473553 | None:intergenic | 30.0% |
| ! | ATGCTTTCTCAATTTTCGAA+TGG | + | chr2_3:62473535-62473554 | None:intergenic | 30.0% |
| !! | AATTGAGAAAGCATTCATCT+TGG | - | chr2_3:62473541-62473560 | Msa0305060:intron | 30.0% |
| !! | ATTGAGAAAGCATTCATCTT+GGG | - | chr2_3:62473542-62473561 | Msa0305060:intron | 30.0% |
| !!! | TGCTATTTTGACTAGTTGAT+AGG | - | chr2_3:62473603-62473622 | Msa0305060:intron | 30.0% |
| GGAAAAAAAGAATAAGCAAG+TGG | - | chr2_3:62473698-62473717 | Msa0305060:CDS | 30.0% | |
| TGGAAGAAATAGAGGAAAAT+GGG | - | chr2_3:62473718-62473737 | Msa0305060:CDS | 30.0% | |
| !!! | TTTTTTAGTTCCTCCAAATG+AGG | + | chr2_3:62473791-62473810 | None:intergenic | 30.0% |
| CTAAAAAATTGTATTGGAGG+AGG | - | chr2_3:62473803-62473822 | Msa0305060:intron | 30.0% | |
| !!! | TCTGTTTGTTTTAGAGGTAA+TGG | - | chr2_3:62474057-62474076 | Msa0305060:intron | 30.0% |
| ! | ACTGTTTTCTTAAGCTATCA+TGG | + | chr2_3:62474259-62474278 | None:intergenic | 30.0% |
| !! | ATTAGTATTTAGGCCTTGTT+TGG | + | chr2_3:62474404-62474423 | None:intergenic | 30.0% |
| ! | TTTGGTAACACAAGTTTAGA+AGG | + | chr2_3:62474541-62474560 | None:intergenic | 30.0% |
| TTTGTGAGACAATTAGTAAG+AGG | + | chr2_3:62474591-62474610 | None:intergenic | 30.0% | |
| ATAAATGCTGATCAAGTTCT+TGG | - | chr2_3:62474897-62474916 | Msa0305060:intron | 30.0% | |
| ! | TTGACGTTTAAGTTTATCCA+TGG | + | chr2_3:62475187-62475206 | None:intergenic | 30.0% |
| !! | AAGGACTTGTTATAGATGAA+TGG | - | chr2_3:62475280-62475299 | Msa0305060:intron | 30.0% |
| !! | AGGACTTGTTATAGATGAAT+GGG | - | chr2_3:62475281-62475300 | Msa0305060:intron | 30.0% |
| ! | GGAGTTTTCAAAAACTAATG+AGG | + | chr2_3:62475344-62475363 | None:intergenic | 30.0% |
| GATACTTAATATGAGACGAA+GGG | + | chr2_3:62475365-62475384 | None:intergenic | 30.0% | |
| AATGAAGTAGTTAGTAAAGG+AGG | - | chr2_3:62475473-62475492 | Msa0305060:intron | 30.0% | |
| ATACTCTAAATGTGACATTG+GGG | - | chr2_3:62475603-62475622 | Msa0305060:intron | 30.0% | |
| !! | ACTATTTCTATAAGCTCTCT+CGG | + | chr2_3:62475687-62475706 | None:intergenic | 30.0% |
| ACAGTTATTTAGAAAACGGA+AGG | + | chr2_3:62475896-62475915 | None:intergenic | 30.0% | |
| !! | TCTCTTCATACCACTTTTAT+AGG | + | chr2_3:62476113-62476132 | None:intergenic | 30.0% |
| !!! | ATAAAGTGATGGGTCTTTTG+TGG | + | chr2_3:62472184-62472203 | None:intergenic | 35.0% |
| AATTGAAGTTTCCGGCAAAT+GGG | + | chr2_3:62472245-62472264 | None:intergenic | 35.0% | |
| AAATTGAAGTTTCCGGCAAA+TGG | + | chr2_3:62472246-62472265 | None:intergenic | 35.0% | |
| !! | TTGTGACTTGTTTGCCAAAA+TGG | + | chr2_3:62472351-62472370 | None:intergenic | 35.0% |
| GTAGTAGTTGAAGATGATGA+AGG | + | chr2_3:62472375-62472394 | None:intergenic | 35.0% | |
| AACATTGTGCATGTAAGAAG+TGG | + | chr2_3:62472409-62472428 | None:intergenic | 35.0% | |
| CTAAATCTTTGCTTCCTACT+AGG | - | chr2_3:62472502-62472521 | Msa0305060:intron | 35.0% | |
| !!! | AGTTGTTTTGGTCTCAAGTA+TGG | - | chr2_3:62472656-62472675 | Msa0305060:intron | 35.0% |
| !! | TTCATAAGTTCTAGTTCGAC+TGG | - | chr2_3:62472765-62472784 | Msa0305060:intron | 35.0% |
| TTGTGTGTGTGAGTTTCTAT+TGG | - | chr2_3:62472855-62472874 | Msa0305060:intron | 35.0% | |
| AGCCCAAGAATCGATTAATT+TGG | - | chr2_3:62473145-62473164 | Msa0305060:CDS | 35.0% | |
| GCCCAAGAATCGATTAATTT+GGG | - | chr2_3:62473146-62473165 | Msa0305060:CDS | 35.0% | |
| ! | CCCCAAATTAATCGATTCTT+GGG | + | chr2_3:62473150-62473169 | None:intergenic | 35.0% |
| ! | CCCAAGAATCGATTAATTTG+GGG | - | chr2_3:62473147-62473166 | Msa0305060:CDS | 35.0% |
| ! | TCCCCAAATTAATCGATTCT+TGG | + | chr2_3:62473151-62473170 | None:intergenic | 35.0% |
| ACATAAATCTCCTAATCGGT+GGG | + | chr2_3:62473179-62473198 | None:intergenic | 35.0% | |
| TACATAAATCTCCTAATCGG+TGG | + | chr2_3:62473180-62473199 | None:intergenic | 35.0% | |
| !! | TTGAGAAAGCATTCATCTTG+GGG | - | chr2_3:62473543-62473562 | Msa0305060:intron | 35.0% |
| TAAGCAAGTGGAAGAAATAG+AGG | - | chr2_3:62473710-62473729 | Msa0305060:CDS | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | - | chr2_3:62473717-62473736 | Msa0305060:CDS | 35.0% | |
| AATACAAAACCCTCCTCATT+TGG | - | chr2_3:62473775-62473794 | Msa0305060:intron | 35.0% | |
| !! | ATGTCATTTGGGCTTTGTTT+GGG | + | chr2_3:62474035-62474054 | None:intergenic | 35.0% |
| !! | AATGTCATTTGGGCTTTGTT+TGG | + | chr2_3:62474036-62474055 | None:intergenic | 35.0% |
| ! | ACACATCTGAGCTTTTCTAT+TGG | - | chr2_3:62474143-62474162 | Msa0305060:intron | 35.0% |
| AATAAGCTGAAAACGTCTTG+TGG | + | chr2_3:62474224-62474243 | None:intergenic | 35.0% | |
| !! | AACTTTTAGGTGCAGTTGTT+TGG | + | chr2_3:62474452-62474471 | None:intergenic | 35.0% |
| AACCAACTGATCAAAAAAGC+AGG | - | chr2_3:62474655-62474674 | Msa0305060:intron | 35.0% | |
| ACCAACTGATCAAAAAAGCA+GGG | - | chr2_3:62474656-62474675 | Msa0305060:intron | 35.0% | |
| ! | CAATTTGCTTAGCAACAGAA+AGG | + | chr2_3:62474817-62474836 | None:intergenic | 35.0% |
| TAGCTGTAGAGCAAATTCTT+CGG | - | chr2_3:62475043-62475062 | Msa0305060:intron | 35.0% | |
| !!! | AATTCTTCGGGTTGTTTTTC+TGG | - | chr2_3:62475056-62475075 | Msa0305060:intron | 35.0% |
| ATAATCTTACAGGGCTGTTT+CGG | + | chr2_3:62475089-62475108 | None:intergenic | 35.0% | |
| ACTTAAACGTCAATTAGCTG+AGG | - | chr2_3:62475194-62475213 | Msa0305060:intron | 35.0% | |
| CGATACTTAATATGAGACGA+AGG | + | chr2_3:62475366-62475385 | None:intergenic | 35.0% | |
| TACTCTAAATGTGACATTGG+GGG | - | chr2_3:62475604-62475623 | Msa0305060:intron | 35.0% | |
| !! | GCTGTTTTCATAAGCTATCT+TGG | + | chr2_3:62475756-62475775 | None:intergenic | 35.0% |
| GGTCAGAAGAAAAAAGAAAC+AGG | + | chr2_3:62476015-62476034 | None:intergenic | 35.0% | |
| AGGCACTAATCTGTCAATTA+TGG | - | chr2_3:62476079-62476098 | Msa0305060:CDS | 35.0% | |
| CATAGCTATCTACAAGTTGT+AGG | + | chr2_3:62476253-62476272 | None:intergenic | 35.0% | |
| TGTGAATCAAACAACGTTGG+TGG | - | chr2_3:62472089-62472108 | Msa0305060:three_prime_UTR | 40.0% | |
| TTGCCGGAAACTTCAATTTC+CGG | - | chr2_3:62472247-62472266 | Msa0305060:three_prime_UTR | 40.0% | |
| TCACCGGAAATTGAAGTTTC+CGG | + | chr2_3:62472253-62472272 | None:intergenic | 40.0% | |
| TTCAATTTCCGGTGAGATTC+CGG | - | chr2_3:62472258-62472277 | Msa0305060:three_prime_UTR | 40.0% | |
| !!! | TTCCACTTCCATTTTTTCGC+CGG | + | chr2_3:62472280-62472299 | None:intergenic | 40.0% |
| ! | CAAACTTTTCCATCAGATCC+TGG | + | chr2_3:62472312-62472331 | None:intergenic | 40.0% |
| CAGGATCTGATGGAAAAGTT+TGG | - | chr2_3:62472310-62472329 | Msa0305060:three_prime_UTR | 40.0% | |
| GAAACTGTAGCTGAAGATTG+AGG | + | chr2_3:62472474-62472493 | None:intergenic | 40.0% | |
| ! | CAAGGAAAGTAGAGCTTGTT+AGG | + | chr2_3:62472549-62472568 | None:intergenic | 40.0% |
| TGGTCTCAAGTATGGTGAAT+AGG | - | chr2_3:62472664-62472683 | Msa0305060:intron | 40.0% | |
| TAGAAACTCACACACACAAG+TGG | + | chr2_3:62472854-62472873 | None:intergenic | 40.0% | |
| ATGAACCTGGTAAGCAAGTT+AGG | - | chr2_3:62473236-62473255 | Msa0305060:intron | 40.0% | |
| CAAGTCTCATGTAGCTTTCA+AGG | - | chr2_3:62473285-62473304 | Msa0305060:intron | 40.0% | |
| !! | CATGGCTTTGTTTGCAAGTT+TGG | - | chr2_3:62473652-62473671 | Msa0305060:CDS | 40.0% |
| !! | GCTTTGTTTGCAAGTTTGGA+GGG | - | chr2_3:62473656-62473675 | Msa0305060:CDS | 40.0% |
| ! | CTTTGTTTGCAAGTTTGGAG+GGG | - | chr2_3:62473657-62473676 | Msa0305060:CDS | 40.0% |
| GAAATAGAGGAAAATGGGAG+AGG | - | chr2_3:62473723-62473742 | Msa0305060:CDS | 40.0% | |
| TTAGTTCCTCCAAATGAGGA+GGG | + | chr2_3:62473787-62473806 | None:intergenic | 40.0% | |
| ! | TTTAGTTCCTCCAAATGAGG+AGG | + | chr2_3:62473788-62473807 | None:intergenic | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | - | chr2_3:62473810-62473829 | Msa0305060:intron | 40.0% |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | - | chr2_3:62473811-62473830 | Msa0305060:intron | 40.0% |
| ! | TTTGAGGGGTGCAAAATAAG+AGG | + | chr2_3:62473985-62474004 | None:intergenic | 40.0% |
| ! | AAGGAAAGGAAAGGCTTTGA+GGG | + | chr2_3:62474000-62474019 | None:intergenic | 40.0% |
| ACTCTTTAGATCGCTGCTAT+GGG | - | chr2_3:62474107-62474126 | Msa0305060:intron | 40.0% | |
| GTGGCAATTATACTTTCACC+AGG | + | chr2_3:62474507-62474526 | None:intergenic | 40.0% | |
| ! | GGTGAAAGTATAATTGCCAC+TGG | - | chr2_3:62474507-62474526 | Msa0305060:intron | 40.0% |
| TTAGAAGGCGATATTACCAG+TGG | + | chr2_3:62474526-62474545 | None:intergenic | 40.0% | |
| !! | GTTGGTTTCTCGTTGTTTTC+TGG | + | chr2_3:62474642-62474661 | None:intergenic | 40.0% |
| !!! | ACCCTGCTTTTTTGATCAGT+TGG | + | chr2_3:62474660-62474679 | None:intergenic | 40.0% |
| ! | ATCATGAGCCTAAAAGTGCA+AGG | - | chr2_3:62474690-62474709 | Msa0305060:intron | 40.0% |
| ! | CCATTTCACCTTGCACTTTT+AGG | + | chr2_3:62474701-62474720 | None:intergenic | 40.0% |
| ! | CCTAAAAGTGCAAGGTGAAA+TGG | - | chr2_3:62474698-62474717 | Msa0305060:intron | 40.0% |
| !! | AATGGACTATGTACCAGAAC+TGG | - | chr2_3:62474716-62474735 | Msa0305060:intron | 40.0% |
| AAATGGCACATTACCAGTTC+TGG | + | chr2_3:62474732-62474751 | None:intergenic | 40.0% | |
| !! | CTACGAAGGTTGATGAGAAA+TGG | + | chr2_3:62474749-62474768 | None:intergenic | 40.0% |
| AGCTGTAGAGCAAATTCTTC+GGG | - | chr2_3:62475044-62475063 | Msa0305060:intron | 40.0% | |
| ! | TTTGTTTCTTGTGAAGGCCA+TGG | - | chr2_3:62475167-62475186 | Msa0305060:intron | 40.0% |
| GTAGTTAGTAAAGGAGGTCA+AGG | - | chr2_3:62475479-62475498 | Msa0305060:intron | 40.0% | |
| TTCGTTGTTCCTTGTGTAGA+AGG | - | chr2_3:62475916-62475935 | Msa0305060:CDS | 40.0% | |
| TCCTTGTGTAGAAGGAAAGA+AGG | - | chr2_3:62475924-62475943 | Msa0305060:CDS | 40.0% | |
| CCTTGTGTAGAAGGAAAGAA+GGG | - | chr2_3:62475925-62475944 | Msa0305060:CDS | 40.0% | |
| GGAAAGAAGGGAAAGATACT+TGG | - | chr2_3:62475937-62475956 | Msa0305060:CDS | 40.0% | |
| GGTTGAGTGACCTATAAAAG+TGG | - | chr2_3:62476100-62476119 | Msa0305060:exon | 40.0% | |
| ! | GATGGGTCTTTTGTGGAAGA+TGG | + | chr2_3:62472177-62472196 | None:intergenic | 45.0% |
| GGCAAATGGGTCGTTGAATT+GGG | + | chr2_3:62472232-62472251 | None:intergenic | 45.0% | |
| CAATTCAACGACCCATTTGC+CGG | - | chr2_3:62472231-62472250 | Msa0305060:three_prime_UTR | 45.0% | |
| !!! | TTTTTTCGCCGGAATCTCAC+CGG | + | chr2_3:62472269-62472288 | None:intergenic | 45.0% |
| GTGAGATTCCGGCGAAAAAA+TGG | - | chr2_3:62472269-62472288 | Msa0305060:three_prime_UTR | 45.0% | |
| TTCCGGCGAAAAAATGGAAG+TGG | - | chr2_3:62472275-62472294 | Msa0305060:three_prime_UTR | 45.0% | |
| GAAGTGGAAAGTGAAAAGCC+AGG | - | chr2_3:62472291-62472310 | Msa0305060:three_prime_UTR | 45.0% | |
| AGTGAAAAGCCAGGATCTGA+TGG | - | chr2_3:62472300-62472319 | Msa0305060:three_prime_UTR | 45.0% | |
| AGACGAAGTCTTCTCCTAGT+AGG | + | chr2_3:62472519-62472538 | None:intergenic | 45.0% | |
| !! | GGAAAGTAGAGCTTGTTAGG+AGG | + | chr2_3:62472546-62472565 | None:intergenic | 45.0% |
| TTGTGACTGAGGTTTGAACC+CGG | - | chr2_3:62472822-62472841 | Msa0305060:intron | 45.0% | |
| CTCATGTAGCTTTCAAGGTC+TGG | - | chr2_3:62473290-62473309 | Msa0305060:intron | 45.0% | |
| !! | GGCTTTGTTTGCAAGTTTGG+AGG | - | chr2_3:62473655-62473674 | Msa0305060:CDS | 45.0% |
| TTTGCAAGTTTGGAGGGGAA+GGG | - | chr2_3:62473662-62473681 | Msa0305060:CDS | 45.0% | |
| ATAGAGGAAAATGGGAGAGG+AGG | - | chr2_3:62473726-62473745 | Msa0305060:CDS | 45.0% | |
| TAGAGGAAAATGGGAGAGGA+GGG | - | chr2_3:62473727-62473746 | Msa0305060:CDS | 45.0% | |
| ACAAAACCCTCCTCATTTGG+AGG | - | chr2_3:62473778-62473797 | Msa0305060:intron | 45.0% | |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | - | chr2_3:62473812-62473831 | Msa0305060:intron | 45.0% |
| !! | AGGAAAGGAAAGGCTTTGAG+GGG | + | chr2_3:62473999-62474018 | None:intergenic | 45.0% |
| GAAGGAAAGGAAAGGCTTTG+AGG | + | chr2_3:62474001-62474020 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr2_3:62474023-62474042 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr2_3:62474024-62474043 | None:intergenic | 45.0% |
| !! | TTGGGCTTTGTTTGGGAGTT+TGG | + | chr2_3:62474028-62474047 | None:intergenic | 45.0% |
| CATAGCAGCGATCTAAAGAG+TGG | + | chr2_3:62474108-62474127 | None:intergenic | 45.0% | |
| CACTCTTTAGATCGCTGCTA+TGG | - | chr2_3:62474106-62474125 | Msa0305060:intron | 45.0% | |
| ! | GGGCGCATGTAACAACTTTT+AGG | + | chr2_3:62474465-62474484 | None:intergenic | 45.0% |
| !! | GGTTTCTCGTTGTTTTCTGG+TGG | + | chr2_3:62474639-62474658 | None:intergenic | 45.0% |
| ! | ACATTGGGGGCTTGTTTGAA+TGG | - | chr2_3:62475617-62475636 | Msa0305060:intron | 45.0% |
| CCCTTCTTTCCTTCTACACA+AGG | + | chr2_3:62475928-62475947 | None:intergenic | 45.0% | |
| TTGACAGATTAGTGCCTCCA+AGG | + | chr2_3:62476076-62476095 | None:intergenic | 45.0% | |
| CGGCAAATGGGTCGTTGAAT+TGG | + | chr2_3:62472233-62472252 | None:intergenic | 50.0% | |
| CAAACCTCAGTCACAACGTC+CGG | + | chr2_3:62472818-62472837 | None:intergenic | 50.0% | |
| TGTGACTGAGGTTTGAACCC+GGG | - | chr2_3:62472823-62472842 | Msa0305060:intron | 50.0% | |
| !! | GCACTCCTAACTTGCTTACC+AGG | + | chr2_3:62473244-62473263 | None:intergenic | 50.0% |
| GTTTGCAAGTTTGGAGGGGA+AGG | - | chr2_3:62473661-62473680 | Msa0305060:CDS | 50.0% | |
| AAAATGGGAGAGGAGGGCTT+TGG | - | chr2_3:62473733-62473752 | Msa0305060:CDS | 50.0% | |
| AAATGGGAGAGGAGGGCTTT+GGG | - | chr2_3:62473734-62473753 | Msa0305060:CDS | 50.0% | |
| !! | GTATTGGAGGAGGGTTTTGG+GGG | - | chr2_3:62473813-62473832 | Msa0305060:intron | 50.0% |
| !!! | TATTGGAGGAGGGTTTTGGG+GGG | - | chr2_3:62473814-62473833 | Msa0305060:intron | 50.0% |
| TTGGAGGGGAAGGAAAGGAA+AGG | + | chr2_3:62474009-62474028 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr2_3:62474025-62474044 | None:intergenic | 50.0% |
| GTGCAAGAATACCACCAGGA+GGG | + | chr2_3:62474485-62474504 | None:intergenic | 50.0% | |
| CTCTTTGCTCGTCAAACTGC+AGG | + | chr2_3:62475017-62475036 | None:intergenic | 50.0% | |
| ! | TTACAGGGCTGTTTCGGTCA+GGG | + | chr2_3:62475083-62475102 | None:intergenic | 50.0% |
| ! | GGAAGCACGAAAGAAACCAC+CGG | - | chr2_3:62475230-62475249 | Msa0305060:intron | 50.0% |
| AAGATACTTGGCCAAGCAGC+AGG | - | chr2_3:62475949-62475968 | Msa0305060:CDS | 50.0% | |
| AACACCTTCAACCTGCTGCT+TGG | + | chr2_3:62475963-62475982 | None:intergenic | 50.0% | |
| ACACACAAGTGGAGAAGCCC+GGG | + | chr2_3:62472843-62472862 | None:intergenic | 55.0% | |
| CACACACAAGTGGAGAAGCC+CGG | + | chr2_3:62472844-62472863 | None:intergenic | 55.0% | |
| ! | GGGGACTAATCCCACCGATT+AGG | - | chr2_3:62473166-62473185 | Msa0305060:CDS | 55.0% |
| CAAGTTTGGAGGGGAAGGGA+GGG | - | chr2_3:62473666-62473685 | Msa0305060:CDS | 55.0% | |
| AAGTTTGGAGGGGAAGGGAG+GGG | - | chr2_3:62473667-62473686 | Msa0305060:CDS | 55.0% | |
| AATGGGAGAGGAGGGCTTTG+GGG | - | chr2_3:62473735-62473754 | Msa0305060:CDS | 55.0% | |
| !!! | AGGAGGGTTTTGGGGGGTTT+TGG | - | chr2_3:62473820-62473839 | Msa0305060:intron | 55.0% |
| !!! | AGGGTTTTGGGGGGTTTTGG+AGG | - | chr2_3:62473823-62473842 | Msa0305060:intron | 55.0% |
| !!! | GGGTTTTGGGGGGTTTTGGA+GGG | - | chr2_3:62473824-62473843 | Msa0305060:intron | 55.0% |
| GGAGTTTGGAGGGGAAGGAA+AGG | + | chr2_3:62474014-62474033 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | + | chr2_3:62474019-62474038 | None:intergenic | 55.0% | |
| AGTTGTTACATGCGCCCTCC+TGG | - | chr2_3:62474468-62474487 | Msa0305060:intron | 55.0% | |
| GGTGCAAGAATACCACCAGG+AGG | + | chr2_3:62474486-62474505 | None:intergenic | 55.0% | |
| CCAGGTGCAAGAATACCACC+AGG | + | chr2_3:62474489-62474508 | None:intergenic | 55.0% | |
| CCTGGTGGTATTCTTGCACC+TGG | - | chr2_3:62474486-62474505 | Msa0305060:intron | 55.0% | |
| ! | CTTACAGGGCTGTTTCGGTC+AGG | + | chr2_3:62475084-62475103 | None:intergenic | 55.0% |
| ACGTCAATTAGCTGAGGCCG+AGG | - | chr2_3:62475200-62475219 | Msa0305060:intron | 55.0% | |
| TCGTGCTTCCAATGCAGCCT+CGG | + | chr2_3:62475220-62475239 | None:intergenic | 55.0% | |
| AGCACGAAAGAAACCACCGG+AGG | - | chr2_3:62475233-62475252 | Msa0305060:intron | 55.0% | |
| AAGAAACCACCGGAGGAGAC+AGG | - | chr2_3:62475240-62475259 | Msa0305060:intron | 55.0% | |
| AGAAACCACCGGAGGAGACA+GGG | - | chr2_3:62475241-62475260 | Msa0305060:intron | 55.0% | |
| AGTCCTTCTCCAGCTACTCG+TGG | + | chr2_3:62475267-62475286 | None:intergenic | 55.0% | |
| ! | TTGGCCAAGCAGCAGGTTGA+AGG | - | chr2_3:62475956-62475975 | Msa0305060:CDS | 55.0% |
| TAGGCCGGACGTTGTGACTG+AGG | - | chr2_3:62472811-62472830 | Msa0305060:intron | 60.0% | |
| GCAAGTTTGGAGGGGAAGGG+AGG | - | chr2_3:62473665-62473684 | Msa0305060:CDS | 60.0% | |
| ! | ATGGGAGAGGAGGGCTTTGG+GGG | - | chr2_3:62473736-62473755 | Msa0305060:CDS | 60.0% |
| TGTTACATGCGCCCTCCTGG+TGG | - | chr2_3:62474471-62474490 | Msa0305060:intron | 60.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | - | chr2_3:62473671-62473690 | Msa0305060:CDS | 65.0% | |
| GGGAAGGGAGGGGAAGGCTT+GGG | - | chr2_3:62473677-62473696 | Msa0305060:CDS | 65.0% | |
| !! | TGGGAGAGGAGGGCTTTGGG+GGG | - | chr2_3:62473737-62473756 | Msa0305060:CDS | 65.0% |
| AGCTGAGGCCGAGGCTGCAT+TGG | - | chr2_3:62475209-62475228 | Msa0305060:intron | 65.0% | |
| ACTCGTGGCCCTGTCTCCTC+CGG | + | chr2_3:62475252-62475271 | None:intergenic | 65.0% | |
| GAGACAGGGCCACGAGTAGC+TGG | - | chr2_3:62475255-62475274 | Msa0305060:intron | 65.0% | |
| GGGCCACGAGTAGCTGGAGA+AGG | - | chr2_3:62475261-62475280 | Msa0305060:intron | 65.0% | |
| GGGGAAGGGAGGGGAAGGCT+TGG | - | chr2_3:62473676-62473695 | Msa0305060:CDS | 70.0% | |
| CGTGGCCCTGTCTCCTCCGG+TGG | + | chr2_3:62475249-62475268 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 62472082 | 62476307 | 62472082 | ID=Msa0305060;Name=Msa0305060 |
| chr2_3 | mRNA | 62472082 | 62476307 | 62472082 | ID=Msa0305060-mRNA-1;Parent=Msa0305060;Name=Msa0305060-mRNA-1;_AED=0.06;_eAED=0.06;_QI=206|1|1|1|1|1|7|307|271 |
| chr2_3 | exon | 62472082 | 62472454 | 62472082 | ID=Msa0305060-mRNA-1:exon:20825;Parent=Msa0305060-mRNA-1 |
| chr2_3 | exon | 62473087 | 62473206 | 62473087 | ID=Msa0305060-mRNA-1:exon:20824;Parent=Msa0305060-mRNA-1 |
| chr2_3 | exon | 62473291 | 62473368 | 62473291 | ID=Msa0305060-mRNA-1:exon:20823;Parent=Msa0305060-mRNA-1 |
| chr2_3 | exon | 62473652 | 62473770 | 62473652 | ID=Msa0305060-mRNA-1:exon:20822;Parent=Msa0305060-mRNA-1 |
| chr2_3 | exon | 62473861 | 62473942 | 62473861 | ID=Msa0305060-mRNA-1:exon:20821;Parent=Msa0305060-mRNA-1 |
| chr2_3 | exon | 62475083 | 62475153 | 62475083 | ID=Msa0305060-mRNA-1:exon:20820;Parent=Msa0305060-mRNA-1 |
| chr2_3 | exon | 62475822 | 62476307 | 62475822 | ID=Msa0305060-mRNA-1:exon:20819;Parent=Msa0305060-mRNA-1 |
| chr2_3 | five_prime_UTR | 62476102 | 62476307 | 62476102 | ID=Msa0305060-mRNA-1:five_prime_utr;Parent=Msa0305060-mRNA-1 |
| chr2_3 | CDS | 62475822 | 62476101 | 62475822 | ID=Msa0305060-mRNA-1:cds;Parent=Msa0305060-mRNA-1 |
| chr2_3 | CDS | 62475083 | 62475153 | 62475083 | ID=Msa0305060-mRNA-1:cds;Parent=Msa0305060-mRNA-1 |
| chr2_3 | CDS | 62473861 | 62473942 | 62473861 | ID=Msa0305060-mRNA-1:cds;Parent=Msa0305060-mRNA-1 |
| chr2_3 | CDS | 62473652 | 62473770 | 62473652 | ID=Msa0305060-mRNA-1:cds;Parent=Msa0305060-mRNA-1 |
| chr2_3 | CDS | 62473291 | 62473368 | 62473291 | ID=Msa0305060-mRNA-1:cds;Parent=Msa0305060-mRNA-1 |
| chr2_3 | CDS | 62473087 | 62473206 | 62473087 | ID=Msa0305060-mRNA-1:cds;Parent=Msa0305060-mRNA-1 |
| chr2_3 | CDS | 62472389 | 62472454 | 62472389 | ID=Msa0305060-mRNA-1:cds;Parent=Msa0305060-mRNA-1 |
| chr2_3 | three_prime_UTR | 62472082 | 62472388 | 62472082 | ID=Msa0305060-mRNA-1:three_prime_utr;Parent=Msa0305060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
