Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261530 | XP_013465025.1 | 99.631 | 271 | 1 | 0 | 1 | 271 | 1 | 271 | 0.0 | 559 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261530 | sp|Q8VYN2|VAP42_ARATH | 64.310 | 297 | 78 | 4 | 1 | 271 | 1 | 295 | 3.97e-127 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261530 | B7FKV5 | 99.631 | 271 | 1 | 0 | 1 | 271 | 1 | 271 | 0.0 | 559 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035980 | Msa0261530 | -0.800250 | 1.573902e-48 | -8.615850e-47 |
| Msa0036060 | Msa0261530 | -0.810569 | 1.080027e-50 | -8.615850e-47 |
| Msa0083980 | Msa0261530 | -0.812749 | 3.624985e-51 | -8.615850e-47 |
| Msa0227830 | Msa0261530 | 0.967850 | 7.546552e-128 | -8.615850e-47 |
| Msa0261530 | Msa0305060 | 0.930696 | 1.124237e-93 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261530 | MtrunA17_Chr2g0323731 | 99.631 | 271 | 1 | 0 | 1 | 271 | 1 | 271 | 0.0 | 559 |
| Msa0261530 | MtrunA17_Chr4g0048491 | 67.897 | 271 | 82 | 3 | 1 | 271 | 1 | 266 | 4.92e-123 | 351 |
| Msa0261530 | MtrunA17_Chr2g0318581 | 64.504 | 262 | 63 | 4 | 6 | 266 | 8 | 240 | 2.38e-108 | 313 |
| Msa0261530 | MtrunA17_Chr7g0230901 | 31.148 | 122 | 77 | 2 | 87 | 205 | 11 | 128 | 4.14e-11 | 61.6 |
| Msa0261530 | MtrunA17_Chr5g0399141 | 31.967 | 122 | 76 | 2 | 87 | 205 | 13 | 130 | 6.04e-11 | 61.2 |
| Msa0261530 | MtrunA17_Chr4g0056231 | 32.773 | 119 | 73 | 2 | 87 | 202 | 12 | 126 | 6.40e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261530 | AT4G21450.1 | 64.310 | 297 | 78 | 4 | 1 | 271 | 1 | 295 | 4.04e-128 | 365 |
| Msa0261530 | AT4G21450.3 | 60.127 | 316 | 79 | 5 | 1 | 271 | 1 | 314 | 3.26e-122 | 351 |
| Msa0261530 | AT5G54110.1 | 69.565 | 253 | 69 | 3 | 16 | 266 | 16 | 262 | 7.49e-107 | 310 |
| Msa0261530 | AT4G05060.1 | 58.719 | 281 | 97 | 4 | 1 | 262 | 1 | 281 | 8.33e-100 | 293 |
| Msa0261530 | AT4G21450.2 | 59.048 | 210 | 60 | 3 | 1 | 184 | 1 | 210 | 2.24e-74 | 226 |
| Msa0261530 | AT5G54110.2 | 59.890 | 182 | 66 | 3 | 4 | 184 | 5 | 180 | 2.43e-53 | 172 |
Find 74 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATTTCCGGTGAGATTC+CGG | 0.211669 | 2_2:+59976730 | Msa0261530:five_prime_UTR |
| TTGCCGGAAACTTCAATTTC+CGG | 0.244323 | 2_2:+59976719 | Msa0261530:five_prime_UTR |
| CGGCAAATGGGTCGTTGAAT+TGG | 0.258021 | 2_2:-59976702 | None:intergenic |
| TTGTGACTTGTTTGCCAAAA+TGG | 0.267547 | 2_2:-59976820 | None:intergenic |
| ATCTCTTCATACCACTTTAT+AGG | 0.277347 | 2_2:-59980572 | None:intergenic |
| TCACCGGAAATTGAAGTTTC+CGG | 0.278752 | 2_2:-59976722 | None:intergenic |
| AGGCACTAATCTGTCAATTA+TGG | 0.308763 | 2_2:+59980541 | Msa0261530:three_prime_UTR |
| CAAGGAAAGTAGAGCTTGTT+AGG | 0.313060 | 2_2:-59977018 | None:intergenic |
| CAAGTCTCATGTAGCTTTCA+AGG | 0.338891 | 2_2:+59977756 | Msa0261530:CDS |
| TGTTCTTAAATTTAATTCCT+TGG | 0.346163 | 2_2:+59980518 | Msa0261530:three_prime_UTR |
| ATGAACCTGGTAAGCAAGTT+AGG | 0.348697 | 2_2:+59977707 | Msa0261530:CDS |
| TTGTGGAAGATGGATTTATT+TGG | 0.357321 | 2_2:-59976636 | None:intergenic |
| AAATTGAAGTTTCCGGCAAA+TGG | 0.358528 | 2_2:-59976715 | None:intergenic |
| CAATTCAACGACCCATTTGC+CGG | 0.374352 | 2_2:+59976703 | Msa0261530:five_prime_UTR |
| CTCATTTCTAATAATATTTG+TGG | 0.376855 | 2_2:+59980621 | Msa0261530:three_prime_UTR |
| AAATGGCACATTACCAGTTC+TGG | 0.385154 | 2_2:-59979200 | None:intergenic |
| CTTACAGGGCTGTTTCGGTC+AGG | 0.389728 | 2_2:-59979552 | None:intergenic |
| GGCAAATGGGTCGTTGAATT+GGG | 0.392317 | 2_2:-59976701 | None:intergenic |
| CATAGCTATCTACAAGTTGT+AGG | 0.392403 | 2_2:-59980711 | None:intergenic |
| ATAATCTTACAGGGCTGTTT+CGG | 0.396911 | 2_2:-59979557 | None:intergenic |
| AGCTGTAGAGCAAATTCTTC+GGG | 0.398279 | 2_2:+59979515 | Msa0261530:CDS |
| AAGGACTTGTTATAGATGAA+TGG | 0.401395 | 2_2:+59979751 | Msa0261530:CDS |
| GAGACAGGGCCACGAGTAGC+TGG | 0.404871 | 2_2:+59979726 | Msa0261530:CDS |
| CCTAAAAGTGCAAGGTGAAA+TGG | 0.412866 | 2_2:+59979169 | Msa0261530:CDS |
| GCACTCCTAACTTGCTTACC+AGG | 0.419468 | 2_2:-59977712 | None:intergenic |
| AAGAAACCACCGGAGGAGAC+AGG | 0.419468 | 2_2:+59979711 | Msa0261530:CDS |
| CTAAATCTTTGCTTCCTACT+AGG | 0.428995 | 2_2:+59976974 | Msa0261530:CDS |
| CAGGATCTGATGGAAAAGTT+TGG | 0.433561 | 2_2:+59976782 | Msa0261530:CDS |
| AGGACTTGTTATAGATGAAT+GGG | 0.451585 | 2_2:+59979752 | Msa0261530:CDS |
| TCCTTGTGTAGAAGGAAAGA+AGG | 0.456645 | 2_2:+59980386 | Msa0261530:intron |
| AGCTGAGGCCGAGGCTGCAT+TGG | 0.458362 | 2_2:+59979680 | Msa0261530:CDS |
| AATTGAAGTTTCCGGCAAAT+GGG | 0.458853 | 2_2:-59976714 | None:intergenic |
| TAGCTGTAGAGCAAATTCTT+CGG | 0.461589 | 2_2:+59979514 | Msa0261530:CDS |
| TACAAAAGATCTTTGACATA+AGG | 0.467380 | 2_2:-59980495 | None:intergenic |
| AATGGACTATGTACCAGAAC+TGG | 0.479335 | 2_2:+59979187 | Msa0261530:CDS |
| AGACGAAGTCTTCTCCTAGT+AGG | 0.481638 | 2_2:-59976988 | None:intergenic |
| TCGTGCTTCCAATGCAGCCT+CGG | 0.488925 | 2_2:-59979688 | None:intergenic |
| TTGGCCAAGCAGCAGGTTGA+AGG | 0.492022 | 2_2:+59980418 | Msa0261530:CDS |
| AGTTGTTACATGCGCCCTCC+TGG | 0.495213 | 2_2:+59978939 | Msa0261530:CDS |
| AAGATACTTGGCCAAGCAGC+AGG | 0.498578 | 2_2:+59980411 | Msa0261530:CDS |
| TCTTAAATTTAATTCCTTGG+AGG | 0.499056 | 2_2:+59980521 | Msa0261530:three_prime_UTR |
| AACACCTTCAACCTGCTGCT+TGG | 0.501873 | 2_2:-59980422 | None:intergenic |
| ACTCGTGGCCCTGTCTCCTC+CGG | 0.502107 | 2_2:-59979720 | None:intergenic |
| AGTGAAAAGCCAGGATCTGA+TGG | 0.504454 | 2_2:+59976772 | Msa0261530:CDS |
| TTACAGGGCTGTTTCGGTCA+GGG | 0.507614 | 2_2:-59979551 | None:intergenic |
| GTAGTAGTTGAAGATGATGA+AGG | 0.508383 | 2_2:-59976844 | None:intergenic |
| TGTGAATCAAACAACGTTGG+TGG | 0.511296 | 2_2:+59976561 | Msa0261530:five_prime_UTR |
| CCTGGTGGTATTCTTGCACC+TGG | 0.512639 | 2_2:+59978957 | Msa0261530:CDS |
| TTGACGTTTAAGTTTATCCA+TGG | 0.512677 | 2_2:-59979655 | None:intergenic |
| GGAAAGAAGGGAAAGATACT+TGG | 0.513511 | 2_2:+59980399 | Msa0261530:CDS |
| GAAACTGTAGCTGAAGATTG+AGG | 0.525099 | 2_2:-59976943 | None:intergenic |
| AGAAACCACCGGAGGAGACA+GGG | 0.555174 | 2_2:+59979712 | Msa0261530:CDS |
| ATTTCTAATAATATTTGTGG+TGG | 0.561543 | 2_2:+59980624 | Msa0261530:three_prime_UTR |
| ACGTCAATTAGCTGAGGCCG+AGG | 0.571515 | 2_2:+59979671 | Msa0261530:CDS |
| CGTGGCCCTGTCTCCTCCGG+TGG | 0.574776 | 2_2:-59979717 | None:intergenic |
| TTGACAGATTAGTGCCTCCA+AGG | 0.574920 | 2_2:-59980535 | None:intergenic |
| CCTTGTGTAGAAGGAAAGAA+GGG | 0.576270 | 2_2:+59980387 | Msa0261530:intron |
| AACATTGTGCATGTAAGAAG+TGG | 0.578766 | 2_2:-59976878 | None:intergenic |
| GGTGAAAGTATAATTGCCAC+TGG | 0.584183 | 2_2:+59978978 | Msa0261530:CDS |
| TGGTTGAGTGACCTATAAAG+TGG | 0.605018 | 2_2:+59980561 | Msa0261530:three_prime_UTR |
| ATCATGAGCCTAAAAGTGCA+AGG | 0.613890 | 2_2:+59979161 | Msa0261530:CDS |
| TGTTACATGCGCCCTCCTGG+TGG | 0.616908 | 2_2:+59978942 | Msa0261530:CDS |
| GGAAAGTAGAGCTTGTTAGG+AGG | 0.624206 | 2_2:-59977015 | None:intergenic |
| GGGCCACGAGTAGCTGGAGA+AGG | 0.631012 | 2_2:+59979732 | Msa0261530:CDS |
| AGTCCTTCTCCAGCTACTCG+TGG | 0.642474 | 2_2:-59979735 | None:intergenic |
| GTGGCAATTATACTTTCACC+AGG | 0.648174 | 2_2:-59978975 | None:intergenic |
| CCAGGTGCAAGAATACCACC+AGG | 0.652338 | 2_2:-59978957 | None:intergenic |
| GGAAGCACGAAAGAAACCAC+CGG | 0.655389 | 2_2:+59979701 | Msa0261530:CDS |
| GTGCAAGAATACCACCAGGA+GGG | 0.659703 | 2_2:-59978953 | None:intergenic |
| ACTTAAACGTCAATTAGCTG+AGG | 0.660316 | 2_2:+59979665 | Msa0261530:CDS |
| GAAGTGGAAAGTGAAAAGCC+AGG | 0.671712 | 2_2:+59976763 | Msa0261530:CDS |
| AATTGTGAATCAAACAACGT+TGG | 0.696933 | 2_2:+59976558 | Msa0261530:five_prime_UTR |
| GGTGCAAGAATACCACCAGG+AGG | 0.743740 | 2_2:-59978954 | None:intergenic |
| AGCACGAAAGAAACCACCGG+AGG | 0.751824 | 2_2:+59979704 | Msa0261530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATGTAAAAATTGTT+AGG | + | chr2_2:59977264-59977283 | Msa0261530:intron | 10.0% |
| !!! | CTTTATTTTAAATTTTCAAA+CGG | - | chr2_2:59980012-59980031 | None:intergenic | 10.0% |
| !!! | TATTATTTTTCTTTGTAGAT+AGG | - | chr2_2:59977367-59977386 | None:intergenic | 15.0% |
| !! | ATTATGAATAATTGAATTAG+AGG | + | chr2_2:59977490-59977509 | Msa0261530:intron | 15.0% |
| !!! | TTGAAAACAGATTTTATATT+TGG | - | chr2_2:59979406-59979425 | None:intergenic | 15.0% |
| !!! | ACATTTCAACTATATTTTTT+TGG | + | chr2_2:59979580-59979599 | Msa0261530:intron | 15.0% |
| !!! | TAAATGTTAGTATTTTGTTT+AGG | - | chr2_2:59979989-59980008 | None:intergenic | 15.0% |
| !!! | TGTAATAAAAATGCTGTTTT+TGG | - | chr2_2:59976612-59976631 | None:intergenic | 20.0% |
| !!! | TTTTTGTGAAATAAAGTGAT+GGG | - | chr2_2:59976666-59976685 | None:intergenic | 20.0% |
| !!! | ATGTTTTGTTTTAGTTGTTT+TGG | + | chr2_2:59977117-59977136 | Msa0261530:intron | 20.0% |
| !! | TTAAGATTTATTGTAATGAG+TGG | + | chr2_2:59977191-59977210 | Msa0261530:intron | 20.0% |
| !! | AGTAAAAGATAATACATACT+AGG | - | chr2_2:59977428-59977447 | None:intergenic | 20.0% |
| !!! | TCATAGTTTTTTTGTTTGTT+TGG | + | chr2_2:59977580-59977599 | Msa0261530:intron | 20.0% |
| !! | TAATGACAAAAATAAGTGAA+TGG | - | chr2_2:59977796-59977815 | None:intergenic | 20.0% |
| !! | CAAATTATCATGTTATTCAT+AGG | + | chr2_2:59977886-59977905 | Msa0261530:intron | 20.0% |
| !!! | CTTCTAATTTTCAATTTTCT+AGG | - | chr2_2:59977958-59977977 | None:intergenic | 20.0% |
| !! | TGATATATAAGTGTTTGTTT+AGG | - | chr2_2:59978816-59978835 | None:intergenic | 20.0% |
| !! | TTAAACTATTTATCCAAACA+AGG | + | chr2_2:59978859-59978878 | Msa0261530:intron | 20.0% |
| !! | AAACATCATCATTAGTATTT+AGG | - | chr2_2:59978885-59978904 | None:intergenic | 20.0% |
| !! | TTTATCAGATATATACAATC+AGG | - | chr2_2:59979318-59979337 | None:intergenic | 20.0% |
| !!! | CATTTATGTTAACTAACTTT+TGG | - | chr2_2:59979355-59979374 | None:intergenic | 20.0% |
| !! | TTGAAATGTATAATCTTACA+GGG | - | chr2_2:59979569-59979588 | None:intergenic | 20.0% |
| !! | ACTAACTACTTCATTAATAA+GGG | - | chr2_2:59979939-59979958 | None:intergenic | 20.0% |
| !! | TACTAACTACTTCATTAATA+AGG | - | chr2_2:59979940-59979959 | None:intergenic | 20.0% |
| !! | ATTAATGAAGTAGTTAGTAA+AGG | + | chr2_2:59979941-59979960 | Msa0261530:intron | 20.0% |
| !! | TGTTCTTAAATTTAATTCCT+TGG | + | chr2_2:59980518-59980537 | Msa0261530:three_prime_UTR | 20.0% |
| !! | CTCATTTCTAATAATATTTG+TGG | + | chr2_2:59980621-59980640 | Msa0261530:three_prime_UTR | 20.0% |
| !! | ATTTCTAATAATATTTGTGG+TGG | + | chr2_2:59980624-59980643 | Msa0261530:three_prime_UTR | 20.0% |
| !! | CTTTTTGTGAAATAAAGTGA+TGG | - | chr2_2:59976667-59976686 | None:intergenic | 25.0% |
| ! | AAATGTAAAAATTGTTAGGC+CGG | + | chr2_2:59977268-59977287 | Msa0261530:intron | 25.0% |
| ! | GTTTACATAAATCTCCTAAT+CGG | - | chr2_2:59977654-59977673 | None:intergenic | 25.0% |
| ! | AACATTATCATGTTACTCAT+AGG | + | chr2_2:59977843-59977862 | Msa0261530:intron | 25.0% |
| !! | TTAGTGACTATTTTGCAATT+TGG | + | chr2_2:59977914-59977933 | Msa0261530:intron | 25.0% |
| !!! | CAAACTTTTGAAACATATGA+TGG | - | chr2_2:59978046-59978065 | None:intergenic | 25.0% |
| !!! | TTTGTTGATAATGATCATCA+TGG | + | chr2_2:59978105-59978124 | Msa0261530:intron | 25.0% |
| ! | GAGGAACTAAAAAATTGTAT+TGG | + | chr2_2:59978268-59978287 | Msa0261530:intron | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | + | chr2_2:59978271-59978290 | Msa0261530:intron | 25.0% |
| ! | TAAAAAATTGTATTGGAGGA+GGG | + | chr2_2:59978275-59978294 | Msa0261530:intron | 25.0% |
| !! | ACAAACAGATAATGTCATTT+GGG | - | chr2_2:59978517-59978536 | None:intergenic | 25.0% |
| ! | AACAAACAGATAATGTCATT+TGG | - | chr2_2:59978518-59978537 | None:intergenic | 25.0% |
| !!! | ACATTATCTGTTTGTTTTAG+AGG | + | chr2_2:59978522-59978541 | Msa0261530:intron | 25.0% |
| !! | ATTCAAAGCATTTGATAGTT+TGG | - | chr2_2:59979030-59979049 | None:intergenic | 25.0% |
| !! | ACTATCAAATGCTTTGAATT+CGG | + | chr2_2:59979031-59979050 | Msa0261530:intron | 25.0% |
| ! | TACTAATTGTCTCACAAATT+TGG | + | chr2_2:59979064-59979083 | Msa0261530:intron | 25.0% |
| ! | ATTACAAATGAAAACTACGA+AGG | - | chr2_2:59979234-59979253 | None:intergenic | 25.0% |
| ! | GTTGAAATGTATAATCTTAC+AGG | - | chr2_2:59979570-59979589 | None:intergenic | 25.0% |
| !!! | AAAAGTTTTGTTTCTTGTGA+AGG | + | chr2_2:59979632-59979651 | Msa0261530:intron | 25.0% |
| ! | TTTCAAAAACTAATGAGGAA+AGG | - | chr2_2:59979810-59979829 | None:intergenic | 25.0% |
| !!! | TTAGTATTTTGTTTAGGATG+GGG | - | chr2_2:59979983-59980002 | None:intergenic | 25.0% |
| !!! | GTTAGTATTTTGTTTAGGAT+GGG | - | chr2_2:59979984-59980003 | None:intergenic | 25.0% |
| !!! | TGTTAGTATTTTGTTTAGGA+TGG | - | chr2_2:59979985-59980004 | None:intergenic | 25.0% |
| ! | AAGTAGTTAATGAACTAGTT+AGG | + | chr2_2:59980029-59980048 | Msa0261530:intron | 25.0% |
| ! | AAATACTCTAAATGTGACAT+TGG | + | chr2_2:59980063-59980082 | Msa0261530:intron | 25.0% |
| ! | AATACTCTAAATGTGACATT+GGG | + | chr2_2:59980064-59980083 | Msa0261530:intron | 25.0% |
| ! | TTATCTACATAAATAAGCAC+TGG | + | chr2_2:59980114-59980133 | Msa0261530:intron | 25.0% |
| ! | GAGCTTATAGAAATAGTTAA+AGG | + | chr2_2:59980152-59980171 | Msa0261530:intron | 25.0% |
| ! | CGAAACAGTTATTTAGAAAA+CGG | - | chr2_2:59980362-59980381 | None:intergenic | 25.0% |
| ! | TACAAAAGATCTTTGACATA+AGG | - | chr2_2:59980498-59980517 | None:intergenic | 25.0% |
| ! | TCTTAAATTTAATTCCTTGG+AGG | + | chr2_2:59980521-59980540 | Msa0261530:three_prime_UTR | 25.0% |
| AATTGTGAATCAAACAACGT+TGG | + | chr2_2:59976558-59976577 | Msa0261530:five_prime_UTR | 30.0% | |
| ! | TTGTGGAAGATGGATTTATT+TGG | - | chr2_2:59976639-59976658 | None:intergenic | 30.0% |
| !! | ACTTTTGTAGAATGCCATTT+TGG | + | chr2_2:59976806-59976825 | Msa0261530:CDS | 30.0% |
| AGTTTGAAGAAACACATACA+AGG | - | chr2_2:59977039-59977058 | None:intergenic | 30.0% | |
| ! | AACTGATTCTGATTAATGTG+TGG | + | chr2_2:59977671-59977690 | Msa0261530:intron | 30.0% |
| !!! | TTTTGTTTTGAAGATGAACC+TGG | + | chr2_2:59977694-59977713 | Msa0261530:intron | 30.0% |
| ! | TGCTTTCTCAATTTTCGAAT+GGG | - | chr2_2:59978005-59978024 | None:intergenic | 30.0% |
| ! | ATGCTTTCTCAATTTTCGAA+TGG | - | chr2_2:59978006-59978025 | None:intergenic | 30.0% |
| !! | AATTGAGAAAGCATTCATCT+TGG | + | chr2_2:59978012-59978031 | Msa0261530:intron | 30.0% |
| !! | ATTGAGAAAGCATTCATCTT+GGG | + | chr2_2:59978013-59978032 | Msa0261530:intron | 30.0% |
| !!! | TGCTATTTTGACTAGTTGAT+AGG | + | chr2_2:59978074-59978093 | Msa0261530:intron | 30.0% |
| GGAAAAAAAGAATAAGCAAG+TGG | + | chr2_2:59978169-59978188 | Msa0261530:intron | 30.0% | |
| TGGAAGAAATAGAGGAAAAT+GGG | + | chr2_2:59978189-59978208 | Msa0261530:intron | 30.0% | |
| !!! | TTTTTTAGTTCCTCCAAATG+AGG | - | chr2_2:59978262-59978281 | None:intergenic | 30.0% |
| CTAAAAAATTGTATTGGAGG+AGG | + | chr2_2:59978274-59978293 | Msa0261530:intron | 30.0% | |
| !!! | TCTGTTTGTTTTAGAGGTAA+TGG | + | chr2_2:59978528-59978547 | Msa0261530:intron | 30.0% |
| ! | ACTGTTTTCTTAAGCTATCA+TGG | - | chr2_2:59978730-59978749 | None:intergenic | 30.0% |
| !! | ATTAGTATTTAGGCCTTGTT+TGG | - | chr2_2:59978875-59978894 | None:intergenic | 30.0% |
| ! | TTTGGTAACACAAGTTTAGA+AGG | - | chr2_2:59979012-59979031 | None:intergenic | 30.0% |
| TTTGTGAGACAATTAGTAAG+AGG | - | chr2_2:59979062-59979081 | None:intergenic | 30.0% | |
| ATAAATGCTGATCAAGTTCT+TGG | + | chr2_2:59979368-59979387 | Msa0261530:intron | 30.0% | |
| ! | TTGACGTTTAAGTTTATCCA+TGG | - | chr2_2:59979658-59979677 | None:intergenic | 30.0% |
| !! | AAGGACTTGTTATAGATGAA+TGG | + | chr2_2:59979751-59979770 | Msa0261530:CDS | 30.0% |
| !! | AGGACTTGTTATAGATGAAT+GGG | + | chr2_2:59979752-59979771 | Msa0261530:CDS | 30.0% |
| ! | GGAGTTTTCAAAAACTAATG+AGG | - | chr2_2:59979815-59979834 | None:intergenic | 30.0% |
| GATACTTAATATGAGACGAA+GGG | - | chr2_2:59979836-59979855 | None:intergenic | 30.0% | |
| AATGAAGTAGTTAGTAAAGG+AGG | + | chr2_2:59979944-59979963 | Msa0261530:intron | 30.0% | |
| ATACTCTAAATGTGACATTG+GGG | + | chr2_2:59980065-59980084 | Msa0261530:intron | 30.0% | |
| !! | ACTATTTCTATAAGCTCTCT+CGG | - | chr2_2:59980149-59980168 | None:intergenic | 30.0% |
| ACAGTTATTTAGAAAACGGA+AGG | - | chr2_2:59980358-59980377 | None:intergenic | 30.0% | |
| ATCTCTTCATACCACTTTAT+AGG | - | chr2_2:59980575-59980594 | None:intergenic | 30.0% | |
| !!! | ATAAAGTGATGGGTCTTTTG+TGG | - | chr2_2:59976656-59976675 | None:intergenic | 35.0% |
| AATTGAAGTTTCCGGCAAAT+GGG | - | chr2_2:59976717-59976736 | None:intergenic | 35.0% | |
| AAATTGAAGTTTCCGGCAAA+TGG | - | chr2_2:59976718-59976737 | None:intergenic | 35.0% | |
| !! | TTGTGACTTGTTTGCCAAAA+TGG | - | chr2_2:59976823-59976842 | None:intergenic | 35.0% |
| GTAGTAGTTGAAGATGATGA+AGG | - | chr2_2:59976847-59976866 | None:intergenic | 35.0% | |
| AACATTGTGCATGTAAGAAG+TGG | - | chr2_2:59976881-59976900 | None:intergenic | 35.0% | |
| CTAAATCTTTGCTTCCTACT+AGG | + | chr2_2:59976974-59976993 | Msa0261530:CDS | 35.0% | |
| !!! | AGTTGTTTTGGTCTCAAGTA+TGG | + | chr2_2:59977129-59977148 | Msa0261530:intron | 35.0% |
| !! | TTCATAAGTTCTAGTTCGAC+TGG | + | chr2_2:59977238-59977257 | Msa0261530:intron | 35.0% |
| TTGTGTGTGTGAGTTTCTAT+TGG | + | chr2_2:59977327-59977346 | Msa0261530:intron | 35.0% | |
| AGCCCAAGAATCGATTAATT+TGG | + | chr2_2:59977616-59977635 | Msa0261530:intron | 35.0% | |
| GCCCAAGAATCGATTAATTT+GGG | + | chr2_2:59977617-59977636 | Msa0261530:intron | 35.0% | |
| ! | CCCCAAATTAATCGATTCTT+GGG | - | chr2_2:59977621-59977640 | None:intergenic | 35.0% |
| ! | CCCAAGAATCGATTAATTTG+GGG | + | chr2_2:59977618-59977637 | Msa0261530:intron | 35.0% |
| ! | TCCCCAAATTAATCGATTCT+TGG | - | chr2_2:59977622-59977641 | None:intergenic | 35.0% |
| ACATAAATCTCCTAATCGGT+GGG | - | chr2_2:59977650-59977669 | None:intergenic | 35.0% | |
| TACATAAATCTCCTAATCGG+TGG | - | chr2_2:59977651-59977670 | None:intergenic | 35.0% | |
| !! | TTGAGAAAGCATTCATCTTG+GGG | + | chr2_2:59978014-59978033 | Msa0261530:intron | 35.0% |
| TAAGCAAGTGGAAGAAATAG+AGG | + | chr2_2:59978181-59978200 | Msa0261530:intron | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | + | chr2_2:59978188-59978207 | Msa0261530:intron | 35.0% | |
| AATACAAAACCCTCCTCATT+TGG | + | chr2_2:59978246-59978265 | Msa0261530:intron | 35.0% | |
| !! | TTTTAGGGGTGCAAAATAAG+AGG | - | chr2_2:59978456-59978475 | None:intergenic | 35.0% |
| ! | AAGGAAAGGAAAGGCTTTTA+GGG | - | chr2_2:59978471-59978490 | None:intergenic | 35.0% |
| !! | ATGTCATTTGGGCTTTGTTT+GGG | - | chr2_2:59978506-59978525 | None:intergenic | 35.0% |
| !! | AATGTCATTTGGGCTTTGTT+TGG | - | chr2_2:59978507-59978526 | None:intergenic | 35.0% |
| ! | ACACATCTGAGCTTTTCTAT+TGG | + | chr2_2:59978614-59978633 | Msa0261530:intron | 35.0% |
| AATAAGCTGAAAACGTCTTG+TGG | - | chr2_2:59978695-59978714 | None:intergenic | 35.0% | |
| !! | AACTTTTAGGTGCAGTTGTT+TGG | - | chr2_2:59978923-59978942 | None:intergenic | 35.0% |
| AACCAACTGATCAAAAAAGC+AGG | + | chr2_2:59979126-59979145 | Msa0261530:CDS | 35.0% | |
| ACCAACTGATCAAAAAAGCA+GGG | + | chr2_2:59979127-59979146 | Msa0261530:CDS | 35.0% | |
| ! | CAATTTGCTTAGCAACAGAA+AGG | - | chr2_2:59979288-59979307 | None:intergenic | 35.0% |
| TAGCTGTAGAGCAAATTCTT+CGG | + | chr2_2:59979514-59979533 | Msa0261530:CDS | 35.0% | |
| !!! | AATTCTTCGGGTTGTTTTTC+TGG | + | chr2_2:59979527-59979546 | Msa0261530:CDS | 35.0% |
| ATAATCTTACAGGGCTGTTT+CGG | - | chr2_2:59979560-59979579 | None:intergenic | 35.0% | |
| ACTTAAACGTCAATTAGCTG+AGG | + | chr2_2:59979665-59979684 | Msa0261530:CDS | 35.0% | |
| CGATACTTAATATGAGACGA+AGG | - | chr2_2:59979837-59979856 | None:intergenic | 35.0% | |
| TACTCTAAATGTGACATTGG+GGG | + | chr2_2:59980066-59980085 | Msa0261530:intron | 35.0% | |
| !! | GCTGTTTTCATAAGCTATCT+TGG | - | chr2_2:59980218-59980237 | None:intergenic | 35.0% |
| GGTCAGAAGAAAAAAGAAAC+AGG | - | chr2_2:59980477-59980496 | None:intergenic | 35.0% | |
| AGGCACTAATCTGTCAATTA+TGG | + | chr2_2:59980541-59980560 | Msa0261530:three_prime_UTR | 35.0% | |
| CATAGCTATCTACAAGTTGT+AGG | - | chr2_2:59980714-59980733 | None:intergenic | 35.0% | |
| TGTGAATCAAACAACGTTGG+TGG | + | chr2_2:59976561-59976580 | Msa0261530:five_prime_UTR | 40.0% | |
| TTGCCGGAAACTTCAATTTC+CGG | + | chr2_2:59976719-59976738 | Msa0261530:five_prime_UTR | 40.0% | |
| TCACCGGAAATTGAAGTTTC+CGG | - | chr2_2:59976725-59976744 | None:intergenic | 40.0% | |
| TTCAATTTCCGGTGAGATTC+CGG | + | chr2_2:59976730-59976749 | Msa0261530:five_prime_UTR | 40.0% | |
| !!! | TTCCACTTCCATTTTTTCGC+CGG | - | chr2_2:59976752-59976771 | None:intergenic | 40.0% |
| ! | CAAACTTTTCCATCAGATCC+TGG | - | chr2_2:59976784-59976803 | None:intergenic | 40.0% |
| CAGGATCTGATGGAAAAGTT+TGG | + | chr2_2:59976782-59976801 | Msa0261530:CDS | 40.0% | |
| GAAACTGTAGCTGAAGATTG+AGG | - | chr2_2:59976946-59976965 | None:intergenic | 40.0% | |
| ! | CAAGGAAAGTAGAGCTTGTT+AGG | - | chr2_2:59977021-59977040 | None:intergenic | 40.0% |
| TGGTCTCAAGTATGGTGAAT+AGG | + | chr2_2:59977137-59977156 | Msa0261530:intron | 40.0% | |
| TAGAAACTCACACACACAAG+TGG | - | chr2_2:59977326-59977345 | None:intergenic | 40.0% | |
| ATGAACCTGGTAAGCAAGTT+AGG | + | chr2_2:59977707-59977726 | Msa0261530:CDS | 40.0% | |
| CAAGTCTCATGTAGCTTTCA+AGG | + | chr2_2:59977756-59977775 | Msa0261530:CDS | 40.0% | |
| !! | CATGGCTTTGTTTGCAAGTT+TGG | + | chr2_2:59978123-59978142 | Msa0261530:intron | 40.0% |
| !! | GCTTTGTTTGCAAGTTTGGA+GGG | + | chr2_2:59978127-59978146 | Msa0261530:intron | 40.0% |
| ! | CTTTGTTTGCAAGTTTGGAG+GGG | + | chr2_2:59978128-59978147 | Msa0261530:intron | 40.0% |
| GAAATAGAGGAAAATGGGAG+AGG | + | chr2_2:59978194-59978213 | Msa0261530:intron | 40.0% | |
| TTAGTTCCTCCAAATGAGGA+GGG | - | chr2_2:59978258-59978277 | None:intergenic | 40.0% | |
| ! | TTTAGTTCCTCCAAATGAGG+AGG | - | chr2_2:59978259-59978278 | None:intergenic | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | + | chr2_2:59978281-59978300 | Msa0261530:intron | 40.0% |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | + | chr2_2:59978282-59978301 | Msa0261530:intron | 40.0% |
| ! | AGGAAAGGAAAGGCTTTTAG+GGG | - | chr2_2:59978470-59978489 | None:intergenic | 40.0% |
| ! | GAAGGAAAGGAAAGGCTTTT+AGG | - | chr2_2:59978472-59978491 | None:intergenic | 40.0% |
| ACTCTTTAGATCGCTGCTAT+GGG | + | chr2_2:59978578-59978597 | Msa0261530:intron | 40.0% | |
| GTGGCAATTATACTTTCACC+AGG | - | chr2_2:59978978-59978997 | None:intergenic | 40.0% | |
| ! | GGTGAAAGTATAATTGCCAC+TGG | + | chr2_2:59978978-59978997 | Msa0261530:CDS | 40.0% |
| TTAGAAGGCGATATTACCAG+TGG | - | chr2_2:59978997-59979016 | None:intergenic | 40.0% | |
| !! | GTTGGTTTCTCGTTGTTTTC+TGG | - | chr2_2:59979113-59979132 | None:intergenic | 40.0% |
| !!! | ACCCTGCTTTTTTGATCAGT+TGG | - | chr2_2:59979131-59979150 | None:intergenic | 40.0% |
| ! | ATCATGAGCCTAAAAGTGCA+AGG | + | chr2_2:59979161-59979180 | Msa0261530:CDS | 40.0% |
| ! | CCATTTCACCTTGCACTTTT+AGG | - | chr2_2:59979172-59979191 | None:intergenic | 40.0% |
| ! | CCTAAAAGTGCAAGGTGAAA+TGG | + | chr2_2:59979169-59979188 | Msa0261530:CDS | 40.0% |
| !! | AATGGACTATGTACCAGAAC+TGG | + | chr2_2:59979187-59979206 | Msa0261530:CDS | 40.0% |
| AAATGGCACATTACCAGTTC+TGG | - | chr2_2:59979203-59979222 | None:intergenic | 40.0% | |
| !! | CTACGAAGGTTGATGAGAAA+TGG | - | chr2_2:59979220-59979239 | None:intergenic | 40.0% |
| AGCTGTAGAGCAAATTCTTC+GGG | + | chr2_2:59979515-59979534 | Msa0261530:CDS | 40.0% | |
| ! | TTTGTTTCTTGTGAAGGCCA+TGG | + | chr2_2:59979638-59979657 | Msa0261530:intron | 40.0% |
| GTAGTTAGTAAAGGAGGTCA+AGG | + | chr2_2:59979950-59979969 | Msa0261530:intron | 40.0% | |
| TTCGTTGTTCCTTGTGTAGA+AGG | + | chr2_2:59980378-59980397 | Msa0261530:intron | 40.0% | |
| TCCTTGTGTAGAAGGAAAGA+AGG | + | chr2_2:59980386-59980405 | Msa0261530:intron | 40.0% | |
| CCTTGTGTAGAAGGAAAGAA+GGG | + | chr2_2:59980387-59980406 | Msa0261530:intron | 40.0% | |
| GGAAAGAAGGGAAAGATACT+TGG | + | chr2_2:59980399-59980418 | Msa0261530:CDS | 40.0% | |
| TGGTTGAGTGACCTATAAAG+TGG | + | chr2_2:59980561-59980580 | Msa0261530:three_prime_UTR | 40.0% | |
| ! | GATGGGTCTTTTGTGGAAGA+TGG | - | chr2_2:59976649-59976668 | None:intergenic | 45.0% |
| GGCAAATGGGTCGTTGAATT+GGG | - | chr2_2:59976704-59976723 | None:intergenic | 45.0% | |
| CAATTCAACGACCCATTTGC+CGG | + | chr2_2:59976703-59976722 | Msa0261530:five_prime_UTR | 45.0% | |
| !!! | TTTTTTCGCCGGAATCTCAC+CGG | - | chr2_2:59976741-59976760 | None:intergenic | 45.0% |
| GTGAGATTCCGGCGAAAAAA+TGG | + | chr2_2:59976741-59976760 | Msa0261530:exon | 45.0% | |
| TTCCGGCGAAAAAATGGAAG+TGG | + | chr2_2:59976747-59976766 | Msa0261530:exon | 45.0% | |
| GAAGTGGAAAGTGAAAAGCC+AGG | + | chr2_2:59976763-59976782 | Msa0261530:CDS | 45.0% | |
| AGTGAAAAGCCAGGATCTGA+TGG | + | chr2_2:59976772-59976791 | Msa0261530:CDS | 45.0% | |
| AGACGAAGTCTTCTCCTAGT+AGG | - | chr2_2:59976991-59977010 | None:intergenic | 45.0% | |
| !! | GGAAAGTAGAGCTTGTTAGG+AGG | - | chr2_2:59977018-59977037 | None:intergenic | 45.0% |
| TTGTGACTGAGGTTTGAACC+CGG | + | chr2_2:59977294-59977313 | Msa0261530:intron | 45.0% | |
| CTCATGTAGCTTTCAAGGTC+TGG | + | chr2_2:59977761-59977780 | Msa0261530:intron | 45.0% | |
| !! | GGCTTTGTTTGCAAGTTTGG+AGG | + | chr2_2:59978126-59978145 | Msa0261530:intron | 45.0% |
| TTTGCAAGTTTGGAGGGGAA+GGG | + | chr2_2:59978133-59978152 | Msa0261530:intron | 45.0% | |
| ATAGAGGAAAATGGGAGAGG+AGG | + | chr2_2:59978197-59978216 | Msa0261530:intron | 45.0% | |
| TAGAGGAAAATGGGAGAGGA+GGG | + | chr2_2:59978198-59978217 | Msa0261530:intron | 45.0% | |
| ACAAAACCCTCCTCATTTGG+AGG | + | chr2_2:59978249-59978268 | Msa0261530:intron | 45.0% | |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | + | chr2_2:59978283-59978302 | Msa0261530:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr2_2:59978494-59978513 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr2_2:59978495-59978514 | None:intergenic | 45.0% |
| !! | TTGGGCTTTGTTTGGGAGTT+TGG | - | chr2_2:59978499-59978518 | None:intergenic | 45.0% |
| CATAGCAGCGATCTAAAGAG+TGG | - | chr2_2:59978579-59978598 | None:intergenic | 45.0% | |
| CACTCTTTAGATCGCTGCTA+TGG | + | chr2_2:59978577-59978596 | Msa0261530:intron | 45.0% | |
| ! | GGGCGCATGTAACAACTTTT+AGG | - | chr2_2:59978936-59978955 | None:intergenic | 45.0% |
| !! | GGTTTCTCGTTGTTTTCTGG+TGG | - | chr2_2:59979110-59979129 | None:intergenic | 45.0% |
| ! | ACATTGGGGGCTTGTTTGAA+TGG | + | chr2_2:59980079-59980098 | Msa0261530:intron | 45.0% |
| CCCTTCTTTCCTTCTACACA+AGG | - | chr2_2:59980390-59980409 | None:intergenic | 45.0% | |
| TTGACAGATTAGTGCCTCCA+AGG | - | chr2_2:59980538-59980557 | None:intergenic | 45.0% | |
| CGGCAAATGGGTCGTTGAAT+TGG | - | chr2_2:59976705-59976724 | None:intergenic | 50.0% | |
| CAAACCTCAGTCACAACGTC+CGG | - | chr2_2:59977290-59977309 | None:intergenic | 50.0% | |
| TGTGACTGAGGTTTGAACCC+GGG | + | chr2_2:59977295-59977314 | Msa0261530:intron | 50.0% | |
| !! | GCACTCCTAACTTGCTTACC+AGG | - | chr2_2:59977715-59977734 | None:intergenic | 50.0% |
| GTTTGCAAGTTTGGAGGGGA+AGG | + | chr2_2:59978132-59978151 | Msa0261530:intron | 50.0% | |
| AAAATGGGAGAGGAGGGCTT+TGG | + | chr2_2:59978204-59978223 | Msa0261530:intron | 50.0% | |
| AAATGGGAGAGGAGGGCTTT+GGG | + | chr2_2:59978205-59978224 | Msa0261530:intron | 50.0% | |
| !! | GTATTGGAGGAGGGTTTTGG+GGG | + | chr2_2:59978284-59978303 | Msa0261530:intron | 50.0% |
| !!! | TATTGGAGGAGGGTTTTGGG+GGG | + | chr2_2:59978285-59978304 | Msa0261530:intron | 50.0% |
| TTGGAGGGGAAGGAAAGGAA+AGG | - | chr2_2:59978480-59978499 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr2_2:59978496-59978515 | None:intergenic | 50.0% |
| GTGCAAGAATACCACCAGGA+GGG | - | chr2_2:59978956-59978975 | None:intergenic | 50.0% | |
| CTCTTTGCTCGTCAAACTGC+AGG | - | chr2_2:59979488-59979507 | None:intergenic | 50.0% | |
| ! | TTACAGGGCTGTTTCGGTCA+GGG | - | chr2_2:59979554-59979573 | None:intergenic | 50.0% |
| ! | GGAAGCACGAAAGAAACCAC+CGG | + | chr2_2:59979701-59979720 | Msa0261530:CDS | 50.0% |
| AAGATACTTGGCCAAGCAGC+AGG | + | chr2_2:59980411-59980430 | Msa0261530:CDS | 50.0% | |
| AACACCTTCAACCTGCTGCT+TGG | - | chr2_2:59980425-59980444 | None:intergenic | 50.0% | |
| ACACACAAGTGGAGAAGCCC+GGG | - | chr2_2:59977315-59977334 | None:intergenic | 55.0% | |
| CACACACAAGTGGAGAAGCC+CGG | - | chr2_2:59977316-59977335 | None:intergenic | 55.0% | |
| ! | GGGGACTAATCCCACCGATT+AGG | + | chr2_2:59977637-59977656 | Msa0261530:intron | 55.0% |
| CAAGTTTGGAGGGGAAGGGA+GGG | + | chr2_2:59978137-59978156 | Msa0261530:intron | 55.0% | |
| AAGTTTGGAGGGGAAGGGAG+GGG | + | chr2_2:59978138-59978157 | Msa0261530:intron | 55.0% | |
| AATGGGAGAGGAGGGCTTTG+GGG | + | chr2_2:59978206-59978225 | Msa0261530:intron | 55.0% | |
| !!! | AGGAGGGTTTTGGGGGGTTT+TGG | + | chr2_2:59978291-59978310 | Msa0261530:intron | 55.0% |
| !!! | AGGGTTTTGGGGGGTTTTGG+AGG | + | chr2_2:59978294-59978313 | Msa0261530:intron | 55.0% |
| !!! | GGGTTTTGGGGGGTTTTGGA+GGG | + | chr2_2:59978295-59978314 | Msa0261530:intron | 55.0% |
| GGAGTTTGGAGGGGAAGGAA+AGG | - | chr2_2:59978485-59978504 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | - | chr2_2:59978490-59978509 | None:intergenic | 55.0% | |
| AGTTGTTACATGCGCCCTCC+TGG | + | chr2_2:59978939-59978958 | Msa0261530:CDS | 55.0% | |
| GGTGCAAGAATACCACCAGG+AGG | - | chr2_2:59978957-59978976 | None:intergenic | 55.0% | |
| CCAGGTGCAAGAATACCACC+AGG | - | chr2_2:59978960-59978979 | None:intergenic | 55.0% | |
| CCTGGTGGTATTCTTGCACC+TGG | + | chr2_2:59978957-59978976 | Msa0261530:CDS | 55.0% | |
| ! | CTTACAGGGCTGTTTCGGTC+AGG | - | chr2_2:59979555-59979574 | None:intergenic | 55.0% |
| ACGTCAATTAGCTGAGGCCG+AGG | + | chr2_2:59979671-59979690 | Msa0261530:CDS | 55.0% | |
| TCGTGCTTCCAATGCAGCCT+CGG | - | chr2_2:59979691-59979710 | None:intergenic | 55.0% | |
| AGCACGAAAGAAACCACCGG+AGG | + | chr2_2:59979704-59979723 | Msa0261530:CDS | 55.0% | |
| AAGAAACCACCGGAGGAGAC+AGG | + | chr2_2:59979711-59979730 | Msa0261530:CDS | 55.0% | |
| AGAAACCACCGGAGGAGACA+GGG | + | chr2_2:59979712-59979731 | Msa0261530:CDS | 55.0% | |
| AGTCCTTCTCCAGCTACTCG+TGG | - | chr2_2:59979738-59979757 | None:intergenic | 55.0% | |
| ! | TTGGCCAAGCAGCAGGTTGA+AGG | + | chr2_2:59980418-59980437 | Msa0261530:CDS | 55.0% |
| TAGGCCGGACGTTGTGACTG+AGG | + | chr2_2:59977283-59977302 | Msa0261530:intron | 60.0% | |
| GCAAGTTTGGAGGGGAAGGG+AGG | + | chr2_2:59978136-59978155 | Msa0261530:intron | 60.0% | |
| ! | ATGGGAGAGGAGGGCTTTGG+GGG | + | chr2_2:59978207-59978226 | Msa0261530:intron | 60.0% |
| TGTTACATGCGCCCTCCTGG+TGG | + | chr2_2:59978942-59978961 | Msa0261530:CDS | 60.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | + | chr2_2:59978142-59978161 | Msa0261530:intron | 65.0% | |
| GGGAAGGGAGGGGAAGGCTT+GGG | + | chr2_2:59978148-59978167 | Msa0261530:intron | 65.0% | |
| !! | TGGGAGAGGAGGGCTTTGGG+GGG | + | chr2_2:59978208-59978227 | Msa0261530:intron | 65.0% |
| AGCTGAGGCCGAGGCTGCAT+TGG | + | chr2_2:59979680-59979699 | Msa0261530:CDS | 65.0% | |
| ACTCGTGGCCCTGTCTCCTC+CGG | - | chr2_2:59979723-59979742 | None:intergenic | 65.0% | |
| GAGACAGGGCCACGAGTAGC+TGG | + | chr2_2:59979726-59979745 | Msa0261530:CDS | 65.0% | |
| GGGCCACGAGTAGCTGGAGA+AGG | + | chr2_2:59979732-59979751 | Msa0261530:CDS | 65.0% | |
| GGGGAAGGGAGGGGAAGGCT+TGG | + | chr2_2:59978147-59978166 | Msa0261530:intron | 70.0% | |
| CGTGGCCCTGTCTCCTCCGG+TGG | - | chr2_2:59979720-59979739 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 59976554 | 59980768 | 59976554 | ID=Msa0261530;Name=Msa0261530 |
| chr2_2 | mRNA | 59976554 | 59980768 | 59976554 | ID=Msa0261530-mRNA-1;Parent=Msa0261530;Name=Msa0261530-mRNA-1;_AED=0.06;_eAED=0.06;_QI=206|1|1|1|1|1|7|306|271 |
| chr2_2 | exon | 59976554 | 59977039 | 59976554 | ID=Msa0261530-mRNA-1:exon:18432;Parent=Msa0261530-mRNA-1 |
| chr2_2 | exon | 59977707 | 59977777 | 59977707 | ID=Msa0261530-mRNA-1:exon:18433;Parent=Msa0261530-mRNA-1 |
| chr2_2 | exon | 59978918 | 59978999 | 59978918 | ID=Msa0261530-mRNA-1:exon:18434;Parent=Msa0261530-mRNA-1 |
| chr2_2 | exon | 59979090 | 59979208 | 59979090 | ID=Msa0261530-mRNA-1:exon:18435;Parent=Msa0261530-mRNA-1 |
| chr2_2 | exon | 59979492 | 59979569 | 59979492 | ID=Msa0261530-mRNA-1:exon:18436;Parent=Msa0261530-mRNA-1 |
| chr2_2 | exon | 59979654 | 59979773 | 59979654 | ID=Msa0261530-mRNA-1:exon:18437;Parent=Msa0261530-mRNA-1 |
| chr2_2 | exon | 59980397 | 59980768 | 59980397 | ID=Msa0261530-mRNA-1:exon:18438;Parent=Msa0261530-mRNA-1 |
| chr2_2 | five_prime_UTR | 59976554 | 59976759 | 59976554 | ID=Msa0261530-mRNA-1:five_prime_utr;Parent=Msa0261530-mRNA-1 |
| chr2_2 | CDS | 59976760 | 59977039 | 59976760 | ID=Msa0261530-mRNA-1:cds;Parent=Msa0261530-mRNA-1 |
| chr2_2 | CDS | 59977707 | 59977777 | 59977707 | ID=Msa0261530-mRNA-1:cds;Parent=Msa0261530-mRNA-1 |
| chr2_2 | CDS | 59978918 | 59978999 | 59978918 | ID=Msa0261530-mRNA-1:cds;Parent=Msa0261530-mRNA-1 |
| chr2_2 | CDS | 59979090 | 59979208 | 59979090 | ID=Msa0261530-mRNA-1:cds;Parent=Msa0261530-mRNA-1 |
| chr2_2 | CDS | 59979492 | 59979569 | 59979492 | ID=Msa0261530-mRNA-1:cds;Parent=Msa0261530-mRNA-1 |
| chr2_2 | CDS | 59979654 | 59979773 | 59979654 | ID=Msa0261530-mRNA-1:cds;Parent=Msa0261530-mRNA-1 |
| chr2_2 | CDS | 59980397 | 59980462 | 59980397 | ID=Msa0261530-mRNA-1:cds;Parent=Msa0261530-mRNA-1 |
| chr2_2 | three_prime_UTR | 59980463 | 59980768 | 59980463 | ID=Msa0261530-mRNA-1:three_prime_utr;Parent=Msa0261530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
