Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313190 | XP_003593635.1 | 94.697 | 264 | 13 | 1 | 1 | 264 | 1 | 263 | 1.49e-105 | 317 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313190 | sp|Q01197|E6_GOSHI | 38.976 | 254 | 114 | 14 | 1 | 241 | 1 | 226 | 2.04e-19 | 87.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0192570 | Msa0313190 | 0.826289 | 2.943067e-54 | -8.615850e-47 |
| Msa0272660 | Msa0313190 | 0.805633 | 1.214607e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313190 | MtrunA17_Chr2g0282691 | 94.697 | 264 | 13 | 1 | 1 | 264 | 1 | 263 | 1.37e-109 | 317 |
| Msa0313190 | MtrunA17_Chr4g0046601 | 55.556 | 135 | 50 | 4 | 130 | 261 | 230 | 357 | 8.05e-22 | 93.2 |
| Msa0313190 | MtrunA17_Chr4g0046601 | 43.165 | 139 | 65 | 4 | 1 | 131 | 1 | 133 | 9.89e-19 | 84.3 |
| Msa0313190 | MtrunA17_Chr2g0324881 | 30.859 | 256 | 116 | 8 | 21 | 254 | 21 | 237 | 5.17e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313190 | AT2G33850.1 | 31.429 | 210 | 101 | 7 | 21 | 202 | 22 | 216 | 1.39e-11 | 63.5 |
Find 51 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTGGTTTGTTTGTAAC+TGG | 0.131657 | 2_4:+8561297 | None:intergenic |
| TGTAGTTTCCATGATTATTC+TGG | 0.252931 | 2_4:+8560731 | None:intergenic |
| TTGTGTCCCTCAACTCATTT+TGG | 0.256754 | 2_4:+8561073 | None:intergenic |
| CAAAATAGCTATGGCTTATA+TGG | 0.260837 | 2_4:-8561249 | Msa0313190:CDS |
| GTTATAGTATTTGTTGTTGT+TGG | 0.293134 | 2_4:+8561146 | None:intergenic |
| TATTACAACAAAGACACTTT+TGG | 0.320337 | 2_4:-8561102 | Msa0313190:CDS |
| AACTGGGGATTCTTCTTTGT+TGG | 0.334551 | 2_4:+8561314 | None:intergenic |
| TTATAGTATTTGTTGTTGTT+GGG | 0.334833 | 2_4:+8561147 | None:intergenic |
| ATGAAAGGTGGTTGCTCCTC+TGG | 0.339057 | 2_4:+8561282 | None:intergenic |
| ATTATAATGCTCAGAATAAC+AGG | 0.351179 | 2_4:-8560930 | Msa0313190:CDS |
| GGTGGATGCCGTGGCGGCGG+TGG | 0.353742 | 2_4:+8561203 | None:intergenic |
| ACTGGGGATTCTTCTTTGTT+GGG | 0.370013 | 2_4:+8561315 | None:intergenic |
| CCTCTGGTTTGTTTGTAACT+GGG | 0.383487 | 2_4:+8561298 | None:intergenic |
| TACAACAATAATAATAACTA+TGG | 0.387734 | 2_4:-8560769 | Msa0313190:CDS |
| GATGAATCACCATACATTGT+TGG | 0.414049 | 2_4:+8560820 | None:intergenic |
| GCTGAAGAATTCACTCTCTC+TGG | 0.421980 | 2_4:+8561371 | None:intergenic |
| GAGTGAACAACAATAATAAC+TGG | 0.430385 | 2_4:-8560792 | Msa0313190:CDS |
| TGTGTCTTCAAAGTTAGAAT+TGG | 0.437689 | 2_4:+8561179 | None:intergenic |
| AAATACAATCCAACAATGTA+TGG | 0.452288 | 2_4:-8560829 | Msa0313190:CDS |
| TAAGAGGATGAAAGAAATGT+AGG | 0.456040 | 2_4:+8561425 | None:intergenic |
| GATGCCGTGGCGGCGGTGGA+AGG | 0.457928 | 2_4:+8561207 | None:intergenic |
| GGTGGTGGATGCCGTGGCGG+CGG | 0.460270 | 2_4:+8561200 | None:intergenic |
| CTCTGGTTTGTTTGTAACTG+GGG | 0.464914 | 2_4:+8561299 | None:intergenic |
| AATGAGTACCAGAATAATCA+TGG | 0.478186 | 2_4:-8560739 | Msa0313190:CDS |
| GTCTTCAAAGTTAGAATTGG+TGG | 0.482976 | 2_4:+8561182 | None:intergenic |
| TGTTGTTGAAGTAGTACTCT+TGG | 0.484835 | 2_4:+8561001 | None:intergenic |
| GCAACAAAAGAGTTGTTAAG+AGG | 0.489505 | 2_4:+8561409 | None:intergenic |
| AGGATGAAAGAAATGTAGGT+TGG | 0.497294 | 2_4:+8561429 | None:intergenic |
| GGATGAAAGAAATGTAGGTT+GGG | 0.498004 | 2_4:+8561430 | None:intergenic |
| TATAGTATTTGTTGTTGTTG+GGG | 0.516144 | 2_4:+8561148 | None:intergenic |
| AAATAACCAAAATGAGTTGA+GGG | 0.518734 | 2_4:-8561079 | Msa0313190:CDS |
| TTACAAGAACCAAGAGGAGT+TGG | 0.528023 | 2_4:-8560704 | Msa0313190:CDS |
| GAAATAACCAAAATGAGTTG+AGG | 0.542156 | 2_4:-8561080 | Msa0313190:CDS |
| GACACAAAGTACAATGAAGA+AGG | 0.550520 | 2_4:-8561057 | Msa0313190:CDS |
| CCTCAGACACAAAATAGCTA+TGG | 0.562030 | 2_4:-8561258 | Msa0313190:CDS |
| CATTCCTTCCACCGCCGCCA+CGG | 0.564976 | 2_4:-8561211 | Msa0313190:CDS |
| AGAAGGTTACAACTCCATGA+TGG | 0.580265 | 2_4:-8561040 | Msa0313190:CDS |
| AGGTACAATGGTGAGAAACA+AGG | 0.586625 | 2_4:-8560910 | Msa0313190:CDS |
| TTCAAAGTTAGAATTGGTGG+TGG | 0.587007 | 2_4:+8561185 | None:intergenic |
| ATGTATGGTGATTCATCTAG+AGG | 0.598645 | 2_4:-8560814 | Msa0313190:CDS |
| TGTGTCTGAGGAATGAAAGG+TGG | 0.603943 | 2_4:+8561270 | None:intergenic |
| AATAATCATGGAAACTACAA+TGG | 0.611623 | 2_4:-8560727 | Msa0313190:CDS |
| GCTCAGAATAACAGGTACAA+TGG | 0.619912 | 2_4:-8560922 | Msa0313190:CDS |
| AAGGAATGTGATCAGAGTCA+TGG | 0.626750 | 2_4:+8561226 | None:intergenic |
| AGAATTGGTGGTGGATGCCG+TGG | 0.633457 | 2_4:+8561194 | None:intergenic |
| ATTGGTGGTGGATGCCGTGG+CGG | 0.636866 | 2_4:+8561197 | None:intergenic |
| GGTACAATGGTGAGAAACAA+GGG | 0.647160 | 2_4:-8560909 | Msa0313190:CDS |
| AGAAATGTAGGTTGGGAATG+TGG | 0.649922 | 2_4:+8561437 | None:intergenic |
| TCTCTGGCTATAGTTTGTAG+AGG | 0.668021 | 2_4:+8561387 | None:intergenic |
| CCCAGTTACAAACAAACCAG+AGG | 0.679700 | 2_4:-8561298 | Msa0313190:CDS |
| CAATGGTTACAAGAACCAAG+AGG | 0.723148 | 2_4:-8560710 | Msa0313190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAACAATAATAATAACTA+TGG | - | chr2_4:8561341-8561360 | Msa0313190:CDS | 15.0% |
| !! | TACAACAATAATAATAACTA+TGG | - | chr2_4:8561341-8561360 | Msa0313190:CDS | 15.0% |
| !!! | TTATAGTATTTGTTGTTGTT+GGG | + | chr2_4:8560966-8560985 | None:intergenic | 20.0% |
| !!! | TTATAGTATTTGTTGTTGTT+GGG | + | chr2_4:8560966-8560985 | None:intergenic | 20.0% |
| !!! | TATAGTATTTGTTGTTGTTG+GGG | + | chr2_4:8560965-8560984 | None:intergenic | 25.0% |
| !!! | GTTATAGTATTTGTTGTTGT+TGG | + | chr2_4:8560967-8560986 | None:intergenic | 25.0% |
| !! | TATTACAACAAAGACACTTT+TGG | - | chr2_4:8561008-8561027 | Msa0313190:CDS | 25.0% |
| !! | AAATAACCAAAATGAGTTGA+GGG | - | chr2_4:8561031-8561050 | Msa0313190:CDS | 25.0% |
| ! | ATTATAATGCTCAGAATAAC+AGG | - | chr2_4:8561180-8561199 | Msa0313190:CDS | 25.0% |
| ! | AAATACAATCCAACAATGTA+TGG | - | chr2_4:8561281-8561300 | Msa0313190:CDS | 25.0% |
| ! | AATAATCATGGAAACTACAA+TGG | - | chr2_4:8561383-8561402 | Msa0313190:CDS | 25.0% |
| !!! | TATAGTATTTGTTGTTGTTG+GGG | + | chr2_4:8560965-8560984 | None:intergenic | 25.0% |
| !!! | GTTATAGTATTTGTTGTTGT+TGG | + | chr2_4:8560967-8560986 | None:intergenic | 25.0% |
| !! | TATTACAACAAAGACACTTT+TGG | - | chr2_4:8561008-8561027 | Msa0313190:CDS | 25.0% |
| !! | AAATAACCAAAATGAGTTGA+GGG | - | chr2_4:8561031-8561050 | Msa0313190:CDS | 25.0% |
| ! | ATTATAATGCTCAGAATAAC+AGG | - | chr2_4:8561180-8561199 | Msa0313190:CDS | 25.0% |
| ! | AAATACAATCCAACAATGTA+TGG | - | chr2_4:8561281-8561300 | Msa0313190:CDS | 25.0% |
| ! | AATAATCATGGAAACTACAA+TGG | - | chr2_4:8561383-8561402 | Msa0313190:CDS | 25.0% |
| TAAGAGGATGAAAGAAATGT+AGG | + | chr2_4:8560688-8560707 | None:intergenic | 30.0% | |
| CAAAATAGCTATGGCTTATA+TGG | - | chr2_4:8560861-8560880 | Msa0313190:CDS | 30.0% | |
| TGTGTCTTCAAAGTTAGAAT+TGG | + | chr2_4:8560934-8560953 | None:intergenic | 30.0% | |
| GAAATAACCAAAATGAGTTG+AGG | - | chr2_4:8561030-8561049 | Msa0313190:CDS | 30.0% | |
| !!! | GTTGTTTTGTTTTTCCATCA+TGG | + | chr2_4:8561087-8561106 | None:intergenic | 30.0% |
| GAGTGAACAACAATAATAAC+TGG | - | chr2_4:8561318-8561337 | Msa0313190:CDS | 30.0% | |
| AATGAGTACCAGAATAATCA+TGG | - | chr2_4:8561371-8561390 | Msa0313190:CDS | 30.0% | |
| TGTAGTTTCCATGATTATTC+TGG | + | chr2_4:8561382-8561401 | None:intergenic | 30.0% | |
| TAAGAGGATGAAAGAAATGT+AGG | + | chr2_4:8560688-8560707 | None:intergenic | 30.0% | |
| CAAAATAGCTATGGCTTATA+TGG | - | chr2_4:8560861-8560880 | Msa0313190:CDS | 30.0% | |
| TGTGTCTTCAAAGTTAGAAT+TGG | + | chr2_4:8560934-8560953 | None:intergenic | 30.0% | |
| GAAATAACCAAAATGAGTTG+AGG | - | chr2_4:8561030-8561049 | Msa0313190:CDS | 30.0% | |
| !!! | GTTGTTTTGTTTTTCCATCA+TGG | + | chr2_4:8561087-8561106 | None:intergenic | 30.0% |
| GAGTGAACAACAATAATAAC+TGG | - | chr2_4:8561318-8561337 | Msa0313190:CDS | 30.0% | |
| AATGAGTACCAGAATAATCA+TGG | - | chr2_4:8561371-8561390 | Msa0313190:CDS | 30.0% | |
| TGTAGTTTCCATGATTATTC+TGG | + | chr2_4:8561382-8561401 | None:intergenic | 30.0% | |
| GGATGAAAGAAATGTAGGTT+GGG | + | chr2_4:8560683-8560702 | None:intergenic | 35.0% | |
| AGGATGAAAGAAATGTAGGT+TGG | + | chr2_4:8560684-8560703 | None:intergenic | 35.0% | |
| GCAACAAAAGAGTTGTTAAG+AGG | + | chr2_4:8560704-8560723 | None:intergenic | 35.0% | |
| ! | TTTTGTGTCTGAGGAATGAA+AGG | + | chr2_4:8560846-8560865 | None:intergenic | 35.0% |
| TTCAAAGTTAGAATTGGTGG+TGG | + | chr2_4:8560928-8560947 | None:intergenic | 35.0% | |
| GTCTTCAAAGTTAGAATTGG+TGG | + | chr2_4:8560931-8560950 | None:intergenic | 35.0% | |
| GACACAAAGTACAATGAAGA+AGG | - | chr2_4:8561053-8561072 | Msa0313190:CDS | 35.0% | |
| TGTTGTTGAAGTAGTACTCT+TGG | + | chr2_4:8561112-8561131 | None:intergenic | 35.0% | |
| ! | GATGAGTGACACAAGATTTT+TGG | - | chr2_4:8561223-8561242 | Msa0313190:CDS | 35.0% |
| !! | AGTGACACAAGATTTTTGGA+AGG | - | chr2_4:8561227-8561246 | Msa0313190:CDS | 35.0% |
| GATGAATCACCATACATTGT+TGG | + | chr2_4:8561293-8561312 | None:intergenic | 35.0% | |
| ATGTATGGTGATTCATCTAG+AGG | - | chr2_4:8561296-8561315 | Msa0313190:CDS | 35.0% | |
| GGATGAAAGAAATGTAGGTT+GGG | + | chr2_4:8560683-8560702 | None:intergenic | 35.0% | |
| AGGATGAAAGAAATGTAGGT+TGG | + | chr2_4:8560684-8560703 | None:intergenic | 35.0% | |
| GCAACAAAAGAGTTGTTAAG+AGG | + | chr2_4:8560704-8560723 | None:intergenic | 35.0% | |
| ! | TTTTGTGTCTGAGGAATGAA+AGG | + | chr2_4:8560846-8560865 | None:intergenic | 35.0% |
| TTCAAAGTTAGAATTGGTGG+TGG | + | chr2_4:8560928-8560947 | None:intergenic | 35.0% | |
| GTCTTCAAAGTTAGAATTGG+TGG | + | chr2_4:8560931-8560950 | None:intergenic | 35.0% | |
| GACACAAAGTACAATGAAGA+AGG | - | chr2_4:8561053-8561072 | Msa0313190:CDS | 35.0% | |
| TGTTGTTGAAGTAGTACTCT+TGG | + | chr2_4:8561112-8561131 | None:intergenic | 35.0% | |
| ! | GATGAGTGACACAAGATTTT+TGG | - | chr2_4:8561223-8561242 | Msa0313190:CDS | 35.0% |
| !! | AGTGACACAAGATTTTTGGA+AGG | - | chr2_4:8561227-8561246 | Msa0313190:CDS | 35.0% |
| GATGAATCACCATACATTGT+TGG | + | chr2_4:8561293-8561312 | None:intergenic | 35.0% | |
| ATGTATGGTGATTCATCTAG+AGG | - | chr2_4:8561296-8561315 | Msa0313190:CDS | 35.0% | |
| ! | AGAAATGTAGGTTGGGAATG+TGG | + | chr2_4:8560676-8560695 | None:intergenic | 40.0% |
| ! | TCTCTGGCTATAGTTTGTAG+AGG | + | chr2_4:8560726-8560745 | None:intergenic | 40.0% |
| ACTGGGGATTCTTCTTTGTT+GGG | + | chr2_4:8560798-8560817 | None:intergenic | 40.0% | |
| AACTGGGGATTCTTCTTTGT+TGG | + | chr2_4:8560799-8560818 | None:intergenic | 40.0% | |
| !! | CTCTGGTTTGTTTGTAACTG+GGG | + | chr2_4:8560814-8560833 | None:intergenic | 40.0% |
| !! | CCTCTGGTTTGTTTGTAACT+GGG | + | chr2_4:8560815-8560834 | None:intergenic | 40.0% |
| !! | TCCTCTGGTTTGTTTGTAAC+TGG | + | chr2_4:8560816-8560835 | None:intergenic | 40.0% |
| !! | CCATAGCTATTTTGTGTCTG+AGG | + | chr2_4:8560855-8560874 | None:intergenic | 40.0% |
| CCTCAGACACAAAATAGCTA+TGG | - | chr2_4:8560852-8560871 | Msa0313190:CDS | 40.0% | |
| AAGGAATGTGATCAGAGTCA+TGG | + | chr2_4:8560887-8560906 | None:intergenic | 40.0% | |
| ! | TTGTGTCCCTCAACTCATTT+TGG | + | chr2_4:8561040-8561059 | None:intergenic | 40.0% |
| AGAAGGTTACAACTCCATGA+TGG | - | chr2_4:8561070-8561089 | Msa0313190:CDS | 40.0% | |
| GCTCAGAATAACAGGTACAA+TGG | - | chr2_4:8561188-8561207 | Msa0313190:CDS | 40.0% | |
| AGGTACAATGGTGAGAAACA+AGG | - | chr2_4:8561200-8561219 | Msa0313190:CDS | 40.0% | |
| GGTACAATGGTGAGAAACAA+GGG | - | chr2_4:8561201-8561220 | Msa0313190:CDS | 40.0% | |
| !! | GACACAAGATTTTTGGAAGG+TGG | - | chr2_4:8561230-8561249 | Msa0313190:CDS | 40.0% |
| CAATGGTTACAAGAACCAAG+AGG | - | chr2_4:8561400-8561419 | Msa0313190:CDS | 40.0% | |
| TTACAAGAACCAAGAGGAGT+TGG | - | chr2_4:8561406-8561425 | Msa0313190:CDS | 40.0% | |
| ! | GTTCATTTTCCAACTCCTCT+TGG | + | chr2_4:8561418-8561437 | None:intergenic | 40.0% |
| ! | AGAAATGTAGGTTGGGAATG+TGG | + | chr2_4:8560676-8560695 | None:intergenic | 40.0% |
| ! | TCTCTGGCTATAGTTTGTAG+AGG | + | chr2_4:8560726-8560745 | None:intergenic | 40.0% |
| ACTGGGGATTCTTCTTTGTT+GGG | + | chr2_4:8560798-8560817 | None:intergenic | 40.0% | |
| AACTGGGGATTCTTCTTTGT+TGG | + | chr2_4:8560799-8560818 | None:intergenic | 40.0% | |
| !! | CTCTGGTTTGTTTGTAACTG+GGG | + | chr2_4:8560814-8560833 | None:intergenic | 40.0% |
| !! | CCTCTGGTTTGTTTGTAACT+GGG | + | chr2_4:8560815-8560834 | None:intergenic | 40.0% |
| !! | TCCTCTGGTTTGTTTGTAAC+TGG | + | chr2_4:8560816-8560835 | None:intergenic | 40.0% |
| !! | CCATAGCTATTTTGTGTCTG+AGG | + | chr2_4:8560855-8560874 | None:intergenic | 40.0% |
| CCTCAGACACAAAATAGCTA+TGG | - | chr2_4:8560852-8560871 | Msa0313190:CDS | 40.0% | |
| AAGGAATGTGATCAGAGTCA+TGG | + | chr2_4:8560887-8560906 | None:intergenic | 40.0% | |
| ! | TTGTGTCCCTCAACTCATTT+TGG | + | chr2_4:8561040-8561059 | None:intergenic | 40.0% |
| AGAAGGTTACAACTCCATGA+TGG | - | chr2_4:8561070-8561089 | Msa0313190:CDS | 40.0% | |
| GCTCAGAATAACAGGTACAA+TGG | - | chr2_4:8561188-8561207 | Msa0313190:CDS | 40.0% | |
| AGGTACAATGGTGAGAAACA+AGG | - | chr2_4:8561200-8561219 | Msa0313190:CDS | 40.0% | |
| GGTACAATGGTGAGAAACAA+GGG | - | chr2_4:8561201-8561220 | Msa0313190:CDS | 40.0% | |
| !! | GACACAAGATTTTTGGAAGG+TGG | - | chr2_4:8561230-8561249 | Msa0313190:CDS | 40.0% |
| CAATGGTTACAAGAACCAAG+AGG | - | chr2_4:8561400-8561419 | Msa0313190:CDS | 40.0% | |
| TTACAAGAACCAAGAGGAGT+TGG | - | chr2_4:8561406-8561425 | Msa0313190:CDS | 40.0% | |
| ! | GTTCATTTTCCAACTCCTCT+TGG | + | chr2_4:8561418-8561437 | None:intergenic | 40.0% |
| GCTGAAGAATTCACTCTCTC+TGG | + | chr2_4:8560742-8560761 | None:intergenic | 45.0% | |
| CCCAGTTACAAACAAACCAG+AGG | - | chr2_4:8560812-8560831 | Msa0313190:CDS | 45.0% | |
| TGTGTCTGAGGAATGAAAGG+TGG | + | chr2_4:8560843-8560862 | None:intergenic | 45.0% | |
| GCTGAAGAATTCACTCTCTC+TGG | + | chr2_4:8560742-8560761 | None:intergenic | 45.0% | |
| CCCAGTTACAAACAAACCAG+AGG | - | chr2_4:8560812-8560831 | Msa0313190:CDS | 45.0% | |
| TGTGTCTGAGGAATGAAAGG+TGG | + | chr2_4:8560843-8560862 | None:intergenic | 45.0% | |
| ATGAAAGGTGGTTGCTCCTC+TGG | + | chr2_4:8560831-8560850 | None:intergenic | 50.0% | |
| ATGAAAGGTGGTTGCTCCTC+TGG | + | chr2_4:8560831-8560850 | None:intergenic | 50.0% | |
| !! | AGAATTGGTGGTGGATGCCG+TGG | + | chr2_4:8560919-8560938 | None:intergenic | 55.0% |
| !! | AGAATTGGTGGTGGATGCCG+TGG | + | chr2_4:8560919-8560938 | None:intergenic | 55.0% |
| !! | ATTGGTGGTGGATGCCGTGG+CGG | + | chr2_4:8560916-8560935 | None:intergenic | 60.0% |
| !! | ATTGGTGGTGGATGCCGTGG+CGG | + | chr2_4:8560916-8560935 | None:intergenic | 60.0% |
| CATTCCTTCCACCGCCGCCA+CGG | - | chr2_4:8560899-8560918 | Msa0313190:CDS | 65.0% | |
| CATTCCTTCCACCGCCGCCA+CGG | - | chr2_4:8560899-8560918 | Msa0313190:CDS | 65.0% | |
| GATGCCGTGGCGGCGGTGGA+AGG | + | chr2_4:8560906-8560925 | None:intergenic | 75.0% | |
| !! | GGTGGTGGATGCCGTGGCGG+CGG | + | chr2_4:8560913-8560932 | None:intergenic | 75.0% |
| GATGCCGTGGCGGCGGTGGA+AGG | + | chr2_4:8560906-8560925 | None:intergenic | 75.0% | |
| !! | GGTGGTGGATGCCGTGGCGG+CGG | + | chr2_4:8560913-8560932 | None:intergenic | 75.0% |
| ! | GGTGGATGCCGTGGCGGCGG+TGG | + | chr2_4:8560910-8560929 | None:intergenic | 80.0% |
| ! | GGTGGATGCCGTGGCGGCGG+TGG | + | chr2_4:8560910-8560929 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 8560669 | 8561463 | 8560669 | ID=Msa0313190;Name=Msa0313190 |
| chr2_4 | mRNA | 8560669 | 8561463 | 8560669 | ID=Msa0313190-mRNA-1;Parent=Msa0313190;Name=Msa0313190-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|264 |
| chr2_4 | exon | 8560669 | 8561463 | 8560669 | ID=Msa0313190-mRNA-1:exon:3248;Parent=Msa0313190-mRNA-1 |
| chr2_4 | CDS | 8560669 | 8561463 | 8560669 | ID=Msa0313190-mRNA-1:cds;Parent=Msa0313190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
