Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192570 | XP_003593635.1 | 95.076 | 264 | 12 | 1 | 1 | 264 | 1 | 263 | 1.33e-106 | 319 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192570 | sp|Q01197|E6_GOSHI | 38.976 | 254 | 114 | 14 | 1 | 241 | 1 | 226 | 2.04e-19 | 87.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192570 | G7ISF3 | 95.076 | 264 | 12 | 1 | 1 | 264 | 1 | 263 | 6.33e-107 | 319 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0192540 | Msa0192570 | 0.859504 | 3.951495e-63 | -8.615850e-47 |
| Msa0192570 | Msa0272660 | 0.896085 | 5.170638e-76 | -8.615850e-47 |
| Msa0192570 | Msa0313190 | 0.826289 | 2.943067e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192570 | MtrunA17_Chr2g0282691 | 95.076 | 264 | 12 | 1 | 1 | 264 | 1 | 263 | 1.22e-110 | 319 |
| Msa0192570 | MtrunA17_Chr4g0046601 | 56.618 | 136 | 47 | 5 | 130 | 261 | 230 | 357 | 6.86e-22 | 93.2 |
| Msa0192570 | MtrunA17_Chr4g0046601 | 43.165 | 139 | 65 | 4 | 1 | 131 | 1 | 133 | 1.11e-18 | 84.3 |
| Msa0192570 | MtrunA17_Chr2g0324881 | 30.469 | 256 | 117 | 8 | 21 | 254 | 21 | 237 | 1.94e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192570 | AT2G33850.1 | 31.429 | 210 | 101 | 7 | 21 | 202 | 22 | 216 | 5.85e-12 | 64.7 |
Find 51 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCTGGTTTGTTTGTAAC+TGG | 0.131657 | 2_1:+8371714 | None:intergenic |
| TGTAGTTGCCATGGTTATTC+TGG | 0.221088 | 2_1:+8371148 | None:intergenic |
| TTGTGTCCCTCAACTCATTT+TGG | 0.256754 | 2_1:+8371490 | None:intergenic |
| CAAAATAGCTATGGCTTATA+TGG | 0.260837 | 2_1:-8371666 | Msa0192570:CDS |
| GTTGTAGTATTTGTTGTTGT+TGG | 0.271949 | 2_1:+8371563 | None:intergenic |
| TATTACAACAAAGACACTTT+TGG | 0.320337 | 2_1:-8371519 | Msa0192570:CDS |
| TTGTAGTATTTGTTGTTGTT+GGG | 0.324049 | 2_1:+8371564 | None:intergenic |
| AACTGGGGATTCTTCTTTGT+TGG | 0.334551 | 2_1:+8371731 | None:intergenic |
| ATGAAAGGTGGTTGCTCCTC+TGG | 0.339057 | 2_1:+8371699 | None:intergenic |
| ATTATAATGCTCAGAATAAC+AGG | 0.351179 | 2_1:-8371347 | Msa0192570:CDS |
| GGTGGATGCCGTGGCGGCGG+TGG | 0.353742 | 2_1:+8371620 | None:intergenic |
| ACTGGGGATTCTTCTTTGTT+GGG | 0.370013 | 2_1:+8371732 | None:intergenic |
| CCTCTGGTTTGTTTGTAACT+GGG | 0.383487 | 2_1:+8371715 | None:intergenic |
| TACAACAATAATAATAACTA+TGG | 0.387734 | 2_1:-8371186 | Msa0192570:CDS |
| GATGAATCACCATACATTGT+TGG | 0.414049 | 2_1:+8371237 | None:intergenic |
| GCTGAAGAATTCACTCTCTC+TGG | 0.421980 | 2_1:+8371788 | None:intergenic |
| GAGTGAACAACAATAATAAC+TGG | 0.430385 | 2_1:-8371209 | Msa0192570:CDS |
| TGTGTCTTCAAAGTTAGAAT+TGG | 0.437689 | 2_1:+8371596 | None:intergenic |
| AAATACAATCCAACAATGTA+TGG | 0.452288 | 2_1:-8371246 | Msa0192570:CDS |
| TAAGAGGATGAAAGAAATGT+AGG | 0.456040 | 2_1:+8371842 | None:intergenic |
| GATGCCGTGGCGGCGGTGGA+AGG | 0.457928 | 2_1:+8371624 | None:intergenic |
| GGTGGTGGATGCCGTGGCGG+CGG | 0.460270 | 2_1:+8371617 | None:intergenic |
| CTCTGGTTTGTTTGTAACTG+GGG | 0.464914 | 2_1:+8371716 | None:intergenic |
| AATTATTATAATTATTGTTG+TGG | 0.469980 | 2_1:+8371367 | None:intergenic |
| GTCTTCAAAGTTAGAATTGG+TGG | 0.482976 | 2_1:+8371599 | None:intergenic |
| TGTTGTTGAAGTAGTACTCT+TGG | 0.484835 | 2_1:+8371418 | None:intergenic |
| GCAACAAAAGAGTTGTTAAG+AGG | 0.489505 | 2_1:+8371826 | None:intergenic |
| AGGATGAAAGAAATGTAGGT+TGG | 0.497294 | 2_1:+8371846 | None:intergenic |
| GGATGAAAGAAATGTAGGTT+GGG | 0.498004 | 2_1:+8371847 | None:intergenic |
| TGTAACCATTGTAGTTGCCA+TGG | 0.515915 | 2_1:+8371139 | None:intergenic |
| AAATAACCAAAATGAGTTGA+GGG | 0.518734 | 2_1:-8371496 | Msa0192570:CDS |
| TGTAGTATTTGTTGTTGTTG+GGG | 0.531822 | 2_1:+8371565 | None:intergenic |
| GAAATAACCAAAATGAGTTG+AGG | 0.542156 | 2_1:-8371497 | Msa0192570:CDS |
| GACACAAAGTACAATGAAGA+AGG | 0.550520 | 2_1:-8371474 | Msa0192570:CDS |
| CCTCAGACACAAAATAGCTA+TGG | 0.562030 | 2_1:-8371675 | Msa0192570:CDS |
| CATTCCTTCCACCGCCGCCA+CGG | 0.564976 | 2_1:-8371628 | Msa0192570:CDS |
| AGAAGGTTACAACTCCATGA+TGG | 0.580265 | 2_1:-8371457 | Msa0192570:CDS |
| AGGTACAATGGTGAGAAACA+AGG | 0.586625 | 2_1:-8371327 | Msa0192570:CDS |
| TTCAAAGTTAGAATTGGTGG+TGG | 0.587007 | 2_1:+8371602 | None:intergenic |
| ATGTATGGTGATTCATCTAG+AGG | 0.598645 | 2_1:-8371231 | Msa0192570:CDS |
| TGTGTCTGAGGAATGAAAGG+TGG | 0.603943 | 2_1:+8371687 | None:intergenic |
| AATAACCATGGCAACTACAA+TGG | 0.610902 | 2_1:-8371144 | Msa0192570:CDS |
| GCTCAGAATAACAGGTACAA+TGG | 0.619912 | 2_1:-8371339 | Msa0192570:CDS |
| AAGGAATGTGATCAGAGTCA+TGG | 0.626750 | 2_1:+8371643 | None:intergenic |
| AGAATTGGTGGTGGATGCCG+TGG | 0.633457 | 2_1:+8371611 | None:intergenic |
| ATTGGTGGTGGATGCCGTGG+CGG | 0.636866 | 2_1:+8371614 | None:intergenic |
| GGTACAATGGTGAGAAACAA+GGG | 0.647160 | 2_1:-8371326 | Msa0192570:CDS |
| AGAAATGTAGGTTGGGAATG+TGG | 0.649922 | 2_1:+8371854 | None:intergenic |
| TCTCTGGCTATAGTTTGTAG+AGG | 0.668021 | 2_1:+8371804 | None:intergenic |
| AATGAGTACCAGAATAACCA+TGG | 0.671041 | 2_1:-8371156 | Msa0192570:CDS |
| CCCAGTTACAAACAAACCAG+AGG | 0.679700 | 2_1:-8371715 | Msa0192570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTATAATTATTGTTG+TGG | + | chr2_1:8371580-8371599 | None:intergenic | 10.0% |
| !! | AATTATTATAATTATTGTTG+TGG | + | chr2_1:8371580-8371599 | None:intergenic | 10.0% |
| !! | TACAACAATAATAATAACTA+TGG | - | chr2_1:8371758-8371777 | Msa0192570:CDS | 15.0% |
| !! | TACAACAATAATAATAACTA+TGG | - | chr2_1:8371758-8371777 | Msa0192570:CDS | 15.0% |
| !!! | TTGTAGTATTTGTTGTTGTT+GGG | + | chr2_1:8371383-8371402 | None:intergenic | 25.0% |
| !! | TATTACAACAAAGACACTTT+TGG | - | chr2_1:8371425-8371444 | Msa0192570:CDS | 25.0% |
| !! | AAATAACCAAAATGAGTTGA+GGG | - | chr2_1:8371448-8371467 | Msa0192570:CDS | 25.0% |
| ! | ATTATAATGCTCAGAATAAC+AGG | - | chr2_1:8371597-8371616 | Msa0192570:CDS | 25.0% |
| ! | AAATACAATCCAACAATGTA+TGG | - | chr2_1:8371698-8371717 | Msa0192570:CDS | 25.0% |
| !!! | TTGTAGTATTTGTTGTTGTT+GGG | + | chr2_1:8371383-8371402 | None:intergenic | 25.0% |
| !! | TATTACAACAAAGACACTTT+TGG | - | chr2_1:8371425-8371444 | Msa0192570:CDS | 25.0% |
| !! | AAATAACCAAAATGAGTTGA+GGG | - | chr2_1:8371448-8371467 | Msa0192570:CDS | 25.0% |
| ! | ATTATAATGCTCAGAATAAC+AGG | - | chr2_1:8371597-8371616 | Msa0192570:CDS | 25.0% |
| ! | AAATACAATCCAACAATGTA+TGG | - | chr2_1:8371698-8371717 | Msa0192570:CDS | 25.0% |
| TAAGAGGATGAAAGAAATGT+AGG | + | chr2_1:8371105-8371124 | None:intergenic | 30.0% | |
| CAAAATAGCTATGGCTTATA+TGG | - | chr2_1:8371278-8371297 | Msa0192570:CDS | 30.0% | |
| TGTGTCTTCAAAGTTAGAAT+TGG | + | chr2_1:8371351-8371370 | None:intergenic | 30.0% | |
| !! | TGTAGTATTTGTTGTTGTTG+GGG | + | chr2_1:8371382-8371401 | None:intergenic | 30.0% |
| !! | GTTGTAGTATTTGTTGTTGT+TGG | + | chr2_1:8371384-8371403 | None:intergenic | 30.0% |
| GAAATAACCAAAATGAGTTG+AGG | - | chr2_1:8371447-8371466 | Msa0192570:CDS | 30.0% | |
| !!! | GTTGTTTTGTTTTTCCATCA+TGG | + | chr2_1:8371504-8371523 | None:intergenic | 30.0% |
| GAGTGAACAACAATAATAAC+TGG | - | chr2_1:8371735-8371754 | Msa0192570:CDS | 30.0% | |
| TAAGAGGATGAAAGAAATGT+AGG | + | chr2_1:8371105-8371124 | None:intergenic | 30.0% | |
| CAAAATAGCTATGGCTTATA+TGG | - | chr2_1:8371278-8371297 | Msa0192570:CDS | 30.0% | |
| TGTGTCTTCAAAGTTAGAAT+TGG | + | chr2_1:8371351-8371370 | None:intergenic | 30.0% | |
| !! | TGTAGTATTTGTTGTTGTTG+GGG | + | chr2_1:8371382-8371401 | None:intergenic | 30.0% |
| !! | GTTGTAGTATTTGTTGTTGT+TGG | + | chr2_1:8371384-8371403 | None:intergenic | 30.0% |
| GAAATAACCAAAATGAGTTG+AGG | - | chr2_1:8371447-8371466 | Msa0192570:CDS | 30.0% | |
| !!! | GTTGTTTTGTTTTTCCATCA+TGG | + | chr2_1:8371504-8371523 | None:intergenic | 30.0% |
| GAGTGAACAACAATAATAAC+TGG | - | chr2_1:8371735-8371754 | Msa0192570:CDS | 30.0% | |
| GGATGAAAGAAATGTAGGTT+GGG | + | chr2_1:8371100-8371119 | None:intergenic | 35.0% | |
| AGGATGAAAGAAATGTAGGT+TGG | + | chr2_1:8371101-8371120 | None:intergenic | 35.0% | |
| GCAACAAAAGAGTTGTTAAG+AGG | + | chr2_1:8371121-8371140 | None:intergenic | 35.0% | |
| ! | TTTTGTGTCTGAGGAATGAA+AGG | + | chr2_1:8371263-8371282 | None:intergenic | 35.0% |
| TTCAAAGTTAGAATTGGTGG+TGG | + | chr2_1:8371345-8371364 | None:intergenic | 35.0% | |
| GTCTTCAAAGTTAGAATTGG+TGG | + | chr2_1:8371348-8371367 | None:intergenic | 35.0% | |
| GACACAAAGTACAATGAAGA+AGG | - | chr2_1:8371470-8371489 | Msa0192570:CDS | 35.0% | |
| TGTTGTTGAAGTAGTACTCT+TGG | + | chr2_1:8371529-8371548 | None:intergenic | 35.0% | |
| ! | GATGAGTGACACAAGATTTT+TGG | - | chr2_1:8371640-8371659 | Msa0192570:CDS | 35.0% |
| !! | AGTGACACAAGATTTTTGGA+AGG | - | chr2_1:8371644-8371663 | Msa0192570:CDS | 35.0% |
| GATGAATCACCATACATTGT+TGG | + | chr2_1:8371710-8371729 | None:intergenic | 35.0% | |
| ATGTATGGTGATTCATCTAG+AGG | - | chr2_1:8371713-8371732 | Msa0192570:CDS | 35.0% | |
| AATGAGTACCAGAATAACCA+TGG | - | chr2_1:8371788-8371807 | Msa0192570:CDS | 35.0% | |
| AATAACCATGGCAACTACAA+TGG | - | chr2_1:8371800-8371819 | Msa0192570:CDS | 35.0% | |
| CAATGGTTACAAAAACCAAG+AGG | - | chr2_1:8371817-8371836 | Msa0192570:CDS | 35.0% | |
| TTACAAAAACCAAGAGGAGT+TGG | - | chr2_1:8371823-8371842 | Msa0192570:CDS | 35.0% | |
| GGATGAAAGAAATGTAGGTT+GGG | + | chr2_1:8371100-8371119 | None:intergenic | 35.0% | |
| AGGATGAAAGAAATGTAGGT+TGG | + | chr2_1:8371101-8371120 | None:intergenic | 35.0% | |
| GCAACAAAAGAGTTGTTAAG+AGG | + | chr2_1:8371121-8371140 | None:intergenic | 35.0% | |
| ! | TTTTGTGTCTGAGGAATGAA+AGG | + | chr2_1:8371263-8371282 | None:intergenic | 35.0% |
| TTCAAAGTTAGAATTGGTGG+TGG | + | chr2_1:8371345-8371364 | None:intergenic | 35.0% | |
| GTCTTCAAAGTTAGAATTGG+TGG | + | chr2_1:8371348-8371367 | None:intergenic | 35.0% | |
| GACACAAAGTACAATGAAGA+AGG | - | chr2_1:8371470-8371489 | Msa0192570:CDS | 35.0% | |
| TGTTGTTGAAGTAGTACTCT+TGG | + | chr2_1:8371529-8371548 | None:intergenic | 35.0% | |
| ! | GATGAGTGACACAAGATTTT+TGG | - | chr2_1:8371640-8371659 | Msa0192570:CDS | 35.0% |
| !! | AGTGACACAAGATTTTTGGA+AGG | - | chr2_1:8371644-8371663 | Msa0192570:CDS | 35.0% |
| GATGAATCACCATACATTGT+TGG | + | chr2_1:8371710-8371729 | None:intergenic | 35.0% | |
| ATGTATGGTGATTCATCTAG+AGG | - | chr2_1:8371713-8371732 | Msa0192570:CDS | 35.0% | |
| AATGAGTACCAGAATAACCA+TGG | - | chr2_1:8371788-8371807 | Msa0192570:CDS | 35.0% | |
| AATAACCATGGCAACTACAA+TGG | - | chr2_1:8371800-8371819 | Msa0192570:CDS | 35.0% | |
| CAATGGTTACAAAAACCAAG+AGG | - | chr2_1:8371817-8371836 | Msa0192570:CDS | 35.0% | |
| TTACAAAAACCAAGAGGAGT+TGG | - | chr2_1:8371823-8371842 | Msa0192570:CDS | 35.0% | |
| ! | AGAAATGTAGGTTGGGAATG+TGG | + | chr2_1:8371093-8371112 | None:intergenic | 40.0% |
| ! | TCTCTGGCTATAGTTTGTAG+AGG | + | chr2_1:8371143-8371162 | None:intergenic | 40.0% |
| ACTGGGGATTCTTCTTTGTT+GGG | + | chr2_1:8371215-8371234 | None:intergenic | 40.0% | |
| AACTGGGGATTCTTCTTTGT+TGG | + | chr2_1:8371216-8371235 | None:intergenic | 40.0% | |
| !! | CTCTGGTTTGTTTGTAACTG+GGG | + | chr2_1:8371231-8371250 | None:intergenic | 40.0% |
| !! | CCTCTGGTTTGTTTGTAACT+GGG | + | chr2_1:8371232-8371251 | None:intergenic | 40.0% |
| !! | TCCTCTGGTTTGTTTGTAAC+TGG | + | chr2_1:8371233-8371252 | None:intergenic | 40.0% |
| !! | CCATAGCTATTTTGTGTCTG+AGG | + | chr2_1:8371272-8371291 | None:intergenic | 40.0% |
| CCTCAGACACAAAATAGCTA+TGG | - | chr2_1:8371269-8371288 | Msa0192570:CDS | 40.0% | |
| AAGGAATGTGATCAGAGTCA+TGG | + | chr2_1:8371304-8371323 | None:intergenic | 40.0% | |
| ! | TTGTGTCCCTCAACTCATTT+TGG | + | chr2_1:8371457-8371476 | None:intergenic | 40.0% |
| AGAAGGTTACAACTCCATGA+TGG | - | chr2_1:8371487-8371506 | Msa0192570:CDS | 40.0% | |
| GCTCAGAATAACAGGTACAA+TGG | - | chr2_1:8371605-8371624 | Msa0192570:CDS | 40.0% | |
| AGGTACAATGGTGAGAAACA+AGG | - | chr2_1:8371617-8371636 | Msa0192570:CDS | 40.0% | |
| GGTACAATGGTGAGAAACAA+GGG | - | chr2_1:8371618-8371637 | Msa0192570:CDS | 40.0% | |
| !! | GACACAAGATTTTTGGAAGG+TGG | - | chr2_1:8371647-8371666 | Msa0192570:CDS | 40.0% |
| TGTAGTTGCCATGGTTATTC+TGG | + | chr2_1:8371799-8371818 | None:intergenic | 40.0% | |
| TGTAACCATTGTAGTTGCCA+TGG | + | chr2_1:8371808-8371827 | None:intergenic | 40.0% | |
| ! | GTTCATTTTCCAACTCCTCT+TGG | + | chr2_1:8371835-8371854 | None:intergenic | 40.0% |
| ! | AGAAATGTAGGTTGGGAATG+TGG | + | chr2_1:8371093-8371112 | None:intergenic | 40.0% |
| ! | TCTCTGGCTATAGTTTGTAG+AGG | + | chr2_1:8371143-8371162 | None:intergenic | 40.0% |
| ACTGGGGATTCTTCTTTGTT+GGG | + | chr2_1:8371215-8371234 | None:intergenic | 40.0% | |
| AACTGGGGATTCTTCTTTGT+TGG | + | chr2_1:8371216-8371235 | None:intergenic | 40.0% | |
| !! | CTCTGGTTTGTTTGTAACTG+GGG | + | chr2_1:8371231-8371250 | None:intergenic | 40.0% |
| !! | CCTCTGGTTTGTTTGTAACT+GGG | + | chr2_1:8371232-8371251 | None:intergenic | 40.0% |
| !! | TCCTCTGGTTTGTTTGTAAC+TGG | + | chr2_1:8371233-8371252 | None:intergenic | 40.0% |
| !! | CCATAGCTATTTTGTGTCTG+AGG | + | chr2_1:8371272-8371291 | None:intergenic | 40.0% |
| CCTCAGACACAAAATAGCTA+TGG | - | chr2_1:8371269-8371288 | Msa0192570:CDS | 40.0% | |
| AAGGAATGTGATCAGAGTCA+TGG | + | chr2_1:8371304-8371323 | None:intergenic | 40.0% | |
| ! | TTGTGTCCCTCAACTCATTT+TGG | + | chr2_1:8371457-8371476 | None:intergenic | 40.0% |
| AGAAGGTTACAACTCCATGA+TGG | - | chr2_1:8371487-8371506 | Msa0192570:CDS | 40.0% | |
| GCTCAGAATAACAGGTACAA+TGG | - | chr2_1:8371605-8371624 | Msa0192570:CDS | 40.0% | |
| AGGTACAATGGTGAGAAACA+AGG | - | chr2_1:8371617-8371636 | Msa0192570:CDS | 40.0% | |
| GGTACAATGGTGAGAAACAA+GGG | - | chr2_1:8371618-8371637 | Msa0192570:CDS | 40.0% | |
| !! | GACACAAGATTTTTGGAAGG+TGG | - | chr2_1:8371647-8371666 | Msa0192570:CDS | 40.0% |
| TGTAGTTGCCATGGTTATTC+TGG | + | chr2_1:8371799-8371818 | None:intergenic | 40.0% | |
| TGTAACCATTGTAGTTGCCA+TGG | + | chr2_1:8371808-8371827 | None:intergenic | 40.0% | |
| ! | GTTCATTTTCCAACTCCTCT+TGG | + | chr2_1:8371835-8371854 | None:intergenic | 40.0% |
| GCTGAAGAATTCACTCTCTC+TGG | + | chr2_1:8371159-8371178 | None:intergenic | 45.0% | |
| CCCAGTTACAAACAAACCAG+AGG | - | chr2_1:8371229-8371248 | Msa0192570:CDS | 45.0% | |
| TGTGTCTGAGGAATGAAAGG+TGG | + | chr2_1:8371260-8371279 | None:intergenic | 45.0% | |
| GCTGAAGAATTCACTCTCTC+TGG | + | chr2_1:8371159-8371178 | None:intergenic | 45.0% | |
| CCCAGTTACAAACAAACCAG+AGG | - | chr2_1:8371229-8371248 | Msa0192570:CDS | 45.0% | |
| TGTGTCTGAGGAATGAAAGG+TGG | + | chr2_1:8371260-8371279 | None:intergenic | 45.0% | |
| ATGAAAGGTGGTTGCTCCTC+TGG | + | chr2_1:8371248-8371267 | None:intergenic | 50.0% | |
| ATGAAAGGTGGTTGCTCCTC+TGG | + | chr2_1:8371248-8371267 | None:intergenic | 50.0% | |
| !! | AGAATTGGTGGTGGATGCCG+TGG | + | chr2_1:8371336-8371355 | None:intergenic | 55.0% |
| !! | AGAATTGGTGGTGGATGCCG+TGG | + | chr2_1:8371336-8371355 | None:intergenic | 55.0% |
| !! | ATTGGTGGTGGATGCCGTGG+CGG | + | chr2_1:8371333-8371352 | None:intergenic | 60.0% |
| !! | ATTGGTGGTGGATGCCGTGG+CGG | + | chr2_1:8371333-8371352 | None:intergenic | 60.0% |
| CATTCCTTCCACCGCCGCCA+CGG | - | chr2_1:8371316-8371335 | Msa0192570:CDS | 65.0% | |
| CATTCCTTCCACCGCCGCCA+CGG | - | chr2_1:8371316-8371335 | Msa0192570:CDS | 65.0% | |
| GATGCCGTGGCGGCGGTGGA+AGG | + | chr2_1:8371323-8371342 | None:intergenic | 75.0% | |
| !! | GGTGGTGGATGCCGTGGCGG+CGG | + | chr2_1:8371330-8371349 | None:intergenic | 75.0% |
| GATGCCGTGGCGGCGGTGGA+AGG | + | chr2_1:8371323-8371342 | None:intergenic | 75.0% | |
| !! | GGTGGTGGATGCCGTGGCGG+CGG | + | chr2_1:8371330-8371349 | None:intergenic | 75.0% |
| ! | GGTGGATGCCGTGGCGGCGG+TGG | + | chr2_1:8371327-8371346 | None:intergenic | 80.0% |
| ! | GGTGGATGCCGTGGCGGCGG+TGG | + | chr2_1:8371327-8371346 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 8371086 | 8371880 | 8371086 | ID=Msa0192570;Name=Msa0192570 |
| chr2_1 | mRNA | 8371086 | 8371880 | 8371086 | ID=Msa0192570-mRNA-1;Parent=Msa0192570;Name=Msa0192570-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|264 |
| chr2_1 | exon | 8371086 | 8371880 | 8371086 | ID=Msa0192570-mRNA-1:exon:3839;Parent=Msa0192570-mRNA-1 |
| chr2_1 | CDS | 8371086 | 8371880 | 8371086 | ID=Msa0192570-mRNA-1:cds;Parent=Msa0192570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
