Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0314590 | KEH36666.1 | 93.410 | 349 | 23 | 0 | 1 | 349 | 1 | 349 | 0.0 | 677 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0314590 | sp|Q9C7N4|GDL15_ARATH | 44.715 | 369 | 166 | 9 | 1 | 338 | 1 | 362 | 1.59e-100 | 304 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0194350 | Msa0314590 | 0.853019 | 3.150975e-61 | -8.615850e-47 |
Msa0236190 | Msa0314590 | 0.941137 | 7.013382e-101 | -8.615850e-47 |
Msa0274040 | Msa0314590 | 0.831315 | 1.790096e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0314590 | MtrunA17_Chr2g0284941 | 93.410 | 349 | 23 | 0 | 1 | 349 | 1 | 349 | 0.0 | 677 |
Msa0314590 | MtrunA17_Chr2g0285001 | 77.089 | 371 | 63 | 3 | 1 | 349 | 1 | 371 | 0.0 | 566 |
Msa0314590 | MtrunA17_Chr2g0284951 | 77.027 | 370 | 59 | 4 | 1 | 349 | 1 | 365 | 0.0 | 561 |
Msa0314590 | MtrunA17_Chr2g0284991 | 74.387 | 367 | 73 | 2 | 1 | 346 | 1 | 367 | 0.0 | 558 |
Msa0314590 | MtrunA17_Chr2g0284921 | 58.146 | 356 | 125 | 5 | 6 | 338 | 6 | 360 | 1.01e-132 | 383 |
Msa0314590 | MtrunA17_Chr3g0085881 | 55.493 | 355 | 138 | 4 | 1 | 338 | 1 | 352 | 1.21e-126 | 367 |
Msa0314590 | MtrunA17_Chr8g0380031 | 55.432 | 359 | 130 | 7 | 1 | 338 | 56 | 405 | 8.28e-124 | 362 |
Msa0314590 | MtrunA17_Chr8g0380041 | 44.959 | 367 | 166 | 9 | 1 | 338 | 3 | 362 | 6.43e-99 | 296 |
Msa0314590 | MtrunA17_Chr3g0086641 | 43.443 | 366 | 174 | 8 | 3 | 338 | 7 | 369 | 1.98e-94 | 285 |
Msa0314590 | MtrunA17_Chr2g0285061 | 43.662 | 355 | 166 | 8 | 13 | 338 | 15 | 364 | 6.62e-93 | 281 |
Msa0314590 | MtrunA17_Chr3g0077581 | 41.509 | 371 | 180 | 7 | 1 | 337 | 1 | 368 | 1.60e-87 | 268 |
Msa0314590 | MtrunA17_Chr3g0077571 | 39.503 | 362 | 185 | 9 | 4 | 338 | 2 | 356 | 1.75e-75 | 236 |
Msa0314590 | MtrunA17_Chr3g0131321 | 37.701 | 374 | 191 | 11 | 5 | 341 | 3 | 371 | 2.37e-69 | 222 |
Msa0314590 | MtrunA17_Chr4g0017431 | 35.792 | 366 | 196 | 11 | 5 | 338 | 4 | 362 | 1.36e-61 | 201 |
Msa0314590 | MtrunA17_Chr2g0284931 | 48.148 | 216 | 108 | 3 | 126 | 338 | 5 | 219 | 1.84e-57 | 186 |
Msa0314590 | MtrunA17_Chr7g0275021 | 35.103 | 339 | 186 | 9 | 29 | 337 | 30 | 364 | 3.08e-53 | 179 |
Msa0314590 | MtrunA17_Chr4g0068441 | 36.023 | 347 | 183 | 12 | 25 | 338 | 27 | 367 | 8.75e-53 | 178 |
Msa0314590 | MtrunA17_Chr5g0434621 | 36.792 | 318 | 167 | 10 | 34 | 321 | 26 | 339 | 4.25e-52 | 176 |
Msa0314590 | MtrunA17_Chr2g0294311 | 34.595 | 370 | 195 | 11 | 9 | 338 | 10 | 372 | 1.84e-51 | 175 |
Msa0314590 | MtrunA17_Chr7g0275011 | 31.351 | 370 | 194 | 10 | 9 | 337 | 14 | 364 | 8.81e-50 | 170 |
Msa0314590 | MtrunA17_Chr1g0189901 | 33.036 | 336 | 191 | 10 | 35 | 340 | 33 | 364 | 9.80e-50 | 170 |
Msa0314590 | MtrunA17_Chr2g0294301 | 35.976 | 328 | 173 | 11 | 30 | 324 | 32 | 355 | 7.71e-49 | 168 |
Msa0314590 | MtrunA17_Chr1g0182811 | 30.214 | 374 | 221 | 10 | 1 | 340 | 1 | 368 | 4.72e-48 | 166 |
Msa0314590 | MtrunA17_Chr1g0189931 | 32.440 | 336 | 193 | 9 | 35 | 340 | 34 | 365 | 5.86e-48 | 166 |
Msa0314590 | MtrunA17_Chr2g0285041 | 65.546 | 119 | 40 | 1 | 86 | 203 | 1 | 119 | 6.10e-48 | 159 |
Msa0314590 | MtrunA17_Chr7g0275001 | 32.164 | 342 | 193 | 9 | 29 | 337 | 21 | 356 | 8.88e-47 | 162 |
Msa0314590 | MtrunA17_Chr8g0374101 | 31.421 | 366 | 209 | 12 | 9 | 336 | 12 | 373 | 5.22e-46 | 160 |
Msa0314590 | MtrunA17_Chr3g0085231 | 34.454 | 357 | 202 | 12 | 4 | 338 | 3 | 349 | 3.20e-44 | 155 |
Msa0314590 | MtrunA17_Chr7g0274991 | 31.287 | 342 | 203 | 7 | 25 | 337 | 25 | 363 | 9.76e-44 | 154 |
Msa0314590 | MtrunA17_Chr3g0099231 | 31.414 | 382 | 210 | 15 | 1 | 345 | 1 | 367 | 1.98e-43 | 154 |
Msa0314590 | MtrunA17_Chr4g0060811 | 35.938 | 320 | 161 | 11 | 35 | 318 | 29 | 340 | 7.07e-43 | 152 |
Msa0314590 | MtrunA17_Chr3g0092131 | 36.522 | 345 | 179 | 14 | 5 | 318 | 1 | 336 | 1.21e-42 | 151 |
Msa0314590 | MtrunA17_Chr1g0189891 | 32.941 | 340 | 191 | 9 | 35 | 345 | 31 | 362 | 1.28e-42 | 151 |
Msa0314590 | MtrunA17_Chr4g0008851 | 29.919 | 371 | 208 | 10 | 10 | 340 | 9 | 367 | 1.49e-42 | 151 |
Msa0314590 | MtrunA17_Chr6g0457921 | 32.174 | 345 | 198 | 9 | 25 | 337 | 20 | 360 | 4.32e-42 | 150 |
Msa0314590 | MtrunA17_Chr1g0156911 | 31.250 | 320 | 183 | 9 | 29 | 316 | 33 | 347 | 8.13e-42 | 149 |
Msa0314590 | MtrunA17_Chr5g0444401 | 32.070 | 343 | 189 | 13 | 31 | 337 | 26 | 360 | 8.15e-42 | 149 |
Msa0314590 | MtrunA17_Chr3g0099151 | 33.048 | 351 | 184 | 15 | 27 | 337 | 81 | 420 | 1.48e-41 | 150 |
Msa0314590 | MtrunA17_Chr5g0396511 | 31.361 | 338 | 195 | 12 | 35 | 340 | 48 | 380 | 1.34e-39 | 144 |
Msa0314590 | MtrunA17_Chr2g0320671 | 33.043 | 345 | 189 | 14 | 5 | 315 | 4 | 340 | 1.03e-38 | 140 |
Msa0314590 | MtrunA17_Chr1g0156921 | 31.105 | 344 | 193 | 13 | 9 | 314 | 14 | 351 | 1.13e-38 | 141 |
Msa0314590 | MtrunA17_Chr1g0156891 | 32.353 | 340 | 179 | 13 | 13 | 311 | 20 | 349 | 1.47e-38 | 140 |
Msa0314590 | MtrunA17_Chr3g0099161 | 33.521 | 355 | 176 | 15 | 27 | 337 | 86 | 424 | 2.79e-38 | 141 |
Msa0314590 | MtrunA17_Chr5g0420811 | 30.960 | 323 | 176 | 12 | 29 | 319 | 29 | 336 | 1.14e-37 | 138 |
Msa0314590 | MtrunA17_Chr7g0215961 | 29.730 | 333 | 187 | 10 | 35 | 337 | 35 | 350 | 2.39e-37 | 137 |
Msa0314590 | MtrunA17_Chr1g0156901 | 29.630 | 351 | 193 | 14 | 3 | 311 | 17 | 355 | 3.78e-37 | 137 |
Msa0314590 | MtrunA17_Chr5g0405831 | 31.915 | 329 | 175 | 11 | 31 | 320 | 41 | 359 | 8.45e-37 | 136 |
Msa0314590 | MtrunA17_Chr3g0105401 | 30.029 | 343 | 200 | 11 | 8 | 318 | 8 | 342 | 1.05e-36 | 135 |
Msa0314590 | MtrunA17_Chr5g0405821 | 32.923 | 325 | 178 | 11 | 31 | 320 | 41 | 360 | 1.13e-36 | 135 |
Msa0314590 | MtrunA17_Chr8g0341001 | 29.912 | 341 | 200 | 12 | 13 | 318 | 10 | 346 | 1.13e-36 | 135 |
Msa0314590 | MtrunA17_Chr2g0284981 | 73.418 | 79 | 21 | 0 | 268 | 346 | 9 | 87 | 2.12e-36 | 127 |
Msa0314590 | MtrunA17_Chr8g0371491 | 30.347 | 346 | 197 | 11 | 11 | 320 | 14 | 351 | 2.72e-36 | 134 |
Msa0314590 | MtrunA17_Chr2g0330781 | 31.579 | 323 | 180 | 10 | 31 | 318 | 29 | 345 | 2.73e-36 | 134 |
Msa0314590 | MtrunA17_Chr5g0438621 | 29.683 | 347 | 197 | 13 | 4 | 315 | 6 | 340 | 7.24e-36 | 133 |
Msa0314590 | MtrunA17_Chr8g0370951 | 29.167 | 360 | 209 | 13 | 4 | 323 | 1 | 354 | 1.46e-34 | 130 |
Msa0314590 | MtrunA17_Chr5g0432101 | 30.368 | 326 | 187 | 11 | 28 | 318 | 28 | 348 | 1.60e-34 | 130 |
Msa0314590 | MtrunA17_Chr1g0156931 | 30.671 | 313 | 179 | 10 | 31 | 311 | 39 | 345 | 1.75e-34 | 129 |
Msa0314590 | MtrunA17_Chr4g0027521 | 31.861 | 317 | 177 | 10 | 28 | 309 | 22 | 334 | 1.85e-34 | 129 |
Msa0314590 | MtrunA17_Chr3g0142941 | 29.653 | 317 | 178 | 9 | 31 | 311 | 45 | 352 | 1.40e-33 | 127 |
Msa0314590 | MtrunA17_Chr4g0046151 | 27.299 | 348 | 205 | 12 | 13 | 317 | 15 | 357 | 5.91e-33 | 125 |
Msa0314590 | MtrunA17_Chr3g0142921 | 30.696 | 316 | 175 | 11 | 32 | 311 | 35 | 342 | 7.73e-33 | 125 |
Msa0314590 | MtrunA17_Chr3g0120861 | 30.031 | 323 | 188 | 11 | 26 | 315 | 31 | 348 | 9.61e-33 | 125 |
Msa0314590 | MtrunA17_Chr2g0301641 | 30.114 | 352 | 190 | 14 | 34 | 343 | 44 | 381 | 2.52e-32 | 124 |
Msa0314590 | MtrunA17_Chr5g0438631 | 28.739 | 341 | 201 | 10 | 1 | 308 | 1 | 332 | 2.69e-32 | 123 |
Msa0314590 | MtrunA17_Chr5g0438641 | 31.230 | 317 | 172 | 15 | 29 | 308 | 28 | 335 | 7.96e-32 | 122 |
Msa0314590 | MtrunA17_Chr8g0349321 | 29.834 | 362 | 203 | 14 | 14 | 339 | 19 | 365 | 9.86e-32 | 122 |
Msa0314590 | MtrunA17_Chr8g0349341 | 30.663 | 362 | 200 | 15 | 14 | 339 | 19 | 365 | 3.75e-31 | 120 |
Msa0314590 | MtrunA17_Chr1g0157001 | 30.383 | 339 | 189 | 13 | 38 | 336 | 41 | 372 | 9.04e-31 | 120 |
Msa0314590 | MtrunA17_Chr8g0371471 | 28.291 | 357 | 215 | 13 | 3 | 322 | 6 | 358 | 2.80e-30 | 118 |
Msa0314590 | MtrunA17_Chr5g0437421 | 28.923 | 325 | 188 | 9 | 25 | 311 | 24 | 343 | 2.97e-30 | 118 |
Msa0314590 | MtrunA17_Chr8g0371481 | 27.933 | 358 | 216 | 13 | 3 | 322 | 6 | 359 | 1.48e-28 | 114 |
Msa0314590 | MtrunA17_Chr2g0283191 | 28.000 | 325 | 187 | 10 | 29 | 311 | 34 | 353 | 3.51e-28 | 112 |
Msa0314590 | MtrunA17_Chr8g0344931 | 28.451 | 355 | 206 | 12 | 16 | 338 | 22 | 360 | 3.56e-28 | 112 |
Msa0314590 | MtrunA17_Chr8g0344941 | 29.607 | 331 | 186 | 12 | 33 | 325 | 41 | 362 | 5.41e-28 | 112 |
Msa0314590 | MtrunA17_Chr7g0229591 | 34.359 | 195 | 121 | 5 | 10 | 201 | 7 | 197 | 5.63e-27 | 105 |
Msa0314590 | MtrunA17_Chr6g0455661 | 28.571 | 245 | 145 | 5 | 121 | 338 | 230 | 471 | 9.80e-26 | 107 |
Msa0314590 | MtrunA17_Chr6g0455661 | 47.748 | 111 | 47 | 3 | 32 | 142 | 30 | 129 | 1.05e-24 | 104 |
Msa0314590 | MtrunA17_Chr8g0349301 | 33.495 | 206 | 121 | 6 | 14 | 217 | 19 | 210 | 2.17e-25 | 104 |
Msa0314590 | MtrunA17_Chr6g0459921 | 28.333 | 240 | 142 | 5 | 126 | 338 | 124 | 360 | 6.63e-25 | 103 |
Msa0314590 | MtrunA17_Chr6g0469511 | 44.444 | 126 | 64 | 4 | 18 | 139 | 15 | 138 | 5.53e-23 | 93.2 |
Msa0314590 | MtrunA17_Chr2g0285051 | 70.968 | 62 | 18 | 0 | 26 | 87 | 29 | 90 | 7.02e-22 | 89.7 |
Msa0314590 | MtrunA17_Chr4g0027561 | 41.739 | 115 | 64 | 2 | 10 | 121 | 7 | 121 | 1.69e-21 | 89.4 |
Msa0314590 | MtrunA17_Chr8g0370981 | 31.278 | 227 | 135 | 7 | 9 | 222 | 19 | 237 | 3.66e-21 | 94.0 |
Msa0314590 | MtrunA17_Chr8g0370971 | 42.500 | 120 | 61 | 3 | 10 | 121 | 14 | 133 | 2.51e-18 | 81.3 |
Msa0314590 | MtrunA17_Chr2g0285031 | 50.667 | 75 | 37 | 0 | 268 | 342 | 7 | 81 | 2.70e-18 | 78.6 |
Msa0314590 | MtrunA17_Chr1g0189921 | 47.191 | 89 | 45 | 2 | 35 | 121 | 33 | 121 | 4.58e-18 | 80.1 |
Msa0314590 | MtrunA17_Chr2g0321991 | 45.745 | 94 | 46 | 3 | 27 | 116 | 27 | 119 | 5.21e-18 | 79.3 |
Msa0314590 | MtrunA17_Chr2g0308201 | 49.398 | 83 | 41 | 1 | 4 | 86 | 7 | 88 | 2.60e-17 | 76.3 |
Msa0314590 | MtrunA17_Chr6g0450721 | 25.989 | 354 | 193 | 15 | 23 | 331 | 23 | 352 | 6.63e-17 | 80.9 |
Msa0314590 | MtrunA17_Chr8g0349331 | 24.561 | 342 | 178 | 11 | 34 | 339 | 36 | 333 | 2.16e-16 | 79.0 |
Msa0314590 | MtrunA17_Chr1g0178931 | 25.157 | 318 | 174 | 14 | 34 | 311 | 38 | 331 | 3.43e-15 | 75.9 |
Msa0314590 | MtrunA17_Chr1g0160031 | 25.137 | 366 | 207 | 12 | 1 | 309 | 1 | 356 | 6.73e-15 | 75.1 |
Msa0314590 | MtrunA17_Chr6g0450731 | 24.633 | 341 | 202 | 13 | 23 | 322 | 23 | 349 | 6.78e-15 | 75.1 |
Msa0314590 | MtrunA17_Chr1g0198351 | 26.462 | 325 | 161 | 18 | 34 | 311 | 44 | 337 | 4.21e-14 | 72.4 |
Msa0314590 | MtrunA17_Chr1g0160011 | 25.862 | 232 | 145 | 8 | 9 | 231 | 25 | 238 | 1.01e-13 | 71.6 |
Msa0314590 | MtrunA17_Chr2g0283511 | 27.671 | 365 | 201 | 19 | 6 | 318 | 5 | 358 | 1.95e-13 | 70.9 |
Msa0314590 | MtrunA17_Chr3g0104821 | 24.484 | 339 | 193 | 12 | 34 | 320 | 45 | 372 | 2.85e-13 | 70.1 |
Msa0314590 | MtrunA17_Chr1g0178941 | 23.602 | 322 | 182 | 9 | 34 | 311 | 41 | 342 | 6.09e-13 | 68.9 |
Msa0314590 | MtrunA17_Chr4g0018561 | 42.466 | 73 | 41 | 1 | 10 | 81 | 7 | 79 | 1.75e-12 | 63.2 |
Msa0314590 | MtrunA17_Chr1g0160101 | 21.543 | 376 | 227 | 9 | 9 | 330 | 18 | 379 | 2.67e-12 | 67.4 |
Msa0314590 | MtrunA17_Chr3g0104801 | 36.842 | 95 | 57 | 2 | 33 | 125 | 44 | 137 | 3.05e-12 | 64.7 |
Msa0314590 | MtrunA17_Chr2g0283501 | 26.016 | 246 | 155 | 8 | 3 | 235 | 7 | 238 | 2.47e-11 | 64.3 |
Msa0314590 | MtrunA17_Chr8g0352901 | 23.446 | 354 | 208 | 14 | 9 | 309 | 4 | 347 | 4.11e-11 | 63.5 |
Msa0314590 | MtrunA17_Chr1g0159991 | 25.217 | 230 | 154 | 6 | 9 | 229 | 12 | 232 | 5.17e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0314590 | AT1G29670.1 | 44.715 | 369 | 166 | 9 | 1 | 338 | 1 | 362 | 1.61e-101 | 304 |
Msa0314590 | AT1G29670.2 | 44.715 | 369 | 166 | 9 | 1 | 338 | 69 | 430 | 1.83e-100 | 303 |
Msa0314590 | AT1G29660.1 | 43.324 | 367 | 175 | 7 | 1 | 338 | 1 | 363 | 1.96e-98 | 296 |
Msa0314590 | AT4G18970.1 | 44.807 | 337 | 155 | 7 | 31 | 338 | 26 | 360 | 3.07e-93 | 283 |
Msa0314590 | AT5G45670.1 | 42.577 | 357 | 174 | 7 | 10 | 337 | 6 | 360 | 3.89e-93 | 282 |
Msa0314590 | AT4G18970.2 | 44.807 | 337 | 155 | 7 | 31 | 338 | 26 | 360 | 4.87e-92 | 281 |
Msa0314590 | AT1G33811.1 | 40.407 | 344 | 169 | 6 | 27 | 337 | 28 | 368 | 5.10e-85 | 262 |
Msa0314590 | AT2G19010.1 | 41.840 | 337 | 159 | 6 | 8 | 320 | 10 | 333 | 4.58e-82 | 253 |
Msa0314590 | AT2G19010.2 | 41.840 | 337 | 159 | 6 | 8 | 320 | 40 | 363 | 2.17e-81 | 253 |
Msa0314590 | AT2G19050.1 | 42.038 | 314 | 150 | 6 | 30 | 319 | 28 | 333 | 1.21e-74 | 234 |
Msa0314590 | AT1G71691.2 | 36.873 | 339 | 182 | 7 | 26 | 337 | 48 | 381 | 4.00e-71 | 226 |
Msa0314590 | AT4G30140.1 | 40.122 | 329 | 165 | 4 | 30 | 337 | 30 | 347 | 6.50e-67 | 214 |
Msa0314590 | AT2G19060.1 | 41.447 | 304 | 146 | 6 | 31 | 309 | 28 | 324 | 1.13e-66 | 214 |
Msa0314590 | AT5G08460.1 | 35.561 | 374 | 197 | 11 | 1 | 336 | 15 | 382 | 8.61e-65 | 210 |
Msa0314590 | AT2G19050.2 | 45.565 | 248 | 107 | 4 | 30 | 257 | 28 | 267 | 1.17e-64 | 206 |
Msa0314590 | AT5G15720.1 | 38.109 | 349 | 178 | 10 | 23 | 338 | 20 | 363 | 1.46e-62 | 204 |
Msa0314590 | AT1G71250.1 | 35.000 | 360 | 196 | 10 | 10 | 336 | 16 | 370 | 3.79e-56 | 187 |
Msa0314590 | AT1G71691.3 | 39.841 | 251 | 129 | 4 | 26 | 257 | 48 | 295 | 8.45e-56 | 185 |
Msa0314590 | AT3G50400.1 | 33.957 | 374 | 203 | 13 | 6 | 338 | 3 | 373 | 2.21e-50 | 172 |
Msa0314590 | AT5G37690.1 | 34.177 | 316 | 174 | 10 | 34 | 319 | 28 | 339 | 4.73e-48 | 166 |
Msa0314590 | AT4G28780.1 | 30.811 | 370 | 214 | 11 | 1 | 337 | 1 | 361 | 2.89e-47 | 164 |
Msa0314590 | AT3G04290.1 | 33.432 | 338 | 173 | 10 | 35 | 333 | 31 | 355 | 8.55e-47 | 163 |
Msa0314590 | AT5G15720.2 | 40.873 | 252 | 131 | 6 | 23 | 260 | 20 | 267 | 2.38e-46 | 160 |
Msa0314590 | AT5G33370.1 | 31.967 | 366 | 194 | 11 | 14 | 337 | 8 | 360 | 3.26e-46 | 161 |
Msa0314590 | AT1G71691.1 | 31.095 | 283 | 163 | 7 | 82 | 337 | 3 | 280 | 1.97e-45 | 157 |
Msa0314590 | AT4G16230.1 | 43.119 | 218 | 114 | 5 | 9 | 223 | 11 | 221 | 3.31e-45 | 155 |
Msa0314590 | AT2G23540.1 | 33.645 | 321 | 174 | 10 | 35 | 318 | 50 | 368 | 1.51e-44 | 157 |
Msa0314590 | AT1G74460.1 | 37.812 | 320 | 149 | 14 | 35 | 315 | 25 | 333 | 4.02e-44 | 155 |
Msa0314590 | AT5G18430.1 | 33.333 | 333 | 182 | 10 | 35 | 333 | 30 | 356 | 1.94e-42 | 151 |
Msa0314590 | AT5G37690.2 | 32.278 | 316 | 172 | 11 | 34 | 319 | 28 | 331 | 2.67e-42 | 150 |
Msa0314590 | AT3G43570.1 | 33.333 | 330 | 182 | 15 | 8 | 321 | 7 | 314 | 8.81e-41 | 145 |
Msa0314590 | AT1G59406.1 | 32.378 | 349 | 187 | 14 | 9 | 321 | 8 | 343 | 3.94e-40 | 145 |
Msa0314590 | AT1G59030.1 | 32.378 | 349 | 187 | 14 | 9 | 321 | 8 | 343 | 3.94e-40 | 145 |
Msa0314590 | AT1G58725.1 | 32.378 | 349 | 187 | 14 | 9 | 321 | 8 | 343 | 3.94e-40 | 145 |
Msa0314590 | AT5G42170.1 | 34.259 | 324 | 166 | 12 | 31 | 318 | 48 | 360 | 2.30e-39 | 143 |
Msa0314590 | AT5G63170.1 | 29.394 | 330 | 195 | 9 | 9 | 311 | 4 | 322 | 2.33e-39 | 142 |
Msa0314590 | AT1G75880.1 | 30.854 | 363 | 207 | 13 | 3 | 327 | 19 | 375 | 9.61e-39 | 142 |
Msa0314590 | AT1G75880.2 | 30.854 | 363 | 206 | 13 | 3 | 327 | 19 | 374 | 1.69e-38 | 141 |
Msa0314590 | AT1G75890.2 | 30.878 | 353 | 195 | 14 | 8 | 320 | 20 | 363 | 2.32e-38 | 140 |
Msa0314590 | AT5G15720.3 | 34.286 | 280 | 148 | 9 | 92 | 338 | 56 | 332 | 2.36e-38 | 139 |
Msa0314590 | AT1G75890.3 | 30.878 | 353 | 195 | 14 | 8 | 320 | 49 | 392 | 3.73e-38 | 140 |
Msa0314590 | AT2G04570.1 | 31.214 | 346 | 198 | 11 | 10 | 322 | 7 | 345 | 1.75e-37 | 138 |
Msa0314590 | AT5G55050.1 | 30.986 | 355 | 200 | 13 | 21 | 337 | 27 | 374 | 4.97e-37 | 137 |
Msa0314590 | AT3G14820.1 | 32.407 | 324 | 175 | 12 | 29 | 318 | 28 | 341 | 5.27e-37 | 136 |
Msa0314590 | AT5G41890.1 | 31.105 | 344 | 191 | 10 | 35 | 336 | 33 | 372 | 5.93e-37 | 137 |
Msa0314590 | AT3G53100.1 | 31.195 | 343 | 187 | 11 | 14 | 318 | 11 | 342 | 7.04e-37 | 136 |
Msa0314590 | AT1G75890.1 | 30.411 | 365 | 194 | 16 | 8 | 320 | 20 | 376 | 2.37e-36 | 135 |
Msa0314590 | AT5G22810.1 | 32.479 | 351 | 190 | 14 | 8 | 318 | 7 | 350 | 9.51e-36 | 133 |
Msa0314590 | AT1G20135.1 | 30.746 | 335 | 187 | 14 | 5 | 311 | 6 | 323 | 1.92e-35 | 132 |
Msa0314590 | AT4G10950.2 | 29.118 | 340 | 204 | 11 | 31 | 338 | 69 | 403 | 2.01e-35 | 133 |
Msa0314590 | AT1G58520.3 | 31.940 | 335 | 182 | 15 | 18 | 321 | 17 | 336 | 2.86e-35 | 132 |
Msa0314590 | AT1G58525.1 | 31.940 | 335 | 182 | 15 | 18 | 321 | 17 | 336 | 2.86e-35 | 132 |
Msa0314590 | AT1G20130.2 | 32.722 | 327 | 177 | 10 | 27 | 314 | 178 | 500 | 7.23e-35 | 134 |
Msa0314590 | AT1G20130.1 | 32.722 | 327 | 177 | 10 | 27 | 314 | 198 | 520 | 9.41e-35 | 134 |
Msa0314590 | AT1G73610.1 | 29.688 | 320 | 186 | 11 | 29 | 321 | 31 | 338 | 2.04e-34 | 129 |
Msa0314590 | AT2G30310.1 | 30.612 | 343 | 187 | 13 | 9 | 311 | 11 | 342 | 2.61e-34 | 129 |
Msa0314590 | AT2G30220.1 | 31.487 | 343 | 183 | 15 | 9 | 311 | 11 | 341 | 4.90e-34 | 129 |
Msa0314590 | AT3G16370.1 | 30.435 | 322 | 185 | 12 | 31 | 318 | 28 | 344 | 7.69e-34 | 128 |
Msa0314590 | AT5G03820.1 | 28.286 | 350 | 210 | 13 | 5 | 318 | 4 | 348 | 1.07e-33 | 128 |
Msa0314590 | AT5G03820.2 | 28.286 | 350 | 210 | 13 | 5 | 318 | 32 | 376 | 1.89e-33 | 127 |
Msa0314590 | AT4G10950.1 | 29.118 | 340 | 200 | 12 | 31 | 338 | 69 | 399 | 2.57e-33 | 127 |
Msa0314590 | AT2G42990.1 | 28.267 | 329 | 198 | 10 | 29 | 324 | 24 | 347 | 1.89e-32 | 124 |
Msa0314590 | AT2G31540.1 | 30.372 | 349 | 200 | 13 | 3 | 315 | 6 | 347 | 2.34e-32 | 124 |
Msa0314590 | AT3G43550.1 | 35.398 | 226 | 127 | 8 | 8 | 229 | 7 | 217 | 4.25e-32 | 122 |
Msa0314590 | AT5G33370.2 | 31.834 | 289 | 151 | 8 | 14 | 267 | 8 | 285 | 6.72e-32 | 122 |
Msa0314590 | AT1G20132.1 | 30.000 | 330 | 177 | 12 | 32 | 320 | 60 | 376 | 1.27e-31 | 122 |
Msa0314590 | AT2G03980.2 | 28.882 | 322 | 185 | 9 | 22 | 308 | 32 | 344 | 1.59e-31 | 122 |
Msa0314590 | AT2G03980.3 | 28.882 | 322 | 185 | 9 | 22 | 308 | 32 | 344 | 1.59e-31 | 122 |
Msa0314590 | AT2G03980.1 | 28.882 | 322 | 185 | 9 | 22 | 308 | 32 | 344 | 1.59e-31 | 122 |
Msa0314590 | AT2G03980.4 | 28.882 | 322 | 185 | 9 | 22 | 308 | 32 | 344 | 1.59e-31 | 122 |
Msa0314590 | AT4G26790.1 | 31.928 | 332 | 180 | 15 | 29 | 322 | 25 | 348 | 3.03e-31 | 121 |
Msa0314590 | AT4G26790.2 | 31.928 | 332 | 180 | 15 | 29 | 322 | 25 | 348 | 3.03e-31 | 121 |
Msa0314590 | AT5G03810.1 | 28.205 | 351 | 208 | 14 | 5 | 318 | 1 | 344 | 9.83e-31 | 120 |
Msa0314590 | AT5G45960.1 | 28.743 | 334 | 195 | 12 | 27 | 321 | 41 | 370 | 1.51e-30 | 119 |
Msa0314590 | AT2G24560.1 | 29.326 | 341 | 199 | 11 | 7 | 311 | 8 | 342 | 4.46e-30 | 118 |
Msa0314590 | AT1G58430.1 | 29.360 | 344 | 194 | 14 | 7 | 311 | 10 | 343 | 4.84e-30 | 118 |
Msa0314590 | AT1G23500.1 | 29.738 | 343 | 192 | 13 | 13 | 320 | 10 | 338 | 4.84e-30 | 117 |
Msa0314590 | AT1G06990.1 | 27.964 | 329 | 192 | 10 | 29 | 320 | 33 | 353 | 7.12e-30 | 117 |
Msa0314590 | AT1G75930.1 | 27.515 | 338 | 201 | 11 | 10 | 315 | 6 | 331 | 8.45e-30 | 117 |
Msa0314590 | AT1G71120.1 | 28.367 | 349 | 199 | 13 | 29 | 341 | 27 | 360 | 2.20e-29 | 116 |
Msa0314590 | AT5G45950.1 | 27.027 | 333 | 208 | 11 | 13 | 317 | 21 | 346 | 2.62e-29 | 116 |
Msa0314590 | AT1G75900.1 | 28.902 | 346 | 199 | 11 | 10 | 318 | 20 | 355 | 4.52e-29 | 115 |
Msa0314590 | AT1G53920.1 | 28.399 | 331 | 193 | 11 | 31 | 325 | 46 | 368 | 1.21e-26 | 109 |
Msa0314590 | AT2G40250.1 | 26.852 | 324 | 193 | 10 | 31 | 316 | 34 | 351 | 1.55e-26 | 108 |
Msa0314590 | AT1G75920.2 | 27.859 | 341 | 206 | 12 | 10 | 320 | 6 | 336 | 2.69e-26 | 107 |
Msa0314590 | AT2G04020.2 | 29.032 | 310 | 182 | 11 | 22 | 320 | 32 | 314 | 7.80e-26 | 105 |
Msa0314590 | AT1G20120.1 | 26.829 | 328 | 202 | 10 | 26 | 320 | 71 | 393 | 9.84e-26 | 107 |
Msa0314590 | AT5G40990.1 | 27.882 | 373 | 218 | 13 | 7 | 338 | 10 | 372 | 4.01e-25 | 104 |
Msa0314590 | AT2G24560.2 | 34.234 | 222 | 135 | 7 | 7 | 222 | 8 | 224 | 1.91e-24 | 102 |
Msa0314590 | AT1G75910.1 | 28.923 | 325 | 188 | 12 | 32 | 324 | 27 | 340 | 4.46e-24 | 101 |
Msa0314590 | AT2G04020.1 | 33.498 | 203 | 121 | 6 | 22 | 219 | 32 | 225 | 3.77e-23 | 97.4 |
Msa0314590 | AT3G14225.2 | 27.123 | 365 | 211 | 14 | 15 | 338 | 22 | 372 | 8.00e-23 | 98.6 |
Msa0314590 | AT1G75920.1 | 26.404 | 356 | 207 | 13 | 10 | 320 | 1 | 346 | 1.47e-22 | 97.4 |
Msa0314590 | AT3G14225.1 | 26.975 | 367 | 213 | 14 | 15 | 338 | 22 | 376 | 1.96e-22 | 97.4 |
Msa0314590 | AT4G16220.1 | 48.305 | 118 | 55 | 4 | 1 | 116 | 1 | 114 | 2.66e-21 | 92.0 |
Msa0314590 | AT1G53990.1 | 27.083 | 384 | 212 | 15 | 4 | 341 | 5 | 366 | 2.78e-21 | 94.0 |
Msa0314590 | AT1G53940.2 | 27.273 | 374 | 207 | 14 | 13 | 338 | 18 | 374 | 1.90e-19 | 89.0 |
Msa0314590 | AT1G28570.1 | 27.520 | 367 | 189 | 16 | 9 | 315 | 8 | 357 | 5.48e-19 | 87.8 |
Msa0314590 | AT1G75920.4 | 26.531 | 294 | 176 | 12 | 57 | 320 | 25 | 308 | 1.35e-17 | 82.8 |
Msa0314590 | AT1G53940.1 | 31.034 | 232 | 131 | 9 | 13 | 230 | 18 | 234 | 4.05e-17 | 81.3 |
Msa0314590 | AT5G03610.1 | 26.216 | 370 | 205 | 16 | 1 | 321 | 1 | 351 | 5.45e-17 | 81.6 |
Msa0314590 | AT1G31550.1 | 31.841 | 201 | 111 | 9 | 34 | 221 | 37 | 224 | 7.82e-16 | 78.6 |
Msa0314590 | AT1G31550.2 | 31.841 | 201 | 111 | 9 | 34 | 221 | 37 | 224 | 8.33e-16 | 78.2 |
Msa0314590 | AT3G09930.2 | 26.032 | 315 | 174 | 16 | 34 | 308 | 40 | 335 | 1.79e-15 | 77.0 |
Msa0314590 | AT3G09930.1 | 26.032 | 315 | 174 | 16 | 34 | 308 | 40 | 335 | 1.79e-15 | 77.0 |
Msa0314590 | AT2G27360.1 | 27.507 | 349 | 176 | 16 | 29 | 315 | 24 | 357 | 6.20e-15 | 75.9 |
Msa0314590 | AT1G28580.1 | 25.843 | 356 | 173 | 16 | 26 | 315 | 30 | 360 | 1.02e-14 | 75.1 |
Msa0314590 | AT1G54020.2 | 25.474 | 369 | 213 | 18 | 3 | 337 | 7 | 347 | 2.03e-14 | 73.9 |
Msa0314590 | AT4G16233.1 | 35.537 | 121 | 66 | 5 | 230 | 341 | 15 | 132 | 4.32e-14 | 68.9 |
Msa0314590 | AT1G28600.1 | 24.868 | 378 | 201 | 18 | 29 | 344 | 22 | 378 | 7.89e-14 | 72.4 |
Msa0314590 | AT1G28610.1 | 30.052 | 193 | 108 | 10 | 1 | 179 | 4 | 183 | 3.55e-13 | 68.9 |
Msa0314590 | AT1G28600.2 | 30.247 | 162 | 89 | 8 | 29 | 173 | 22 | 176 | 1.51e-12 | 66.6 |
Msa0314590 | AT3G27950.1 | 23.483 | 379 | 209 | 12 | 3 | 322 | 2 | 358 | 2.01e-12 | 68.2 |
Msa0314590 | AT1G28660.1 | 28.079 | 203 | 117 | 9 | 34 | 221 | 36 | 224 | 6.89e-12 | 66.6 |
Msa0314590 | AT3G14220.1 | 24.138 | 348 | 209 | 12 | 25 | 337 | 24 | 351 | 9.67e-12 | 65.9 |
Msa0314590 | AT1G28670.1 | 26.295 | 251 | 152 | 12 | 1 | 233 | 5 | 240 | 9.68e-12 | 65.9 |
Msa0314590 | AT1G67830.1 | 25.000 | 344 | 202 | 13 | 26 | 318 | 23 | 361 | 1.22e-11 | 65.9 |
Msa0314590 | AT1G54000.1 | 22.193 | 374 | 237 | 14 | 3 | 342 | 7 | 360 | 1.51e-11 | 65.5 |
Msa0314590 | AT1G54010.1 | 23.907 | 343 | 206 | 15 | 31 | 337 | 32 | 355 | 1.59e-11 | 65.5 |
Msa0314590 | AT3G14210.1 | 24.638 | 345 | 197 | 13 | 33 | 337 | 36 | 357 | 5.85e-11 | 63.5 |
Msa0314590 | AT1G28640.1 | 26.271 | 236 | 143 | 11 | 1 | 221 | 5 | 224 | 6.83e-11 | 63.5 |
Msa0314590 | AT1G28660.2 | 28.713 | 202 | 116 | 9 | 34 | 221 | 36 | 223 | 7.93e-11 | 63.2 |
Find 83 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTATGTCTTCAACTTGTTCT+TGG | 0.206330 | 2_4:-10406187 | Msa0314590:five_prime_UTR |
TATGATTCATCTAATAATTC+AGG | 0.225334 | 2_4:-10404773 | Msa0314590:CDS |
AGAGTTATCTTTGAATTTAC+TGG | 0.229234 | 2_4:-10405345 | Msa0314590:intron |
TTGATTGCAGCTCAACTTCT+TGG | 0.235748 | 2_4:-10405791 | Msa0314590:intron |
TTAAATCAAATAAGTGTAAT+TGG | 0.258101 | 2_4:-10404568 | Msa0314590:three_prime_UTR |
GTGCCTTGTGTATTTATCTT+TGG | 0.270186 | 2_4:-10406027 | Msa0314590:CDS |
TATGACTTGTTGGGTAGAAT+TGG | 0.306114 | 2_4:+10405405 | None:intergenic |
TGCTTGTATTATGTGAATAT+TGG | 0.306140 | 2_4:-10405461 | Msa0314590:CDS |
AAATGTAATTACAATCCTTA+TGG | 0.317299 | 2_4:-10405955 | Msa0314590:CDS |
ATGACTTGTTGGGTAGAATT+GGG | 0.322325 | 2_4:+10405406 | None:intergenic |
TGTTGAACAAGAAATTGATA+TGG | 0.325815 | 2_4:-10404720 | Msa0314590:CDS |
ACAAGAAATTGATATGGAAT+TGG | 0.334843 | 2_4:-10404714 | Msa0314590:CDS |
CACAATCCATTCAACCTTGA+TGG | 0.349633 | 2_4:+10404896 | None:intergenic |
GGGCTATAAGTATGACTTGT+TGG | 0.353512 | 2_4:+10405395 | None:intergenic |
ATAGAAGTGACTATGCGTTT+TGG | 0.364837 | 2_4:-10404847 | Msa0314590:CDS |
AACTATGCATCTGGCGGAGC+TGG | 0.371338 | 2_4:-10405707 | Msa0314590:CDS |
GTCTTCAACTTGTTCTTGGT+TGG | 0.371662 | 2_4:-10406183 | Msa0314590:intron |
CGAGAAAATATGTGTTAGTT+GGG | 0.371873 | 2_4:-10405203 | Msa0314590:CDS |
TATGATAACTTTAGCAAAAG+AGG | 0.386164 | 2_4:-10404502 | Msa0314590:three_prime_UTR |
GCGAGAAAATATGTGTTAGT+TGG | 0.388425 | 2_4:-10405204 | Msa0314590:CDS |
CAGGGTTATGCTATTAGCTT+GGG | 0.390236 | 2_4:-10405572 | Msa0314590:CDS |
TCGACCGTTGGTAAATCTTC+CGG | 0.391397 | 2_4:+10405909 | None:intergenic |
GACTTTCCGATGGGACCAAC+CGG | 0.394422 | 2_4:-10405928 | Msa0314590:CDS |
TGTTGTCCATCAAGGTTGAA+TGG | 0.412513 | 2_4:-10404902 | Msa0314590:CDS |
GGAGACTCTTTATCTGATAG+TGG | 0.414420 | 2_4:-10406006 | Msa0314590:CDS |
AAAATATGTGTTAGTTGGGT+TGG | 0.414588 | 2_4:-10405199 | Msa0314590:CDS |
AGAGCTTCTGCATACTGCTC+AGG | 0.428284 | 2_4:+10405374 | None:intergenic |
AAATATGTGTTAGTTGGGTT+GGG | 0.439264 | 2_4:-10405198 | Msa0314590:CDS |
TTTGCAGACAAAAGAAGAAT+AGG | 0.444279 | 2_4:+10406084 | None:intergenic |
TAAAATTATTACCATCTGAC+AGG | 0.445247 | 2_4:+10405052 | None:intergenic |
CATAATACAAGCATTTGTTA+AGG | 0.448958 | 2_4:+10405471 | None:intergenic |
TTAGACTTTCTTCTTAGAGA+TGG | 0.451991 | 2_4:-10406136 | Msa0314590:exon |
TCTCAAATTGCTAGCAGACT+TGG | 0.466523 | 2_4:-10405518 | Msa0314590:CDS |
ACAGGGTTATGCTATTAGCT+TGG | 0.468271 | 2_4:-10405573 | Msa0314590:intron |
ATGCTCCTTGTTGTCCATCA+AGG | 0.468990 | 2_4:-10404910 | Msa0314590:CDS |
GGCTATAAGTATGACTTGTT+GGG | 0.471958 | 2_4:+10405396 | None:intergenic |
GAAAAGATTGTATCAAATGT+AGG | 0.477042 | 2_4:+10404620 | None:intergenic |
TGACTTGTTGGGTAGAATTG+GGG | 0.484356 | 2_4:+10405407 | None:intergenic |
ACAAGGTGCTTAATATCCAT+TGG | 0.485696 | 2_4:+10404740 | None:intergenic |
AGATAAATACACAAGGCACT+TGG | 0.485700 | 2_4:+10406031 | None:intergenic |
AAAGGTGTGAACTATGCATC+TGG | 0.495068 | 2_4:-10405716 | Msa0314590:CDS |
ATCGGAAAGTCGATTCCATA+AGG | 0.505437 | 2_4:+10405940 | None:intergenic |
ATGATTCATCTAATAATTCA+GGG | 0.511656 | 2_4:-10404772 | Msa0314590:CDS |
AGCTTGTAATTGAAAAGTGA+CGG | 0.519564 | 2_4:+10405159 | None:intergenic |
CAAATTGCTAGCAGACTTGG+AGG | 0.523023 | 2_4:-10405515 | Msa0314590:CDS |
GGTACCAAGCCTCGGTGGGA+TGG | 0.539300 | 2_4:+10404816 | None:intergenic |
TTCAGGGTTCACTTATCCAA+TGG | 0.539520 | 2_4:-10404756 | Msa0314590:CDS |
TTACAAGCTTAAATCTCTAG+TGG | 0.542536 | 2_4:-10405145 | Msa0314590:CDS |
GAGTCAGATGCCCTGTCAGA+TGG | 0.545719 | 2_4:-10405063 | Msa0314590:intron |
GTCAACTGCAGTTCGACCGT+TGG | 0.545979 | 2_4:+10405897 | None:intergenic |
CCACCATTTGCAAACATCAG+TGG | 0.549194 | 2_4:-10405752 | Msa0314590:CDS |
AATCTTCCGGTTGGTCCCAT+CGG | 0.551140 | 2_4:+10405922 | None:intergenic |
AATTCGAATGGAGACATACT+CGG | 0.551240 | 2_4:-10405684 | Msa0314590:CDS |
AAGTCCATCCCACCGAGGCT+TGG | 0.557254 | 2_4:-10404820 | Msa0314590:CDS |
CACAAATAGAATCAAACGTA+AGG | 0.557723 | 2_4:+10404537 | None:intergenic |
GATAAATACACAAGGCACTT+GGG | 0.558640 | 2_4:+10406032 | None:intergenic |
ACATTCTTGTTGCAATGAGA+AGG | 0.562394 | 2_4:+10404795 | None:intergenic |
AGAGGTGACTCACAGTTATG+TGG | 0.562551 | 2_4:-10404484 | Msa0314590:three_prime_UTR |
AATGGAGACATACTCGGCTA+AGG | 0.563484 | 2_4:-10405678 | Msa0314590:intron |
TTCTATAATCAAGACATGGT+TGG | 0.565519 | 2_4:-10406112 | Msa0314590:CDS |
GAACCACTGATGTTTGCAAA+TGG | 0.568931 | 2_4:+10405749 | None:intergenic |
TTCCAGGCTCTACATGACAT+TGG | 0.569074 | 2_4:-10405228 | Msa0314590:intron |
TATGGAATCGACTTTCCGAT+GGG | 0.572364 | 2_4:-10405937 | Msa0314590:CDS |
TGGCGGAGCTGGAATTCGAA+TGG | 0.584028 | 2_4:-10405696 | Msa0314590:CDS |
TTATGGAATCGACTTTCCGA+TGG | 0.587602 | 2_4:-10405938 | Msa0314590:CDS |
TAGTCACTTCTATTATAGCA+TGG | 0.591052 | 2_4:+10404857 | None:intergenic |
CCACTGATGTTTGCAAATGG+TGG | 0.591872 | 2_4:+10405752 | None:intergenic |
ACTTGAACGTGTTTAAGTAG+AGG | 0.594346 | 2_4:+10404670 | None:intergenic |
GAGCTTCTGCATACTGCTCA+GGG | 0.600756 | 2_4:+10405375 | None:intergenic |
AGAAGGTACCAAGCCTCGGT+GGG | 0.623013 | 2_4:+10404812 | None:intergenic |
AATGAGAAGGTACCAAGCCT+CGG | 0.626887 | 2_4:+10404808 | None:intergenic |
TTCAACCTTGATGGACAACA+AGG | 0.627150 | 2_4:+10404905 | None:intergenic |
TATCAATTTCTTGTTCAACA+AGG | 0.630157 | 2_4:+10404723 | None:intergenic |
GAGAAGGTACCAAGCCTCGG+TGG | 0.634613 | 2_4:+10404811 | None:intergenic |
CCGTTGGTAAATCTTCCGGT+TGG | 0.639272 | 2_4:+10405913 | None:intergenic |
AAATAGAATCAAACGTAAGG+TGG | 0.643932 | 2_4:+10404540 | None:intergenic |
AGTGGTTCAGACATACTCAA+AGG | 0.657804 | 2_4:-10405734 | Msa0314590:CDS |
AAAATTATTACCATCTGACA+GGG | 0.687534 | 2_4:+10405053 | None:intergenic |
GGTGTGAACTATGCATCTGG+CGG | 0.691974 | 2_4:-10405713 | Msa0314590:CDS |
TGGATTCTATAATCAAGACA+TGG | 0.712050 | 2_4:-10406116 | Msa0314590:CDS |
TCTCCAAAGATAAATACACA+AGG | 0.735148 | 2_4:+10406024 | None:intergenic |
GGATGAAGTCCATCCCACCG+AGG | 0.748304 | 2_4:-10404825 | Msa0314590:CDS |
CCAACCGGAAGATTTACCAA+CGG | 0.775116 | 2_4:-10405913 | Msa0314590:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTCAATATATATAATATGA+TGG | - | chr2_4:10405387-10405406 | Msa0314590:CDS | 10.0% |
!! | ATTCAATATATATAATATGA+TGG | - | chr2_4:10405387-10405406 | Msa0314590:CDS | 10.0% |
!! | TTAAATCAAATAAGTGTAAT+TGG | - | chr2_4:10406088-10406107 | Msa0314590:CDS | 15.0% |
!! | TTAAATCAAATAAGTGTAAT+TGG | - | chr2_4:10406088-10406107 | Msa0314590:CDS | 15.0% |
!! | ATGAATCCAGATAATAATTA+AGG | + | chr2_4:10404501-10404520 | None:intergenic | 20.0% |
!! | AAATGTAATTACAATCCTTA+TGG | - | chr2_4:10404701-10404720 | Msa0314590:CDS | 20.0% |
!! | AATAATATAGCCAAGTTAAA+AGG | + | chr2_4:10404799-10404818 | None:intergenic | 20.0% |
!! | TATGATTCATCTAATAATTC+AGG | - | chr2_4:10405883-10405902 | Msa0314590:intron | 20.0% |
!! | ATGATTCATCTAATAATTCA+GGG | - | chr2_4:10405884-10405903 | Msa0314590:intron | 20.0% |
!! | ATGAATCCAGATAATAATTA+AGG | + | chr2_4:10404501-10404520 | None:intergenic | 20.0% |
!! | AAATGTAATTACAATCCTTA+TGG | - | chr2_4:10404701-10404720 | Msa0314590:CDS | 20.0% |
!! | AATAATATAGCCAAGTTAAA+AGG | + | chr2_4:10404799-10404818 | None:intergenic | 20.0% |
!! | TATGATTCATCTAATAATTC+AGG | - | chr2_4:10405883-10405902 | Msa0314590:intron | 20.0% |
!! | ATGATTCATCTAATAATTCA+GGG | - | chr2_4:10405884-10405903 | Msa0314590:intron | 20.0% |
! | TTGGTTCCTTAATTATTATC+TGG | - | chr2_4:10404492-10404511 | Msa0314590:three_prime_UTR | 25.0% |
!! | ATTGTAATTACATTTTGCAG+AGG | + | chr2_4:10404696-10404715 | None:intergenic | 25.0% |
!!! | TAAGTAACATCCTTTTAACT+TGG | - | chr2_4:10404786-10404805 | Msa0314590:CDS | 25.0% |
!! | CATAATACAAGCATTTGTTA+AGG | + | chr2_4:10405188-10405207 | None:intergenic | 25.0% |
! | TGCTTGTATTATGTGAATAT+TGG | - | chr2_4:10405195-10405214 | Msa0314590:CDS | 25.0% |
! | AGAGTTATCTTTGAATTTAC+TGG | - | chr2_4:10405311-10405330 | Msa0314590:intron | 25.0% |
! | AAAATTATTACCATCTGACA+GGG | + | chr2_4:10405606-10405625 | None:intergenic | 25.0% |
! | TAAAATTATTACCATCTGAC+AGG | + | chr2_4:10405607-10405626 | None:intergenic | 25.0% |
! | TATCAATTTCTTGTTCAACA+AGG | + | chr2_4:10405936-10405955 | None:intergenic | 25.0% |
! | TGTTGAACAAGAAATTGATA+TGG | - | chr2_4:10405936-10405955 | Msa0314590:CDS | 25.0% |
! | ACAAGAAATTGATATGGAAT+TGG | - | chr2_4:10405942-10405961 | Msa0314590:CDS | 25.0% |
! | GAAAAGATTGTATCAAATGT+AGG | + | chr2_4:10406039-10406058 | None:intergenic | 25.0% |
! | TATGATAACTTTAGCAAAAG+AGG | - | chr2_4:10406154-10406173 | Msa0314590:intron | 25.0% |
! | TTGGTTCCTTAATTATTATC+TGG | - | chr2_4:10404492-10404511 | Msa0314590:three_prime_UTR | 25.0% |
!! | ATTGTAATTACATTTTGCAG+AGG | + | chr2_4:10404696-10404715 | None:intergenic | 25.0% |
!!! | TAAGTAACATCCTTTTAACT+TGG | - | chr2_4:10404786-10404805 | Msa0314590:CDS | 25.0% |
!! | CATAATACAAGCATTTGTTA+AGG | + | chr2_4:10405188-10405207 | None:intergenic | 25.0% |
! | TGCTTGTATTATGTGAATAT+TGG | - | chr2_4:10405195-10405214 | Msa0314590:CDS | 25.0% |
! | AGAGTTATCTTTGAATTTAC+TGG | - | chr2_4:10405311-10405330 | Msa0314590:intron | 25.0% |
! | AAAATTATTACCATCTGACA+GGG | + | chr2_4:10405606-10405625 | None:intergenic | 25.0% |
! | TAAAATTATTACCATCTGAC+AGG | + | chr2_4:10405607-10405626 | None:intergenic | 25.0% |
! | TATCAATTTCTTGTTCAACA+AGG | + | chr2_4:10405936-10405955 | None:intergenic | 25.0% |
! | TGTTGAACAAGAAATTGATA+TGG | - | chr2_4:10405936-10405955 | Msa0314590:CDS | 25.0% |
! | ACAAGAAATTGATATGGAAT+TGG | - | chr2_4:10405942-10405961 | Msa0314590:CDS | 25.0% |
! | GAAAAGATTGTATCAAATGT+AGG | + | chr2_4:10406039-10406058 | None:intergenic | 25.0% |
! | TATGATAACTTTAGCAAAAG+AGG | - | chr2_4:10406154-10406173 | Msa0314590:intron | 25.0% |
TTAGACTTTCTTCTTAGAGA+TGG | - | chr2_4:10404520-10404539 | Msa0314590:three_prime_UTR | 30.0% | |
TGGATTCTATAATCAAGACA+TGG | - | chr2_4:10404540-10404559 | Msa0314590:three_prime_UTR | 30.0% | |
TTCTATAATCAAGACATGGT+TGG | - | chr2_4:10404544-10404563 | Msa0314590:three_prime_UTR | 30.0% | |
TTTGCAGACAAAAGAAGAAT+AGG | + | chr2_4:10404575-10404594 | None:intergenic | 30.0% | |
TCTCCAAAGATAAATACACA+AGG | + | chr2_4:10404635-10404654 | None:intergenic | 30.0% | |
! | TAATTACATTTTGCAGAGGT+AGG | + | chr2_4:10404692-10404711 | None:intergenic | 30.0% |
!!! | CGGACATAATGTTATTTTTG+CGG | + | chr2_4:10405062-10405081 | None:intergenic | 30.0% |
AAATAACATTATGTCCGTAC+AGG | - | chr2_4:10405065-10405084 | Msa0314590:CDS | 30.0% | |
AATAACATTATGTCCGTACA+GGG | - | chr2_4:10405066-10405085 | Msa0314590:CDS | 30.0% | |
! | TAAAACACTGAGATTTTGAG+TGG | + | chr2_4:10405344-10405363 | None:intergenic | 30.0% |
CAATTAGTGAAAGAAAGCAA+GGG | + | chr2_4:10405367-10405386 | None:intergenic | 30.0% | |
TCAATTAGTGAAAGAAAGCA+AGG | + | chr2_4:10405368-10405387 | None:intergenic | 30.0% | |
TATTAGTTCCATTTGATTCC+AGG | - | chr2_4:10405412-10405431 | Msa0314590:CDS | 30.0% | |
CGAGAAAATATGTGTTAGTT+GGG | - | chr2_4:10405453-10405472 | Msa0314590:CDS | 30.0% | |
AAAATATGTGTTAGTTGGGT+TGG | - | chr2_4:10405457-10405476 | Msa0314590:CDS | 30.0% | |
AAATATGTGTTAGTTGGGTT+GGG | - | chr2_4:10405458-10405477 | Msa0314590:CDS | 30.0% | |
AGCTTGTAATTGAAAAGTGA+CGG | + | chr2_4:10405500-10405519 | None:intergenic | 30.0% | |
TTACAAGCTTAAATCTCTAG+TGG | - | chr2_4:10405511-10405530 | Msa0314590:CDS | 30.0% | |
TAGCTACAGTTTAATGTGAT+TGG | - | chr2_4:10405659-10405678 | Msa0314590:intron | 30.0% | |
!!! | TCAATGAATCTCAGGTTTTT+TGG | - | chr2_4:10405717-10405736 | Msa0314590:CDS | 30.0% |
TAGTCACTTCTATTATAGCA+TGG | + | chr2_4:10405802-10405821 | None:intergenic | 30.0% | |
AAATAGAATCAAACGTAAGG+TGG | + | chr2_4:10406119-10406138 | None:intergenic | 30.0% | |
CACAAATAGAATCAAACGTA+AGG | + | chr2_4:10406122-10406141 | None:intergenic | 30.0% | |
TTAGACTTTCTTCTTAGAGA+TGG | - | chr2_4:10404520-10404539 | Msa0314590:three_prime_UTR | 30.0% | |
TGGATTCTATAATCAAGACA+TGG | - | chr2_4:10404540-10404559 | Msa0314590:three_prime_UTR | 30.0% | |
TTCTATAATCAAGACATGGT+TGG | - | chr2_4:10404544-10404563 | Msa0314590:three_prime_UTR | 30.0% | |
TTTGCAGACAAAAGAAGAAT+AGG | + | chr2_4:10404575-10404594 | None:intergenic | 30.0% | |
TCTCCAAAGATAAATACACA+AGG | + | chr2_4:10404635-10404654 | None:intergenic | 30.0% | |
! | TAATTACATTTTGCAGAGGT+AGG | + | chr2_4:10404692-10404711 | None:intergenic | 30.0% |
!!! | CGGACATAATGTTATTTTTG+CGG | + | chr2_4:10405062-10405081 | None:intergenic | 30.0% |
AAATAACATTATGTCCGTAC+AGG | - | chr2_4:10405065-10405084 | Msa0314590:CDS | 30.0% | |
AATAACATTATGTCCGTACA+GGG | - | chr2_4:10405066-10405085 | Msa0314590:CDS | 30.0% | |
! | TAAAACACTGAGATTTTGAG+TGG | + | chr2_4:10405344-10405363 | None:intergenic | 30.0% |
CAATTAGTGAAAGAAAGCAA+GGG | + | chr2_4:10405367-10405386 | None:intergenic | 30.0% | |
TCAATTAGTGAAAGAAAGCA+AGG | + | chr2_4:10405368-10405387 | None:intergenic | 30.0% | |
TATTAGTTCCATTTGATTCC+AGG | - | chr2_4:10405412-10405431 | Msa0314590:CDS | 30.0% | |
CGAGAAAATATGTGTTAGTT+GGG | - | chr2_4:10405453-10405472 | Msa0314590:CDS | 30.0% | |
AAAATATGTGTTAGTTGGGT+TGG | - | chr2_4:10405457-10405476 | Msa0314590:CDS | 30.0% | |
AAATATGTGTTAGTTGGGTT+GGG | - | chr2_4:10405458-10405477 | Msa0314590:CDS | 30.0% | |
AGCTTGTAATTGAAAAGTGA+CGG | + | chr2_4:10405500-10405519 | None:intergenic | 30.0% | |
TTACAAGCTTAAATCTCTAG+TGG | - | chr2_4:10405511-10405530 | Msa0314590:CDS | 30.0% | |
TAGCTACAGTTTAATGTGAT+TGG | - | chr2_4:10405659-10405678 | Msa0314590:intron | 30.0% | |
!!! | TCAATGAATCTCAGGTTTTT+TGG | - | chr2_4:10405717-10405736 | Msa0314590:CDS | 30.0% |
TAGTCACTTCTATTATAGCA+TGG | + | chr2_4:10405802-10405821 | None:intergenic | 30.0% | |
AAATAGAATCAAACGTAAGG+TGG | + | chr2_4:10406119-10406138 | None:intergenic | 30.0% | |
CACAAATAGAATCAAACGTA+AGG | + | chr2_4:10406122-10406141 | None:intergenic | 30.0% | |
! | GATAAATACACAAGGCACTT+GGG | + | chr2_4:10404627-10404646 | None:intergenic | 35.0% |
! | AGATAAATACACAAGGCACT+TGG | + | chr2_4:10404628-10404647 | None:intergenic | 35.0% |
GTGCCTTGTGTATTTATCTT+TGG | - | chr2_4:10404629-10404648 | Msa0314590:three_prime_UTR | 35.0% | |
AATTCGAATGGAGACATACT+CGG | - | chr2_4:10404972-10404991 | Msa0314590:intron | 35.0% | |
!! | ATGACTTGTTGGGTAGAATT+GGG | + | chr2_4:10405253-10405272 | None:intergenic | 35.0% |
!! | TATGACTTGTTGGGTAGAAT+TGG | + | chr2_4:10405254-10405273 | None:intergenic | 35.0% |
!! | GGCTATAAGTATGACTTGTT+GGG | + | chr2_4:10405263-10405282 | None:intergenic | 35.0% |
GCGAGAAAATATGTGTTAGT+TGG | - | chr2_4:10405452-10405471 | Msa0314590:CDS | 35.0% | |
! | CAGTTTAATGTGATTGGTTG+AGG | - | chr2_4:10405665-10405684 | Msa0314590:intron | 35.0% |
! | TTATAGCATGGCTTTTCATC+AGG | + | chr2_4:10405790-10405809 | None:intergenic | 35.0% |
! | ATAGAAGTGACTATGCGTTT+TGG | - | chr2_4:10405809-10405828 | Msa0314590:intron | 35.0% |
! | TAGAAGTGACTATGCGTTTT+GGG | - | chr2_4:10405810-10405829 | Msa0314590:intron | 35.0% |
ACATTCTTGTTGCAATGAGA+AGG | + | chr2_4:10405864-10405883 | None:intergenic | 35.0% | |
! | ACAAGGTGCTTAATATCCAT+TGG | + | chr2_4:10405919-10405938 | None:intergenic | 35.0% |
ACTTGAACGTGTTTAAGTAG+AGG | + | chr2_4:10405989-10406008 | None:intergenic | 35.0% | |
! | GATAAATACACAAGGCACTT+GGG | + | chr2_4:10404627-10404646 | None:intergenic | 35.0% |
! | AGATAAATACACAAGGCACT+TGG | + | chr2_4:10404628-10404647 | None:intergenic | 35.0% |
GTGCCTTGTGTATTTATCTT+TGG | - | chr2_4:10404629-10404648 | Msa0314590:three_prime_UTR | 35.0% | |
AATTCGAATGGAGACATACT+CGG | - | chr2_4:10404972-10404991 | Msa0314590:intron | 35.0% | |
!! | ATGACTTGTTGGGTAGAATT+GGG | + | chr2_4:10405253-10405272 | None:intergenic | 35.0% |
!! | TATGACTTGTTGGGTAGAAT+TGG | + | chr2_4:10405254-10405273 | None:intergenic | 35.0% |
!! | GGCTATAAGTATGACTTGTT+GGG | + | chr2_4:10405263-10405282 | None:intergenic | 35.0% |
GCGAGAAAATATGTGTTAGT+TGG | - | chr2_4:10405452-10405471 | Msa0314590:CDS | 35.0% | |
! | CAGTTTAATGTGATTGGTTG+AGG | - | chr2_4:10405665-10405684 | Msa0314590:intron | 35.0% |
! | TTATAGCATGGCTTTTCATC+AGG | + | chr2_4:10405790-10405809 | None:intergenic | 35.0% |
! | ATAGAAGTGACTATGCGTTT+TGG | - | chr2_4:10405809-10405828 | Msa0314590:intron | 35.0% |
! | TAGAAGTGACTATGCGTTTT+GGG | - | chr2_4:10405810-10405829 | Msa0314590:intron | 35.0% |
ACATTCTTGTTGCAATGAGA+AGG | + | chr2_4:10405864-10405883 | None:intergenic | 35.0% | |
! | ACAAGGTGCTTAATATCCAT+TGG | + | chr2_4:10405919-10405938 | None:intergenic | 35.0% |
ACTTGAACGTGTTTAAGTAG+AGG | + | chr2_4:10405989-10406008 | None:intergenic | 35.0% | |
! | GTCTTCAACTTGTTCTTGGT+TGG | - | chr2_4:10404473-10404492 | Msa0314590:three_prime_UTR | 40.0% |
GGAGACTCTTTATCTGATAG+TGG | - | chr2_4:10404650-10404669 | Msa0314590:three_prime_UTR | 40.0% | |
! | TACATTTTGCAGAGGTAGGA+AGG | + | chr2_4:10404688-10404707 | None:intergenic | 40.0% |
! | ATCGGAAAGTCGATTCCATA+AGG | + | chr2_4:10404719-10404738 | None:intergenic | 40.0% |
! | TTATGGAATCGACTTTCCGA+TGG | - | chr2_4:10404718-10404737 | Msa0314590:CDS | 40.0% |
! | TATGGAATCGACTTTCCGAT+GGG | - | chr2_4:10404719-10404738 | Msa0314590:CDS | 40.0% |
GAAGTTGAGCTGCAATCAAA+AGG | + | chr2_4:10404864-10404883 | None:intergenic | 40.0% | |
TTGATTGCAGCTCAACTTCT+TGG | - | chr2_4:10404865-10404884 | Msa0314590:CDS | 40.0% | |
GAACCACTGATGTTTGCAAA+TGG | + | chr2_4:10404910-10404929 | None:intergenic | 40.0% | |
AGTGGTTCAGACATACTCAA+AGG | - | chr2_4:10404922-10404941 | Msa0314590:CDS | 40.0% | |
! | AAAGGTGTGAACTATGCATC+TGG | - | chr2_4:10404940-10404959 | Msa0314590:intron | 40.0% |
GCTAATAGCATAACCCTGTA+CGG | + | chr2_4:10405082-10405101 | None:intergenic | 40.0% | |
ACAGGGTTATGCTATTAGCT+TGG | - | chr2_4:10405083-10405102 | Msa0314590:CDS | 40.0% | |
! | CAGGGTTATGCTATTAGCTT+GGG | - | chr2_4:10405084-10405103 | Msa0314590:CDS | 40.0% |
TCTCAAATTGCTAGCAGACT+TGG | - | chr2_4:10405138-10405157 | Msa0314590:CDS | 40.0% | |
!! | TGACTTGTTGGGTAGAATTG+GGG | + | chr2_4:10405252-10405271 | None:intergenic | 40.0% |
! | GGGCTATAAGTATGACTTGT+TGG | + | chr2_4:10405264-10405283 | None:intergenic | 40.0% |
ATGTAGAGCCTGGAATCAAA+TGG | + | chr2_4:10405423-10405442 | None:intergenic | 40.0% | |
CTGCATGTTCAATGAATCTC+AGG | - | chr2_4:10405709-10405728 | Msa0314590:CDS | 40.0% | |
! | TTCAACCTTGATGGACAACA+AGG | + | chr2_4:10405754-10405773 | None:intergenic | 40.0% |
TGTTGTCCATCAAGGTTGAA+TGG | - | chr2_4:10405754-10405773 | Msa0314590:CDS | 40.0% | |
CACAATCCATTCAACCTTGA+TGG | + | chr2_4:10405763-10405782 | None:intergenic | 40.0% | |
TTCAGGGTTCACTTATCCAA+TGG | - | chr2_4:10405900-10405919 | Msa0314590:CDS | 40.0% | |
! | GTCTTCAACTTGTTCTTGGT+TGG | - | chr2_4:10404473-10404492 | Msa0314590:three_prime_UTR | 40.0% |
GGAGACTCTTTATCTGATAG+TGG | - | chr2_4:10404650-10404669 | Msa0314590:three_prime_UTR | 40.0% | |
! | TACATTTTGCAGAGGTAGGA+AGG | + | chr2_4:10404688-10404707 | None:intergenic | 40.0% |
! | ATCGGAAAGTCGATTCCATA+AGG | + | chr2_4:10404719-10404738 | None:intergenic | 40.0% |
! | TTATGGAATCGACTTTCCGA+TGG | - | chr2_4:10404718-10404737 | Msa0314590:CDS | 40.0% |
! | TATGGAATCGACTTTCCGAT+GGG | - | chr2_4:10404719-10404738 | Msa0314590:CDS | 40.0% |
GAAGTTGAGCTGCAATCAAA+AGG | + | chr2_4:10404864-10404883 | None:intergenic | 40.0% | |
TTGATTGCAGCTCAACTTCT+TGG | - | chr2_4:10404865-10404884 | Msa0314590:CDS | 40.0% | |
GAACCACTGATGTTTGCAAA+TGG | + | chr2_4:10404910-10404929 | None:intergenic | 40.0% | |
AGTGGTTCAGACATACTCAA+AGG | - | chr2_4:10404922-10404941 | Msa0314590:CDS | 40.0% | |
! | AAAGGTGTGAACTATGCATC+TGG | - | chr2_4:10404940-10404959 | Msa0314590:intron | 40.0% |
GCTAATAGCATAACCCTGTA+CGG | + | chr2_4:10405082-10405101 | None:intergenic | 40.0% | |
ACAGGGTTATGCTATTAGCT+TGG | - | chr2_4:10405083-10405102 | Msa0314590:CDS | 40.0% | |
! | CAGGGTTATGCTATTAGCTT+GGG | - | chr2_4:10405084-10405103 | Msa0314590:CDS | 40.0% |
TCTCAAATTGCTAGCAGACT+TGG | - | chr2_4:10405138-10405157 | Msa0314590:CDS | 40.0% | |
!! | TGACTTGTTGGGTAGAATTG+GGG | + | chr2_4:10405252-10405271 | None:intergenic | 40.0% |
! | GGGCTATAAGTATGACTTGT+TGG | + | chr2_4:10405264-10405283 | None:intergenic | 40.0% |
ATGTAGAGCCTGGAATCAAA+TGG | + | chr2_4:10405423-10405442 | None:intergenic | 40.0% | |
CTGCATGTTCAATGAATCTC+AGG | - | chr2_4:10405709-10405728 | Msa0314590:CDS | 40.0% | |
! | TTCAACCTTGATGGACAACA+AGG | + | chr2_4:10405754-10405773 | None:intergenic | 40.0% |
TGTTGTCCATCAAGGTTGAA+TGG | - | chr2_4:10405754-10405773 | Msa0314590:CDS | 40.0% | |
CACAATCCATTCAACCTTGA+TGG | + | chr2_4:10405763-10405782 | None:intergenic | 40.0% | |
TTCAGGGTTCACTTATCCAA+TGG | - | chr2_4:10405900-10405919 | Msa0314590:CDS | 40.0% | |
CCAACCGGAAGATTTACCAA+CGG | - | chr2_4:10404743-10404762 | Msa0314590:CDS | 45.0% | |
! | TCGACCGTTGGTAAATCTTC+CGG | + | chr2_4:10404750-10404769 | None:intergenic | 45.0% |
CCACTGATGTTTGCAAATGG+TGG | + | chr2_4:10404907-10404926 | None:intergenic | 45.0% | |
CCACCATTTGCAAACATCAG+TGG | - | chr2_4:10404904-10404923 | Msa0314590:CDS | 45.0% | |
AATGGAGACATACTCGGCTA+AGG | - | chr2_4:10404978-10404997 | Msa0314590:intron | 45.0% | |
CAAATTGCTAGCAGACTTGG+AGG | - | chr2_4:10405141-10405160 | Msa0314590:CDS | 45.0% | |
TTCCAGGCTCTACATGACAT+TGG | - | chr2_4:10405428-10405447 | Msa0314590:CDS | 45.0% | |
! | ATGCTCCTTGTTGTCCATCA+AGG | - | chr2_4:10405746-10405765 | Msa0314590:CDS | 45.0% |
!! | AATGAGAAGGTACCAAGCCT+CGG | + | chr2_4:10405851-10405870 | None:intergenic | 45.0% |
AGAGGTGACTCACAGTTATG+TGG | - | chr2_4:10406172-10406191 | Msa0314590:intron | 45.0% | |
CCAACCGGAAGATTTACCAA+CGG | - | chr2_4:10404743-10404762 | Msa0314590:CDS | 45.0% | |
! | TCGACCGTTGGTAAATCTTC+CGG | + | chr2_4:10404750-10404769 | None:intergenic | 45.0% |
CCACTGATGTTTGCAAATGG+TGG | + | chr2_4:10404907-10404926 | None:intergenic | 45.0% | |
CCACCATTTGCAAACATCAG+TGG | - | chr2_4:10404904-10404923 | Msa0314590:CDS | 45.0% | |
AATGGAGACATACTCGGCTA+AGG | - | chr2_4:10404978-10404997 | Msa0314590:intron | 45.0% | |
CAAATTGCTAGCAGACTTGG+AGG | - | chr2_4:10405141-10405160 | Msa0314590:CDS | 45.0% | |
TTCCAGGCTCTACATGACAT+TGG | - | chr2_4:10405428-10405447 | Msa0314590:CDS | 45.0% | |
! | ATGCTCCTTGTTGTCCATCA+AGG | - | chr2_4:10405746-10405765 | Msa0314590:CDS | 45.0% |
!! | AATGAGAAGGTACCAAGCCT+CGG | + | chr2_4:10405851-10405870 | None:intergenic | 45.0% |
AGAGGTGACTCACAGTTATG+TGG | - | chr2_4:10406172-10406191 | Msa0314590:intron | 45.0% | |
! | AATCTTCCGGTTGGTCCCAT+CGG | + | chr2_4:10404737-10404756 | None:intergenic | 50.0% |
! | CCGTTGGTAAATCTTCCGGT+TGG | + | chr2_4:10404746-10404765 | None:intergenic | 50.0% |
GGTGTGAACTATGCATCTGG+CGG | - | chr2_4:10404943-10404962 | Msa0314590:intron | 50.0% | |
GAGCTTCTGCATACTGCTCA+GGG | + | chr2_4:10405284-10405303 | None:intergenic | 50.0% | |
AGAGCTTCTGCATACTGCTC+AGG | + | chr2_4:10405285-10405304 | None:intergenic | 50.0% | |
CTCCAATGTCATGTAGAGCC+TGG | + | chr2_4:10405433-10405452 | None:intergenic | 50.0% | |
! | AATCTTCCGGTTGGTCCCAT+CGG | + | chr2_4:10404737-10404756 | None:intergenic | 50.0% |
! | CCGTTGGTAAATCTTCCGGT+TGG | + | chr2_4:10404746-10404765 | None:intergenic | 50.0% |
GGTGTGAACTATGCATCTGG+CGG | - | chr2_4:10404943-10404962 | Msa0314590:intron | 50.0% | |
GAGCTTCTGCATACTGCTCA+GGG | + | chr2_4:10405284-10405303 | None:intergenic | 50.0% | |
AGAGCTTCTGCATACTGCTC+AGG | + | chr2_4:10405285-10405304 | None:intergenic | 50.0% | |
CTCCAATGTCATGTAGAGCC+TGG | + | chr2_4:10405433-10405452 | None:intergenic | 50.0% | |
GACTTTCCGATGGGACCAAC+CGG | - | chr2_4:10404728-10404747 | Msa0314590:CDS | 55.0% | |
GTCAACTGCAGTTCGACCGT+TGG | + | chr2_4:10404762-10404781 | None:intergenic | 55.0% | |
AACTATGCATCTGGCGGAGC+TGG | - | chr2_4:10404949-10404968 | Msa0314590:intron | 55.0% | |
TGGCGGAGCTGGAATTCGAA+TGG | - | chr2_4:10404960-10404979 | Msa0314590:intron | 55.0% | |
GAGTCAGATGCCCTGTCAGA+TGG | - | chr2_4:10405593-10405612 | Msa0314590:intron | 55.0% | |
!! | AGAAGGTACCAAGCCTCGGT+GGG | + | chr2_4:10405847-10405866 | None:intergenic | 55.0% |
GACTTTCCGATGGGACCAAC+CGG | - | chr2_4:10404728-10404747 | Msa0314590:CDS | 55.0% | |
GTCAACTGCAGTTCGACCGT+TGG | + | chr2_4:10404762-10404781 | None:intergenic | 55.0% | |
AACTATGCATCTGGCGGAGC+TGG | - | chr2_4:10404949-10404968 | Msa0314590:intron | 55.0% | |
TGGCGGAGCTGGAATTCGAA+TGG | - | chr2_4:10404960-10404979 | Msa0314590:intron | 55.0% | |
GAGTCAGATGCCCTGTCAGA+TGG | - | chr2_4:10405593-10405612 | Msa0314590:intron | 55.0% | |
!! | AGAAGGTACCAAGCCTCGGT+GGG | + | chr2_4:10405847-10405866 | None:intergenic | 55.0% |
GGATGAAGTCCATCCCACCG+AGG | - | chr2_4:10405831-10405850 | Msa0314590:intron | 60.0% | |
AAGTCCATCCCACCGAGGCT+TGG | - | chr2_4:10405836-10405855 | Msa0314590:intron | 60.0% | |
!! | GAGAAGGTACCAAGCCTCGG+TGG | + | chr2_4:10405848-10405867 | None:intergenic | 60.0% |
GGATGAAGTCCATCCCACCG+AGG | - | chr2_4:10405831-10405850 | Msa0314590:intron | 60.0% | |
AAGTCCATCCCACCGAGGCT+TGG | - | chr2_4:10405836-10405855 | Msa0314590:intron | 60.0% | |
!! | GAGAAGGTACCAAGCCTCGG+TGG | + | chr2_4:10405848-10405867 | None:intergenic | 60.0% |
GGTACCAAGCCTCGGTGGGA+TGG | + | chr2_4:10405843-10405862 | None:intergenic | 65.0% | |
GGTACCAAGCCTCGGTGGGA+TGG | + | chr2_4:10405843-10405862 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 10404470 | 10406208 | 10404470 | ID=Msa0314590;Name=Msa0314590 |
chr2_4 | mRNA | 10404470 | 10406208 | 10404470 | ID=Msa0314590-mRNA-1;Parent=Msa0314590;Name=Msa0314590-mRNA-1;_AED=0.22;_eAED=0.22;_QI=49|1|1|1|0.8|0.66|6|230|349 |
chr2_4 | exon | 10404470 | 10404947 | 10404470 | ID=Msa0314590-mRNA-1:exon:4020;Parent=Msa0314590-mRNA-1 |
chr2_4 | exon | 10405064 | 10405244 | 10405064 | ID=Msa0314590-mRNA-1:exon:4019;Parent=Msa0314590-mRNA-1 |
chr2_4 | exon | 10405346 | 10405591 | 10405346 | ID=Msa0314590-mRNA-1:exon:4018;Parent=Msa0314590-mRNA-1 |
chr2_4 | exon | 10405679 | 10405803 | 10405679 | ID=Msa0314590-mRNA-1:exon:4017;Parent=Msa0314590-mRNA-1 |
chr2_4 | exon | 10405890 | 10406163 | 10405890 | ID=Msa0314590-mRNA-1:exon:4016;Parent=Msa0314590-mRNA-1 |
chr2_4 | exon | 10406184 | 10406208 | 10406184 | ID=Msa0314590-mRNA-1:exon:4015;Parent=Msa0314590-mRNA-1 |
chr2_4 | five_prime_UTR | 10406184 | 10406208 | 10406184 | ID=Msa0314590-mRNA-1:five_prime_utr;Parent=Msa0314590-mRNA-1 |
chr2_4 | five_prime_UTR | 10406140 | 10406163 | 10406140 | ID=Msa0314590-mRNA-1:five_prime_utr;Parent=Msa0314590-mRNA-1 |
chr2_4 | CDS | 10405890 | 10406139 | 10405890 | ID=Msa0314590-mRNA-1:cds;Parent=Msa0314590-mRNA-1 |
chr2_4 | CDS | 10405679 | 10405803 | 10405679 | ID=Msa0314590-mRNA-1:cds;Parent=Msa0314590-mRNA-1 |
chr2_4 | CDS | 10405346 | 10405591 | 10405346 | ID=Msa0314590-mRNA-1:cds;Parent=Msa0314590-mRNA-1 |
chr2_4 | CDS | 10405064 | 10405244 | 10405064 | ID=Msa0314590-mRNA-1:cds;Parent=Msa0314590-mRNA-1 |
chr2_4 | CDS | 10404700 | 10404947 | 10404700 | ID=Msa0314590-mRNA-1:cds;Parent=Msa0314590-mRNA-1 |
chr2_4 | three_prime_UTR | 10404470 | 10404699 | 10404470 | ID=Msa0314590-mRNA-1:three_prime_utr;Parent=Msa0314590-mRNA-1 |
Gene Sequence |
Protein sequence |