Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274040 | KEH36666.1 | 93.696 | 349 | 22 | 0 | 1 | 349 | 1 | 349 | 0.0 | 682 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274040 | sp|Q9C7N4|GDL15_ARATH | 44.262 | 366 | 172 | 8 | 1 | 338 | 1 | 362 | 1.99e-100 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274040 | A0A072V4S0 | 93.696 | 349 | 22 | 0 | 1 | 349 | 1 | 349 | 0.0 | 682 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015930 | Msa0274040 | -0.805630 | 1.216402e-49 | -8.615850e-47 |
| Msa0020390 | Msa0274040 | -0.861180 | 1.229759e-63 | -8.615850e-47 |
| Msa0038870 | Msa0274040 | -0.812172 | 4.845696e-51 | -8.615850e-47 |
| Msa0044000 | Msa0274040 | -0.820926 | 5.297498e-53 | -8.615850e-47 |
| Msa0115190 | Msa0274040 | -0.831805 | 1.355770e-55 | -8.615850e-47 |
| Msa0118540 | Msa0274040 | -0.829101 | 6.215919e-55 | -8.615850e-47 |
| Msa0127800 | Msa0274040 | -0.813654 | 2.294160e-51 | -8.615850e-47 |
| Msa0149440 | Msa0274040 | -0.801710 | 7.919477e-49 | -8.615850e-47 |
| Msa0159420 | Msa0274040 | -0.813287 | 2.763086e-51 | -8.615850e-47 |
| Msa0162130 | Msa0274040 | -0.833342 | 5.635351e-56 | -8.615850e-47 |
| Msa0167980 | Msa0274040 | -0.813042 | 3.126171e-51 | -8.615850e-47 |
| Msa0183850 | Msa0274040 | -0.821288 | 4.372284e-53 | -8.615850e-47 |
| Msa0189520 | Msa0274040 | -0.821095 | 4.845059e-53 | -8.615850e-47 |
| Msa0191070 | Msa0274040 | -0.822791 | 1.961175e-53 | -8.615850e-47 |
| Msa0194350 | Msa0274040 | 0.815578 | 8.605722e-52 | -8.615850e-47 |
| Msa0204960 | Msa0274040 | -0.828113 | 1.076725e-54 | -8.615850e-47 |
| Msa0233370 | Msa0274040 | -0.839616 | 1.424678e-57 | -8.615850e-47 |
| Msa0236190 | Msa0274040 | 0.875446 | 3.061933e-68 | -8.615850e-47 |
| Msa0257490 | Msa0274040 | -0.830239 | 3.284576e-55 | -8.615850e-47 |
| Msa0271360 | Msa0274040 | -0.802694 | 4.968301e-49 | -8.615850e-47 |
| Msa0272300 | Msa0274040 | -0.802875 | 4.558751e-49 | -8.615850e-47 |
| Msa0274040 | Msa0275360 | -0.814713 | 1.338977e-51 | -8.615850e-47 |
| Msa0274040 | Msa0281530 | -0.839215 | 1.810188e-57 | -8.615850e-47 |
| Msa0274040 | Msa0296790 | -0.808944 | 2.414320e-50 | -8.615850e-47 |
| Msa0274040 | Msa0309880 | -0.800822 | 1.203206e-48 | -8.615850e-47 |
| Msa0274040 | Msa0311720 | -0.819758 | 9.816979e-53 | -8.615850e-47 |
| Msa0274040 | Msa0314590 | 0.831315 | 1.790096e-55 | -8.615850e-47 |
| Msa0274040 | Msa0320590 | -0.801503 | 8.730812e-49 | -8.615850e-47 |
| Msa0274040 | Msa0385500 | -0.824692 | 7.031593e-54 | -8.615850e-47 |
| Msa0274040 | Msa0387820 | -0.883432 | 4.508789e-71 | -8.615850e-47 |
| Msa0274040 | Msa0388730 | -0.803227 | 3.854124e-49 | -8.615850e-47 |
| Msa0274040 | Msa0403770 | -0.801202 | 1.006224e-48 | -8.615850e-47 |
| Msa0274040 | Msa0496450 | -0.805413 | 1.351093e-49 | -8.615850e-47 |
| Msa0274040 | Msa0510840 | -0.810107 | 1.358842e-50 | -8.615850e-47 |
| Msa0274040 | Msa0512340 | -0.843505 | 1.344694e-58 | -8.615850e-47 |
| Msa0274040 | Msa0527740 | -0.805289 | 1.434239e-49 | -8.615850e-47 |
| Msa0274040 | Msa0531530 | -0.830334 | 3.114608e-55 | -8.615850e-47 |
| Msa0274040 | Msa0534900 | -0.809965 | 1.457848e-50 | -8.615850e-47 |
| Msa0274040 | Msa0542290 | -0.841915 | 3.556048e-58 | -8.615850e-47 |
| Msa0274040 | Msa0542560 | -0.839570 | 1.463880e-57 | -8.615850e-47 |
| Msa0274040 | Msa0547160 | -0.805448 | 1.328511e-49 | -8.615850e-47 |
| Msa0274040 | Msa0588260 | -0.865369 | 6.207706e-65 | -8.615850e-47 |
| Msa0274040 | Msa0604290 | -0.853952 | 1.700085e-61 | -8.615850e-47 |
| Msa0274040 | Msa0605650 | -0.804740 | 1.868359e-49 | -8.615850e-47 |
| Msa0274040 | Msa0631350 | -0.801174 | 1.019564e-48 | -8.615850e-47 |
| Msa0274040 | Msa0645530 | -0.804131 | 2.503349e-49 | -8.615850e-47 |
| Msa0274040 | Msa0672550 | -0.830909 | 2.251572e-55 | -8.615850e-47 |
| Msa0274040 | Msa0682680 | -0.808564 | 2.911384e-50 | -8.615850e-47 |
| Msa0274040 | Msa0685090 | -0.814765 | 1.303856e-51 | -8.615850e-47 |
| Msa0274040 | Msa0689440 | -0.805589 | 1.241018e-49 | -8.615850e-47 |
| Msa0274040 | Msa0737600 | -0.807576 | 4.724121e-50 | -8.615850e-47 |
| Msa0274040 | Msa0746170 | -0.800022 | 1.751203e-48 | -8.615850e-47 |
| Msa0274040 | Msa0746210 | -0.805493 | 1.299743e-49 | -8.615850e-47 |
| Msa0274040 | Msa0800370 | -0.828463 | 8.864899e-55 | -8.615850e-47 |
| Msa0274040 | Msa0816730 | -0.803841 | 2.875700e-49 | -8.615850e-47 |
| Msa0274040 | Msa0818750 | -0.803240 | 3.831315e-49 | -8.615850e-47 |
| Msa0274040 | Msa0880730 | -0.806827 | 6.808530e-50 | -8.615850e-47 |
| Msa0274040 | Msa0887250 | -0.813312 | 2.727406e-51 | -8.615850e-47 |
| Msa0274040 | Msa0933380 | -0.816536 | 5.258082e-52 | -8.615850e-47 |
| Msa0274040 | Msa0958000 | -0.806663 | 7.372960e-50 | -8.615850e-47 |
| Msa0274040 | Msa0971160 | -0.801923 | 7.161344e-49 | -8.615850e-47 |
| Msa0274040 | Msa0974950 | -0.807403 | 5.142785e-50 | -8.615850e-47 |
| Msa0274040 | Msa0987370 | -0.807612 | 4.643379e-50 | -8.615850e-47 |
| Msa0274040 | Msa0994370 | -0.826812 | 2.208630e-54 | -8.615850e-47 |
| Msa0274040 | Msa1006710 | -0.834559 | 2.794029e-56 | -8.615850e-47 |
| Msa0274040 | Msa1023180 | -0.821424 | 4.067447e-53 | -8.615850e-47 |
| Msa0274040 | Msa1024710 | -0.830461 | 2.899382e-55 | -8.615850e-47 |
| Msa0274040 | Msa1029050 | -0.832272 | 1.039243e-55 | -8.615850e-47 |
| Msa0274040 | Msa1043050 | -0.820235 | 7.634201e-53 | -8.615850e-47 |
| Msa0274040 | Msa1081790 | 0.814297 | 1.655371e-51 | -8.615850e-47 |
| Msa0274040 | Msa1128270 | -0.817648 | 2.956719e-52 | -8.615850e-47 |
| Msa0274040 | Msa1128280 | -0.817299 | 3.543223e-52 | -8.615850e-47 |
| Msa0274040 | Msa1140230 | -0.805466 | 1.317117e-49 | -8.615850e-47 |
| Msa0274040 | Msa1150710 | -0.821991 | 3.007858e-53 | -8.615850e-47 |
| Msa0274040 | Msa1158640 | 0.816448 | 5.501546e-52 | -8.615850e-47 |
| Msa0274040 | Msa1165270 | -0.805617 | 1.224513e-49 | -8.615850e-47 |
| Msa0274040 | Msa1165780 | -0.811590 | 6.487341e-51 | -8.615850e-47 |
| Msa0274040 | Msa1166090 | 0.810032 | 1.409863e-50 | -8.615850e-47 |
| Msa0274040 | Msa1206270 | -0.844942 | 5.530378e-59 | -8.615850e-47 |
| Msa0274040 | Msa1206290 | -0.825572 | 4.357897e-54 | -8.615850e-47 |
| Msa0274040 | Msa1218500 | -0.812521 | 4.066051e-51 | -8.615850e-47 |
| Msa0274040 | Msa1231840 | -0.824564 | 7.539001e-54 | -8.615850e-47 |
| Msa0274040 | Msa1254730 | -0.834197 | 3.445871e-56 | -8.615850e-47 |
| Msa0274040 | Msa1256810 | -0.823360 | 1.444553e-53 | -8.615850e-47 |
| Msa0274040 | Msa1274560 | -0.815672 | 8.198753e-52 | -8.615850e-47 |
| Msa0274040 | Msa1280340 | -0.817144 | 3.839663e-52 | -8.615850e-47 |
| Msa0274040 | Msa1294820 | -0.809954 | 1.465692e-50 | -8.615850e-47 |
| Msa0274040 | Msa1298010 | -0.800726 | 1.259055e-48 | -8.615850e-47 |
| Msa0274040 | Msa1316360 | -0.804564 | 2.033582e-49 | -8.615850e-47 |
| Msa0274040 | Msa1336560 | -0.830422 | 2.963828e-55 | -8.615850e-47 |
| Msa0274040 | Msa1351540 | -0.816385 | 5.682264e-52 | -8.615850e-47 |
| Msa0274040 | Msa1396400 | 0.811025 | 8.605791e-51 | -8.615850e-47 |
| Msa0274040 | Msa1434420 | 0.844597 | 6.851324e-59 | -8.615850e-47 |
| Msa0274040 | Msa1448620 | -0.811856 | 5.677937e-51 | -8.615850e-47 |
| Msa0274040 | Msa1448630 | -0.808612 | 2.843670e-50 | -8.615850e-47 |
| Msa0274040 | Msa1454680 | -0.822922 | 1.828129e-53 | -8.615850e-47 |
| Msa0274040 | Msa1458090 | -0.813555 | 2.412314e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274040 | MtrunA17_Chr2g0284941 | 93.696 | 349 | 22 | 0 | 1 | 349 | 1 | 349 | 0.0 | 682 |
| Msa0274040 | MtrunA17_Chr2g0285001 | 76.819 | 371 | 64 | 3 | 1 | 349 | 1 | 371 | 0.0 | 567 |
| Msa0274040 | MtrunA17_Chr2g0284951 | 77.297 | 370 | 58 | 4 | 1 | 349 | 1 | 365 | 0.0 | 566 |
| Msa0274040 | MtrunA17_Chr2g0284991 | 74.114 | 367 | 74 | 2 | 1 | 346 | 1 | 367 | 0.0 | 559 |
| Msa0274040 | MtrunA17_Chr2g0284921 | 58.146 | 356 | 125 | 5 | 6 | 338 | 6 | 360 | 1.38e-133 | 385 |
| Msa0274040 | MtrunA17_Chr3g0085881 | 55.493 | 355 | 138 | 4 | 1 | 338 | 1 | 352 | 1.68e-127 | 369 |
| Msa0274040 | MtrunA17_Chr8g0380031 | 55.432 | 359 | 130 | 7 | 1 | 338 | 56 | 405 | 1.13e-124 | 364 |
| Msa0274040 | MtrunA17_Chr8g0380041 | 44.687 | 367 | 167 | 9 | 1 | 338 | 3 | 362 | 4.26e-99 | 297 |
| Msa0274040 | MtrunA17_Chr3g0086641 | 44.898 | 343 | 157 | 7 | 25 | 338 | 30 | 369 | 2.09e-94 | 285 |
| Msa0274040 | MtrunA17_Chr2g0285061 | 44.248 | 339 | 158 | 7 | 29 | 338 | 28 | 364 | 9.99e-93 | 281 |
| Msa0274040 | MtrunA17_Chr3g0077581 | 41.828 | 361 | 175 | 7 | 8 | 337 | 12 | 368 | 5.45e-86 | 264 |
| Msa0274040 | MtrunA17_Chr3g0077571 | 39.227 | 362 | 186 | 9 | 4 | 338 | 2 | 356 | 1.11e-75 | 237 |
| Msa0274040 | MtrunA17_Chr3g0131321 | 39.359 | 343 | 169 | 10 | 33 | 341 | 34 | 371 | 1.89e-69 | 222 |
| Msa0274040 | MtrunA17_Chr4g0017431 | 35.519 | 366 | 197 | 11 | 5 | 338 | 4 | 362 | 4.50e-61 | 199 |
| Msa0274040 | MtrunA17_Chr2g0284931 | 48.148 | 216 | 108 | 3 | 126 | 338 | 5 | 219 | 1.80e-57 | 186 |
| Msa0274040 | MtrunA17_Chr7g0275021 | 34.503 | 342 | 190 | 9 | 26 | 337 | 27 | 364 | 3.28e-53 | 179 |
| Msa0274040 | MtrunA17_Chr4g0068441 | 35.735 | 347 | 184 | 12 | 25 | 338 | 27 | 367 | 3.22e-52 | 177 |
| Msa0274040 | MtrunA17_Chr5g0434621 | 36.478 | 318 | 168 | 10 | 34 | 321 | 26 | 339 | 4.99e-52 | 176 |
| Msa0274040 | MtrunA17_Chr2g0294311 | 34.324 | 370 | 196 | 11 | 9 | 338 | 10 | 372 | 5.54e-51 | 174 |
| Msa0274040 | MtrunA17_Chr7g0275011 | 31.421 | 366 | 212 | 9 | 4 | 337 | 6 | 364 | 3.33e-50 | 171 |
| Msa0274040 | MtrunA17_Chr1g0189901 | 32.738 | 336 | 192 | 10 | 35 | 340 | 33 | 364 | 8.54e-50 | 170 |
| Msa0274040 | MtrunA17_Chr2g0294301 | 35.671 | 328 | 174 | 11 | 30 | 324 | 32 | 355 | 2.04e-48 | 167 |
| Msa0274040 | MtrunA17_Chr2g0285041 | 65.546 | 119 | 40 | 1 | 86 | 203 | 1 | 119 | 6.86e-48 | 158 |
| Msa0274040 | MtrunA17_Chr1g0189931 | 32.143 | 336 | 194 | 9 | 35 | 340 | 34 | 365 | 6.93e-48 | 165 |
| Msa0274040 | MtrunA17_Chr1g0182811 | 29.947 | 374 | 222 | 10 | 1 | 340 | 1 | 368 | 7.20e-48 | 165 |
| Msa0274040 | MtrunA17_Chr7g0275001 | 31.871 | 342 | 194 | 9 | 29 | 337 | 21 | 356 | 1.26e-46 | 162 |
| Msa0274040 | MtrunA17_Chr8g0374101 | 31.148 | 366 | 210 | 12 | 9 | 336 | 12 | 373 | 7.76e-45 | 157 |
| Msa0274040 | MtrunA17_Chr3g0085231 | 34.174 | 357 | 203 | 12 | 4 | 338 | 3 | 349 | 3.82e-44 | 155 |
| Msa0274040 | MtrunA17_Chr7g0274991 | 31.638 | 354 | 203 | 9 | 20 | 337 | 13 | 363 | 6.49e-44 | 155 |
| Msa0274040 | MtrunA17_Chr3g0099231 | 30.890 | 382 | 212 | 15 | 1 | 345 | 1 | 367 | 8.04e-43 | 152 |
| Msa0274040 | MtrunA17_Chr4g0060811 | 35.625 | 320 | 162 | 11 | 35 | 318 | 29 | 340 | 8.10e-43 | 152 |
| Msa0274040 | MtrunA17_Chr1g0189891 | 32.647 | 340 | 192 | 9 | 35 | 345 | 31 | 362 | 1.66e-42 | 151 |
| Msa0274040 | MtrunA17_Chr4g0008851 | 31.214 | 346 | 186 | 10 | 35 | 340 | 34 | 367 | 4.75e-42 | 150 |
| Msa0274040 | MtrunA17_Chr1g0156911 | 31.250 | 320 | 183 | 9 | 29 | 316 | 33 | 347 | 4.97e-42 | 149 |
| Msa0274040 | MtrunA17_Chr5g0444401 | 31.778 | 343 | 190 | 13 | 31 | 337 | 26 | 360 | 6.02e-42 | 149 |
| Msa0274040 | MtrunA17_Chr3g0092131 | 36.232 | 345 | 180 | 14 | 5 | 318 | 1 | 336 | 6.90e-42 | 149 |
| Msa0274040 | MtrunA17_Chr6g0457921 | 31.858 | 339 | 195 | 9 | 31 | 337 | 26 | 360 | 1.88e-41 | 148 |
| Msa0274040 | MtrunA17_Chr3g0099151 | 33.333 | 348 | 181 | 16 | 30 | 337 | 84 | 420 | 9.83e-41 | 147 |
| Msa0274040 | MtrunA17_Chr2g0320671 | 33.333 | 345 | 188 | 14 | 5 | 315 | 4 | 340 | 3.28e-40 | 145 |
| Msa0274040 | MtrunA17_Chr5g0396511 | 31.361 | 338 | 195 | 12 | 35 | 340 | 48 | 380 | 5.60e-40 | 145 |
| Msa0274040 | MtrunA17_Chr1g0156921 | 31.085 | 341 | 191 | 13 | 9 | 311 | 14 | 348 | 2.13e-38 | 140 |
| Msa0274040 | MtrunA17_Chr3g0099161 | 33.523 | 352 | 174 | 15 | 30 | 337 | 89 | 424 | 3.83e-38 | 140 |
| Msa0274040 | MtrunA17_Chr1g0156891 | 33.229 | 319 | 165 | 12 | 31 | 311 | 41 | 349 | 4.95e-38 | 139 |
| Msa0274040 | MtrunA17_Chr7g0215961 | 29.032 | 341 | 195 | 10 | 27 | 337 | 27 | 350 | 7.46e-38 | 139 |
| Msa0274040 | MtrunA17_Chr5g0420811 | 30.650 | 323 | 177 | 12 | 29 | 319 | 29 | 336 | 1.18e-37 | 138 |
| Msa0274040 | MtrunA17_Chr5g0405831 | 31.915 | 329 | 175 | 11 | 31 | 320 | 41 | 359 | 3.85e-37 | 137 |
| Msa0274040 | MtrunA17_Chr1g0156901 | 29.630 | 351 | 193 | 14 | 3 | 311 | 17 | 355 | 4.15e-37 | 137 |
| Msa0274040 | MtrunA17_Chr5g0405821 | 32.923 | 325 | 178 | 11 | 31 | 320 | 41 | 360 | 6.72e-37 | 136 |
| Msa0274040 | MtrunA17_Chr3g0105401 | 30.029 | 343 | 200 | 11 | 8 | 318 | 8 | 342 | 9.32e-37 | 135 |
| Msa0274040 | MtrunA17_Chr5g0438621 | 29.683 | 347 | 197 | 13 | 4 | 315 | 6 | 340 | 1.01e-36 | 135 |
| Msa0274040 | MtrunA17_Chr2g0284981 | 73.418 | 79 | 21 | 0 | 268 | 346 | 9 | 87 | 2.19e-36 | 127 |
| Msa0274040 | MtrunA17_Chr8g0371491 | 30.347 | 346 | 197 | 11 | 11 | 320 | 14 | 351 | 2.23e-36 | 134 |
| Msa0274040 | MtrunA17_Chr2g0330781 | 31.579 | 323 | 180 | 10 | 31 | 318 | 29 | 345 | 2.46e-36 | 134 |
| Msa0274040 | MtrunA17_Chr8g0341001 | 29.912 | 341 | 200 | 12 | 13 | 318 | 10 | 346 | 4.48e-36 | 134 |
| Msa0274040 | MtrunA17_Chr4g0027521 | 31.875 | 320 | 179 | 10 | 25 | 309 | 19 | 334 | 1.24e-35 | 132 |
| Msa0274040 | MtrunA17_Chr5g0432101 | 30.368 | 326 | 187 | 11 | 28 | 318 | 28 | 348 | 1.03e-34 | 130 |
| Msa0274040 | MtrunA17_Chr1g0156931 | 30.671 | 313 | 179 | 10 | 31 | 311 | 39 | 345 | 1.07e-34 | 130 |
| Msa0274040 | MtrunA17_Chr8g0370951 | 28.889 | 360 | 210 | 13 | 4 | 323 | 1 | 354 | 2.65e-34 | 129 |
| Msa0274040 | MtrunA17_Chr3g0142941 | 29.653 | 317 | 178 | 9 | 31 | 311 | 45 | 352 | 7.95e-34 | 128 |
| Msa0274040 | MtrunA17_Chr5g0438631 | 29.032 | 341 | 200 | 10 | 1 | 308 | 1 | 332 | 1.25e-33 | 127 |
| Msa0274040 | MtrunA17_Chr4g0046151 | 27.586 | 348 | 204 | 12 | 13 | 317 | 15 | 357 | 1.32e-33 | 127 |
| Msa0274040 | MtrunA17_Chr2g0301641 | 30.398 | 352 | 189 | 14 | 34 | 343 | 44 | 381 | 3.54e-33 | 127 |
| Msa0274040 | MtrunA17_Chr3g0142921 | 30.696 | 316 | 175 | 11 | 32 | 311 | 35 | 342 | 4.72e-33 | 125 |
| Msa0274040 | MtrunA17_Chr3g0120861 | 30.312 | 320 | 185 | 11 | 29 | 315 | 34 | 348 | 5.87e-33 | 125 |
| Msa0274040 | MtrunA17_Chr5g0438641 | 31.230 | 317 | 172 | 15 | 29 | 308 | 28 | 335 | 4.58e-32 | 123 |
| Msa0274040 | MtrunA17_Chr8g0349321 | 29.834 | 362 | 203 | 14 | 14 | 339 | 19 | 365 | 3.99e-31 | 120 |
| Msa0274040 | MtrunA17_Chr1g0157001 | 30.383 | 339 | 189 | 13 | 38 | 336 | 41 | 372 | 4.63e-31 | 120 |
| Msa0274040 | MtrunA17_Chr8g0349341 | 30.663 | 362 | 200 | 15 | 14 | 339 | 19 | 365 | 8.90e-31 | 120 |
| Msa0274040 | MtrunA17_Chr8g0371471 | 30.218 | 321 | 188 | 12 | 32 | 320 | 40 | 356 | 1.18e-30 | 119 |
| Msa0274040 | MtrunA17_Chr5g0437421 | 28.972 | 321 | 185 | 9 | 29 | 311 | 28 | 343 | 1.55e-30 | 119 |
| Msa0274040 | MtrunA17_Chr7g0229591 | 35.385 | 195 | 119 | 5 | 10 | 201 | 7 | 197 | 3.74e-29 | 112 |
| Msa0274040 | MtrunA17_Chr8g0371481 | 29.321 | 324 | 192 | 12 | 32 | 322 | 40 | 359 | 7.58e-29 | 114 |
| Msa0274040 | MtrunA17_Chr2g0283191 | 28.000 | 325 | 187 | 10 | 29 | 311 | 34 | 353 | 2.21e-28 | 113 |
| Msa0274040 | MtrunA17_Chr8g0344941 | 29.607 | 331 | 186 | 12 | 33 | 325 | 41 | 362 | 2.96e-28 | 113 |
| Msa0274040 | MtrunA17_Chr8g0344931 | 28.732 | 355 | 205 | 12 | 16 | 338 | 22 | 360 | 5.23e-28 | 112 |
| Msa0274040 | MtrunA17_Chr6g0455661 | 28.571 | 245 | 145 | 5 | 121 | 338 | 230 | 471 | 7.47e-26 | 107 |
| Msa0274040 | MtrunA17_Chr6g0455661 | 48.649 | 111 | 46 | 3 | 32 | 142 | 30 | 129 | 5.82e-25 | 105 |
| Msa0274040 | MtrunA17_Chr8g0349301 | 32.068 | 237 | 141 | 8 | 14 | 244 | 19 | 241 | 2.26e-25 | 104 |
| Msa0274040 | MtrunA17_Chr6g0459921 | 28.333 | 240 | 142 | 5 | 126 | 338 | 124 | 360 | 6.76e-25 | 103 |
| Msa0274040 | MtrunA17_Chr6g0469511 | 45.238 | 126 | 63 | 4 | 18 | 139 | 15 | 138 | 9.82e-25 | 97.8 |
| Msa0274040 | MtrunA17_Chr4g0027561 | 43.478 | 115 | 62 | 2 | 10 | 121 | 7 | 121 | 1.57e-23 | 94.7 |
| Msa0274040 | MtrunA17_Chr2g0285051 | 64.706 | 85 | 27 | 1 | 6 | 87 | 6 | 90 | 1.71e-21 | 88.6 |
| Msa0274040 | MtrunA17_Chr8g0370981 | 30.396 | 227 | 137 | 7 | 9 | 222 | 19 | 237 | 1.42e-20 | 92.0 |
| Msa0274040 | MtrunA17_Chr2g0285031 | 50.667 | 75 | 37 | 0 | 268 | 342 | 7 | 81 | 2.84e-18 | 78.6 |
| Msa0274040 | MtrunA17_Chr1g0189921 | 46.067 | 89 | 46 | 2 | 35 | 121 | 33 | 121 | 4.01e-18 | 80.5 |
| Msa0274040 | MtrunA17_Chr8g0370971 | 41.667 | 120 | 62 | 3 | 10 | 121 | 14 | 133 | 5.54e-18 | 80.5 |
| Msa0274040 | MtrunA17_Chr2g0321991 | 46.154 | 91 | 44 | 3 | 30 | 116 | 30 | 119 | 6.01e-18 | 79.0 |
| Msa0274040 | MtrunA17_Chr8g0349331 | 24.561 | 342 | 178 | 11 | 34 | 339 | 36 | 333 | 1.10e-16 | 80.1 |
| Msa0274040 | MtrunA17_Chr2g0308201 | 48.193 | 83 | 42 | 1 | 4 | 86 | 7 | 88 | 1.21e-16 | 74.3 |
| Msa0274040 | MtrunA17_Chr6g0450721 | 25.797 | 345 | 187 | 15 | 32 | 331 | 32 | 352 | 4.59e-16 | 78.6 |
| Msa0274040 | MtrunA17_Chr6g0450711 | 26.934 | 349 | 185 | 14 | 28 | 322 | 117 | 449 | 5.37e-16 | 79.0 |
| Msa0274040 | MtrunA17_Chr8g0381581 | 23.204 | 362 | 211 | 11 | 5 | 309 | 11 | 362 | 3.29e-15 | 76.3 |
| Msa0274040 | MtrunA17_Chr1g0178931 | 24.843 | 318 | 175 | 14 | 34 | 311 | 38 | 331 | 3.56e-15 | 75.9 |
| Msa0274040 | MtrunA17_Chr1g0160031 | 24.650 | 357 | 199 | 12 | 4 | 309 | 19 | 356 | 8.11e-15 | 74.7 |
| Msa0274040 | MtrunA17_Chr6g0450731 | 24.699 | 332 | 195 | 13 | 32 | 322 | 32 | 349 | 1.15e-14 | 74.3 |
| Msa0274040 | MtrunA17_Chr1g0160011 | 25.862 | 232 | 145 | 8 | 9 | 231 | 25 | 238 | 7.87e-14 | 72.0 |
| Msa0274040 | MtrunA17_Chr1g0198351 | 26.235 | 324 | 163 | 18 | 34 | 311 | 44 | 337 | 1.45e-13 | 70.9 |
| Msa0274040 | MtrunA17_Chr2g0283511 | 27.901 | 362 | 198 | 19 | 6 | 315 | 5 | 355 | 1.62e-13 | 70.9 |
| Msa0274040 | MtrunA17_Chr3g0104821 | 24.484 | 339 | 193 | 12 | 34 | 320 | 45 | 372 | 3.10e-13 | 70.1 |
| Msa0274040 | MtrunA17_Chr1g0178941 | 23.292 | 322 | 183 | 9 | 34 | 311 | 41 | 342 | 7.67e-13 | 68.9 |
| Msa0274040 | MtrunA17_Chr1g0160101 | 22.074 | 376 | 225 | 10 | 9 | 330 | 18 | 379 | 1.77e-12 | 67.8 |
| Msa0274040 | MtrunA17_Chr3g0104801 | 36.842 | 95 | 57 | 2 | 33 | 125 | 44 | 137 | 2.90e-12 | 64.7 |
| Msa0274040 | MtrunA17_Chr4g0018561 | 42.466 | 73 | 41 | 1 | 10 | 81 | 7 | 79 | 3.41e-12 | 62.4 |
| Msa0274040 | MtrunA17_Chr2g0283501 | 27.016 | 248 | 150 | 9 | 3 | 235 | 7 | 238 | 1.75e-11 | 64.7 |
| Msa0274040 | MtrunA17_Chr1g0159971 | 26.087 | 230 | 150 | 8 | 3 | 223 | 19 | 237 | 8.85e-11 | 62.8 |
| Msa0274040 | MtrunA17_Chr7g0266061 | 23.284 | 335 | 186 | 14 | 28 | 318 | 37 | 344 | 9.38e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274040 | AT1G29670.1 | 44.262 | 366 | 172 | 8 | 1 | 338 | 1 | 362 | 2.03e-101 | 303 |
| Msa0274040 | AT1G29670.2 | 44.262 | 366 | 172 | 8 | 1 | 338 | 69 | 430 | 3.25e-100 | 303 |
| Msa0274040 | AT1G29660.1 | 43.052 | 367 | 176 | 7 | 1 | 338 | 1 | 363 | 2.31e-98 | 296 |
| Msa0274040 | AT4G18970.1 | 44.282 | 341 | 159 | 7 | 27 | 338 | 22 | 360 | 3.46e-93 | 282 |
| Msa0274040 | AT5G45670.1 | 44.643 | 336 | 155 | 7 | 31 | 337 | 27 | 360 | 6.14e-93 | 282 |
| Msa0274040 | AT4G18970.2 | 44.282 | 341 | 159 | 7 | 27 | 338 | 22 | 360 | 4.10e-92 | 281 |
| Msa0274040 | AT1G33811.1 | 40.233 | 343 | 169 | 6 | 28 | 337 | 29 | 368 | 7.61e-85 | 261 |
| Msa0274040 | AT2G19010.1 | 41.543 | 337 | 160 | 6 | 8 | 320 | 10 | 333 | 1.66e-81 | 252 |
| Msa0274040 | AT2G19010.2 | 41.543 | 337 | 160 | 6 | 8 | 320 | 40 | 363 | 1.25e-80 | 251 |
| Msa0274040 | AT2G19050.1 | 41.720 | 314 | 151 | 6 | 30 | 319 | 28 | 333 | 3.02e-74 | 233 |
| Msa0274040 | AT1G71691.2 | 36.686 | 338 | 182 | 7 | 27 | 337 | 49 | 381 | 2.72e-71 | 227 |
| Msa0274040 | AT4G30140.1 | 39.818 | 329 | 166 | 4 | 30 | 337 | 30 | 347 | 6.64e-67 | 214 |
| Msa0274040 | AT2G19060.1 | 39.514 | 329 | 166 | 7 | 6 | 309 | 4 | 324 | 1.11e-66 | 214 |
| Msa0274040 | AT5G08460.1 | 37.427 | 342 | 176 | 9 | 29 | 336 | 45 | 382 | 2.36e-64 | 209 |
| Msa0274040 | AT2G19050.2 | 45.161 | 248 | 108 | 4 | 30 | 257 | 28 | 267 | 2.72e-64 | 206 |
| Msa0274040 | AT5G15720.1 | 38.177 | 351 | 174 | 11 | 26 | 338 | 18 | 363 | 1.48e-62 | 204 |
| Msa0274040 | AT1G71691.3 | 39.600 | 250 | 129 | 4 | 27 | 257 | 49 | 295 | 5.39e-56 | 185 |
| Msa0274040 | AT1G71250.1 | 34.694 | 343 | 188 | 9 | 25 | 336 | 33 | 370 | 6.52e-56 | 187 |
| Msa0274040 | AT3G50400.1 | 33.957 | 374 | 203 | 14 | 6 | 338 | 3 | 373 | 2.38e-50 | 172 |
| Msa0274040 | AT5G37690.1 | 34.494 | 316 | 173 | 10 | 34 | 319 | 28 | 339 | 1.93e-48 | 167 |
| Msa0274040 | AT3G04290.1 | 33.136 | 338 | 174 | 10 | 35 | 333 | 31 | 355 | 1.25e-46 | 162 |
| Msa0274040 | AT4G28780.1 | 30.189 | 371 | 215 | 12 | 1 | 337 | 1 | 361 | 2.14e-46 | 162 |
| Msa0274040 | AT5G15720.2 | 40.945 | 254 | 127 | 7 | 26 | 260 | 18 | 267 | 2.68e-46 | 160 |
| Msa0274040 | AT5G33370.1 | 32.749 | 342 | 178 | 10 | 35 | 337 | 32 | 360 | 4.81e-46 | 160 |
| Msa0274040 | AT2G23540.1 | 32.958 | 355 | 193 | 13 | 7 | 318 | 16 | 368 | 7.21e-46 | 161 |
| Msa0274040 | AT1G71691.1 | 31.095 | 283 | 163 | 7 | 82 | 337 | 3 | 280 | 2.08e-45 | 157 |
| Msa0274040 | AT4G16230.1 | 43.578 | 218 | 113 | 6 | 9 | 223 | 11 | 221 | 2.53e-45 | 155 |
| Msa0274040 | AT1G74460.1 | 36.858 | 331 | 159 | 14 | 24 | 315 | 14 | 333 | 3.47e-44 | 156 |
| Msa0274040 | AT5G37690.2 | 32.595 | 316 | 171 | 11 | 34 | 319 | 28 | 331 | 1.07e-42 | 151 |
| Msa0274040 | AT5G18430.1 | 33.033 | 333 | 183 | 10 | 35 | 333 | 30 | 356 | 1.66e-42 | 151 |
| Msa0274040 | AT3G43570.1 | 33.333 | 330 | 182 | 15 | 8 | 321 | 7 | 314 | 1.25e-40 | 145 |
| Msa0274040 | AT1G59406.1 | 32.378 | 349 | 187 | 14 | 9 | 321 | 8 | 343 | 5.99e-40 | 144 |
| Msa0274040 | AT1G59030.1 | 32.378 | 349 | 187 | 14 | 9 | 321 | 8 | 343 | 5.99e-40 | 144 |
| Msa0274040 | AT1G58725.1 | 32.378 | 349 | 187 | 14 | 9 | 321 | 8 | 343 | 5.99e-40 | 144 |
| Msa0274040 | AT5G42170.1 | 34.259 | 324 | 166 | 12 | 31 | 318 | 48 | 360 | 1.89e-39 | 143 |
| Msa0274040 | AT5G63170.1 | 29.394 | 330 | 195 | 9 | 9 | 311 | 4 | 322 | 1.48e-38 | 140 |
| Msa0274040 | AT5G15720.3 | 34.286 | 280 | 148 | 9 | 92 | 338 | 56 | 332 | 2.85e-38 | 139 |
| Msa0274040 | AT1G75880.1 | 31.044 | 364 | 205 | 14 | 3 | 327 | 19 | 375 | 4.51e-38 | 140 |
| Msa0274040 | AT1G75880.2 | 31.044 | 364 | 204 | 14 | 3 | 327 | 19 | 374 | 4.56e-38 | 140 |
| Msa0274040 | AT1G75890.2 | 30.595 | 353 | 196 | 14 | 8 | 320 | 20 | 363 | 1.53e-37 | 138 |
| Msa0274040 | AT1G75890.3 | 30.595 | 353 | 196 | 14 | 8 | 320 | 49 | 392 | 1.85e-37 | 139 |
| Msa0274040 | AT3G14820.1 | 32.416 | 327 | 177 | 12 | 26 | 318 | 25 | 341 | 2.03e-37 | 137 |
| Msa0274040 | AT5G55050.1 | 31.268 | 355 | 199 | 13 | 21 | 337 | 27 | 374 | 4.04e-37 | 137 |
| Msa0274040 | AT2G04570.1 | 30.925 | 346 | 199 | 11 | 10 | 322 | 7 | 345 | 6.76e-37 | 136 |
| Msa0274040 | AT5G41890.1 | 30.814 | 344 | 192 | 10 | 35 | 336 | 33 | 372 | 1.22e-36 | 136 |
| Msa0274040 | AT3G53100.1 | 31.195 | 343 | 187 | 11 | 14 | 318 | 11 | 342 | 1.27e-36 | 135 |
| Msa0274040 | AT5G22810.1 | 32.764 | 351 | 189 | 14 | 8 | 318 | 7 | 350 | 4.71e-36 | 134 |
| Msa0274040 | AT1G58520.3 | 32.036 | 334 | 181 | 15 | 18 | 320 | 17 | 335 | 1.12e-35 | 133 |
| Msa0274040 | AT1G58525.1 | 32.036 | 334 | 181 | 15 | 18 | 320 | 17 | 335 | 1.12e-35 | 133 |
| Msa0274040 | AT1G75890.1 | 30.137 | 365 | 195 | 16 | 8 | 320 | 20 | 376 | 1.43e-35 | 133 |
| Msa0274040 | AT4G10950.2 | 29.118 | 340 | 204 | 11 | 31 | 338 | 69 | 403 | 1.46e-35 | 134 |
| Msa0274040 | AT1G73610.1 | 29.814 | 322 | 187 | 11 | 27 | 321 | 29 | 338 | 3.08e-35 | 132 |
| Msa0274040 | AT1G20135.1 | 30.655 | 336 | 186 | 14 | 5 | 311 | 6 | 323 | 3.65e-35 | 131 |
| Msa0274040 | AT1G20130.2 | 32.817 | 323 | 174 | 10 | 31 | 314 | 182 | 500 | 1.30e-34 | 133 |
| Msa0274040 | AT1G20130.1 | 32.817 | 323 | 174 | 10 | 31 | 314 | 202 | 520 | 1.69e-34 | 133 |
| Msa0274040 | AT5G03820.1 | 28.286 | 350 | 210 | 13 | 5 | 318 | 4 | 348 | 2.27e-34 | 129 |
| Msa0274040 | AT2G30310.1 | 31.014 | 345 | 183 | 14 | 9 | 311 | 11 | 342 | 5.20e-34 | 129 |
| Msa0274040 | AT5G03820.2 | 28.286 | 350 | 210 | 13 | 5 | 318 | 32 | 376 | 5.31e-34 | 129 |
| Msa0274040 | AT3G16370.1 | 30.435 | 322 | 185 | 12 | 31 | 318 | 28 | 344 | 5.42e-34 | 128 |
| Msa0274040 | AT2G30220.1 | 32.188 | 320 | 167 | 14 | 32 | 311 | 32 | 341 | 8.44e-34 | 128 |
| Msa0274040 | AT4G10950.1 | 29.118 | 340 | 200 | 12 | 31 | 338 | 69 | 399 | 1.27e-33 | 128 |
| Msa0274040 | AT2G42990.1 | 28.267 | 329 | 198 | 10 | 29 | 324 | 24 | 347 | 1.16e-32 | 125 |
| Msa0274040 | AT3G43550.1 | 35.398 | 226 | 127 | 8 | 8 | 229 | 7 | 217 | 5.80e-32 | 121 |
| Msa0274040 | AT2G31540.1 | 30.086 | 349 | 201 | 13 | 3 | 315 | 6 | 347 | 1.20e-31 | 122 |
| Msa0274040 | AT1G20132.1 | 30.000 | 330 | 177 | 12 | 32 | 320 | 60 | 376 | 1.28e-31 | 122 |
| Msa0274040 | AT5G33370.2 | 32.830 | 265 | 135 | 7 | 35 | 267 | 32 | 285 | 1.41e-31 | 121 |
| Msa0274040 | AT4G26790.1 | 31.928 | 332 | 180 | 15 | 29 | 322 | 25 | 348 | 1.49e-31 | 122 |
| Msa0274040 | AT4G26790.2 | 31.928 | 332 | 180 | 15 | 29 | 322 | 25 | 348 | 1.49e-31 | 122 |
| Msa0274040 | AT5G03810.1 | 28.205 | 351 | 208 | 14 | 5 | 318 | 1 | 344 | 2.19e-31 | 121 |
| Msa0274040 | AT2G03980.2 | 29.167 | 312 | 177 | 9 | 32 | 308 | 42 | 344 | 3.22e-31 | 121 |
| Msa0274040 | AT2G03980.3 | 29.167 | 312 | 177 | 9 | 32 | 308 | 42 | 344 | 3.22e-31 | 121 |
| Msa0274040 | AT2G03980.1 | 29.167 | 312 | 177 | 9 | 32 | 308 | 42 | 344 | 3.22e-31 | 121 |
| Msa0274040 | AT2G03980.4 | 29.167 | 312 | 177 | 9 | 32 | 308 | 42 | 344 | 3.22e-31 | 121 |
| Msa0274040 | AT1G06990.1 | 26.836 | 354 | 210 | 11 | 8 | 320 | 8 | 353 | 8.33e-31 | 120 |
| Msa0274040 | AT5G45960.1 | 28.829 | 333 | 194 | 12 | 28 | 321 | 42 | 370 | 1.75e-30 | 119 |
| Msa0274040 | AT1G23500.1 | 29.738 | 343 | 192 | 13 | 13 | 320 | 10 | 338 | 1.95e-30 | 119 |
| Msa0274040 | AT2G24560.1 | 29.310 | 348 | 199 | 13 | 5 | 311 | 1 | 342 | 6.04e-30 | 118 |
| Msa0274040 | AT1G71120.1 | 28.571 | 350 | 197 | 14 | 29 | 341 | 27 | 360 | 9.78e-30 | 117 |
| Msa0274040 | AT1G58430.1 | 28.947 | 342 | 190 | 15 | 14 | 311 | 11 | 343 | 1.15e-29 | 117 |
| Msa0274040 | AT5G45950.1 | 27.164 | 335 | 210 | 10 | 11 | 317 | 18 | 346 | 1.54e-29 | 116 |
| Msa0274040 | AT1G75930.1 | 27.515 | 338 | 201 | 11 | 10 | 315 | 6 | 331 | 2.27e-29 | 115 |
| Msa0274040 | AT1G75900.1 | 28.613 | 346 | 200 | 11 | 10 | 318 | 20 | 355 | 1.23e-28 | 114 |
| Msa0274040 | AT1G53920.1 | 28.571 | 336 | 196 | 11 | 26 | 325 | 41 | 368 | 2.97e-28 | 113 |
| Msa0274040 | AT2G40250.1 | 26.852 | 324 | 193 | 10 | 31 | 316 | 34 | 351 | 1.10e-26 | 108 |
| Msa0274040 | AT1G75920.2 | 28.213 | 319 | 189 | 12 | 32 | 320 | 28 | 336 | 7.13e-26 | 106 |
| Msa0274040 | AT2G04020.2 | 29.667 | 300 | 173 | 11 | 32 | 320 | 42 | 314 | 8.89e-26 | 105 |
| Msa0274040 | AT1G20120.1 | 27.019 | 322 | 197 | 10 | 32 | 320 | 77 | 393 | 2.64e-25 | 105 |
| Msa0274040 | AT5G40990.1 | 27.493 | 371 | 222 | 12 | 7 | 338 | 10 | 372 | 7.50e-25 | 103 |
| Msa0274040 | AT1G75910.1 | 29.217 | 332 | 190 | 13 | 25 | 324 | 22 | 340 | 2.38e-24 | 102 |
| Msa0274040 | AT2G24560.2 | 34.061 | 229 | 135 | 9 | 5 | 222 | 1 | 224 | 2.61e-24 | 101 |
| Msa0274040 | AT2G04020.1 | 34.715 | 193 | 112 | 6 | 32 | 219 | 42 | 225 | 4.30e-23 | 97.1 |
| Msa0274040 | AT3G14225.2 | 27.557 | 352 | 203 | 13 | 28 | 338 | 32 | 372 | 7.04e-23 | 98.6 |
| Msa0274040 | AT3G14225.1 | 27.401 | 354 | 205 | 13 | 28 | 338 | 32 | 376 | 1.58e-22 | 97.8 |
| Msa0274040 | AT1G75920.1 | 26.946 | 334 | 189 | 13 | 32 | 320 | 23 | 346 | 3.67e-22 | 96.3 |
| Msa0274040 | AT4G16220.1 | 48.305 | 118 | 55 | 4 | 1 | 116 | 1 | 114 | 7.96e-22 | 93.2 |
| Msa0274040 | AT1G53990.1 | 27.083 | 384 | 212 | 15 | 4 | 341 | 5 | 366 | 2.98e-21 | 94.0 |
| Msa0274040 | AT1G28570.1 | 27.520 | 367 | 189 | 16 | 9 | 315 | 8 | 357 | 1.74e-19 | 89.0 |
| Msa0274040 | AT1G53940.2 | 26.857 | 350 | 198 | 12 | 33 | 338 | 39 | 374 | 5.55e-19 | 87.4 |
| Msa0274040 | AT5G03610.1 | 26.216 | 370 | 205 | 17 | 1 | 321 | 1 | 351 | 1.50e-17 | 83.2 |
| Msa0274040 | AT1G75920.4 | 26.531 | 294 | 176 | 12 | 57 | 320 | 25 | 308 | 1.62e-17 | 82.4 |
| Msa0274040 | AT1G53940.1 | 30.603 | 232 | 132 | 9 | 13 | 230 | 18 | 234 | 1.35e-16 | 79.7 |
| Msa0274040 | AT2G27360.1 | 26.829 | 369 | 194 | 16 | 4 | 315 | 8 | 357 | 1.45e-16 | 80.5 |
| Msa0274040 | AT1G31550.2 | 31.604 | 212 | 115 | 10 | 23 | 221 | 30 | 224 | 4.14e-16 | 79.3 |
| Msa0274040 | AT1G31550.1 | 31.604 | 212 | 115 | 10 | 23 | 221 | 30 | 224 | 4.19e-16 | 79.3 |
| Msa0274040 | AT3G09930.2 | 25.714 | 315 | 175 | 16 | 34 | 308 | 40 | 335 | 3.15e-15 | 76.3 |
| Msa0274040 | AT3G09930.1 | 25.714 | 315 | 175 | 16 | 34 | 308 | 40 | 335 | 3.15e-15 | 76.3 |
| Msa0274040 | AT1G28580.1 | 26.149 | 348 | 166 | 16 | 34 | 315 | 38 | 360 | 9.31e-15 | 75.1 |
| Msa0274040 | AT1G28600.1 | 24.868 | 378 | 201 | 18 | 29 | 344 | 22 | 378 | 4.84e-14 | 73.2 |
| Msa0274040 | AT4G16233.1 | 35.537 | 121 | 66 | 5 | 230 | 341 | 15 | 132 | 5.21e-14 | 68.9 |
| Msa0274040 | AT1G54020.2 | 25.272 | 368 | 215 | 19 | 3 | 337 | 7 | 347 | 5.73e-14 | 72.8 |
| Msa0274040 | AT1G28610.1 | 30.052 | 193 | 108 | 10 | 1 | 179 | 4 | 183 | 1.42e-13 | 70.1 |
| Msa0274040 | AT1G28600.2 | 30.247 | 162 | 89 | 8 | 29 | 173 | 22 | 176 | 9.32e-13 | 67.4 |
| Msa0274040 | AT1G28670.1 | 26.693 | 251 | 151 | 12 | 1 | 233 | 5 | 240 | 1.13e-12 | 68.9 |
| Msa0274040 | AT3G27950.1 | 23.747 | 379 | 208 | 12 | 3 | 322 | 2 | 358 | 1.71e-12 | 68.2 |
| Msa0274040 | AT1G28660.1 | 26.050 | 238 | 141 | 11 | 1 | 221 | 5 | 224 | 3.32e-12 | 67.4 |
| Msa0274040 | AT1G28640.1 | 26.695 | 236 | 142 | 11 | 1 | 221 | 5 | 224 | 7.78e-12 | 66.2 |
| Msa0274040 | AT1G67830.1 | 25.146 | 342 | 200 | 13 | 28 | 318 | 25 | 361 | 8.29e-12 | 66.2 |
| Msa0274040 | AT1G54010.1 | 23.907 | 343 | 206 | 15 | 31 | 337 | 32 | 355 | 1.00e-11 | 65.9 |
| Msa0274040 | AT1G54000.1 | 22.667 | 375 | 234 | 15 | 3 | 342 | 7 | 360 | 2.09e-11 | 65.1 |
| Msa0274040 | AT3G14210.1 | 24.638 | 345 | 197 | 13 | 33 | 337 | 36 | 357 | 3.31e-11 | 64.3 |
| Msa0274040 | AT1G28660.2 | 26.582 | 237 | 140 | 11 | 1 | 221 | 5 | 223 | 3.53e-11 | 64.3 |
| Msa0274040 | AT3G14220.1 | 24.047 | 341 | 204 | 12 | 32 | 337 | 31 | 351 | 3.91e-11 | 63.9 |
Find 85 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGATTCATCTAATAATTC+AGG | 0.225334 | 2_3:+5799381 | Msa0274040:CDS |
| AGAGTTATCTTTGAATTTAC+TGG | 0.229234 | 2_3:+5798810 | Msa0274040:CDS |
| TTGATTGCAGCTCAACTTCT+TGG | 0.235748 | 2_3:+5798364 | Msa0274040:intron |
| TTAAATCAAATAAGTGTAAT+TGG | 0.258101 | 2_3:+5799586 | Msa0274040:three_prime_UTR |
| GTGCCTTGTGTATTTATCTT+TGG | 0.270186 | 2_3:+5798128 | Msa0274040:CDS |
| TATGACTTGTTGGGTAGAAT+TGG | 0.306114 | 2_3:-5798750 | None:intergenic |
| TGCTTGTATTATGTGAATAT+TGG | 0.306140 | 2_3:+5798694 | Msa0274040:CDS |
| ATGACTTGTTGGGTAGAATT+GGG | 0.322325 | 2_3:-5798749 | None:intergenic |
| TGTTGAACAAGAAATTGATA+TGG | 0.325815 | 2_3:+5799434 | Msa0274040:CDS |
| AAATGTAATTACAAACCTTA+TGG | 0.329477 | 2_3:+5798200 | Msa0274040:CDS |
| ACAAGAAATTGATATGGAAT+TGG | 0.334843 | 2_3:+5799440 | Msa0274040:CDS |
| CACAATCCATTCAACCTTGA+TGG | 0.349633 | 2_3:-5799258 | None:intergenic |
| GGGCTATAAGTATGACTTGT+TGG | 0.353512 | 2_3:-5798760 | None:intergenic |
| ATAGAAGTGACTATGCGTTT+TGG | 0.364837 | 2_3:+5799307 | Msa0274040:CDS |
| CGAGAAAATATGTGTTAGTT+GGG | 0.371873 | 2_3:+5798952 | Msa0274040:CDS |
| GCGAGAAAATATGTGTTAGT+TGG | 0.388425 | 2_3:+5798951 | Msa0274040:CDS |
| CAGGGTTATGCTATTAGCTT+GGG | 0.390236 | 2_3:+5798583 | Msa0274040:intron |
| TCGACCGTTGGTAAATCTTC+CGG | 0.391397 | 2_3:-5798246 | None:intergenic |
| GACTTTCCGATGGGCCCAAC+CGG | 0.406171 | 2_3:+5798227 | Msa0274040:CDS |
| TGTTGTCCATCAAGGTTGAA+TGG | 0.412513 | 2_3:+5799252 | Msa0274040:CDS |
| GGAGACTCTTTATCTGATAG+TGG | 0.414420 | 2_3:+5798149 | Msa0274040:CDS |
| AAAATATGTGTTAGTTGGGT+TGG | 0.414588 | 2_3:+5798956 | Msa0274040:CDS |
| ATTTGATACTTTAGCAAAAG+AGG | 0.417853 | 2_3:+5799651 | Msa0274040:three_prime_UTR |
| TAAGTGGATGATAATTAAGT+TGG | 0.426107 | 2_3:+5799685 | Msa0274040:three_prime_UTR |
| AGAGCTTCTGCATACTGCTC+AGG | 0.428284 | 2_3:-5798781 | None:intergenic |
| AAATATGTGTTAGTTGGGTT+GGG | 0.439264 | 2_3:+5798957 | Msa0274040:CDS |
| TTTGCAGACAAAAGAAGAAT+AGG | 0.444279 | 2_3:-5798071 | None:intergenic |
| TAAAATTATTACCATCTGAC+AGG | 0.445247 | 2_3:-5799103 | None:intergenic |
| CATAATACAAGCATTTGTTA+AGG | 0.448958 | 2_3:-5798684 | None:intergenic |
| TTAGACTTTCTTCTTAGAGA+TGG | 0.451991 | 2_3:+5798019 | Msa0274040:exon |
| AATTATGCATCTGGCGGAGC+TGG | 0.452172 | 2_3:+5798448 | Msa0274040:CDS |
| CGTTGGTAAATCTTCCGGTT+GGG | 0.464773 | 2_3:-5798241 | None:intergenic |
| TCTCAAATTGCTAGCAGACT+TGG | 0.466523 | 2_3:+5798637 | Msa0274040:CDS |
| ACAGGGTTATGCTATTAGCT+TGG | 0.468271 | 2_3:+5798582 | Msa0274040:intron |
| ATGCTCCTTGTTGTCCATCA+AGG | 0.468990 | 2_3:+5799244 | Msa0274040:CDS |
| GGCTATAAGTATGACTTGTT+GGG | 0.471958 | 2_3:-5798759 | None:intergenic |
| GAAAAGATTGTATCAAATGT+AGG | 0.477042 | 2_3:-5799534 | None:intergenic |
| TGACTTGTTGGGTAGAATTG+GGG | 0.484356 | 2_3:-5798748 | None:intergenic |
| ACAAGGTGCTTAATATCCAT+TGG | 0.485696 | 2_3:-5799414 | None:intergenic |
| AGATAAATACACAAGGCACT+TGG | 0.485700 | 2_3:-5798124 | None:intergenic |
| AAAGGTGTGAATTATGCATC+TGG | 0.501240 | 2_3:+5798439 | Msa0274040:CDS |
| TGTTTGCAACGATGTGTCAA+TGG | 0.506257 | 2_3:+5798095 | Msa0274040:CDS |
| ATCGGAAAGTCAACTCCATA+AGG | 0.507575 | 2_3:-5798215 | None:intergenic |
| ATGATTCATCTAATAATTCA+GGG | 0.511656 | 2_3:+5799382 | Msa0274040:CDS |
| AGCTTGTAATTGAAAAGTGA+CGG | 0.519564 | 2_3:-5798996 | None:intergenic |
| CAAATTGCTAGCAGACTTGG+AGG | 0.523023 | 2_3:+5798640 | Msa0274040:CDS |
| AATCTTCCGGTTGGGCCCAT+CGG | 0.538489 | 2_3:-5798233 | None:intergenic |
| GGTACCAAGCCTCGGTGGGA+TGG | 0.539300 | 2_3:-5799338 | None:intergenic |
| TTCAGGGTTCACTTATCCAA+TGG | 0.539520 | 2_3:+5799398 | Msa0274040:CDS |
| CCGTTGGTAAATCTTCCGGT+TGG | 0.540057 | 2_3:-5798242 | None:intergenic |
| AGAGGTGACTCACAGTTAAG+TGG | 0.542257 | 2_3:+5799669 | Msa0274040:three_prime_UTR |
| TTACAAGCTTAAATCTCTAG+TGG | 0.542536 | 2_3:+5799010 | Msa0274040:CDS |
| GAGTCAGATGCCCTGTCAGA+TGG | 0.545719 | 2_3:+5799092 | Msa0274040:CDS |
| GTCAACTGCAGTTCGACCGT+TGG | 0.545979 | 2_3:-5798258 | None:intergenic |
| CCACCATTTGCAAACATCAG+TGG | 0.549194 | 2_3:+5798403 | Msa0274040:CDS |
| AATTCGAATGGAGACATACT+CGG | 0.551240 | 2_3:+5798471 | Msa0274040:CDS |
| AAGTCCATCCCACCGAGGCT+TGG | 0.557254 | 2_3:+5799334 | Msa0274040:CDS |
| TATGGAGTTGACTTTCCGAT+GGG | 0.557413 | 2_3:+5798218 | Msa0274040:CDS |
| CACAAATAGAATCAAACGTA+AGG | 0.557723 | 2_3:-5799617 | None:intergenic |
| GATAAATACACAAGGCACTT+GGG | 0.558640 | 2_3:-5798123 | None:intergenic |
| ACATTCTTGTTGCAATGAGA+AGG | 0.562394 | 2_3:-5799359 | None:intergenic |
| AATGGAGACATACTCGGCTA+AGG | 0.563484 | 2_3:+5798477 | Msa0274040:CDS |
| TTCTATAATCAAGACATGGT+TGG | 0.565519 | 2_3:+5798043 | Msa0274040:CDS |
| GAACCACTGATGTTTGCAAA+TGG | 0.568931 | 2_3:-5798406 | None:intergenic |
| TTCCAGGCTCTACATGACAT+TGG | 0.569074 | 2_3:+5798927 | Msa0274040:intron |
| TTATGGAGTTGACTTTCCGA+TGG | 0.573033 | 2_3:+5798217 | Msa0274040:CDS |
| GTTTGCAACGATGTGTCAAT+GGG | 0.576378 | 2_3:+5798096 | Msa0274040:CDS |
| TGGCGGAGCTGGAATTCGAA+TGG | 0.584028 | 2_3:+5798459 | Msa0274040:CDS |
| TAGTCACTTCTATTATAGCA+TGG | 0.591052 | 2_3:-5799297 | None:intergenic |
| CCACTGATGTTTGCAAATGG+TGG | 0.591872 | 2_3:-5798403 | None:intergenic |
| GAGCTTCTGCATACTGCTCA+GGG | 0.600756 | 2_3:-5798780 | None:intergenic |
| ACTTGAACGTATTTAAGTAG+AGG | 0.601298 | 2_3:-5799484 | None:intergenic |
| AGAAGGTACCAAGCCTCGGT+GGG | 0.623013 | 2_3:-5799342 | None:intergenic |
| AATGAGAAGGTACCAAGCCT+CGG | 0.626887 | 2_3:-5799346 | None:intergenic |
| TTCAACCTTGATGGACAACA+AGG | 0.627150 | 2_3:-5799249 | None:intergenic |
| TATCAATTTCTTGTTCAACA+AGG | 0.630157 | 2_3:-5799431 | None:intergenic |
| GAGAAGGTACCAAGCCTCGG+TGG | 0.634613 | 2_3:-5799343 | None:intergenic |
| AAATAGAATCAAACGTAAGG+TGG | 0.643932 | 2_3:-5799614 | None:intergenic |
| AGTGGTTCAGACATACTCAA+AGG | 0.657804 | 2_3:+5798421 | Msa0274040:CDS |
| AAAATTATTACCATCTGACA+GGG | 0.687534 | 2_3:-5799102 | None:intergenic |
| GGTGTGAATTATGCATCTGG+CGG | 0.694456 | 2_3:+5798442 | Msa0274040:CDS |
| TGGATTCTATAATCAAGACA+TGG | 0.712050 | 2_3:+5798039 | Msa0274040:CDS |
| TCTCCAAAGATAAATACACA+AGG | 0.735148 | 2_3:-5798131 | None:intergenic |
| GGATGAAGTCCATCCCACCG+AGG | 0.748304 | 2_3:+5799329 | Msa0274040:CDS |
| CCAACCGGAAGATTTACCAA+CGG | 0.762608 | 2_3:+5798242 | Msa0274040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCAATATATATAATATGA+TGG | + | chr2_3:5798886-5798905 | Msa0274040:intron | 10.0% |
| !! | ATTCAATATATATAATATGA+TGG | + | chr2_3:5798886-5798905 | Msa0274040:intron | 10.0% |
| !! | TTAAATCAAATAAGTGTAAT+TGG | + | chr2_3:5799586-5799605 | Msa0274040:three_prime_UTR | 15.0% |
| !! | TTAAATCAAATAAGTGTAAT+TGG | + | chr2_3:5799586-5799605 | Msa0274040:three_prime_UTR | 15.0% |
| !! | AAATGTAATTACAAACCTTA+TGG | + | chr2_3:5798200-5798219 | Msa0274040:CDS | 20.0% |
| !! | AATAATATAGCCAAGTTAAA+AGG | - | chr2_3:5798298-5798317 | None:intergenic | 20.0% |
| !! | TATGATTCATCTAATAATTC+AGG | + | chr2_3:5799381-5799400 | Msa0274040:CDS | 20.0% |
| !! | ATGATTCATCTAATAATTCA+GGG | + | chr2_3:5799382-5799401 | Msa0274040:CDS | 20.0% |
| !! | AAATGTAATTACAAACCTTA+TGG | + | chr2_3:5798200-5798219 | Msa0274040:CDS | 20.0% |
| !! | AATAATATAGCCAAGTTAAA+AGG | - | chr2_3:5798298-5798317 | None:intergenic | 20.0% |
| !! | TATGATTCATCTAATAATTC+AGG | + | chr2_3:5799381-5799400 | Msa0274040:CDS | 20.0% |
| !! | ATGATTCATCTAATAATTCA+GGG | + | chr2_3:5799382-5799401 | Msa0274040:CDS | 20.0% |
| !! | TTTGTAATTACATTTTGCAG+AGG | - | chr2_3:5798195-5798214 | None:intergenic | 25.0% |
| !!! | TAAGTAACATCCTTTTAACT+TGG | + | chr2_3:5798285-5798304 | Msa0274040:intron | 25.0% |
| !! | CATAATACAAGCATTTGTTA+AGG | - | chr2_3:5798687-5798706 | None:intergenic | 25.0% |
| ! | TGCTTGTATTATGTGAATAT+TGG | + | chr2_3:5798694-5798713 | Msa0274040:CDS | 25.0% |
| ! | AGAGTTATCTTTGAATTTAC+TGG | + | chr2_3:5798810-5798829 | Msa0274040:CDS | 25.0% |
| ! | AAAATTATTACCATCTGACA+GGG | - | chr2_3:5799105-5799124 | None:intergenic | 25.0% |
| ! | TAAAATTATTACCATCTGAC+AGG | - | chr2_3:5799106-5799125 | None:intergenic | 25.0% |
| ! | TATCAATTTCTTGTTCAACA+AGG | - | chr2_3:5799434-5799453 | None:intergenic | 25.0% |
| ! | TGTTGAACAAGAAATTGATA+TGG | + | chr2_3:5799434-5799453 | Msa0274040:CDS | 25.0% |
| ! | ACAAGAAATTGATATGGAAT+TGG | + | chr2_3:5799440-5799459 | Msa0274040:CDS | 25.0% |
| ! | GAAAAGATTGTATCAAATGT+AGG | - | chr2_3:5799537-5799556 | None:intergenic | 25.0% |
| ! | ATTTGATACTTTAGCAAAAG+AGG | + | chr2_3:5799651-5799670 | Msa0274040:three_prime_UTR | 25.0% |
| ! | TAAGTGGATGATAATTAAGT+TGG | + | chr2_3:5799685-5799704 | Msa0274040:three_prime_UTR | 25.0% |
| !! | TTTGTAATTACATTTTGCAG+AGG | - | chr2_3:5798195-5798214 | None:intergenic | 25.0% |
| !!! | TAAGTAACATCCTTTTAACT+TGG | + | chr2_3:5798285-5798304 | Msa0274040:intron | 25.0% |
| !! | CATAATACAAGCATTTGTTA+AGG | - | chr2_3:5798687-5798706 | None:intergenic | 25.0% |
| ! | TGCTTGTATTATGTGAATAT+TGG | + | chr2_3:5798694-5798713 | Msa0274040:CDS | 25.0% |
| ! | AGAGTTATCTTTGAATTTAC+TGG | + | chr2_3:5798810-5798829 | Msa0274040:CDS | 25.0% |
| ! | AAAATTATTACCATCTGACA+GGG | - | chr2_3:5799105-5799124 | None:intergenic | 25.0% |
| ! | TAAAATTATTACCATCTGAC+AGG | - | chr2_3:5799106-5799125 | None:intergenic | 25.0% |
| ! | TATCAATTTCTTGTTCAACA+AGG | - | chr2_3:5799434-5799453 | None:intergenic | 25.0% |
| ! | TGTTGAACAAGAAATTGATA+TGG | + | chr2_3:5799434-5799453 | Msa0274040:CDS | 25.0% |
| ! | ACAAGAAATTGATATGGAAT+TGG | + | chr2_3:5799440-5799459 | Msa0274040:CDS | 25.0% |
| ! | GAAAAGATTGTATCAAATGT+AGG | - | chr2_3:5799537-5799556 | None:intergenic | 25.0% |
| ! | ATTTGATACTTTAGCAAAAG+AGG | + | chr2_3:5799651-5799670 | Msa0274040:three_prime_UTR | 25.0% |
| ! | TAAGTGGATGATAATTAAGT+TGG | + | chr2_3:5799685-5799704 | Msa0274040:three_prime_UTR | 25.0% |
| TTAGACTTTCTTCTTAGAGA+TGG | + | chr2_3:5798019-5798038 | Msa0274040:exon | 30.0% | |
| TGGATTCTATAATCAAGACA+TGG | + | chr2_3:5798039-5798058 | Msa0274040:CDS | 30.0% | |
| TTCTATAATCAAGACATGGT+TGG | + | chr2_3:5798043-5798062 | Msa0274040:CDS | 30.0% | |
| TTTGCAGACAAAAGAAGAAT+AGG | - | chr2_3:5798074-5798093 | None:intergenic | 30.0% | |
| TCTCCAAAGATAAATACACA+AGG | - | chr2_3:5798134-5798153 | None:intergenic | 30.0% | |
| ! | TAATTACATTTTGCAGAGGT+AGG | - | chr2_3:5798191-5798210 | None:intergenic | 30.0% |
| !!! | CGGACATAATGTTATTTTTG+CGG | - | chr2_3:5798561-5798580 | None:intergenic | 30.0% |
| AAATAACATTATGTCCGTAC+AGG | + | chr2_3:5798564-5798583 | Msa0274040:intron | 30.0% | |
| AATAACATTATGTCCGTACA+GGG | + | chr2_3:5798565-5798584 | Msa0274040:intron | 30.0% | |
| ! | TAAAACACTGAGATTTTGAG+TGG | - | chr2_3:5798843-5798862 | None:intergenic | 30.0% |
| CAATTAGTGAAAGAAAGCAA+GGG | - | chr2_3:5798866-5798885 | None:intergenic | 30.0% | |
| TCAATTAGTGAAAGAAAGCA+AGG | - | chr2_3:5798867-5798886 | None:intergenic | 30.0% | |
| TATTAGTTCCATTTGATTCC+AGG | + | chr2_3:5798911-5798930 | Msa0274040:intron | 30.0% | |
| CGAGAAAATATGTGTTAGTT+GGG | + | chr2_3:5798952-5798971 | Msa0274040:CDS | 30.0% | |
| AAAATATGTGTTAGTTGGGT+TGG | + | chr2_3:5798956-5798975 | Msa0274040:CDS | 30.0% | |
| AAATATGTGTTAGTTGGGTT+GGG | + | chr2_3:5798957-5798976 | Msa0274040:CDS | 30.0% | |
| AGCTTGTAATTGAAAAGTGA+CGG | - | chr2_3:5798999-5799018 | None:intergenic | 30.0% | |
| TTACAAGCTTAAATCTCTAG+TGG | + | chr2_3:5799010-5799029 | Msa0274040:CDS | 30.0% | |
| TAGCTACAGTTTAATGTGAT+TGG | + | chr2_3:5799157-5799176 | Msa0274040:intron | 30.0% | |
| !!! | TCAATGAATCTCAGGTTTTT+TGG | + | chr2_3:5799215-5799234 | Msa0274040:intron | 30.0% |
| TAGTCACTTCTATTATAGCA+TGG | - | chr2_3:5799300-5799319 | None:intergenic | 30.0% | |
| ACTTGAACGTATTTAAGTAG+AGG | - | chr2_3:5799487-5799506 | None:intergenic | 30.0% | |
| AAATAGAATCAAACGTAAGG+TGG | - | chr2_3:5799617-5799636 | None:intergenic | 30.0% | |
| CACAAATAGAATCAAACGTA+AGG | - | chr2_3:5799620-5799639 | None:intergenic | 30.0% | |
| TTAGACTTTCTTCTTAGAGA+TGG | + | chr2_3:5798019-5798038 | Msa0274040:exon | 30.0% | |
| TGGATTCTATAATCAAGACA+TGG | + | chr2_3:5798039-5798058 | Msa0274040:CDS | 30.0% | |
| TTCTATAATCAAGACATGGT+TGG | + | chr2_3:5798043-5798062 | Msa0274040:CDS | 30.0% | |
| TTTGCAGACAAAAGAAGAAT+AGG | - | chr2_3:5798074-5798093 | None:intergenic | 30.0% | |
| TCTCCAAAGATAAATACACA+AGG | - | chr2_3:5798134-5798153 | None:intergenic | 30.0% | |
| ! | TAATTACATTTTGCAGAGGT+AGG | - | chr2_3:5798191-5798210 | None:intergenic | 30.0% |
| !!! | CGGACATAATGTTATTTTTG+CGG | - | chr2_3:5798561-5798580 | None:intergenic | 30.0% |
| AAATAACATTATGTCCGTAC+AGG | + | chr2_3:5798564-5798583 | Msa0274040:intron | 30.0% | |
| AATAACATTATGTCCGTACA+GGG | + | chr2_3:5798565-5798584 | Msa0274040:intron | 30.0% | |
| ! | TAAAACACTGAGATTTTGAG+TGG | - | chr2_3:5798843-5798862 | None:intergenic | 30.0% |
| CAATTAGTGAAAGAAAGCAA+GGG | - | chr2_3:5798866-5798885 | None:intergenic | 30.0% | |
| TCAATTAGTGAAAGAAAGCA+AGG | - | chr2_3:5798867-5798886 | None:intergenic | 30.0% | |
| TATTAGTTCCATTTGATTCC+AGG | + | chr2_3:5798911-5798930 | Msa0274040:intron | 30.0% | |
| CGAGAAAATATGTGTTAGTT+GGG | + | chr2_3:5798952-5798971 | Msa0274040:CDS | 30.0% | |
| AAAATATGTGTTAGTTGGGT+TGG | + | chr2_3:5798956-5798975 | Msa0274040:CDS | 30.0% | |
| AAATATGTGTTAGTTGGGTT+GGG | + | chr2_3:5798957-5798976 | Msa0274040:CDS | 30.0% | |
| AGCTTGTAATTGAAAAGTGA+CGG | - | chr2_3:5798999-5799018 | None:intergenic | 30.0% | |
| TTACAAGCTTAAATCTCTAG+TGG | + | chr2_3:5799010-5799029 | Msa0274040:CDS | 30.0% | |
| TAGCTACAGTTTAATGTGAT+TGG | + | chr2_3:5799157-5799176 | Msa0274040:intron | 30.0% | |
| !!! | TCAATGAATCTCAGGTTTTT+TGG | + | chr2_3:5799215-5799234 | Msa0274040:intron | 30.0% |
| TAGTCACTTCTATTATAGCA+TGG | - | chr2_3:5799300-5799319 | None:intergenic | 30.0% | |
| ACTTGAACGTATTTAAGTAG+AGG | - | chr2_3:5799487-5799506 | None:intergenic | 30.0% | |
| AAATAGAATCAAACGTAAGG+TGG | - | chr2_3:5799617-5799636 | None:intergenic | 30.0% | |
| CACAAATAGAATCAAACGTA+AGG | - | chr2_3:5799620-5799639 | None:intergenic | 30.0% | |
| ! | GATAAATACACAAGGCACTT+GGG | - | chr2_3:5798126-5798145 | None:intergenic | 35.0% |
| ! | AGATAAATACACAAGGCACT+TGG | - | chr2_3:5798127-5798146 | None:intergenic | 35.0% |
| GTGCCTTGTGTATTTATCTT+TGG | + | chr2_3:5798128-5798147 | Msa0274040:CDS | 35.0% | |
| ! | AAAGGTGTGAATTATGCATC+TGG | + | chr2_3:5798439-5798458 | Msa0274040:CDS | 35.0% |
| AATTCGAATGGAGACATACT+CGG | + | chr2_3:5798471-5798490 | Msa0274040:CDS | 35.0% | |
| !! | ATGACTTGTTGGGTAGAATT+GGG | - | chr2_3:5798752-5798771 | None:intergenic | 35.0% |
| !! | TATGACTTGTTGGGTAGAAT+TGG | - | chr2_3:5798753-5798772 | None:intergenic | 35.0% |
| !! | GGCTATAAGTATGACTTGTT+GGG | - | chr2_3:5798762-5798781 | None:intergenic | 35.0% |
| GCGAGAAAATATGTGTTAGT+TGG | + | chr2_3:5798951-5798970 | Msa0274040:CDS | 35.0% | |
| ! | CAGTTTAATGTGATTGGTTG+AGG | + | chr2_3:5799163-5799182 | Msa0274040:intron | 35.0% |
| ! | TTATAGCATGGCTTTTCATC+AGG | - | chr2_3:5799288-5799307 | None:intergenic | 35.0% |
| ! | ATAGAAGTGACTATGCGTTT+TGG | + | chr2_3:5799307-5799326 | Msa0274040:CDS | 35.0% |
| ! | TAGAAGTGACTATGCGTTTT+GGG | + | chr2_3:5799308-5799327 | Msa0274040:CDS | 35.0% |
| ACATTCTTGTTGCAATGAGA+AGG | - | chr2_3:5799362-5799381 | None:intergenic | 35.0% | |
| ! | ACAAGGTGCTTAATATCCAT+TGG | - | chr2_3:5799417-5799436 | None:intergenic | 35.0% |
| ! | GATAAATACACAAGGCACTT+GGG | - | chr2_3:5798126-5798145 | None:intergenic | 35.0% |
| ! | AGATAAATACACAAGGCACT+TGG | - | chr2_3:5798127-5798146 | None:intergenic | 35.0% |
| GTGCCTTGTGTATTTATCTT+TGG | + | chr2_3:5798128-5798147 | Msa0274040:CDS | 35.0% | |
| ! | AAAGGTGTGAATTATGCATC+TGG | + | chr2_3:5798439-5798458 | Msa0274040:CDS | 35.0% |
| AATTCGAATGGAGACATACT+CGG | + | chr2_3:5798471-5798490 | Msa0274040:CDS | 35.0% | |
| !! | ATGACTTGTTGGGTAGAATT+GGG | - | chr2_3:5798752-5798771 | None:intergenic | 35.0% |
| !! | TATGACTTGTTGGGTAGAAT+TGG | - | chr2_3:5798753-5798772 | None:intergenic | 35.0% |
| !! | GGCTATAAGTATGACTTGTT+GGG | - | chr2_3:5798762-5798781 | None:intergenic | 35.0% |
| GCGAGAAAATATGTGTTAGT+TGG | + | chr2_3:5798951-5798970 | Msa0274040:CDS | 35.0% | |
| ! | CAGTTTAATGTGATTGGTTG+AGG | + | chr2_3:5799163-5799182 | Msa0274040:intron | 35.0% |
| ! | TTATAGCATGGCTTTTCATC+AGG | - | chr2_3:5799288-5799307 | None:intergenic | 35.0% |
| ! | ATAGAAGTGACTATGCGTTT+TGG | + | chr2_3:5799307-5799326 | Msa0274040:CDS | 35.0% |
| ! | TAGAAGTGACTATGCGTTTT+GGG | + | chr2_3:5799308-5799327 | Msa0274040:CDS | 35.0% |
| ACATTCTTGTTGCAATGAGA+AGG | - | chr2_3:5799362-5799381 | None:intergenic | 35.0% | |
| ! | ACAAGGTGCTTAATATCCAT+TGG | - | chr2_3:5799417-5799436 | None:intergenic | 35.0% |
| TGTTTGCAACGATGTGTCAA+TGG | + | chr2_3:5798095-5798114 | Msa0274040:CDS | 40.0% | |
| GTTTGCAACGATGTGTCAAT+GGG | + | chr2_3:5798096-5798115 | Msa0274040:CDS | 40.0% | |
| GGAGACTCTTTATCTGATAG+TGG | + | chr2_3:5798149-5798168 | Msa0274040:CDS | 40.0% | |
| ! | TACATTTTGCAGAGGTAGGA+AGG | - | chr2_3:5798187-5798206 | None:intergenic | 40.0% |
| ATCGGAAAGTCAACTCCATA+AGG | - | chr2_3:5798218-5798237 | None:intergenic | 40.0% | |
| ! | TTATGGAGTTGACTTTCCGA+TGG | + | chr2_3:5798217-5798236 | Msa0274040:CDS | 40.0% |
| ! | TATGGAGTTGACTTTCCGAT+GGG | + | chr2_3:5798218-5798237 | Msa0274040:CDS | 40.0% |
| GAAGTTGAGCTGCAATCAAA+AGG | - | chr2_3:5798363-5798382 | None:intergenic | 40.0% | |
| TTGATTGCAGCTCAACTTCT+TGG | + | chr2_3:5798364-5798383 | Msa0274040:intron | 40.0% | |
| GAACCACTGATGTTTGCAAA+TGG | - | chr2_3:5798409-5798428 | None:intergenic | 40.0% | |
| AGTGGTTCAGACATACTCAA+AGG | + | chr2_3:5798421-5798440 | Msa0274040:CDS | 40.0% | |
| GCTAATAGCATAACCCTGTA+CGG | - | chr2_3:5798581-5798600 | None:intergenic | 40.0% | |
| ACAGGGTTATGCTATTAGCT+TGG | + | chr2_3:5798582-5798601 | Msa0274040:intron | 40.0% | |
| ! | CAGGGTTATGCTATTAGCTT+GGG | + | chr2_3:5798583-5798602 | Msa0274040:intron | 40.0% |
| TCTCAAATTGCTAGCAGACT+TGG | + | chr2_3:5798637-5798656 | Msa0274040:CDS | 40.0% | |
| !! | TGACTTGTTGGGTAGAATTG+GGG | - | chr2_3:5798751-5798770 | None:intergenic | 40.0% |
| ! | GGGCTATAAGTATGACTTGT+TGG | - | chr2_3:5798763-5798782 | None:intergenic | 40.0% |
| ATGTAGAGCCTGGAATCAAA+TGG | - | chr2_3:5798922-5798941 | None:intergenic | 40.0% | |
| CTGCATGTTCAATGAATCTC+AGG | + | chr2_3:5799207-5799226 | Msa0274040:intron | 40.0% | |
| ! | TTCAACCTTGATGGACAACA+AGG | - | chr2_3:5799252-5799271 | None:intergenic | 40.0% |
| TGTTGTCCATCAAGGTTGAA+TGG | + | chr2_3:5799252-5799271 | Msa0274040:CDS | 40.0% | |
| CACAATCCATTCAACCTTGA+TGG | - | chr2_3:5799261-5799280 | None:intergenic | 40.0% | |
| TTCAGGGTTCACTTATCCAA+TGG | + | chr2_3:5799398-5799417 | Msa0274040:CDS | 40.0% | |
| TGTTTGCAACGATGTGTCAA+TGG | + | chr2_3:5798095-5798114 | Msa0274040:CDS | 40.0% | |
| GTTTGCAACGATGTGTCAAT+GGG | + | chr2_3:5798096-5798115 | Msa0274040:CDS | 40.0% | |
| GGAGACTCTTTATCTGATAG+TGG | + | chr2_3:5798149-5798168 | Msa0274040:CDS | 40.0% | |
| ! | TACATTTTGCAGAGGTAGGA+AGG | - | chr2_3:5798187-5798206 | None:intergenic | 40.0% |
| ATCGGAAAGTCAACTCCATA+AGG | - | chr2_3:5798218-5798237 | None:intergenic | 40.0% | |
| ! | TTATGGAGTTGACTTTCCGA+TGG | + | chr2_3:5798217-5798236 | Msa0274040:CDS | 40.0% |
| ! | TATGGAGTTGACTTTCCGAT+GGG | + | chr2_3:5798218-5798237 | Msa0274040:CDS | 40.0% |
| GAAGTTGAGCTGCAATCAAA+AGG | - | chr2_3:5798363-5798382 | None:intergenic | 40.0% | |
| TTGATTGCAGCTCAACTTCT+TGG | + | chr2_3:5798364-5798383 | Msa0274040:intron | 40.0% | |
| GAACCACTGATGTTTGCAAA+TGG | - | chr2_3:5798409-5798428 | None:intergenic | 40.0% | |
| AGTGGTTCAGACATACTCAA+AGG | + | chr2_3:5798421-5798440 | Msa0274040:CDS | 40.0% | |
| GCTAATAGCATAACCCTGTA+CGG | - | chr2_3:5798581-5798600 | None:intergenic | 40.0% | |
| ACAGGGTTATGCTATTAGCT+TGG | + | chr2_3:5798582-5798601 | Msa0274040:intron | 40.0% | |
| ! | CAGGGTTATGCTATTAGCTT+GGG | + | chr2_3:5798583-5798602 | Msa0274040:intron | 40.0% |
| TCTCAAATTGCTAGCAGACT+TGG | + | chr2_3:5798637-5798656 | Msa0274040:CDS | 40.0% | |
| !! | TGACTTGTTGGGTAGAATTG+GGG | - | chr2_3:5798751-5798770 | None:intergenic | 40.0% |
| ! | GGGCTATAAGTATGACTTGT+TGG | - | chr2_3:5798763-5798782 | None:intergenic | 40.0% |
| ATGTAGAGCCTGGAATCAAA+TGG | - | chr2_3:5798922-5798941 | None:intergenic | 40.0% | |
| CTGCATGTTCAATGAATCTC+AGG | + | chr2_3:5799207-5799226 | Msa0274040:intron | 40.0% | |
| ! | TTCAACCTTGATGGACAACA+AGG | - | chr2_3:5799252-5799271 | None:intergenic | 40.0% |
| TGTTGTCCATCAAGGTTGAA+TGG | + | chr2_3:5799252-5799271 | Msa0274040:CDS | 40.0% | |
| CACAATCCATTCAACCTTGA+TGG | - | chr2_3:5799261-5799280 | None:intergenic | 40.0% | |
| TTCAGGGTTCACTTATCCAA+TGG | + | chr2_3:5799398-5799417 | Msa0274040:CDS | 40.0% | |
| ! | CGTTGGTAAATCTTCCGGTT+GGG | - | chr2_3:5798244-5798263 | None:intergenic | 45.0% |
| CCAACCGGAAGATTTACCAA+CGG | + | chr2_3:5798242-5798261 | Msa0274040:CDS | 45.0% | |
| ! | TCGACCGTTGGTAAATCTTC+CGG | - | chr2_3:5798249-5798268 | None:intergenic | 45.0% |
| CCACTGATGTTTGCAAATGG+TGG | - | chr2_3:5798406-5798425 | None:intergenic | 45.0% | |
| CCACCATTTGCAAACATCAG+TGG | + | chr2_3:5798403-5798422 | Msa0274040:CDS | 45.0% | |
| GGTGTGAATTATGCATCTGG+CGG | + | chr2_3:5798442-5798461 | Msa0274040:CDS | 45.0% | |
| AATGGAGACATACTCGGCTA+AGG | + | chr2_3:5798477-5798496 | Msa0274040:CDS | 45.0% | |
| CAAATTGCTAGCAGACTTGG+AGG | + | chr2_3:5798640-5798659 | Msa0274040:CDS | 45.0% | |
| TTCCAGGCTCTACATGACAT+TGG | + | chr2_3:5798927-5798946 | Msa0274040:intron | 45.0% | |
| ! | ATGCTCCTTGTTGTCCATCA+AGG | + | chr2_3:5799244-5799263 | Msa0274040:CDS | 45.0% |
| !! | AATGAGAAGGTACCAAGCCT+CGG | - | chr2_3:5799349-5799368 | None:intergenic | 45.0% |
| AGAGGTGACTCACAGTTAAG+TGG | + | chr2_3:5799669-5799688 | Msa0274040:three_prime_UTR | 45.0% | |
| ! | CGTTGGTAAATCTTCCGGTT+GGG | - | chr2_3:5798244-5798263 | None:intergenic | 45.0% |
| CCAACCGGAAGATTTACCAA+CGG | + | chr2_3:5798242-5798261 | Msa0274040:CDS | 45.0% | |
| ! | TCGACCGTTGGTAAATCTTC+CGG | - | chr2_3:5798249-5798268 | None:intergenic | 45.0% |
| CCACTGATGTTTGCAAATGG+TGG | - | chr2_3:5798406-5798425 | None:intergenic | 45.0% | |
| CCACCATTTGCAAACATCAG+TGG | + | chr2_3:5798403-5798422 | Msa0274040:CDS | 45.0% | |
| GGTGTGAATTATGCATCTGG+CGG | + | chr2_3:5798442-5798461 | Msa0274040:CDS | 45.0% | |
| AATGGAGACATACTCGGCTA+AGG | + | chr2_3:5798477-5798496 | Msa0274040:CDS | 45.0% | |
| CAAATTGCTAGCAGACTTGG+AGG | + | chr2_3:5798640-5798659 | Msa0274040:CDS | 45.0% | |
| TTCCAGGCTCTACATGACAT+TGG | + | chr2_3:5798927-5798946 | Msa0274040:intron | 45.0% | |
| ! | ATGCTCCTTGTTGTCCATCA+AGG | + | chr2_3:5799244-5799263 | Msa0274040:CDS | 45.0% |
| !! | AATGAGAAGGTACCAAGCCT+CGG | - | chr2_3:5799349-5799368 | None:intergenic | 45.0% |
| AGAGGTGACTCACAGTTAAG+TGG | + | chr2_3:5799669-5799688 | Msa0274040:three_prime_UTR | 45.0% | |
| ! | CCGTTGGTAAATCTTCCGGT+TGG | - | chr2_3:5798245-5798264 | None:intergenic | 50.0% |
| AATTATGCATCTGGCGGAGC+TGG | + | chr2_3:5798448-5798467 | Msa0274040:CDS | 50.0% | |
| GAGCTTCTGCATACTGCTCA+GGG | - | chr2_3:5798783-5798802 | None:intergenic | 50.0% | |
| AGAGCTTCTGCATACTGCTC+AGG | - | chr2_3:5798784-5798803 | None:intergenic | 50.0% | |
| CTCCAATGTCATGTAGAGCC+TGG | - | chr2_3:5798932-5798951 | None:intergenic | 50.0% | |
| ! | CCGTTGGTAAATCTTCCGGT+TGG | - | chr2_3:5798245-5798264 | None:intergenic | 50.0% |
| AATTATGCATCTGGCGGAGC+TGG | + | chr2_3:5798448-5798467 | Msa0274040:CDS | 50.0% | |
| GAGCTTCTGCATACTGCTCA+GGG | - | chr2_3:5798783-5798802 | None:intergenic | 50.0% | |
| AGAGCTTCTGCATACTGCTC+AGG | - | chr2_3:5798784-5798803 | None:intergenic | 50.0% | |
| CTCCAATGTCATGTAGAGCC+TGG | - | chr2_3:5798932-5798951 | None:intergenic | 50.0% | |
| AATCTTCCGGTTGGGCCCAT+CGG | - | chr2_3:5798236-5798255 | None:intergenic | 55.0% | |
| GTCAACTGCAGTTCGACCGT+TGG | - | chr2_3:5798261-5798280 | None:intergenic | 55.0% | |
| TGGCGGAGCTGGAATTCGAA+TGG | + | chr2_3:5798459-5798478 | Msa0274040:CDS | 55.0% | |
| GAGTCAGATGCCCTGTCAGA+TGG | + | chr2_3:5799092-5799111 | Msa0274040:CDS | 55.0% | |
| !! | AGAAGGTACCAAGCCTCGGT+GGG | - | chr2_3:5799345-5799364 | None:intergenic | 55.0% |
| AATCTTCCGGTTGGGCCCAT+CGG | - | chr2_3:5798236-5798255 | None:intergenic | 55.0% | |
| GTCAACTGCAGTTCGACCGT+TGG | - | chr2_3:5798261-5798280 | None:intergenic | 55.0% | |
| TGGCGGAGCTGGAATTCGAA+TGG | + | chr2_3:5798459-5798478 | Msa0274040:CDS | 55.0% | |
| GAGTCAGATGCCCTGTCAGA+TGG | + | chr2_3:5799092-5799111 | Msa0274040:CDS | 55.0% | |
| !! | AGAAGGTACCAAGCCTCGGT+GGG | - | chr2_3:5799345-5799364 | None:intergenic | 55.0% |
| GACTTTCCGATGGGCCCAAC+CGG | + | chr2_3:5798227-5798246 | Msa0274040:CDS | 60.0% | |
| GGATGAAGTCCATCCCACCG+AGG | + | chr2_3:5799329-5799348 | Msa0274040:CDS | 60.0% | |
| AAGTCCATCCCACCGAGGCT+TGG | + | chr2_3:5799334-5799353 | Msa0274040:CDS | 60.0% | |
| !! | GAGAAGGTACCAAGCCTCGG+TGG | - | chr2_3:5799346-5799365 | None:intergenic | 60.0% |
| GACTTTCCGATGGGCCCAAC+CGG | + | chr2_3:5798227-5798246 | Msa0274040:CDS | 60.0% | |
| GGATGAAGTCCATCCCACCG+AGG | + | chr2_3:5799329-5799348 | Msa0274040:CDS | 60.0% | |
| AAGTCCATCCCACCGAGGCT+TGG | + | chr2_3:5799334-5799353 | Msa0274040:CDS | 60.0% | |
| !! | GAGAAGGTACCAAGCCTCGG+TGG | - | chr2_3:5799346-5799365 | None:intergenic | 60.0% |
| GGTACCAAGCCTCGGTGGGA+TGG | - | chr2_3:5799341-5799360 | None:intergenic | 65.0% | |
| GGTACCAAGCCTCGGTGGGA+TGG | - | chr2_3:5799341-5799360 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 5797989 | 5799708 | 5797989 | ID=Msa0274040;Name=Msa0274040 |
| chr2_3 | mRNA | 5797989 | 5799708 | 5797989 | ID=Msa0274040-mRNA-1;Parent=Msa0274040;Name=Msa0274040-mRNA-1;_AED=0.23;_eAED=0.23;_QI=49|1|1|1|1|1|5|232|349 |
| chr2_3 | exon | 5797989 | 5798287 | 5797989 | ID=Msa0274040-mRNA-1:exon:2709;Parent=Msa0274040-mRNA-1 |
| chr2_3 | exon | 5798374 | 5798498 | 5798374 | ID=Msa0274040-mRNA-1:exon:2710;Parent=Msa0274040-mRNA-1 |
| chr2_3 | exon | 5798586 | 5798831 | 5798586 | ID=Msa0274040-mRNA-1:exon:2711;Parent=Msa0274040-mRNA-1 |
| chr2_3 | exon | 5798933 | 5799113 | 5798933 | ID=Msa0274040-mRNA-1:exon:2712;Parent=Msa0274040-mRNA-1 |
| chr2_3 | exon | 5799229 | 5799708 | 5799229 | ID=Msa0274040-mRNA-1:exon:2713;Parent=Msa0274040-mRNA-1 |
| chr2_3 | five_prime_UTR | 5797989 | 5798037 | 5797989 | ID=Msa0274040-mRNA-1:five_prime_utr;Parent=Msa0274040-mRNA-1 |
| chr2_3 | CDS | 5798038 | 5798287 | 5798038 | ID=Msa0274040-mRNA-1:cds;Parent=Msa0274040-mRNA-1 |
| chr2_3 | CDS | 5798374 | 5798498 | 5798374 | ID=Msa0274040-mRNA-1:cds;Parent=Msa0274040-mRNA-1 |
| chr2_3 | CDS | 5798586 | 5798831 | 5798586 | ID=Msa0274040-mRNA-1:cds;Parent=Msa0274040-mRNA-1 |
| chr2_3 | CDS | 5798933 | 5799113 | 5798933 | ID=Msa0274040-mRNA-1:cds;Parent=Msa0274040-mRNA-1 |
| chr2_3 | CDS | 5799229 | 5799476 | 5799229 | ID=Msa0274040-mRNA-1:cds;Parent=Msa0274040-mRNA-1 |
| chr2_3 | three_prime_UTR | 5799477 | 5799708 | 5799477 | ID=Msa0274040-mRNA-1:three_prime_utr;Parent=Msa0274040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
