Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316440 | XP_024633060.1 | 98.039 | 510 | 10 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1036 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316440 | sp|O65390|APA1_ARATH | 70.297 | 505 | 146 | 1 | 6 | 510 | 6 | 506 | 0.0 | 751 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0196860 | Msa0316440 | 0.991305 | 6.002916e-187 | -8.615850e-47 |
| Msa0238670 | Msa0316440 | 0.989382 | 7.028414e-178 | -8.615850e-47 |
| Msa0263920 | Msa0316440 | 0.800099 | 1.689349e-48 | -8.615850e-47 |
| Msa0276400 | Msa0316440 | 0.981968 | 6.714398e-154 | -8.615850e-47 |
| Msa0316440 | Msa0464810 | 0.803554 | 3.298446e-49 | -8.615850e-47 |
| Msa0316440 | Msa1435360 | 0.819518 | 1.113579e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316440 | MtrunA17_Chr2g0288851 | 98.039 | 510 | 10 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1036 |
| Msa0316440 | MtrunA17_Chr4g0075181 | 71.511 | 523 | 132 | 4 | 1 | 510 | 1 | 519 | 0.0 | 769 |
| Msa0316440 | MtrunA17_Chr1g0193211 | 58.594 | 512 | 206 | 5 | 1 | 510 | 1 | 508 | 0.0 | 599 |
| Msa0316440 | MtrunA17_Chr7g0271351 | 57.455 | 503 | 208 | 4 | 9 | 510 | 7 | 504 | 0.0 | 586 |
| Msa0316440 | MtrunA17_Chr4g0069631 | 50.395 | 506 | 240 | 2 | 5 | 510 | 3 | 497 | 0.0 | 557 |
| Msa0316440 | MtrunA17_Chr2g0302421 | 49.900 | 501 | 244 | 2 | 13 | 510 | 6 | 502 | 0.0 | 533 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316440 | AT1G11910.1 | 70.297 | 505 | 146 | 1 | 6 | 510 | 6 | 506 | 0.0 | 751 |
| Msa0316440 | AT1G11910.2 | 70.297 | 505 | 146 | 1 | 6 | 510 | 17 | 517 | 0.0 | 750 |
| Msa0316440 | AT1G62290.1 | 68.811 | 513 | 155 | 2 | 1 | 509 | 1 | 512 | 0.0 | 749 |
| Msa0316440 | AT1G62290.2 | 68.811 | 513 | 155 | 2 | 1 | 509 | 1 | 512 | 0.0 | 749 |
| Msa0316440 | AT1G62290.5 | 68.378 | 487 | 149 | 2 | 1 | 483 | 1 | 486 | 0.0 | 704 |
| Msa0316440 | AT4G04460.1 | 65.504 | 516 | 164 | 6 | 1 | 510 | 1 | 508 | 0.0 | 694 |
| Msa0316440 | AT4G04460.2 | 65.116 | 516 | 162 | 7 | 1 | 510 | 1 | 504 | 0.0 | 684 |
| Msa0316440 | AT1G62290.6 | 67.396 | 457 | 144 | 2 | 1 | 453 | 1 | 456 | 0.0 | 645 |
| Msa0316440 | AT1G62290.4 | 67.396 | 457 | 144 | 2 | 1 | 453 | 1 | 456 | 0.0 | 645 |
| Msa0316440 | AT1G62290.3 | 67.225 | 418 | 132 | 2 | 1 | 414 | 1 | 417 | 0.0 | 586 |
| Msa0316440 | AT4G22050.1 | 45.492 | 244 | 125 | 6 | 74 | 313 | 34 | 273 | 1.68e-55 | 190 |
| Msa0316440 | AT1G69100.2 | 39.919 | 248 | 139 | 7 | 77 | 316 | 46 | 291 | 9.59e-51 | 178 |
| Msa0316440 | AT1G69100.1 | 39.919 | 248 | 139 | 7 | 77 | 316 | 38 | 283 | 1.04e-50 | 177 |
Find 164 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGTACTGGGGCAGTTTC+TGG | 0.072775 | 2_4:-13584251 | Msa0316440:CDS |
| ATTTGAAATTATACCTCTTC+TGG | 0.170940 | 2_4:+13582255 | None:intergenic |
| TTTGGATGAACAGGTGAAAA+TGG | 0.221272 | 2_4:-13585064 | Msa0316440:intron |
| CTTGGAACCATACTTCTTAA+TGG | 0.236719 | 2_4:+13584876 | None:intergenic |
| GTGTGGCCTGTGGCCATTAT+TGG | 0.248082 | 2_4:-13581269 | Msa0316440:three_prime_UTR |
| CAAATGTGCACAGCCCAATT+TGG | 0.251367 | 2_4:+13582919 | None:intergenic |
| AGAGATTAATTACCGAGAAT+TGG | 0.296317 | 2_4:+13585969 | None:intergenic |
| TCACCTCCTTGCTCCTCATT+TGG | 0.306254 | 2_4:+13583817 | None:intergenic |
| TTGTATGCATTTAGAGTTAT+GGG | 0.312314 | 2_4:-13581295 | Msa0316440:three_prime_UTR |
| AAGAAACCAAAGAAAACAAT+AGG | 0.321446 | 2_4:+13584998 | None:intergenic |
| TGGTCTTCCATTAAGAAGTA+TGG | 0.324456 | 2_4:-13584883 | Msa0316440:CDS |
| CATTAGTGGCTTTACTGCTT+TGG | 0.330010 | 2_4:-13582022 | Msa0316440:CDS |
| TATCATACAGTCTTTGACTA+TGG | 0.334757 | 2_4:-13581584 | Msa0316440:CDS |
| AGCTCCTCCAAGGATGTTCT+TGG | 0.335186 | 2_4:+13584858 | None:intergenic |
| AATTACCGAGAATTGGATTA+TGG | 0.335334 | 2_4:+13585976 | None:intergenic |
| TTTCTGCCACAGGTACAAAA+TGG | 0.338479 | 2_4:-13583893 | Msa0316440:intron |
| CTGTTTGATTCTGCTTCAGC+TGG | 0.343565 | 2_4:+13582498 | None:intergenic |
| TGTGGCCTGTGGCCATTATT+GGG | 0.343786 | 2_4:-13581268 | Msa0316440:three_prime_UTR |
| CTCTAAATGCATACAATAGC+TGG | 0.344697 | 2_4:+13581302 | None:intergenic |
| CTCTTCCATAATCCAATTCT+CGG | 0.351044 | 2_4:-13585981 | Msa0316440:intron |
| GAGAATGAGAAGAAAGGGTT+TGG | 0.358317 | 2_4:+13586013 | None:intergenic |
| AACAAACTACTGGCAAATAA+AGG | 0.373039 | 2_4:+13581513 | None:intergenic |
| AACCAAGCAATTGGAGCATC+TGG | 0.373746 | 2_4:-13583230 | Msa0316440:CDS |
| TGTTGATCCTGCTCACTTCA+AGG | 0.379733 | 2_4:-13583779 | Msa0316440:CDS |
| TTGGAAATGCTGTCCCAATA+TGG | 0.383429 | 2_4:-13583996 | Msa0316440:intron |
| ATCAGTTAAATGTTACTTCT+CGG | 0.383576 | 2_4:-13584707 | Msa0316440:intron |
| GGGTTTGAGAGAGAATTTAA+AGG | 0.390340 | 2_4:+13586034 | None:intergenic |
| ATTGTATGCATTTAGAGTTA+TGG | 0.391763 | 2_4:-13581296 | Msa0316440:three_prime_UTR |
| AAAAGGTCTGCTCCCAAATT+GGG | 0.392569 | 2_4:-13582932 | Msa0316440:CDS |
| TTTGATGGTTTGCTTGGACT+TGG | 0.393686 | 2_4:-13584036 | Msa0316440:CDS |
| TACTTGGATGCTCAGTACTA+TGG | 0.395769 | 2_4:-13584805 | Msa0316440:CDS |
| AGACAAACCATTTGGCTTGT+AGG | 0.400295 | 2_4:+13584537 | None:intergenic |
| TATGCGAGATGGCTGTTGTC+TGG | 0.401356 | 2_4:-13582529 | Msa0316440:CDS |
| TTGATGGCACTCATGGTGTT+AGG | 0.401957 | 2_4:-13582899 | Msa0316440:intron |
| TTTGTCGCGGCTAAGTTTGA+TGG | 0.405170 | 2_4:-13584051 | Msa0316440:CDS |
| TTTGAAATTATACCTCTTCT+GGG | 0.407540 | 2_4:+13582256 | None:intergenic |
| GTTTCTTGTGTACCAAATGA+TGG | 0.409083 | 2_4:-13584982 | Msa0316440:CDS |
| TACGTGCCTGTGACGCGAAA+AGG | 0.413351 | 2_4:-13583745 | Msa0316440:CDS |
| AAATGTGCACAGCCCAATTT+GGG | 0.415023 | 2_4:+13582920 | None:intergenic |
| AAGAACATCCTTGGAGGAGC+TGG | 0.416218 | 2_4:-13584856 | Msa0316440:CDS |
| ATCCTACGCAACCCATCATT+TGG | 0.424565 | 2_4:+13584970 | None:intergenic |
| CTTTATAAATGCAGGATCCT+TGG | 0.426317 | 2_4:-13581626 | Msa0316440:intron |
| AGAATGAGAAGAAAGGGTTT+GGG | 0.432893 | 2_4:+13586014 | None:intergenic |
| ATTGGGCTGTGCACATTTGA+TGG | 0.433145 | 2_4:-13582915 | Msa0316440:CDS |
| TTGGATGAACAGGTGAAAAT+GGG | 0.433924 | 2_4:-13585063 | Msa0316440:intron |
| GCTAAGTTTGATGGTTTGCT+TGG | 0.435069 | 2_4:-13584042 | Msa0316440:CDS |
| GATAATAAACTACGCCGATT+CGG | 0.436523 | 2_4:-13582468 | Msa0316440:intron |
| TTAATATAGAGACCCAATAA+TGG | 0.438469 | 2_4:+13581256 | None:intergenic |
| AGGCAAACCCAAACGCGAAA+TGG | 0.438696 | 2_4:+13586054 | None:intergenic |
| AGGACTGTTGTTGATCAATA+TGG | 0.438787 | 2_4:-13583188 | Msa0316440:CDS |
| ACTATGATAAACCAAGCAAT+TGG | 0.441944 | 2_4:-13583239 | Msa0316440:CDS |
| TGAACAAACAAGAAATATCA+TGG | 0.442194 | 2_4:-13581467 | Msa0316440:three_prime_UTR |
| CTCCAGATGCTCCAATTGCT+TGG | 0.442375 | 2_4:+13583228 | None:intergenic |
| GACAAAATGCCTAACCCATT+GGG | 0.442813 | 2_4:-13582360 | Msa0316440:CDS |
| ATATACACAACCACAACTTT+AGG | 0.444139 | 2_4:+13581365 | None:intergenic |
| CTTTCTTCAGTACATATTGA+AGG | 0.445847 | 2_4:-13582070 | Msa0316440:intron |
| CTGTGACGCGAAAAGGATAT+TGG | 0.451124 | 2_4:-13583738 | Msa0316440:CDS |
| GCTGCAATTCAGTATGGTAC+TGG | 0.451607 | 2_4:-13584263 | Msa0316440:CDS |
| TGAATTGAGAATGAGAAGAA+AGG | 0.453521 | 2_4:+13586007 | None:intergenic |
| AGACTCAGGGACGTCTTTGT+TGG | 0.458656 | 2_4:-13583431 | Msa0316440:CDS |
| TTGTTGGGGTCGAAGGGTTG+TGG | 0.460294 | 2_4:-13584913 | Msa0316440:CDS |
| ATGTGCACAGATACCATATT+GGG | 0.461759 | 2_4:+13583983 | None:intergenic |
| AAAGTTTCCTTCACCATTGG+TGG | 0.463805 | 2_4:-13582297 | Msa0316440:CDS |
| TGTTGCATTGAAGAATTACT+TGG | 0.466682 | 2_4:-13584821 | Msa0316440:CDS |
| CTCCTCCACGTGGCCCACTC+TGG | 0.467933 | 2_4:-13581993 | Msa0316440:intron |
| TGGTGTTAAGTTTGTGCTTG+TGG | 0.468093 | 2_4:-13585023 | Msa0316440:CDS |
| CTGCAATTCAGTATGGTACT+GGG | 0.469653 | 2_4:-13584262 | Msa0316440:CDS |
| GGTTAAACAAGGTCTTGTTA+AGG | 0.471257 | 2_4:-13583872 | Msa0316440:CDS |
| GAATTGAGAATGAGAAGAAA+GGG | 0.472708 | 2_4:+13586008 | None:intergenic |
| ATGGGAGATGTACTTATTGA+TGG | 0.474879 | 2_4:-13583605 | Msa0316440:CDS |
| CCTAAAGTTTCCTTCACCAT+TGG | 0.475640 | 2_4:-13582300 | Msa0316440:CDS |
| ACTCATGCTGCAATTCAGTA+TGG | 0.476846 | 2_4:-13584269 | Msa0316440:CDS |
| TGACAAAATGCCTAACCCAT+TGG | 0.477180 | 2_4:-13582361 | Msa0316440:CDS |
| TTGAGCCAAAATGAAAATAC+AGG | 0.478978 | 2_4:+13583847 | None:intergenic |
| AATGATGGGTTGCGTAGGAT+TGG | 0.479080 | 2_4:-13584967 | Msa0316440:CDS |
| GCTGCAGCCCAATGCATTAG+TGG | 0.479385 | 2_4:-13582036 | Msa0316440:CDS |
| AGCTACGACAATGTAAAAGT+TGG | 0.480154 | 2_4:-13584221 | Msa0316440:CDS |
| GATGATTGTCCCAATGGGTT+AGG | 0.482537 | 2_4:+13582351 | None:intergenic |
| GATCCTTGGAGATATCTTCA+TGG | 0.488764 | 2_4:-13581612 | Msa0316440:CDS |
| AATGTGCACAGATACCATAT+TGG | 0.492384 | 2_4:+13583982 | None:intergenic |
| GACTATGGTAAACTCAGAGT+TGG | 0.498049 | 2_4:-13581569 | Msa0316440:CDS |
| AGTAAAGCCACTAATGCATT+GGG | 0.502172 | 2_4:+13582029 | None:intergenic |
| TATGGTTCCAAGAACATCCT+TGG | 0.504781 | 2_4:-13584865 | Msa0316440:CDS |
| TCAGGGACGTCTTTGTTGGC+AGG | 0.505869 | 2_4:-13583427 | Msa0316440:CDS |
| GTCTTTGTTGGCAGGTCCAA+CGG | 0.508348 | 2_4:-13583419 | Msa0316440:intron |
| TGCACATTTGATGGCACTCA+TGG | 0.508356 | 2_4:-13582906 | Msa0316440:CDS |
| TCTAAATGCATACAATAGCT+GGG | 0.508551 | 2_4:+13581303 | None:intergenic |
| GAATATTCTCTATGCTGCTT+CGG | 0.515448 | 2_4:+13581541 | None:intergenic |
| GGATTTCAAGAGATATCAGT+TGG | 0.516373 | 2_4:-13584015 | Msa0316440:CDS |
| TTGGCTTGTAGGTACTTGAC+TGG | 0.518956 | 2_4:+13584548 | None:intergenic |
| CGGTCTGTTCCACCACACTC+TGG | 0.522135 | 2_4:+13582594 | None:intergenic |
| CAGTAAAGCCACTAATGCAT+TGG | 0.522571 | 2_4:+13582028 | None:intergenic |
| CAACAGATGATTGTCCCAAT+GGG | 0.523924 | 2_4:+13582346 | None:intergenic |
| GTTGATCCTGCTCACTTCAA+GGG | 0.527930 | 2_4:-13583778 | Msa0316440:CDS |
| TCTTCAGTACATATTGAAGG+TGG | 0.529391 | 2_4:-13582067 | Msa0316440:intron |
| ATCCTTGGAGATATCTTCAT+GGG | 0.531315 | 2_4:-13581611 | Msa0316440:CDS |
| GCCGCGACAAATGTAAGTCC+AGG | 0.533163 | 2_4:+13584063 | None:intergenic |
| AGAAACCAAAGAAAACAATA+GGG | 0.536435 | 2_4:+13584999 | None:intergenic |
| TCAACAGATGATTGTCCCAA+TGG | 0.536746 | 2_4:+13582345 | None:intergenic |
| TGTTCGCCCTTGAAGTGAGC+AGG | 0.537690 | 2_4:+13583772 | None:intergenic |
| TACTGGTAGCTCTAATACCT+GGG | 0.537864 | 2_4:-13584734 | Msa0316440:CDS |
| CCAATGGTGAAGGAAACTTT+AGG | 0.538511 | 2_4:+13582300 | None:intergenic |
| TTTCTTGTGTACCAAATGAT+GGG | 0.539047 | 2_4:-13584981 | Msa0316440:CDS |
| ATACTGGTAGCTCTAATACC+TGG | 0.544445 | 2_4:-13584735 | Msa0316440:CDS |
| CAGAGTGGGCCACGTGGAGG+AGG | 0.544746 | 2_4:+13581994 | None:intergenic |
| TTGAAACTAAAGTACCGAAT+CGG | 0.544906 | 2_4:+13582454 | None:intergenic |
| CTTCAGTACATATTGAAGGT+GGG | 0.547423 | 2_4:-13582066 | Msa0316440:intron |
| TCAAGTACCTACAAGCCAAA+TGG | 0.548903 | 2_4:-13584544 | Msa0316440:intron |
| ATTGAAGCGACTAGAGAGCC+TGG | 0.549120 | 2_4:-13584081 | Msa0316440:CDS |
| TACTATGGTGAAATATCCAT+TGG | 0.551083 | 2_4:-13584790 | Msa0316440:CDS |
| TACATATTGAAGGTGGGTGA+AGG | 0.551930 | 2_4:-13582060 | Msa0316440:CDS |
| ATTTGACCTTGCCCCAGAAG+AGG | 0.561464 | 2_4:-13582268 | Msa0316440:intron |
| TGTTCAGCAATAGCAGACTC+AGG | 0.564304 | 2_4:-13583445 | Msa0316440:CDS |
| AAACTTTGATGTACCAGAGT+GGG | 0.565063 | 2_4:+13581980 | None:intergenic |
| GGCTAGACTTGTACTTAGCA+TGG | 0.565504 | 2_4:+13584569 | None:intergenic |
| GGTGAAGGAAACTTTAGGCA+TGG | 0.568347 | 2_4:+13582305 | None:intergenic |
| CAGCTTCTCCAGCTCCTCCA+AGG | 0.571220 | 2_4:+13584848 | None:intergenic |
| GAGTTTACAGTCAAGAATGC+AGG | 0.573602 | 2_4:-13583208 | Msa0316440:CDS |
| CTTATTGATGGAAAACCCAC+TGG | 0.573688 | 2_4:-13583593 | Msa0316440:intron |
| GACGCGAAAAGGATATTGGC+AGG | 0.577867 | 2_4:-13583734 | Msa0316440:intron |
| TTTAGAGTTATGGGCTTGTG+TGG | 0.578727 | 2_4:-13581286 | Msa0316440:three_prime_UTR |
| CGAAGGGTTGTGGATCATCA+TGG | 0.583877 | 2_4:-13584903 | Msa0316440:CDS |
| ATTATACCTCTTCTGGGGCA+AGG | 0.592540 | 2_4:+13582262 | None:intergenic |
| TCAAAATGAGCCTAAAGTTG+TGG | 0.594099 | 2_4:-13581375 | Msa0316440:three_prime_UTR |
| GCCTGGACTTACATTTGTCG+CGG | 0.598101 | 2_4:-13584064 | Msa0316440:CDS |
| GAACAAACAAGAAATATCAT+GGG | 0.602198 | 2_4:-13581466 | Msa0316440:three_prime_UTR |
| GAGAAGTAACATTTAACTGA+TGG | 0.604372 | 2_4:+13584709 | None:intergenic |
| AGTTGGCGATGTAGTTGTGA+AGG | 0.604962 | 2_4:-13584204 | Msa0316440:CDS |
| CTAAATGCATACAATAGCTG+GGG | 0.605313 | 2_4:+13581304 | None:intergenic |
| GGTTCCAAGAACATCCTTGG+AGG | 0.606106 | 2_4:-13584862 | Msa0316440:CDS |
| AGAGACCCAATAATGGCCAC+AGG | 0.613386 | 2_4:+13581263 | None:intergenic |
| AGTAGCATCTTGATGACCAC+CGG | 0.613662 | 2_4:+13582559 | None:intergenic |
| GCTCAATCGTAATCCAAATG+AGG | 0.614784 | 2_4:-13583830 | Msa0316440:CDS |
| TAAGCCTCAGTAATTGACAT+TGG | 0.616091 | 2_4:-13581438 | Msa0316440:three_prime_UTR |
| TAGTATGGGTATCCAGAGTG+TGG | 0.620668 | 2_4:-13582606 | Msa0316440:CDS |
| AGTCTGAGGAGGAGTACCAA+TGG | 0.621304 | 2_4:+13584774 | None:intergenic |
| CGTAATCCAAATGAGGAGCA+AGG | 0.621432 | 2_4:-13583823 | Msa0316440:CDS |
| AAAATCACAGTAAAAGTCTG+AGG | 0.621645 | 2_4:+13584760 | None:intergenic |
| TTGAAATTATACCTCTTCTG+GGG | 0.624603 | 2_4:+13582257 | None:intergenic |
| TACTTGTTCTGTATGCGAGA+TGG | 0.625056 | 2_4:-13582540 | Msa0316440:CDS |
| ACCACCGGATGATACTCTAT+CGG | 0.633965 | 2_4:+13582574 | None:intergenic |
| TTATGGGCTTGTGTGGCCTG+TGG | 0.634449 | 2_4:-13581279 | Msa0316440:three_prime_UTR |
| CAGACCGATAGAGTATCATC+CGG | 0.638815 | 2_4:-13582578 | Msa0316440:CDS |
| TTGGATGTTCCTCCTCCACG+TGG | 0.643322 | 2_4:-13582003 | Msa0316440:CDS |
| TATGGGTATCCAGAGTGTGG+TGG | 0.643466 | 2_4:-13582603 | Msa0316440:CDS |
| ATCACAGTAAAAGTCTGAGG+AGG | 0.651253 | 2_4:+13584763 | None:intergenic |
| GTTGCCAATGTCAATTACTG+AGG | 0.656707 | 2_4:+13581434 | None:intergenic |
| TACCAGAGTGGGCCACGTGG+AGG | 0.657844 | 2_4:+13581991 | None:intergenic |
| GCCCCATGAAGATATCTCCA+AGG | 0.660008 | 2_4:+13581609 | None:intergenic |
| GTTCAGCAATAGCAGACTCA+GGG | 0.660883 | 2_4:-13583444 | Msa0316440:CDS |
| ACATTTAACTGATGGCACCC+AGG | 0.661281 | 2_4:+13584717 | None:intergenic |
| CGATGTAGTTGTGAAGGACG+TGG | 0.664182 | 2_4:-13584198 | Msa0316440:intron |
| AGCAGAATCAAACAGAAGAG+CGG | 0.677190 | 2_4:-13582490 | Msa0316440:CDS |
| AGGTACAAAATGGTTAAACA+AGG | 0.677888 | 2_4:-13583883 | Msa0316440:CDS |
| TGCAATTCAGTATGGTACTG+GGG | 0.680583 | 2_4:-13584261 | Msa0316440:CDS |
| TAAACTTTGATGTACCAGAG+TGG | 0.684226 | 2_4:+13581979 | None:intergenic |
| AATGGGAAACAAGTTGAATG+TGG | 0.690214 | 2_4:-13585046 | Msa0316440:CDS |
| ACCGATAGAGTATCATCCGG+TGG | 0.695201 | 2_4:-13582575 | Msa0316440:CDS |
| GGGAAACAAGTTGAATGTGG+TGG | 0.697113 | 2_4:-13585043 | Msa0316440:CDS |
| ATGTACCAGAGTGGGCCACG+TGG | 0.705272 | 2_4:+13581988 | None:intergenic |
| TCCTTGGAGATATCTTCATG+GGG | 0.706349 | 2_4:-13581610 | Msa0316440:CDS |
| TAAATGCATACAATAGCTGG+GGG | 0.714986 | 2_4:+13581305 | None:intergenic |
| TACCAAATGATGGGTTGCGT+AGG | 0.717424 | 2_4:-13584972 | Msa0316440:CDS |
| AATCCAAATGAGGAGCAAGG+AGG | 0.761109 | 2_4:-13583820 | Msa0316440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAAAAATAAAAAAAA+AGG | + | chr2_4:13581311-13581330 | None:intergenic | 0.0% |
| !! | ATTTAAAAAATAAATAAGGA+AGG | - | chr2_4:13585372-13585391 | Msa0316440:intron | 10.0% |
| !!! | TAGATAAAACTTTGAAAAAT+TGG | + | chr2_4:13581832-13581851 | None:intergenic | 15.0% |
| !!! | ATTTTTCAAAGTTTTATCTA+TGG | - | chr2_4:13581832-13581851 | Msa0316440:intron | 15.0% |
| !! | TAAGAATAAAAACTATTCAA+TGG | + | chr2_4:13582068-13582087 | None:intergenic | 15.0% |
| !!! | ATTTATTTATATTCCGATTT+TGG | - | chr2_4:13582599-13582618 | Msa0316440:CDS | 15.0% |
| !!! | TATATTTTTTTATTTCCTTC+AGG | - | chr2_4:13583128-13583147 | Msa0316440:intron | 15.0% |
| !! | CAATGAAAGATTTAATAAAA+TGG | + | chr2_4:13584604-13584623 | None:intergenic | 15.0% |
| !!! | TCTTTTATTGTACATTCTTT+TGG | - | chr2_4:13581371-13581390 | Msa0316440:three_prime_UTR | 20.0% |
| !!! | AATTTGATTAATGCGTTTTA+TGG | - | chr2_4:13581402-13581421 | Msa0316440:three_prime_UTR | 20.0% |
| !!! | ATTTGATTAATGCGTTTTAT+GGG | - | chr2_4:13581403-13581422 | Msa0316440:three_prime_UTR | 20.0% |
| !!! | TCAGAATCAATTTTGATTTA+AGG | + | chr2_4:13581556-13581575 | None:intergenic | 20.0% |
| !!! | AATATGAATTTTGACTTGTT+TGG | - | chr2_4:13581582-13581601 | Msa0316440:CDS | 20.0% |
| !! | TGTAAAATTGATTATGACAT+AGG | + | chr2_4:13581888-13581907 | None:intergenic | 20.0% |
| !! | TCAGAAATAAAAATCTATAG+CGG | + | chr2_4:13583870-13583889 | None:intergenic | 20.0% |
| !! | TTATTCTTTCAAATTATGAC+CGG | + | chr2_4:13584462-13584481 | None:intergenic | 20.0% |
| !!! | ATCTATATTTACTTTTGAGA+AGG | - | chr2_4:13585003-13585022 | Msa0316440:CDS | 20.0% |
| !! | TTCTTCATGAAAATAAAACA+CGG | + | chr2_4:13585045-13585064 | None:intergenic | 20.0% |
| !!! | GTGTTTTTGTTTTCTTTTTT+GGG | + | chr2_4:13585553-13585572 | None:intergenic | 20.0% |
| !!! | TGTGTTTTTGTTTTCTTTTT+TGG | + | chr2_4:13585554-13585573 | None:intergenic | 20.0% |
| !!! | GTTTGATAATAATCACTTAA+TGG | - | chr2_4:13585585-13585604 | Msa0316440:intron | 20.0% |
| ! | AAATTTAATGCATGTGTGTT+TGG | - | chr2_4:13581430-13581449 | Msa0316440:three_prime_UTR | 25.0% |
| ! | AATTTAATGCATGTGTGTTT+GGG | - | chr2_4:13581431-13581450 | Msa0316440:three_prime_UTR | 25.0% |
| !! | TAAAGTTGAAATTTTGTCTG+AGG | - | chr2_4:13582137-13582156 | Msa0316440:intron | 25.0% |
| ! | AGAAACCAAAGAAAACAATA+GGG | + | chr2_4:13582241-13582260 | None:intergenic | 25.0% |
| ! | AAGAAACCAAAGAAAACAAT+AGG | + | chr2_4:13582242-13582261 | None:intergenic | 25.0% |
| ! | TGGTTTGAAAAAGAACAAAT+TGG | - | chr2_4:13582290-13582309 | Msa0316440:CDS | 25.0% |
| !! | ATCAGTTAAATGTTACTTCT+CGG | - | chr2_4:13582530-13582549 | Msa0316440:CDS | 25.0% |
| ! | ACATGAAATGAAACAAACAA+AGG | + | chr2_4:13582751-13582770 | None:intergenic | 25.0% |
| !! | GTTTCTGACATTTTGTAATT+TGG | - | chr2_4:13582833-13582852 | Msa0316440:intron | 25.0% |
| !! | TGACATTTTGTAATTTGGTT+TGG | - | chr2_4:13582838-13582857 | Msa0316440:intron | 25.0% |
| !!! | TAATTTGGTTTGGAATAACA+CGG | - | chr2_4:13582848-13582867 | Msa0316440:intron | 25.0% |
| !!! | AGAGTTTGTCTTGTTATTTA+GGG | - | chr2_4:13582945-13582964 | Msa0316440:CDS | 25.0% |
| !! | CTAAGTTCATTTGTATTTTC+TGG | - | chr2_4:13583599-13583618 | Msa0316440:CDS | 25.0% |
| ! | ACAAACAAATATTTACCAGT+GGG | + | chr2_4:13583662-13583681 | None:intergenic | 25.0% |
| ! | AACAAACAAATATTTACCAG+TGG | + | chr2_4:13583663-13583682 | None:intergenic | 25.0% |
| ! | GAATAAATGCTTGAAGATTT+AGG | - | chr2_4:13583844-13583863 | Msa0316440:CDS | 25.0% |
| ! | AAGCATTATTAATTCTTTCC+AGG | + | chr2_4:13583906-13583925 | None:intergenic | 25.0% |
| ! | CAAGCAAAAACAAGTATATT+AGG | + | chr2_4:13583964-13583983 | None:intergenic | 25.0% |
| !! | TTGACTGTTGAATTTTCTTA+TGG | - | chr2_4:13584253-13584272 | Msa0316440:CDS | 25.0% |
| !! | ATTTTCTTATGGTTTTCACT+TGG | - | chr2_4:13584264-13584283 | Msa0316440:CDS | 25.0% |
| ! | AAGTTAACAATGGAATCTTT+GGG | + | chr2_4:13584369-13584388 | None:intergenic | 25.0% |
| !! | TTTGAAATTATACCTCTTCT+GGG | + | chr2_4:13584984-13585003 | None:intergenic | 25.0% |
| !! | ATTTGAAATTATACCTCTTC+TGG | + | chr2_4:13584985-13585004 | None:intergenic | 25.0% |
| ! | AAATTTAACCAGATTGAACT+GGG | + | chr2_4:13585417-13585436 | None:intergenic | 25.0% |
| ! | TAAATTTAACCAGATTGAAC+TGG | + | chr2_4:13585418-13585437 | None:intergenic | 25.0% |
| ! | AATGGTATCTTTATAAATGC+AGG | - | chr2_4:13585603-13585622 | Msa0316440:intron | 25.0% |
| ! | TGAACAAACAAGAAATATCA+TGG | - | chr2_4:13585770-13585789 | Msa0316440:intron | 25.0% |
| ! | GAACAAACAAGAAATATCAT+GGG | - | chr2_4:13585771-13585790 | Msa0316440:intron | 25.0% |
| !! | ATTGTATGCATTTAGAGTTA+TGG | - | chr2_4:13585941-13585960 | Msa0316440:intron | 25.0% |
| !! | TTGTATGCATTTAGAGTTAT+GGG | - | chr2_4:13585942-13585961 | Msa0316440:intron | 25.0% |
| ! | TTAATATAGAGACCCAATAA+TGG | + | chr2_4:13585984-13586003 | None:intergenic | 25.0% |
| !! | TCGTTTTCAATAAGAAAACA+TGG | + | chr2_4:13586078-13586097 | None:intergenic | 25.0% |
| AAAAAGAAACTGTATTGCGT+TGG | + | chr2_4:13581159-13581178 | None:intergenic | 30.0% | |
| GAATTGAGAATGAGAAGAAA+GGG | + | chr2_4:13581232-13581251 | None:intergenic | 30.0% | |
| TGAATTGAGAATGAGAAGAA+AGG | + | chr2_4:13581233-13581252 | None:intergenic | 30.0% | |
| AATTACCGAGAATTGGATTA+TGG | + | chr2_4:13581264-13581283 | None:intergenic | 30.0% | |
| AGAGATTAATTACCGAGAAT+TGG | + | chr2_4:13581271-13581290 | None:intergenic | 30.0% | |
| ATAATATTGCATGCATTGCT+TGG | - | chr2_4:13581341-13581360 | Msa0316440:three_prime_UTR | 30.0% | |
| ATTTAATGCATGTGTGTTTG+GGG | - | chr2_4:13581432-13581451 | Msa0316440:three_prime_UTR | 30.0% | |
| !! | AACAAGTTTTGATGTGACAT+AGG | + | chr2_4:13581532-13581551 | None:intergenic | 30.0% |
| !! | GAATTTGAAGCTTTTGATTC+TGG | - | chr2_4:13581656-13581675 | Msa0316440:intron | 30.0% |
| TTAATTGAATGTACATGCGT+TGG | + | chr2_4:13581808-13581827 | None:intergenic | 30.0% | |
| TTACATGGACAATCTTAGTA+TGG | + | chr2_4:13581939-13581958 | None:intergenic | 30.0% | |
| AGGTCATAATCAATTTCTGT+TGG | - | chr2_4:13582014-13582033 | Msa0316440:CDS | 30.0% | |
| !! | TTTTGTCTGAGGTTGAATTT+TGG | - | chr2_4:13582148-13582167 | Msa0316440:intron | 30.0% |
| !!! | TGAGGTTGAATTTTGGAATT+TGG | - | chr2_4:13582155-13582174 | Msa0316440:intron | 30.0% |
| !!! | ATTTTGGAATTTGGATGAAC+AGG | - | chr2_4:13582164-13582183 | Msa0316440:intron | 30.0% |
| TTTCTTGTGTACCAAATGAT+GGG | - | chr2_4:13582256-13582275 | Msa0316440:intron | 30.0% | |
| TGTTGCATTGAAGAATTACT+TGG | - | chr2_4:13582416-13582435 | Msa0316440:intron | 30.0% | |
| TACTATGGTGAAATATCCAT+TGG | - | chr2_4:13582447-13582466 | Msa0316440:intron | 30.0% | |
| AAAATCACAGTAAAAGTCTG+AGG | + | chr2_4:13582480-13582499 | None:intergenic | 30.0% | |
| ! | TTTACTGTGATTTTCGATAC+TGG | - | chr2_4:13582486-13582505 | Msa0316440:CDS | 30.0% |
| GAGAAGTAACATTTAACTGA+TGG | + | chr2_4:13582531-13582550 | None:intergenic | 30.0% | |
| CCAGATACATATTCATCATA+TGG | + | chr2_4:13582572-13582591 | None:intergenic | 30.0% | |
| CCATATGATGAATATGTATC+TGG | - | chr2_4:13582569-13582588 | Msa0316440:CDS | 30.0% | |
| CACATTAACAAAGCCAAAAT+CGG | + | chr2_4:13582615-13582634 | None:intergenic | 30.0% | |
| !!! | TCTTCTTCCTTTGTTTTTTG+AGG | - | chr2_4:13582720-13582739 | Msa0316440:intron | 30.0% |
| !! | GAGAGTTTGTCTTGTTATTT+AGG | - | chr2_4:13582944-13582963 | Msa0316440:CDS | 30.0% |
| TCAACATATTATTCGTCTGA+AGG | + | chr2_4:13583095-13583114 | None:intergenic | 30.0% | |
| AAATACCTCCTAATGAGTAA+TGG | + | chr2_4:13583325-13583344 | None:intergenic | 30.0% | |
| AGGTACAAAATGGTTAAACA+AGG | - | chr2_4:13583354-13583373 | Msa0316440:intron | 30.0% | |
| ! | AGGATCCTGTATTTTCATTT+TGG | - | chr2_4:13583385-13583404 | Msa0316440:intron | 30.0% |
| TTGAGCCAAAATGAAAATAC+AGG | + | chr2_4:13583393-13583412 | None:intergenic | 30.0% | |
| !! | ATTTTCTGGATAGTTTGCAA+TGG | - | chr2_4:13583613-13583632 | Msa0316440:CDS | 30.0% |
| !! | TTTTCTGGATAGTTTGCAAT+GGG | - | chr2_4:13583614-13583633 | Msa0316440:CDS | 30.0% |
| TTCAAAATACTTCGTCATTC+AGG | - | chr2_4:13583753-13583772 | Msa0316440:CDS | 30.0% | |
| ACTATGATAAACCAAGCAAT+TGG | - | chr2_4:13583998-13584017 | Msa0316440:CDS | 30.0% | |
| GTAAATTACTCTCCATAGTT+TGG | - | chr2_4:13584107-13584126 | Msa0316440:intron | 30.0% | |
| CAAGTTAACAATGGAATCTT+TGG | + | chr2_4:13584370-13584389 | None:intergenic | 30.0% | |
| !!! | TAGGGTTTTCAAGTTAACAA+TGG | + | chr2_4:13584379-13584398 | None:intergenic | 30.0% |
| CTTGAAAATAAATGCATGTC+CGG | + | chr2_4:13584546-13584565 | None:intergenic | 30.0% | |
| TTTCATTGTTTCCTCTAGTA+TGG | - | chr2_4:13584616-13584635 | Msa0316440:intron | 30.0% | |
| TTCATTGTTTCCTCTAGTAT+GGG | - | chr2_4:13584617-13584636 | Msa0316440:intron | 30.0% | |
| !! | TTGAAACTAAAGTACCGAAT+CGG | + | chr2_4:13584786-13584805 | None:intergenic | 30.0% |
| TTGAAATTATACCTCTTCTG+GGG | + | chr2_4:13584983-13585002 | None:intergenic | 30.0% | |
| ! | TTTTCATGAAGAATTTGCCT+TGG | - | chr2_4:13585052-13585071 | Msa0316440:exon | 30.0% |
| ! | TAACTTTTCTACGCATGTAA+TGG | - | chr2_4:13585097-13585116 | Msa0316440:intron | 30.0% |
| AGCAAATGGAAATTGAATCA+GGG | + | chr2_4:13585149-13585168 | None:intergenic | 30.0% | |
| AAGCAAATGGAAATTGAATC+AGG | + | chr2_4:13585150-13585169 | None:intergenic | 30.0% | |
| TATGTACTGAAGAAAGCAAA+TGG | + | chr2_4:13585163-13585182 | None:intergenic | 30.0% | |
| CTTTCTTCAGTACATATTGA+AGG | - | chr2_4:13585167-13585186 | Msa0316440:intron | 30.0% | |
| TATCATACAGTCTTTGACTA+TGG | - | chr2_4:13585653-13585672 | Msa0316440:intron | 30.0% | |
| AACAAACTACTGGCAAATAA+AGG | + | chr2_4:13585727-13585746 | None:intergenic | 30.0% | |
| AAGCAGAAAAAACAAACTAC+TGG | + | chr2_4:13585737-13585756 | None:intergenic | 30.0% | |
| ATATACACAACCACAACTTT+AGG | + | chr2_4:13585875-13585894 | None:intergenic | 30.0% | |
| TCTAAATGCATACAATAGCT+GGG | + | chr2_4:13585937-13585956 | None:intergenic | 30.0% | |
| GGGTTTGAGAGAGAATTTAA+AGG | + | chr2_4:13581206-13581225 | None:intergenic | 35.0% | |
| AGAATGAGAAGAAAGGGTTT+GGG | + | chr2_4:13581226-13581245 | None:intergenic | 35.0% | |
| CTCTTCCATAATCCAATTCT+CGG | - | chr2_4:13581256-13581275 | Msa0316440:three_prime_UTR | 35.0% | |
| TTTAATGCATGTGTGTTTGG+GGG | - | chr2_4:13581433-13581452 | Msa0316440:three_prime_UTR | 35.0% | |
| AGGACGATAAATGTGACATA+AGG | + | chr2_4:13581512-13581531 | None:intergenic | 35.0% | |
| TTTGGATGAACAGGTGAAAA+TGG | - | chr2_4:13582173-13582192 | Msa0316440:intron | 35.0% | |
| TTGGATGAACAGGTGAAAAT+GGG | - | chr2_4:13582174-13582193 | Msa0316440:intron | 35.0% | |
| ! | AATGGGAAACAAGTTGAATG+TGG | - | chr2_4:13582191-13582210 | Msa0316440:intron | 35.0% |
| GTTTCTTGTGTACCAAATGA+TGG | - | chr2_4:13582255-13582274 | Msa0316440:intron | 35.0% | |
| ATTGGAACCCAAAAACTTGT+TGG | - | chr2_4:13582308-13582327 | Msa0316440:CDS | 35.0% | |
| ! | TTGGAACCCAAAAACTTGTT+GGG | - | chr2_4:13582309-13582328 | Msa0316440:CDS | 35.0% |
| TGGTCTTCCATTAAGAAGTA+TGG | - | chr2_4:13582354-13582373 | Msa0316440:CDS | 35.0% | |
| CTTGGAACCATACTTCTTAA+TGG | + | chr2_4:13582364-13582383 | None:intergenic | 35.0% | |
| AAGGAAGAAGACAAACCATT+TGG | + | chr2_4:13582711-13582730 | None:intergenic | 35.0% | |
| AGCTACGACAATGTAAAAGT+TGG | - | chr2_4:13583016-13583035 | Msa0316440:intron | 35.0% | |
| CGTCTGAAGGAAACAAAATA+TGG | + | chr2_4:13583082-13583101 | None:intergenic | 35.0% | |
| TCGCTTCAATAAATTCCTGA+AGG | + | chr2_4:13583146-13583165 | None:intergenic | 35.0% | |
| GGATTTCAAGAGATATCAGT+TGG | - | chr2_4:13583222-13583241 | Msa0316440:CDS | 35.0% | |
| ATGTGCACAGATACCATATT+GGG | + | chr2_4:13583257-13583276 | None:intergenic | 35.0% | |
| AATGTGCACAGATACCATAT+TGG | + | chr2_4:13583258-13583277 | None:intergenic | 35.0% | |
| TTTCCATGCCATTACTCATT+AGG | - | chr2_4:13583314-13583333 | Msa0316440:intron | 35.0% | |
| ! | GTTTAACCATTTTGTACCTG+TGG | + | chr2_4:13583353-13583372 | None:intergenic | 35.0% |
| !! | GGTTAAACAAGGTCTTGTTA+AGG | - | chr2_4:13583365-13583384 | Msa0316440:intron | 35.0% |
| GAATAAACATGTTGACAGTC+AGG | + | chr2_4:13583533-13583552 | None:intergenic | 35.0% | |
| ATGGGAGATGTACTTATTGA+TGG | - | chr2_4:13583632-13583651 | Msa0316440:intron | 35.0% | |
| CAAGCATTTATTCATACCGT+TGG | + | chr2_4:13583837-13583856 | None:intergenic | 35.0% | |
| AGGACTGTTGTTGATCAATA+TGG | - | chr2_4:13584049-13584068 | Msa0316440:CDS | 35.0% | |
| ! | TTCAATTTTGCAATTGCTCG+TGG | - | chr2_4:13584075-13584094 | Msa0316440:CDS | 35.0% |
| TCTCCATAGTTTGGTTGATT+AGG | - | chr2_4:13584116-13584135 | Msa0316440:intron | 35.0% | |
| GAACCTAATCAACCAAACTA+TGG | + | chr2_4:13584122-13584141 | None:intergenic | 35.0% | |
| TCATAGCATTAGACACAGTA+GGG | + | chr2_4:13584397-13584416 | None:intergenic | 35.0% | |
| TTCATAGCATTAGACACAGT+AGG | + | chr2_4:13584398-13584417 | None:intergenic | 35.0% | |
| ! | GATAATAAACTACGCCGATT+CGG | - | chr2_4:13584769-13584788 | Msa0316440:CDS | 35.0% |
| AAAGCTGCAATATCATCACA+AGG | + | chr2_4:13584855-13584874 | None:intergenic | 35.0% | |
| !!! | GTCAAATTTTTTGCCACCAA+TGG | + | chr2_4:13584956-13584975 | None:intergenic | 35.0% |
| TTCACAAAGCAACAAATCCA+AGG | + | chr2_4:13585072-13585091 | None:intergenic | 35.0% | |
| ATCAGGGAAACAGATAAACA+TGG | + | chr2_4:13585133-13585152 | None:intergenic | 35.0% | |
| TCTTCAGTACATATTGAAGG+TGG | - | chr2_4:13585170-13585189 | Msa0316440:intron | 35.0% | |
| CTTCAGTACATATTGAAGGT+GGG | - | chr2_4:13585171-13585190 | Msa0316440:intron | 35.0% | |
| AGTAAAGCCACTAATGCATT+GGG | + | chr2_4:13585211-13585230 | None:intergenic | 35.0% | |
| AAACTTTGATGTACCAGAGT+GGG | + | chr2_4:13585260-13585279 | None:intergenic | 35.0% | |
| TAAACTTTGATGTACCAGAG+TGG | + | chr2_4:13585261-13585280 | None:intergenic | 35.0% | |
| CATGGTTCAATTGGTTGAAT+CGG | - | chr2_4:13585331-13585350 | Msa0316440:intron | 35.0% | |
| CAACTGTTGTTGAACCAATT+GGG | - | chr2_4:13585457-13585476 | Msa0316440:intron | 35.0% | |
| GTATGTGTCAAGTAAAGAAC+CGG | + | chr2_4:13585513-13585532 | None:intergenic | 35.0% | |
| CTTTATAAATGCAGGATCCT+TGG | - | chr2_4:13585611-13585630 | Msa0316440:intron | 35.0% | |
| ATCCTTGGAGATATCTTCAT+GGG | - | chr2_4:13585626-13585645 | Msa0316440:intron | 35.0% | |
| ! | GAATATTCTCTATGCTGCTT+CGG | + | chr2_4:13585699-13585718 | None:intergenic | 35.0% |
| TAAGCCTCAGTAATTGACAT+TGG | - | chr2_4:13585799-13585818 | Msa0316440:intron | 35.0% | |
| TCAAAATGAGCCTAAAGTTG+TGG | - | chr2_4:13585862-13585881 | Msa0316440:intron | 35.0% | |
| TAAATGCATACAATAGCTGG+GGG | + | chr2_4:13585935-13585954 | None:intergenic | 35.0% | |
| CTAAATGCATACAATAGCTG+GGG | + | chr2_4:13585936-13585955 | None:intergenic | 35.0% | |
| CTCTAAATGCATACAATAGC+TGG | + | chr2_4:13585938-13585957 | None:intergenic | 35.0% | |
| ! | TTTTTGCACCATTTCGCGTT+TGG | - | chr2_4:13581175-13581194 | Msa0316440:three_prime_UTR | 40.0% |
| ! | TTTTGCACCATTTCGCGTTT+GGG | - | chr2_4:13581176-13581195 | Msa0316440:three_prime_UTR | 40.0% |
| GAGAATGAGAAGAAAGGGTT+TGG | + | chr2_4:13581227-13581246 | None:intergenic | 40.0% | |
| GGGGGAATGAAATGAGTTTA+TGG | - | chr2_4:13581451-13581470 | Msa0316440:three_prime_UTR | 40.0% | |
| ACACTTTCAATCAGACGTGT+TGG | + | chr2_4:13581738-13581757 | None:intergenic | 40.0% | |
| ! | TGTCTGATTGAAAGTGTGTG+TGG | - | chr2_4:13581755-13581774 | Msa0316440:intron | 40.0% |
| ! | GTCTGATTGAAAGTGTGTGT+GGG | - | chr2_4:13581756-13581775 | Msa0316440:intron | 40.0% |
| ! | TCTGATTGAAAGTGTGTGTG+GGG | - | chr2_4:13581757-13581776 | Msa0316440:intron | 40.0% |
| ! | AATGTACATGCGTTGGTACT+TGG | + | chr2_4:13581801-13581820 | None:intergenic | 40.0% |
| !! | AGTTTTATCTATGGCGTGTC+CGG | - | chr2_4:13581841-13581860 | Msa0316440:intron | 40.0% |
| ACAGAGGACACACATTTACA+TGG | + | chr2_4:13581954-13581973 | None:intergenic | 40.0% | |
| !! | AATGAGCATTGACACAAGCA+CGG | + | chr2_4:13581994-13582013 | None:intergenic | 40.0% |
| TGCTTGTGTCAATGCTCATT+AGG | - | chr2_4:13581994-13582013 | Msa0316440:CDS | 40.0% | |
| ! | TGGTGTTAAGTTTGTGCTTG+TGG | - | chr2_4:13582214-13582233 | Msa0316440:intron | 40.0% |
| ! | GTGGACCCTATTGTTTTCTT+TGG | - | chr2_4:13582233-13582252 | Msa0316440:intron | 40.0% |
| !! | TGGAACCCAAAAACTTGTTG+GGG | - | chr2_4:13582310-13582329 | Msa0316440:CDS | 40.0% |
| ! | TTCGACCCCAACAAGTTTTT+GGG | + | chr2_4:13582318-13582337 | None:intergenic | 40.0% |
| !! | AAAAACTTGTTGGGGTCGAA+GGG | - | chr2_4:13582318-13582337 | Msa0316440:CDS | 40.0% |
| TATGGTTCCAAGAACATCCT+TGG | - | chr2_4:13582372-13582391 | Msa0316440:intron | 40.0% | |
| TACTTGGATGCTCAGTACTA+TGG | - | chr2_4:13582432-13582451 | Msa0316440:intron | 40.0% | |
| ATCACAGTAAAAGTCTGAGG+AGG | + | chr2_4:13582477-13582496 | None:intergenic | 40.0% | |
| !! | ATACTGGTAGCTCTAATACC+TGG | - | chr2_4:13582502-13582521 | Msa0316440:CDS | 40.0% |
| !! | TACTGGTAGCTCTAATACCT+GGG | - | chr2_4:13582503-13582522 | Msa0316440:CDS | 40.0% |
| TCAAGTACCTACAAGCCAAA+TGG | - | chr2_4:13582693-13582712 | Msa0316440:intron | 40.0% | |
| !! | AGACAAACCATTTGGCTTGT+AGG | + | chr2_4:13582703-13582722 | None:intergenic | 40.0% |
| GGCAGATCCTCAAAAAACAA+AGG | + | chr2_4:13582730-13582749 | None:intergenic | 40.0% | |
| ACTCATGCTGCAATTCAGTA+TGG | - | chr2_4:13582968-13582987 | Msa0316440:intron | 40.0% | |
| CTGCAATTCAGTATGGTACT+GGG | - | chr2_4:13582975-13582994 | Msa0316440:intron | 40.0% | |
| TGCAATTCAGTATGGTACTG+GGG | - | chr2_4:13582976-13582995 | Msa0316440:intron | 40.0% | |
| !! | GCTAAGTTTGATGGTTTGCT+TGG | - | chr2_4:13583195-13583214 | Msa0316440:CDS | 40.0% |
| !! | TTTGATGGTTTGCTTGGACT+TGG | - | chr2_4:13583201-13583220 | Msa0316440:CDS | 40.0% |
| TTGGAAATGCTGTCCCAATA+TGG | - | chr2_4:13583241-13583260 | Msa0316440:CDS | 40.0% | |
| TTTCTGCCACAGGTACAAAA+TGG | - | chr2_4:13583344-13583363 | Msa0316440:intron | 40.0% | |
| GCTCAATCGTAATCCAAATG+AGG | - | chr2_4:13583407-13583426 | Msa0316440:intron | 40.0% | |
| CTTATTGATGGAAAACCCAC+TGG | - | chr2_4:13583644-13583663 | Msa0316440:intron | 40.0% | |
| ! | GCACTTTGTTTGATGCTTCA+TGG | - | chr2_4:13583709-13583728 | Msa0316440:intron | 40.0% |
| TCTGACTAGAGTTTATGACC+TGG | - | chr2_4:13583885-13583904 | Msa0316440:intron | 40.0% | |
| GAGTTTACAGTCAAGAATGC+AGG | - | chr2_4:13584029-13584048 | Msa0316440:CDS | 40.0% | |
| ACAGTCAACACTCATGACAA+TGG | + | chr2_4:13584149-13584168 | None:intergenic | 40.0% | |
| ! | TGGTTTTCACTTGGTTATGC+AGG | - | chr2_4:13584273-13584292 | Msa0316440:CDS | 40.0% |
| !!! | ATTTGGGAGCAGACCTTTTT+TGG | + | chr2_4:13584304-13584323 | None:intergenic | 40.0% |
| AAAAAGGTCTGCTCCCAAAT+TGG | - | chr2_4:13584304-13584323 | Msa0316440:intron | 40.0% | |
| AAAAGGTCTGCTCCCAAATT+GGG | - | chr2_4:13584305-13584324 | Msa0316440:intron | 40.0% | |
| AAATGTGCACAGCCCAATTT+GGG | + | chr2_4:13584320-13584339 | None:intergenic | 40.0% | |
| !! | TGAAGTACTGACATAGACAC+TGG | - | chr2_4:13584414-13584433 | Msa0316440:intron | 40.0% |
| TATGACCGGTATCTATGTGT+CGG | + | chr2_4:13584448-13584467 | None:intergenic | 40.0% | |
| AGTGATTGAGTGTAACCACA+TGG | - | chr2_4:13584483-13584502 | Msa0316440:intron | 40.0% | |
| AACAATGATTCCACACCATG+TGG | + | chr2_4:13584501-13584520 | None:intergenic | 40.0% | |
| GTGGAATCATTGTTTGACAC+TGG | - | chr2_4:13584507-13584526 | Msa0316440:intron | 40.0% | |
| ATTAGAGTTATGCAGCACTG+AGG | + | chr2_4:13584569-13584588 | None:intergenic | 40.0% | |
| TACTTGTTCTGTATGCGAGA+TGG | - | chr2_4:13584697-13584716 | Msa0316440:intron | 40.0% | |
| AGCAGAATCAAACAGAAGAG+CGG | - | chr2_4:13584747-13584766 | Msa0316440:CDS | 40.0% | |
| CTATAGTTAAGAGAGGAAGC+AGG | + | chr2_4:13584832-13584851 | None:intergenic | 40.0% | |
| CACAAGGCTATAGTTAAGAG+AGG | + | chr2_4:13584839-13584858 | None:intergenic | 40.0% | |
| TGACAAAATGCCTAACCCAT+TGG | - | chr2_4:13584876-13584895 | Msa0316440:CDS | 40.0% | |
| GACAAAATGCCTAACCCATT+GGG | - | chr2_4:13584877-13584896 | Msa0316440:CDS | 40.0% | |
| CAACAGATGATTGTCCCAAT+GGG | + | chr2_4:13584894-13584913 | None:intergenic | 40.0% | |
| TCAACAGATGATTGTCCCAA+TGG | + | chr2_4:13584895-13584914 | None:intergenic | 40.0% | |
| CCAATGGTGAAGGAAACTTT+AGG | + | chr2_4:13584940-13584959 | None:intergenic | 40.0% | |
| CCTAAAGTTTCCTTCACCAT+TGG | - | chr2_4:13584937-13584956 | Msa0316440:CDS | 40.0% | |
| AAAGTTTCCTTCACCATTGG+TGG | - | chr2_4:13584940-13584959 | Msa0316440:CDS | 40.0% | |
| !!! | TTTTTTGCCACCAATGGTGA+AGG | + | chr2_4:13584950-13584969 | None:intergenic | 40.0% |
| TACATATTGAAGGTGGGTGA+AGG | - | chr2_4:13585177-13585196 | Msa0316440:intron | 40.0% | |
| CAGTAAAGCCACTAATGCAT+TGG | + | chr2_4:13585212-13585231 | None:intergenic | 40.0% | |
| ! | CATTAGTGGCTTTACTGCTT+TGG | - | chr2_4:13585215-13585234 | Msa0316440:intron | 40.0% |
| TCAACCAATTGAACCATGAC+CGG | + | chr2_4:13585329-13585348 | None:intergenic | 40.0% | |
| ! | CCAATTGGTTCAACAACAGT+TGG | + | chr2_4:13585459-13585478 | None:intergenic | 40.0% |
| CCAACTGTTGTTGAACCAAT+TGG | - | chr2_4:13585456-13585475 | Msa0316440:intron | 40.0% | |
| GATCCTTGGAGATATCTTCA+TGG | - | chr2_4:13585625-13585644 | Msa0316440:intron | 40.0% | |
| TCCTTGGAGATATCTTCATG+GGG | - | chr2_4:13585627-13585646 | Msa0316440:intron | 40.0% | |
| GACTATGGTAAACTCAGAGT+TGG | - | chr2_4:13585668-13585687 | Msa0316440:intron | 40.0% | |
| GTTGCCAATGTCAATTACTG+AGG | + | chr2_4:13585806-13585825 | None:intergenic | 40.0% | |
| ! | TTTAGAGTTATGGGCTTGTG+TGG | - | chr2_4:13585951-13585970 | Msa0316440:intron | 40.0% |
| CTTTCAATCAGACGTGTTGG+TGG | + | chr2_4:13581735-13581754 | None:intergenic | 45.0% | |
| TGTCCGGTGTTTGTCTATGT+TGG | - | chr2_4:13581857-13581876 | Msa0316440:intron | 45.0% | |
| GCACCAACATAGACAAACAC+CGG | + | chr2_4:13581863-13581882 | None:intergenic | 45.0% | |
| ! | GGGAAACAAGTTGAATGTGG+TGG | - | chr2_4:13582194-13582213 | Msa0316440:intron | 45.0% |
| !! | TACCAAATGATGGGTTGCGT+AGG | - | chr2_4:13582265-13582284 | Msa0316440:intron | 45.0% |
| ATCCTACGCAACCCATCATT+TGG | + | chr2_4:13582270-13582289 | None:intergenic | 45.0% | |
| !! | AATGATGGGTTGCGTAGGAT+TGG | - | chr2_4:13582270-13582289 | Msa0316440:CDS | 45.0% |
| ! | CTTCGACCCCAACAAGTTTT+TGG | + | chr2_4:13582319-13582338 | None:intergenic | 45.0% |
| !! | CAAAAACTTGTTGGGGTCGA+AGG | - | chr2_4:13582317-13582336 | Msa0316440:CDS | 45.0% |
| ACATTTAACTGATGGCACCC+AGG | + | chr2_4:13582523-13582542 | None:intergenic | 45.0% | |
| GGCTAGACTTGTACTTAGCA+TGG | + | chr2_4:13582671-13582690 | None:intergenic | 45.0% | |
| !! | TTGGCTTGTAGGTACTTGAC+TGG | + | chr2_4:13582692-13582711 | None:intergenic | 45.0% |
| GCTGCAATTCAGTATGGTAC+TGG | - | chr2_4:13582974-13582993 | Msa0316440:intron | 45.0% | |
| AGTTGGCGATGTAGTTGTGA+AGG | - | chr2_4:13583033-13583052 | Msa0316440:intron | 45.0% | |
| TTTGTCGCGGCTAAGTTTGA+TGG | - | chr2_4:13583186-13583205 | Msa0316440:CDS | 45.0% | |
| CCTCCTAATGAGTAATGGCA+TGG | + | chr2_4:13583320-13583339 | None:intergenic | 45.0% | |
| CCATGCCATTACTCATTAGG+AGG | - | chr2_4:13583317-13583336 | Msa0316440:intron | 45.0% | |
| !!! | AGGAGGTATTTTTCTGCCAC+AGG | - | chr2_4:13583334-13583353 | Msa0316440:intron | 45.0% |
| CGTAATCCAAATGAGGAGCA+AGG | - | chr2_4:13583414-13583433 | Msa0316440:intron | 45.0% | |
| AATCCAAATGAGGAGCAAGG+AGG | - | chr2_4:13583417-13583436 | Msa0316440:intron | 45.0% | |
| !! | CAAGGAGGTGAGCTTGTTTT+TGG | - | chr2_4:13583432-13583451 | Msa0316440:CDS | 45.0% |
| TGTTGATCCTGCTCACTTCA+AGG | - | chr2_4:13583458-13583477 | Msa0316440:CDS | 45.0% | |
| GTTGATCCTGCTCACTTCAA+GGG | - | chr2_4:13583459-13583478 | Msa0316440:CDS | 45.0% | |
| ! | CAATATCCTTTTCGCGTCAC+AGG | + | chr2_4:13583501-13583520 | None:intergenic | 45.0% |
| CTGTGACGCGAAAAGGATAT+TGG | - | chr2_4:13583499-13583518 | Msa0316440:intron | 45.0% | |
| CGAAAAGGATATTGGCAGGT+TGG | - | chr2_4:13583507-13583526 | Msa0316440:intron | 45.0% | |
| TGTTCAGCAATAGCAGACTC+AGG | - | chr2_4:13583792-13583811 | Msa0316440:CDS | 45.0% | |
| GTTCAGCAATAGCAGACTCA+GGG | - | chr2_4:13583793-13583812 | Msa0316440:CDS | 45.0% | |
| ! | AACCAAGCAATTGGAGCATC+TGG | - | chr2_4:13584007-13584026 | Msa0316440:CDS | 45.0% |
| TATGCAGGCACAGCCAAAAA+AGG | - | chr2_4:13584288-13584307 | Msa0316440:intron | 45.0% | |
| CAAATGTGCACAGCCCAATT+TGG | + | chr2_4:13584321-13584340 | None:intergenic | 45.0% | |
| ATTGGGCTGTGCACATTTGA+TGG | - | chr2_4:13584322-13584341 | Msa0316440:intron | 45.0% | |
| ! | TGCACATTTGATGGCACTCA+TGG | - | chr2_4:13584331-13584350 | Msa0316440:intron | 45.0% |
| ! | TTGATGGCACTCATGGTGTT+AGG | - | chr2_4:13584338-13584357 | Msa0316440:intron | 45.0% |
| TTGAGTGTAACCACATGGTG+TGG | - | chr2_4:13584488-13584507 | Msa0316440:intron | 45.0% | |
| ACTCTGGATACCCATACTAG+AGG | + | chr2_4:13584630-13584649 | None:intergenic | 45.0% | |
| TAGTATGGGTATCCAGAGTG+TGG | - | chr2_4:13584631-13584650 | Msa0316440:intron | 45.0% | |
| ! | CAGACCGATAGAGTATCATC+CGG | - | chr2_4:13584659-13584678 | Msa0316440:intron | 45.0% |
| ACCACCGGATGATACTCTAT+CGG | + | chr2_4:13584666-13584685 | None:intergenic | 45.0% | |
| ! | AGTAGCATCTTGATGACCAC+CGG | + | chr2_4:13584681-13584700 | None:intergenic | 45.0% |
| CTGTTTGATTCTGCTTCAGC+TGG | + | chr2_4:13584742-13584761 | None:intergenic | 45.0% | |
| ! | GATGATTGTCCCAATGGGTT+AGG | + | chr2_4:13584889-13584908 | None:intergenic | 45.0% |
| GGTGAAGGAAACTTTAGGCA+TGG | + | chr2_4:13584935-13584954 | None:intergenic | 45.0% | |
| !! | ATTATACCTCTTCTGGGGCA+AGG | + | chr2_4:13584978-13584997 | None:intergenic | 45.0% |
| CAAAACGACACTAGAGATCC+CGG | - | chr2_4:13585297-13585316 | Msa0316440:intron | 45.0% | |
| AAAACGACACTAGAGATCCC+GGG | - | chr2_4:13585298-13585317 | Msa0316440:intron | 45.0% | |
| CAGATTGAACTGGGTTCTAC+TGG | + | chr2_4:13585408-13585427 | None:intergenic | 45.0% | |
| CAGTAGAACCCAGTTCAATC+TGG | - | chr2_4:13585406-13585425 | Msa0316440:intron | 45.0% | |
| TTGAACCAATTGGGAGATGC+CGG | - | chr2_4:13585466-13585485 | Msa0316440:intron | 45.0% | |
| AAAAACCGGCATCTCCCAAT+TGG | + | chr2_4:13585474-13585493 | None:intergenic | 45.0% | |
| !!! | AATTGGGAGATGCCGGTTTT+TGG | - | chr2_4:13585473-13585492 | Msa0316440:intron | 45.0% |
| TGTCAAGTAAAGAACCGGAC+CGG | + | chr2_4:13585508-13585527 | None:intergenic | 45.0% | |
| !!! | GATTATTTTATATTTTTATT+TGG | - | chr2_4:13582114-13582133 | Msa0316440:intron | 5.0% |
| !! | ACTTATTTAAAAAATAAATA+AGG | - | chr2_4:13585368-13585387 | Msa0316440:intron | 5.0% |
| AGGCAAACCCAAACGCGAAA+TGG | + | chr2_4:13581186-13581205 | None:intergenic | 50.0% | |
| AAAGTGTGTGTGGGGTGTGT+GGG | - | chr2_4:13581765-13581784 | Msa0316440:intron | 50.0% | |
| CATTGACACAAGCACGGACA+CGG | + | chr2_4:13581988-13582007 | None:intergenic | 50.0% | |
| CGAAGGGTTGTGGATCATCA+TGG | - | chr2_4:13582334-13582353 | Msa0316440:CDS | 50.0% | |
| GGTTCCAAGAACATCCTTGG+AGG | - | chr2_4:13582375-13582394 | Msa0316440:intron | 50.0% | |
| AGCTCCTCCAAGGATGTTCT+TGG | + | chr2_4:13582382-13582401 | None:intergenic | 50.0% | |
| AAGAACATCCTTGGAGGAGC+TGG | - | chr2_4:13582381-13582400 | Msa0316440:intron | 50.0% | |
| !! | AGTCTGAGGAGGAGTACCAA+TGG | + | chr2_4:13582466-13582485 | None:intergenic | 50.0% |
| ! | TATGGTACTGGGGCAGTTTC+TGG | - | chr2_4:13582986-13583005 | Msa0316440:intron | 50.0% |
| CGATGTAGTTGTGAAGGACG+TGG | - | chr2_4:13583039-13583058 | Msa0316440:intron | 50.0% | |
| ATTGAAGCGACTAGAGAGCC+TGG | - | chr2_4:13583156-13583175 | Msa0316440:intron | 50.0% | |
| GCCTGGACTTACATTTGTCG+CGG | - | chr2_4:13583173-13583192 | Msa0316440:CDS | 50.0% | |
| TCACCTCCTTGCTCCTCATT+TGG | + | chr2_4:13583423-13583442 | None:intergenic | 50.0% | |
| !!! | GGAGGTGAGCTTGTTTTTGG+TGG | - | chr2_4:13583435-13583454 | Msa0316440:CDS | 50.0% |
| GACGCGAAAAGGATATTGGC+AGG | - | chr2_4:13583503-13583522 | Msa0316440:intron | 50.0% | |
| AGACTCAGGGACGTCTTTGT+TGG | - | chr2_4:13583806-13583825 | Msa0316440:CDS | 50.0% | |
| GTCTTTGTTGGCAGGTCCAA+CGG | - | chr2_4:13583818-13583837 | Msa0316440:CDS | 50.0% | |
| CTCCAGATGCTCCAATTGCT+TGG | + | chr2_4:13584012-13584031 | None:intergenic | 50.0% | |
| CGACACCGACACATAGATAC+CGG | - | chr2_4:13584440-13584459 | Msa0316440:intron | 50.0% | |
| TATGGGTATCCAGAGTGTGG+TGG | - | chr2_4:13584634-13584653 | Msa0316440:intron | 50.0% | |
| ! | ACCGATAGAGTATCATCCGG+TGG | - | chr2_4:13584662-13584681 | Msa0316440:intron | 50.0% |
| TATGCGAGATGGCTGTTGTC+TGG | - | chr2_4:13584708-13584727 | Msa0316440:CDS | 50.0% | |
| ATTTGACCTTGCCCCAGAAG+AGG | - | chr2_4:13584969-13584988 | Msa0316440:CDS | 50.0% | |
| GAGACCGGTCATGGTTCAAT+TGG | - | chr2_4:13585322-13585341 | Msa0316440:intron | 50.0% | |
| ! | CGGCTGGTTCAACCAAAAAC+CGG | + | chr2_4:13585488-13585507 | None:intergenic | 50.0% |
| !!! | CGGTTTTTGGTTGAACCAGC+CGG | - | chr2_4:13585486-13585505 | Msa0316440:intron | 50.0% |
| GCCCCATGAAGATATCTCCA+AGG | + | chr2_4:13585631-13585650 | None:intergenic | 50.0% | |
| TGCATACAATAGCTGGGGGA+GGG | + | chr2_4:13585931-13585950 | None:intergenic | 50.0% | |
| ATGCATACAATAGCTGGGGG+AGG | + | chr2_4:13585932-13585951 | None:intergenic | 50.0% | |
| TGTGGCCTGTGGCCATTATT+GGG | - | chr2_4:13585969-13585988 | Msa0316440:intron | 50.0% | |
| AGAGACCCAATAATGGCCAC+AGG | + | chr2_4:13585977-13585996 | None:intergenic | 50.0% | |
| ! | GAAAGTGTGTGTGGGGTGTG+TGG | - | chr2_4:13581764-13581783 | Msa0316440:intron | 55.0% |
| TTGTTGGGGTCGAAGGGTTG+TGG | - | chr2_4:13582324-13582343 | Msa0316440:CDS | 55.0% | |
| GCCGCGACAAATGTAAGTCC+AGG | + | chr2_4:13583177-13583196 | None:intergenic | 55.0% | |
| TGTTCGCCCTTGAAGTGAGC+AGG | + | chr2_4:13583468-13583487 | None:intergenic | 55.0% | |
| TACGTGCCTGTGACGCGAAA+AGG | - | chr2_4:13583492-13583511 | Msa0316440:intron | 55.0% | |
| TCAGGGACGTCTTTGTTGGC+AGG | - | chr2_4:13583810-13583829 | Msa0316440:CDS | 55.0% | |
| CACTGGCACACATCAGACAC+CGG | - | chr2_4:13584524-13584543 | Msa0316440:intron | 55.0% | |
| GCTGCAGCCCAATGCATTAG+TGG | - | chr2_4:13585201-13585220 | Msa0316440:intron | 55.0% | |
| TTGGATGTTCCTCCTCCACG+TGG | - | chr2_4:13585234-13585253 | Msa0316440:intron | 55.0% | |
| TTTGGTTGAACCAGCCGGTC+CGG | - | chr2_4:13585491-13585510 | Msa0316440:intron | 55.0% | |
| AAGTAAAGAACCGGACCGGC+TGG | + | chr2_4:13585504-13585523 | None:intergenic | 55.0% | |
| GCATACAATAGCTGGGGGAG+GGG | + | chr2_4:13585930-13585949 | None:intergenic | 55.0% | |
| TTATGGGCTTGTGTGGCCTG+TGG | - | chr2_4:13585958-13585977 | Msa0316440:intron | 55.0% | |
| GTGTGGCCTGTGGCCATTAT+TGG | - | chr2_4:13585968-13585987 | Msa0316440:intron | 55.0% | |
| CACGGACACGGACACAACAG+AGG | + | chr2_4:13581970-13581989 | None:intergenic | 60.0% | |
| CACAAGCACGGACACGGACA+CGG | + | chr2_4:13581982-13582001 | None:intergenic | 60.0% | |
| CAGCTTCTCCAGCTCCTCCA+AGG | + | chr2_4:13582392-13582411 | None:intergenic | 60.0% | |
| CGGTCTGTTCCACCACACTC+TGG | + | chr2_4:13584646-13584665 | None:intergenic | 60.0% | |
| ATGTACCAGAGTGGGCCACG+TGG | + | chr2_4:13585252-13585271 | None:intergenic | 60.0% | |
| CTAGAGATCCCGGGTGAGAC+CGG | - | chr2_4:13585307-13585326 | Msa0316440:intron | 60.0% | |
| AACCATGACCGGTCTCACCC+GGG | + | chr2_4:13585318-13585337 | None:intergenic | 60.0% | |
| GAACCATGACCGGTCTCACC+CGG | + | chr2_4:13585319-13585338 | None:intergenic | 60.0% | |
| TACCAGAGTGGGCCACGTGG+AGG | + | chr2_4:13585249-13585268 | None:intergenic | 65.0% | |
| ATCCCGGGTGAGACCGGTCA+TGG | - | chr2_4:13585313-13585332 | Msa0316440:intron | 65.0% | |
| CAGAGTGGGCCACGTGGAGG+AGG | + | chr2_4:13585246-13585265 | None:intergenic | 70.0% | |
| CTCCTCCACGTGGCCCACTC+TGG | - | chr2_4:13585244-13585263 | Msa0316440:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 13581155 | 13586104 | 13581155 | ID=Msa0316440;Name=Msa0316440 |
| chr2_4 | mRNA | 13581155 | 13586104 | 13581155 | ID=Msa0316440-mRNA-1;Parent=Msa0316440;Name=Msa0316440-mRNA-1;_AED=0.12;_eAED=0.12;_QI=129|1|1|1|0.92|0.85|14|395|510 |
| chr2_4 | exon | 13581155 | 13581634 | 13581155 | ID=Msa0316440-mRNA-1:exon:5126;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13581994 | 13582082 | 13581994 | ID=Msa0316440-mRNA-1:exon:5125;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13582269 | 13582388 | 13582269 | ID=Msa0316440-mRNA-1:exon:5124;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13582469 | 13582625 | 13582469 | ID=Msa0316440-mRNA-1:exon:5123;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13582900 | 13582964 | 13582900 | ID=Msa0316440-mRNA-1:exon:5122;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13583157 | 13583270 | 13583157 | ID=Msa0316440-mRNA-1:exon:5121;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13583420 | 13583484 | 13583420 | ID=Msa0316440-mRNA-1:exon:5120;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13583594 | 13583633 | 13583594 | ID=Msa0316440-mRNA-1:exon:5119;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13583735 | 13583903 | 13583735 | ID=Msa0316440-mRNA-1:exon:5118;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13583997 | 13584109 | 13583997 | ID=Msa0316440-mRNA-1:exon:5117;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13584199 | 13584293 | 13584199 | ID=Msa0316440-mRNA-1:exon:5116;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13584545 | 13584605 | 13584545 | ID=Msa0316440-mRNA-1:exon:5115;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13584708 | 13585073 | 13584708 | ID=Msa0316440-mRNA-1:exon:5114;Parent=Msa0316440-mRNA-1 |
| chr2_4 | exon | 13585982 | 13586104 | 13585982 | ID=Msa0316440-mRNA-1:exon:5113;Parent=Msa0316440-mRNA-1 |
| chr2_4 | five_prime_UTR | 13585982 | 13586104 | 13585982 | ID=Msa0316440-mRNA-1:five_prime_utr;Parent=Msa0316440-mRNA-1 |
| chr2_4 | five_prime_UTR | 13585068 | 13585073 | 13585068 | ID=Msa0316440-mRNA-1:five_prime_utr;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13584708 | 13585067 | 13584708 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13584545 | 13584605 | 13584545 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13584199 | 13584293 | 13584199 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13583997 | 13584109 | 13583997 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13583735 | 13583903 | 13583735 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13583594 | 13583633 | 13583594 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13583420 | 13583484 | 13583420 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13583157 | 13583270 | 13583157 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13582900 | 13582964 | 13582900 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13582469 | 13582625 | 13582469 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13582269 | 13582388 | 13582269 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13581994 | 13582082 | 13581994 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | CDS | 13581550 | 13581634 | 13581550 | ID=Msa0316440-mRNA-1:cds;Parent=Msa0316440-mRNA-1 |
| chr2_4 | three_prime_UTR | 13581155 | 13581549 | 13581155 | ID=Msa0316440-mRNA-1:three_prime_utr;Parent=Msa0316440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
