Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317860 | XP_013463045.1 | 97.727 | 308 | 7 | 0 | 1 | 308 | 380 | 687 | 0.0 | 639 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317860 | sp|B5X582|TWIH_ARATH | 73.927 | 303 | 79 | 0 | 1 | 303 | 391 | 693 | 3.01e-168 | 486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0056520 | Msa0317860 | 0.806757 | 7.046162e-50 | -8.615850e-47 |
| Msa0056690 | Msa0317860 | 0.801408 | 9.134109e-49 | -8.615850e-47 |
| Msa0241620 | Msa0317860 | 0.926021 | 8.303405e-91 | -8.615850e-47 |
| Msa0317860 | Msa0487770 | 0.818124 | 2.308244e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317860 | MtrunA17_Chr2g0293211 | 97.727 | 308 | 7 | 0 | 1 | 308 | 380 | 687 | 0.0 | 639 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317860 | AT1G30680.1 | 73.927 | 303 | 79 | 0 | 1 | 303 | 391 | 693 | 3.06e-169 | 486 |
Find 121 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACAGGTTCTCATGTATT+TGG | 0.141732 | 2_4:+15937462 | Msa0317860:intron |
| GAGGAGCTTGCACGCCGTTT+TGG | 0.175124 | 2_4:+15936275 | Msa0317860:five_prime_UTR |
| TCAAGAACCCACTTTATATT+TGG | 0.181500 | 2_4:-15940720 | None:intergenic |
| TTTAAAGAGAATTACATATT+TGG | 0.231007 | 2_4:-15940825 | None:intergenic |
| AGAACATGCTCGAAAACTTT+TGG | 0.253000 | 2_4:+15938949 | Msa0317860:CDS |
| ACTGTATAATATCATAATTT+TGG | 0.259792 | 2_4:+15942455 | Msa0317860:three_prime_UTR |
| TTGGGCAAAGCGTTTAATTA+AGG | 0.281784 | 2_4:-15941582 | None:intergenic |
| GTAACTGGAGTTCCGAATTC+AGG | 0.302882 | 2_4:+15938264 | Msa0317860:CDS |
| GAATTGTTATTCATCGTAAT+CGG | 0.303069 | 2_4:+15941811 | Msa0317860:CDS |
| TCACAGGTTCTCATGTATTT+GGG | 0.307475 | 2_4:+15937463 | Msa0317860:intron |
| CCTATAAAAGGACAACTAAA+TGG | 0.320160 | 2_4:-15942492 | None:intergenic |
| GTAACACTAACACCTATAAA+AGG | 0.321397 | 2_4:-15942504 | None:intergenic |
| CGCATATTATCATCGAACTT+TGG | 0.321937 | 2_4:+15937576 | Msa0317860:CDS |
| ATTTACTTTCGCAGGGTAAC+TGG | 0.335988 | 2_4:+15942242 | Msa0317860:intron |
| ACTTTGTTCCATGGAGAATA+AGG | 0.336711 | 2_4:+15938350 | Msa0317860:CDS |
| CGACCTTATTTCTCACCTTC+CGG | 0.339307 | 2_4:-15941965 | None:intergenic |
| AGACGCTGAGCGGATGAGTT+TGG | 0.340373 | 2_4:+15939475 | Msa0317860:CDS |
| GCATATTATCATCGAACTTT+GGG | 0.345820 | 2_4:+15937577 | Msa0317860:CDS |
| CACTCACTCTTCCCTGAATT+CGG | 0.347240 | 2_4:-15938276 | None:intergenic |
| ATCGCTTCTTTCAGTGCATC+GGG | 0.349171 | 2_4:-15937487 | None:intergenic |
| AACATCATGGATGCCATGTT+TGG | 0.367840 | 2_4:+15941603 | Msa0317860:CDS |
| TCATCTCATAGCTGCACAAT+TGG | 0.370606 | 2_4:+15941721 | Msa0317860:intron |
| CCGCTTATATCATAAAGATT+AGG | 0.383748 | 2_4:-15941756 | None:intergenic |
| AGGCCGTATTGTTGTATAAC+AGG | 0.384115 | 2_4:+15942003 | Msa0317860:CDS |
| CATCAGTTGCAAGGATAATC+CGG | 0.392294 | 2_4:-15936226 | None:intergenic |
| CTATCTCTTTCTATCATCTT+CGG | 0.395659 | 2_4:-15942273 | None:intergenic |
| CTCACCTGCACTTGATCAAC+AGG | 0.399640 | 2_4:-15941849 | None:intergenic |
| TTCAAAGGAGTTGCCACCTC+TGG | 0.402845 | 2_4:+15935904 | None:intergenic |
| TGATGATCAAGCTCATTATA+AGG | 0.407541 | 2_4:-15940795 | None:intergenic |
| AACAACATAGCCATGTTTAG+AGG | 0.413826 | 2_4:-15942368 | None:intergenic |
| GCACAATCATTTGAGATTGA+AGG | 0.421811 | 2_4:-15942607 | None:intergenic |
| ACTCATCCGCTCAGCGTCTT+CGG | 0.424122 | 2_4:-15939471 | None:intergenic |
| GGAGAACTGACCATAGTAAC+TGG | 0.426651 | 2_4:+15938249 | Msa0317860:CDS |
| AATCGCTTCTTTCAGTGCAT+CGG | 0.431723 | 2_4:-15937488 | None:intergenic |
| ATCTTAATCAAAGTGCTGGC+TGG | 0.433569 | 2_4:+15938319 | Msa0317860:CDS |
| GCAGTCACACAAATGAGTTT+TGG | 0.436506 | 2_4:+15942298 | Msa0317860:three_prime_UTR |
| AATAAGGTCGCAGGGACAAT+AGG | 0.440604 | 2_4:+15941978 | Msa0317860:CDS |
| GGAGTTGCCACCTCTGGAAC+AGG | 0.440701 | 2_4:+15935910 | None:intergenic |
| TTCCACTCCTTTCTATGTAC+CGG | 0.448022 | 2_4:+15936147 | Msa0317860:five_prime_UTR |
| GCCATATATACCAACCTGCC+TGG | 0.448721 | 2_4:-15941639 | None:intergenic |
| CTTGTATAGTATATAGATAT+AGG | 0.449206 | 2_4:+15942562 | Msa0317860:three_prime_UTR |
| TGATCAACAGGCCCGGCCTC+AGG | 0.458799 | 2_4:-15941837 | None:intergenic |
| ATTCGGAACTCCAGTTACTA+TGG | 0.460960 | 2_4:-15938259 | None:intergenic |
| CGGATTATCCTTGCAACTGA+TGG | 0.462257 | 2_4:+15936227 | Msa0317860:five_prime_UTR |
| CATCTCATAGCTGCACAATT+GGG | 0.466495 | 2_4:+15941722 | Msa0317860:intron |
| CGATCCACCTGGTCAAGCCT+TGG | 0.467064 | 2_4:+15936250 | Msa0317860:five_prime_UTR |
| GAAATTTGCACTTTGTTCCA+TGG | 0.467133 | 2_4:+15938341 | Msa0317860:CDS |
| TGTCCGGAAGGTGAGAAATA+AGG | 0.467744 | 2_4:+15941962 | Msa0317860:CDS |
| CATTGCTTCAGGTTTGTGTC+CGG | 0.474160 | 2_4:+15941946 | Msa0317860:intron |
| AAGTTAAACAATCCACGTAT+AGG | 0.474899 | 2_4:-15937529 | None:intergenic |
| CGTAATCGGGATCCTGAGGC+CGG | 0.475483 | 2_4:+15941825 | Msa0317860:CDS |
| GTTTATATTGATAGGCATCC+CGG | 0.476674 | 2_4:+15936207 | Msa0317860:five_prime_UTR |
| AAAGAGAATTACATATTTGG+AGG | 0.479888 | 2_4:-15940822 | None:intergenic |
| AATTGTTATTCATCGTAATC+GGG | 0.483163 | 2_4:+15941812 | Msa0317860:CDS |
| CATAGCTGCACAATTGGGTT+GGG | 0.484861 | 2_4:+15941727 | Msa0317860:intron |
| AACATGGCATCCATGATGTT+GGG | 0.486362 | 2_4:-15941600 | None:intergenic |
| AAAAGCCTTTCTTTAATGAT+CGG | 0.489979 | 2_4:+15938984 | Msa0317860:CDS |
| TCTTACCGATCATTAAAGAA+AGG | 0.490585 | 2_4:-15938989 | None:intergenic |
| CTGGCTGGAATAATCTGAAT+GGG | 0.493298 | 2_4:+15937620 | Msa0317860:CDS |
| AAACGCTTTGCCCAACATCA+TGG | 0.493918 | 2_4:+15941590 | Msa0317860:CDS |
| GTTACTATGGTCAGTTCTCC+CGG | 0.495913 | 2_4:-15938246 | None:intergenic |
| TGCAATCTTAATCAAAGTGC+TGG | 0.496032 | 2_4:+15938315 | Msa0317860:CDS |
| GTTTAATTAAGGTAAGCATC+TGG | 0.496962 | 2_4:-15941571 | None:intergenic |
| TACTTTCACCAGATTGTGCC+GGG | 0.497341 | 2_4:+15938228 | Msa0317860:intron |
| TCATAGCTGCACAATTGGGT+TGG | 0.498544 | 2_4:+15941726 | Msa0317860:intron |
| CTATATCTATATACTATACA+AGG | 0.498735 | 2_4:-15942561 | None:intergenic |
| AAACATGGCATCCATGATGT+TGG | 0.499562 | 2_4:-15941601 | None:intergenic |
| ATGCTCTTCCAAATATAAAG+TGG | 0.499888 | 2_4:+15940712 | Msa0317860:CDS |
| TATGACACTGGTCTCTCTAC+TGG | 0.500616 | 2_4:+15937601 | Msa0317860:CDS |
| ACTGGCTGGAATAATCTGAA+TGG | 0.503322 | 2_4:+15937619 | Msa0317860:CDS |
| TAACTGGAGTTCCGAATTCA+GGG | 0.504392 | 2_4:+15938265 | Msa0317860:CDS |
| GTTTGTAGCACATCCCAGGC+AGG | 0.504441 | 2_4:+15941625 | Msa0317860:CDS |
| TCCTCAGCCAAGGCTTGACC+AGG | 0.506819 | 2_4:-15936257 | None:intergenic |
| AATATGAAGAAGGCAAGCTC+TGG | 0.529287 | 2_4:+15939501 | Msa0317860:CDS |
| CCATATATACCAACCTGCCT+GGG | 0.532958 | 2_4:-15941638 | None:intergenic |
| TATTATTTACCACATCGATC+CGG | 0.535770 | 2_4:-15942405 | None:intergenic |
| TTGCAAAGATGAACTAAAGC+AGG | 0.536088 | 2_4:+15936108 | Msa0317860:intron |
| AAGGTGAGAAATAAGGTCGC+AGG | 0.536242 | 2_4:+15941969 | Msa0317860:CDS |
| ACCTGGTCAAGCCTTGGCTG+AGG | 0.537122 | 2_4:+15936256 | Msa0317860:five_prime_UTR |
| TTTGGTTTGTAGCACATCCC+AGG | 0.537981 | 2_4:+15941621 | Msa0317860:CDS |
| GCAACTGATGGCGATCCACC+TGG | 0.539027 | 2_4:+15936239 | Msa0317860:five_prime_UTR |
| CGGGCCTGTTGATCAAGTGC+AGG | 0.540239 | 2_4:+15941845 | Msa0317860:CDS |
| GCAGATGCTGGCGTGTCAGA+TGG | 0.542409 | 2_4:+15937027 | Msa0317860:intron |
| ACACTGGTCTCTCTACTGGC+TGG | 0.544550 | 2_4:+15937605 | Msa0317860:CDS |
| AGTATATTCTAGCAATGTGT+AGG | 0.544728 | 2_4:-15935988 | None:intergenic |
| CGAATTCAGGGAAGAGTGAG+TGG | 0.547747 | 2_4:+15938277 | Msa0317860:CDS |
| ATACCTGTTATACAACAATA+CGG | 0.553186 | 2_4:-15942006 | None:intergenic |
| GCGTGCAAGCTCCTCAGCCA+AGG | 0.560440 | 2_4:-15936267 | None:intergenic |
| TCTACTGACCTTATTCTCCA+TGG | 0.565024 | 2_4:-15938358 | None:intergenic |
| TTACTTTCACCAGATTGTGC+CGG | 0.567232 | 2_4:+15938227 | Msa0317860:intron |
| CTTATATCATAAAGATTAGG+AGG | 0.567765 | 2_4:-15941753 | None:intergenic |
| ATCAGTTGCAAGGATAATCC+GGG | 0.568001 | 2_4:-15936225 | None:intergenic |
| TTTATAAATAAGTGTGACAA+TGG | 0.568385 | 2_4:+15941789 | Msa0317860:CDS |
| CGCTGAGCGGATGAGTTTGG+AGG | 0.569171 | 2_4:+15939478 | Msa0317860:CDS |
| GCTTCAGGTTTGTGTCCGGA+AGG | 0.581145 | 2_4:+15941950 | Msa0317860:intron |
| GTATTAAGACACGGGGTGCG+TGG | 0.581312 | 2_4:+15940759 | Msa0317860:CDS |
| CCTAATCTTTATGATATAAG+CGG | 0.581671 | 2_4:+15941756 | Msa0317860:CDS |
| GTAATCGGGATCCTGAGGCC+GGG | 0.586633 | 2_4:+15941826 | Msa0317860:CDS |
| AGTTTGGAGGAATATGAAGA+AGG | 0.589452 | 2_4:+15939491 | Msa0317860:CDS |
| TGCTCTTCCAAATATAAAGT+GGG | 0.597225 | 2_4:+15940713 | Msa0317860:CDS |
| AAGCAGCTGTATTAAGACAC+GGG | 0.597710 | 2_4:+15940751 | Msa0317860:CDS |
| CTGCACTTGATCAACAGGCC+CGG | 0.599454 | 2_4:-15941844 | None:intergenic |
| TCAGCCAAGGCTTGACCAGG+TGG | 0.600418 | 2_4:-15936254 | None:intergenic |
| CGAACTTTGGGATATGACAC+TGG | 0.604166 | 2_4:+15937589 | Msa0317860:CDS |
| TCATCGTAATCGGGATCCTG+AGG | 0.612531 | 2_4:+15941821 | Msa0317860:CDS |
| TAAATAATAACATCTTAACA+AGG | 0.612782 | 2_4:+15942419 | Msa0317860:three_prime_UTR |
| GTGGATCGCCATCAGTTGCA+AGG | 0.619983 | 2_4:-15936235 | None:intergenic |
| CACCGGTACATAGAAAGGAG+TGG | 0.620658 | 2_4:-15936149 | None:intergenic |
| AGGTGAGAAATAAGGTCGCA+GGG | 0.625704 | 2_4:+15941970 | Msa0317860:CDS |
| AAAGCAGCTGTATTAAGACA+CGG | 0.632991 | 2_4:+15940750 | Msa0317860:CDS |
| GATGTGCTACAAACCAAACA+TGG | 0.643337 | 2_4:-15941616 | None:intergenic |
| TGACTGTATACTGGTCAGCA+TGG | 0.643739 | 2_4:+15942323 | Msa0317860:three_prime_UTR |
| AAAGTTATCACCTCTAAACA+TGG | 0.655982 | 2_4:+15942358 | Msa0317860:three_prime_UTR |
| AAATAATAACATCTTAACAA+GGG | 0.658651 | 2_4:+15942420 | Msa0317860:three_prime_UTR |
| TTTGAGGTGCCGGATCGATG+TGG | 0.663012 | 2_4:+15942396 | Msa0317860:three_prime_UTR |
| TGATTGCAAAGATGCAAATG+AGG | 0.670732 | 2_4:+15937070 | Msa0317860:five_prime_UTR |
| GGTCGCAGGGACAATAGGTG+AGG | 0.674790 | 2_4:+15941983 | Msa0317860:CDS |
| TCGCTTCTTTCAGTGCATCG+GGG | 0.709916 | 2_4:-15937486 | None:intergenic |
| GCAGAACTATATCCTATACG+TGG | 0.711376 | 2_4:+15937517 | Msa0317860:CDS |
| AGCAGCTGTATTAAGACACG+GGG | 0.712601 | 2_4:+15940752 | Msa0317860:CDS |
| GCTACGCCGAAGACGCTGAG+CGG | 0.738729 | 2_4:+15939465 | Msa0317860:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATAATAAATTTTAAAT+AGG | - | chr2_4:15941689-15941708 | None:intergenic | 0.0% |
| !! | ATAAAAATAAAGGAATTATT+AGG | - | chr2_4:15936914-15936933 | None:intergenic | 10.0% |
| !! | ATTTATTATTCATTAATACA+TGG | + | chr2_4:15937270-15937289 | Msa0317860:intron | 10.0% |
| !! | ATATCTTGAATAATTATTTA+TGG | + | chr2_4:15937991-15938010 | Msa0317860:intron | 10.0% |
| !! | AGTTAGAAATAATATAAATA+GGG | + | chr2_4:15940129-15940148 | Msa0317860:intron | 10.0% |
| !! | ATAAGCAATATATTTAATTA+TGG | - | chr2_4:15941497-15941516 | None:intergenic | 10.0% |
| !! | ATAGTATAAAAGATTTATAC+GGG | - | chr2_4:15936503-15936522 | None:intergenic | 15.0% |
| !! | CATAGTATAAAAGATTTATA+CGG | - | chr2_4:15936504-15936523 | None:intergenic | 15.0% |
| !!! | GTATAAATCTTTTATACTAT+GGG | + | chr2_4:15936503-15936522 | Msa0317860:intron | 15.0% |
| !! | TCCTACATAAAATAAAATTA+TGG | + | chr2_4:15936620-15936639 | Msa0317860:intron | 15.0% |
| !!! | AATTCCTTTATTTTTATCAA+TGG | + | chr2_4:15936917-15936936 | Msa0317860:intron | 15.0% |
| !!! | ATTCCTTTATTTTTATCAAT+GGG | + | chr2_4:15936918-15936937 | Msa0317860:intron | 15.0% |
| !! | TTAATGAATAATAAATTCAC+AGG | - | chr2_4:15937266-15937285 | None:intergenic | 15.0% |
| !!! | TTTGTTGATTTTTTGTTTTT+AGG | + | chr2_4:15937706-15937725 | Msa0317860:intron | 15.0% |
| !!! | TTGTTGATTTTTTGTTTTTA+GGG | + | chr2_4:15937707-15937726 | Msa0317860:intron | 15.0% |
| !!! | CTGTTATTAAAATTTGTTTT+TGG | + | chr2_4:15938055-15938074 | Msa0317860:intron | 15.0% |
| !! | ATTGTATAATGTTTATATTG+AGG | + | chr2_4:15938495-15938514 | Msa0317860:intron | 15.0% |
| !! | AAAAACAAAACAAACAAAAA+AGG | - | chr2_4:15938575-15938594 | None:intergenic | 15.0% |
| !!! | ATCATATTTTAACATTTTCT+CGG | + | chr2_4:15939590-15939609 | Msa0317860:intron | 15.0% |
| !! | AAATTAAATCTGTTGAAATT+CGG | - | chr2_4:15939987-15940006 | None:intergenic | 15.0% |
| !!! | TTTCAACAGATTTAATTTAT+TGG | + | chr2_4:15939989-15940008 | Msa0317860:intron | 15.0% |
| !! | TTTCGTTATATAAATTAGTA+AGG | + | chr2_4:15940039-15940058 | Msa0317860:intron | 15.0% |
| !! | CAGTTAGAAATAATATAAAT+AGG | + | chr2_4:15940128-15940147 | Msa0317860:intron | 15.0% |
| !! | CATAATAAATTACACAATAA+CGG | + | chr2_4:15940297-15940316 | Msa0317860:intron | 15.0% |
| !! | TTTAAAGAGAATTACATATT+TGG | - | chr2_4:15940828-15940847 | None:intergenic | 15.0% |
| !! | AAAATTGAAATACTCAATAA+AGG | + | chr2_4:15940973-15940992 | Msa0317860:intron | 15.0% |
| !!! | TGACATTATTTTCTAAATTT+TGG | + | chr2_4:15941878-15941897 | Msa0317860:intron | 15.0% |
| !! | TAAATAATAACATCTTAACA+AGG | + | chr2_4:15942419-15942438 | Msa0317860:three_prime_UTR | 15.0% |
| !! | AAATAATAACATCTTAACAA+GGG | + | chr2_4:15942420-15942439 | Msa0317860:three_prime_UTR | 15.0% |
| !!! | ACTGTATAATATCATAATTT+TGG | + | chr2_4:15942455-15942474 | Msa0317860:three_prime_UTR | 15.0% |
| !!! | TTTTCTCTGTTTATATTGAT+AGG | + | chr2_4:15936199-15936218 | Msa0317860:five_prime_UTR | 20.0% |
| !!! | ATAATTGCTGTTTAAGATTA+AGG | + | chr2_4:15936474-15936493 | Msa0317860:intron | 20.0% |
| !!! | TAATTGCTGTTTAAGATTAA+GGG | + | chr2_4:15936475-15936494 | Msa0317860:intron | 20.0% |
| !!! | CGTATAAATCTTTTATACTA+TGG | + | chr2_4:15936502-15936521 | Msa0317860:intron | 20.0% |
| !!! | TTTAGCATTCTTTTGATTTA+TGG | + | chr2_4:15936536-15936555 | Msa0317860:intron | 20.0% |
| !!! | GCCATAATTTTATTTTATGT+AGG | - | chr2_4:15936624-15936643 | None:intergenic | 20.0% |
| !! | AATAAAGGAATTATTAGGTT+TGG | - | chr2_4:15936909-15936928 | None:intergenic | 20.0% |
| !! | TTATATTAGTAGATATAAGC+CGG | + | chr2_4:15937310-15937329 | Msa0317860:intron | 20.0% |
| !! | TATTACTCGTAAATTTAAGA+AGG | + | chr2_4:15939144-15939163 | Msa0317860:intron | 20.0% |
| !!! | TTATTTCAGTTTTCTCATTA+AGG | + | chr2_4:15939245-15939264 | Msa0317860:intron | 20.0% |
| !!! | ATCTTTAGTTACTTAAGTTT+TGG | + | chr2_4:15939277-15939296 | Msa0317860:intron | 20.0% |
| !!! | ATGATACTTTTTATCTCATA+AGG | + | chr2_4:15939528-15939547 | Msa0317860:CDS | 20.0% |
| !!! | GTTAAGTTGATTTTATAAAG+AGG | + | chr2_4:15939707-15939726 | Msa0317860:intron | 20.0% |
| !! | AATTAAATCTGTTGAAATTC+GGG | - | chr2_4:15939986-15940005 | None:intergenic | 20.0% |
| !! | TGTATTGTGTATGAATAAAA+GGG | - | chr2_4:15940259-15940278 | None:intergenic | 20.0% |
| !! | ATGTATTGTGTATGAATAAA+AGG | - | chr2_4:15940260-15940279 | None:intergenic | 20.0% |
| !! | ATTAAGATAGTCTACTAAAA+CGG | + | chr2_4:15940352-15940371 | Msa0317860:intron | 20.0% |
| !! | AATGAAATTGATTGATATTG+TGG | + | chr2_4:15940519-15940538 | Msa0317860:intron | 20.0% |
| !!! | ATCCTTTTATACAAATTCAT+AGG | - | chr2_4:15940935-15940954 | None:intergenic | 20.0% |
| !! | TAAATAGGTAAAATAGCAAT+AGG | - | chr2_4:15941674-15941693 | None:intergenic | 20.0% |
| !! | TTTATAAATAAGTGTGACAA+TGG | + | chr2_4:15941789-15941808 | Msa0317860:CDS | 20.0% |
| !! | CTTGATTGTTTCATAAAAAT+GGG | - | chr2_4:15942183-15942202 | None:intergenic | 20.0% |
| !! | CTATATCTATATACTATACA+AGG | - | chr2_4:15942564-15942583 | None:intergenic | 20.0% |
| !! | CTTGTATAGTATATAGATAT+AGG | + | chr2_4:15942562-15942581 | Msa0317860:three_prime_UTR | 20.0% |
| ! | TTTATGGTTATATGACAGAA+TGG | + | chr2_4:15936552-15936571 | Msa0317860:intron | 25.0% |
| ! | TTCTAATAGGAATAAACTAC+AGG | - | chr2_4:15936596-15936615 | None:intergenic | 25.0% |
| !!! | TATGTAGGACTTTTTCTAAT+AGG | - | chr2_4:15936609-15936628 | None:intergenic | 25.0% |
| ! | TTAACTTATCCTTACAAAAC+CGG | - | chr2_4:15936689-15936708 | None:intergenic | 25.0% |
| !! | CCATCTTAGGTTTTTATATT+GGG | - | chr2_4:15936713-15936732 | None:intergenic | 25.0% |
| !! | ACCATCTTAGGTTTTTATAT+TGG | - | chr2_4:15936714-15936733 | None:intergenic | 25.0% |
| ! | TGAAATGAGTTTATAAAGAG+TGG | + | chr2_4:15936835-15936854 | Msa0317860:intron | 25.0% |
| ! | CTTTACAAAACTCAATTGTA+AGG | - | chr2_4:15936868-15936887 | None:intergenic | 25.0% |
| ! | AATTATTAGGTTTGGATGAT+GGG | - | chr2_4:15936901-15936920 | None:intergenic | 25.0% |
| ! | TAATGAGAAACCTACATAAA+GGG | - | chr2_4:15936958-15936977 | None:intergenic | 25.0% |
| ! | ATAATGAGAAACCTACATAA+AGG | - | chr2_4:15936959-15936978 | None:intergenic | 25.0% |
| ! | ATATGAGATATATAAAGTGC+AGG | - | chr2_4:15937131-15937150 | None:intergenic | 25.0% |
| ! | TCTAACATACATAATTGTGT+TGG | + | chr2_4:15937195-15937214 | Msa0317860:intron | 25.0% |
| ! | TACAAACAAACATCTTCAAA+TGG | - | chr2_4:15937404-15937423 | None:intergenic | 25.0% |
| !! | CATAAATATTCAAGTTAACC+AGG | - | chr2_4:15937775-15937794 | None:intergenic | 25.0% |
| !!! | AAACTCTACATCTTTTTTCA+TGG | - | chr2_4:15937840-15937859 | None:intergenic | 25.0% |
| ! | TGAATGTTGTAAATTGTAGT+TGG | + | chr2_4:15937863-15937882 | Msa0317860:intron | 25.0% |
| ! | ATATTGTGTGAAAAAACGTA+AGG | - | chr2_4:15937975-15937994 | None:intergenic | 25.0% |
| ! | GAATAAGATCAAGTTAAAAG+TGG | - | chr2_4:15938398-15938417 | None:intergenic | 25.0% |
| ! | AACAAACCATAAAATCACAA+TGG | - | chr2_4:15938632-15938651 | None:intergenic | 25.0% |
| ! | CACAAAATATCTCTGATTAA+CGG | - | chr2_4:15938656-15938675 | None:intergenic | 25.0% |
| ! | ATTGTCTACTTGTATTCTTT+AGG | + | chr2_4:15938713-15938732 | Msa0317860:intron | 25.0% |
| ! | TTGTCTACTTGTATTCTTTA+GGG | + | chr2_4:15938714-15938733 | Msa0317860:intron | 25.0% |
| ! | TCATTGTTTGCATAACATTA+TGG | - | chr2_4:15938832-15938851 | None:intergenic | 25.0% |
| !!! | ATTATTTTTTACTGCACTGT+AGG | + | chr2_4:15938922-15938941 | Msa0317860:intron | 25.0% |
| ! | AAAAGCCTTTCTTTAATGAT+CGG | + | chr2_4:15938984-15939003 | Msa0317860:CDS | 25.0% |
| !! | TCTTTTGATAGATAGATAGA+AGG | - | chr2_4:15939119-15939138 | None:intergenic | 25.0% |
| ! | GTAAATTTAAGAAGGAAGTA+TGG | + | chr2_4:15939152-15939171 | Msa0317860:intron | 25.0% |
| ! | GATTGTGAATTAGAAAATGA+AGG | - | chr2_4:15939336-15939355 | None:intergenic | 25.0% |
| !!! | AAGTTGATTTTATAAAGAGG+AGG | + | chr2_4:15939710-15939729 | Msa0317860:intron | 25.0% |
| ! | ATTAAATCTGTTGAAATTCG+GGG | - | chr2_4:15939985-15940004 | None:intergenic | 25.0% |
| ! | AAATTGGAAAGAGGTTATTT+GGG | - | chr2_4:15940207-15940226 | None:intergenic | 25.0% |
| ! | AAAATTGGAAAGAGGTTATT+TGG | - | chr2_4:15940208-15940227 | None:intergenic | 25.0% |
| ! | AAAGAGAATTACATATTTGG+AGG | - | chr2_4:15940825-15940844 | None:intergenic | 25.0% |
| !! | TAAAGAACTTGTTCTTTACT+TGG | + | chr2_4:15940844-15940863 | Msa0317860:intron | 25.0% |
| ! | CTCCTATGAATTTGTATAAA+AGG | + | chr2_4:15940930-15940949 | Msa0317860:intron | 25.0% |
| !! | AGGCTTTATAATGATTAGTT+TGG | - | chr2_4:15941093-15941112 | None:intergenic | 25.0% |
| ! | ATAAAAAGTAAGGATTGCTT+AGG | - | chr2_4:15941113-15941132 | None:intergenic | 25.0% |
| ! | AAAAGCTAGCATAAAAAGTA+AGG | - | chr2_4:15941123-15941142 | None:intergenic | 25.0% |
| !!! | TTACTTTTTATGCTAGCTTT+TGG | + | chr2_4:15941122-15941141 | Msa0317860:intron | 25.0% |
| ! | CGATTTAATGAGAATATACA+CGG | - | chr2_4:15941316-15941335 | None:intergenic | 25.0% |
| !!! | AATCTATGAAACTTGTTTTG+TGG | - | chr2_4:15941410-15941429 | None:intergenic | 25.0% |
| !!! | GTAATTGTTTTAACCATAGA+AGG | + | chr2_4:15941455-15941474 | Msa0317860:intron | 25.0% |
| !!! | ATTTTGTTTCAAAAACTTGC+AGG | + | chr2_4:15941528-15941547 | Msa0317860:intron | 25.0% |
| ! | CTTATATCATAAAGATTAGG+AGG | - | chr2_4:15941756-15941775 | None:intergenic | 25.0% |
| ! | CCTAATCTTTATGATATAAG+CGG | + | chr2_4:15941756-15941775 | Msa0317860:CDS | 25.0% |
| !! | GAATTGTTATTCATCGTAAT+CGG | + | chr2_4:15941811-15941830 | Msa0317860:CDS | 25.0% |
| !! | AATTGTTATTCATCGTAATC+GGG | + | chr2_4:15941812-15941831 | Msa0317860:CDS | 25.0% |
| ! | ATACCTGTTATACAACAATA+CGG | - | chr2_4:15942009-15942028 | None:intergenic | 25.0% |
| !! | AAAATTTTACTTGCGAAAAC+AGG | - | chr2_4:15942160-15942179 | None:intergenic | 25.0% |
| ! | GCTTGATTGTTTCATAAAAA+TGG | - | chr2_4:15942184-15942203 | None:intergenic | 25.0% |
| ! | CAGATTACATTAAAGAAACA+CGG | - | chr2_4:15942214-15942233 | None:intergenic | 25.0% |
| ! | TGTTTCTTTAATGTAATCTG+TGG | + | chr2_4:15942214-15942233 | Msa0317860:intron | 25.0% |
| AGTATATTCTAGCAATGTGT+AGG | - | chr2_4:15935991-15936010 | None:intergenic | 30.0% | |
| AATTCTAATTCTGCAAAGCT+AGG | + | chr2_4:15936060-15936079 | Msa0317860:intron | 30.0% | |
| ! | TTGAATAAAGCAGTTTTCAC+CGG | - | chr2_4:15936169-15936188 | None:intergenic | 30.0% |
| ! | CTAACTTTTCTTTCCCAAAA+CGG | - | chr2_4:15936292-15936311 | None:intergenic | 30.0% |
| ! | TGATTGAAAGCATAACTACA+AGG | - | chr2_4:15936371-15936390 | None:intergenic | 30.0% |
| ACTCTTTATAAGCTCATTTC+AGG | - | chr2_4:15936646-15936665 | None:intergenic | 30.0% | |
| TGAAATGAGCTTATAAAGAG+TGG | + | chr2_4:15936645-15936664 | Msa0317860:intron | 30.0% | |
| CCCAATATAAAAACCTAAGA+TGG | + | chr2_4:15936710-15936729 | Msa0317860:intron | 30.0% | |
| ACAAAACTCAATTGTAAGGT+GGG | - | chr2_4:15936864-15936883 | None:intergenic | 30.0% | |
| TACAAAACTCAATTGTAAGG+TGG | - | chr2_4:15936865-15936884 | None:intergenic | 30.0% | |
| !! | GAGTTTTGTAAAGATGAGTT+AGG | + | chr2_4:15936875-15936894 | Msa0317860:intron | 30.0% |
| GAATTATTAGGTTTGGATGA+TGG | - | chr2_4:15936902-15936921 | None:intergenic | 30.0% | |
| CCTCCCATTGATAAAAATAA+AGG | - | chr2_4:15936924-15936943 | None:intergenic | 30.0% | |
| !!! | CCTTTATTTTTATCAATGGG+AGG | + | chr2_4:15936921-15936940 | Msa0317860:intron | 30.0% |
| TATATAAAGTGCAGGTAAAG+TGG | - | chr2_4:15937123-15937142 | None:intergenic | 30.0% | |
| AACAATTGAAAACATGAAGC+AGG | - | chr2_4:15937234-15937253 | None:intergenic | 30.0% | |
| ! | TGTTTTCAATTGTTCATGCA+TGG | + | chr2_4:15937240-15937259 | Msa0317860:intron | 30.0% |
| !! | TAATACATGGCTTGTTATTG+TGG | + | chr2_4:15937283-15937302 | Msa0317860:intron | 30.0% |
| AATAAGTTACAAGGTTGCTA+CGG | - | chr2_4:15937444-15937463 | None:intergenic | 30.0% | |
| AAGTTAAACAATCCACGTAT+AGG | - | chr2_4:15937532-15937551 | None:intergenic | 30.0% | |
| GCATATTATCATCGAACTTT+GGG | + | chr2_4:15937577-15937596 | Msa0317860:CDS | 30.0% | |
| !! | TGAATGGGTTATACAATGTA+AGG | + | chr2_4:15937635-15937654 | Msa0317860:intron | 30.0% |
| !! | GAATGGGTTATACAATGTAA+GGG | + | chr2_4:15937636-15937655 | Msa0317860:intron | 30.0% |
| TAAAAAACCATCATGATTGC+TGG | + | chr2_4:15937732-15937751 | Msa0317860:intron | 30.0% | |
| ! | TAAGGTCAGTAGATAGTTTT+TGG | + | chr2_4:15938368-15938387 | Msa0317860:intron | 30.0% |
| AGTTACTAAGACACTTTCTT+TGG | - | chr2_4:15938422-15938441 | None:intergenic | 30.0% | |
| !! | AGGTGATTTTGATATGATAG+AGG | + | chr2_4:15938515-15938534 | Msa0317860:intron | 30.0% |
| AGAGGAATTTGATATACTTG+AGG | + | chr2_4:15938533-15938552 | Msa0317860:intron | 30.0% | |
| GAGGAATTTGATATACTTGA+GGG | + | chr2_4:15938534-15938553 | Msa0317860:intron | 30.0% | |
| ! | GTACTTCCATTGTGATTTTA+TGG | + | chr2_4:15938623-15938642 | Msa0317860:intron | 30.0% |
| ! | AACTGATTCATAACTTAACC+CGG | - | chr2_4:15938773-15938792 | None:intergenic | 30.0% |
| ! | TTAGTCTTCTGATGTTTGTT+TGG | + | chr2_4:15938801-15938820 | Msa0317860:intron | 30.0% |
| CACAAAATCCAACAATATGT+GGG | - | chr2_4:15938891-15938910 | None:intergenic | 30.0% | |
| TCTTACCGATCATTAAAGAA+AGG | - | chr2_4:15938992-15939011 | None:intergenic | 30.0% | |
| TCGGTAAGATTTGAATTGTA+TGG | + | chr2_4:15939003-15939022 | Msa0317860:intron | 30.0% | |
| ATTCAGCACTCAAAATCATA+GGG | - | chr2_4:15939089-15939108 | None:intergenic | 30.0% | |
| GAAATAACAATGATTACGCT+AGG | - | chr2_4:15939232-15939251 | None:intergenic | 30.0% | |
| AATCAAGCTTAAAATGCATG+GGG | - | chr2_4:15939666-15939685 | None:intergenic | 30.0% | |
| CAATCAAGCTTAAAATGCAT+GGG | - | chr2_4:15939667-15939686 | None:intergenic | 30.0% | |
| ! | ATAACCTCTTTCCAATTTTC+AGG | + | chr2_4:15940209-15940228 | Msa0317860:intron | 30.0% |
| TTATCCTGAAAATTGGAAAG+AGG | - | chr2_4:15940216-15940235 | None:intergenic | 30.0% | |
| ATGAATAAAAGGGAAACTAC+AGG | - | chr2_4:15940249-15940268 | None:intergenic | 30.0% | |
| TTGAAAGATAGAGCTACAAA+AGG | - | chr2_4:15940501-15940520 | None:intergenic | 30.0% | |
| TTGCAGTTTAACCAAATGAA+CGG | - | chr2_4:15940613-15940632 | None:intergenic | 30.0% | |
| ATGCTCTTCCAAATATAAAG+TGG | + | chr2_4:15940712-15940731 | Msa0317860:CDS | 30.0% | |
| TGCTCTTCCAAATATAAAGT+GGG | + | chr2_4:15940713-15940732 | Msa0317860:CDS | 30.0% | |
| TCAAGAACCCACTTTATATT+TGG | - | chr2_4:15940723-15940742 | None:intergenic | 30.0% | |
| TGATGATCAAGCTCATTATA+AGG | - | chr2_4:15940798-15940817 | None:intergenic | 30.0% | |
| AGCATAGTGATATAAAGATG+TGG | + | chr2_4:15941067-15941086 | Msa0317860:intron | 30.0% | |
| CTCATATCTAGTGTGAAATT+TGG | - | chr2_4:15941241-15941260 | None:intergenic | 30.0% | |
| TTGAAATTTGTGACCTTCTA+TGG | - | chr2_4:15941471-15941490 | None:intergenic | 30.0% | |
| GTTTAATTAAGGTAAGCATC+TGG | - | chr2_4:15941574-15941593 | None:intergenic | 30.0% | |
| CCGCTTATATCATAAAGATT+AGG | - | chr2_4:15941759-15941778 | None:intergenic | 30.0% | |
| TAAAAGCAGCACATAATCAA+GGG | - | chr2_4:15942043-15942062 | None:intergenic | 30.0% | |
| ATAAAAGCAGCACATAATCA+AGG | - | chr2_4:15942044-15942063 | None:intergenic | 30.0% | |
| !!! | GTGCTGCTTTTATTCATTTA+TGG | + | chr2_4:15942051-15942070 | Msa0317860:intron | 30.0% |
| TTCGTTCGTTATAAAACACA+AGG | + | chr2_4:15942089-15942108 | Msa0317860:intron | 30.0% | |
| ATTAAAGAAACACGGCTAAT+AGG | - | chr2_4:15942206-15942225 | None:intergenic | 30.0% | |
| CTATCTCTTTCTATCATCTT+CGG | - | chr2_4:15942276-15942295 | None:intergenic | 30.0% | |
| AAAGTTATCACCTCTAAACA+TGG | + | chr2_4:15942358-15942377 | Msa0317860:three_prime_UTR | 30.0% | |
| TATTATTTACCACATCGATC+CGG | - | chr2_4:15942408-15942427 | None:intergenic | 30.0% | |
| CCTATAAAAGGACAACTAAA+TGG | - | chr2_4:15942495-15942514 | None:intergenic | 30.0% | |
| ! | CCATTTAGTTGTCCTTTTAT+AGG | + | chr2_4:15942492-15942511 | Msa0317860:three_prime_UTR | 30.0% |
| GTAACACTAACACCTATAAA+AGG | - | chr2_4:15942507-15942526 | None:intergenic | 30.0% | |
| ATAAAAAAGACCTGTTCCAG+AGG | - | chr2_4:15935923-15935942 | None:intergenic | 35.0% | |
| ! | ACATGAAGTATCAGTATCTG+TGG | + | chr2_4:15936083-15936102 | Msa0317860:intron | 35.0% |
| TTGCAAAGATGAACTAAAGC+AGG | + | chr2_4:15936108-15936127 | Msa0317860:intron | 35.0% | |
| GTTTATATTGATAGGCATCC+CGG | + | chr2_4:15936207-15936226 | Msa0317860:five_prime_UTR | 35.0% | |
| ! | TGAAAGCATAACTACAAGGA+TGG | - | chr2_4:15936367-15936386 | None:intergenic | 35.0% |
| TAGTTATGCTTTCAATCAGC+AGG | + | chr2_4:15936373-15936392 | Msa0317860:intron | 35.0% | |
| AATAAACTACAGGCGTAGAA+TGG | - | chr2_4:15936586-15936605 | None:intergenic | 35.0% | |
| GCCTACATGGAATAAAAGTA+AGG | + | chr2_4:15936810-15936829 | Msa0317860:intron | 35.0% | |
| !! | GCCTTACTTTTATTCCATGT+AGG | - | chr2_4:15936814-15936833 | None:intergenic | 35.0% |
| !!! | TCATCAGTCTTCCCTTTTTT+AGG | - | chr2_4:15937053-15937072 | None:intergenic | 35.0% |
| TGATTGCAAAGATGCAAATG+AGG | + | chr2_4:15937070-15937089 | Msa0317860:five_prime_UTR | 35.0% | |
| CAACCTTGTAACTTATTCAC+AGG | + | chr2_4:15937447-15937466 | Msa0317860:intron | 35.0% | |
| GAACCTGTGAATAAGTTACA+AGG | - | chr2_4:15937453-15937472 | None:intergenic | 35.0% | |
| TTCACAGGTTCTCATGTATT+TGG | + | chr2_4:15937462-15937481 | Msa0317860:intron | 35.0% | |
| TCACAGGTTCTCATGTATTT+GGG | + | chr2_4:15937463-15937482 | Msa0317860:intron | 35.0% | |
| CGCATATTATCATCGAACTT+TGG | + | chr2_4:15937576-15937595 | Msa0317860:CDS | 35.0% | |
| GTTAACCAGGTCATATAAAG+AGG | - | chr2_4:15937762-15937781 | None:intergenic | 35.0% | |
| ! | GATTGTAATTTGAGTTCAGC+AGG | + | chr2_4:15937905-15937924 | Msa0317860:intron | 35.0% |
| TTACCAAACATTATCCCACT+AGG | + | chr2_4:15938117-15938136 | Msa0317860:intron | 35.0% | |
| TGCAATCTTAATCAAAGTGC+TGG | + | chr2_4:15938315-15938334 | Msa0317860:CDS | 35.0% | |
| GAAATTTGCACTTTGTTCCA+TGG | + | chr2_4:15938341-15938360 | Msa0317860:CDS | 35.0% | |
| ACTTTGTTCCATGGAGAATA+AGG | + | chr2_4:15938350-15938369 | Msa0317860:CDS | 35.0% | |
| GTGTCTTAGTAACTTCTAAC+TGG | + | chr2_4:15938428-15938447 | Msa0317860:intron | 35.0% | |
| ATGCAAACAATGAATGACTG+TGG | + | chr2_4:15938839-15938858 | Msa0317860:intron | 35.0% | |
| AAAATCCAACAATATGTGGG+AGG | - | chr2_4:15938888-15938907 | None:intergenic | 35.0% | |
| GCACAAAATCCAACAATATG+TGG | - | chr2_4:15938892-15938911 | None:intergenic | 35.0% | |
| ! | AGAACATGCTCGAAAACTTT+TGG | + | chr2_4:15938949-15938968 | Msa0317860:CDS | 35.0% |
| GACAACAATGAAGCAAACTA+TGG | - | chr2_4:15939067-15939086 | None:intergenic | 35.0% | |
| CATTCAGCACTCAAAATCAT+AGG | - | chr2_4:15939090-15939109 | None:intergenic | 35.0% | |
| ! | AAAGCAATTTTCCTTTGCTG+GGG | - | chr2_4:15939198-15939217 | None:intergenic | 35.0% |
| ! | CAAAGCAATTTTCCTTTGCT+GGG | - | chr2_4:15939199-15939218 | None:intergenic | 35.0% |
| TGATTACGCTAGGAATAGAA+GGG | - | chr2_4:15939222-15939241 | None:intergenic | 35.0% | |
| ATGATTACGCTAGGAATAGA+AGG | - | chr2_4:15939223-15939242 | None:intergenic | 35.0% | |
| TCAAATACTCCCTGATCTAA+GGG | - | chr2_4:15939387-15939406 | None:intergenic | 35.0% | |
| AGTTTGGAGGAATATGAAGA+AGG | + | chr2_4:15939491-15939510 | Msa0317860:CDS | 35.0% | |
| CATAAGGTAAGTCCATTACA+AGG | + | chr2_4:15939544-15939563 | Msa0317860:intron | 35.0% | |
| ATTAGTTGAGCTCCTTGTAA+TGG | - | chr2_4:15939559-15939578 | None:intergenic | 35.0% | |
| ATTACAAGGAGCTCAACTAA+TGG | + | chr2_4:15939558-15939577 | Msa0317860:intron | 35.0% | |
| GCATCACAATCATGAATAGA+TGG | - | chr2_4:15939638-15939657 | None:intergenic | 35.0% | |
| ATCAAGCTTAAAATGCATGG+GGG | - | chr2_4:15939665-15939684 | None:intergenic | 35.0% | |
| CCAATCAAGCTTAAAATGCA+TGG | - | chr2_4:15939668-15939687 | None:intergenic | 35.0% | |
| ! | CCATGCATTTTAAGCTTGAT+TGG | + | chr2_4:15939665-15939684 | Msa0317860:intron | 35.0% |
| CTAACTCATCCTTACAAAAC+CGG | - | chr2_4:15939754-15939773 | None:intergenic | 35.0% | |
| TCTGATACCGTGTTGAAATT+CGG | - | chr2_4:15939780-15939799 | None:intergenic | 35.0% | |
| ! | GAGAAGAGTATATAAAGAGG+AGG | + | chr2_4:15939917-15939936 | Msa0317860:intron | 35.0% |
| CTAACTCATCCTTACAAAAC+CGG | - | chr2_4:15939754-15939773 | None:intergenic | 35.0% | |
| TATAAATAGGGCAAGAGTCT+TGG | + | chr2_4:15940141-15940160 | Msa0317860:intron | 35.0% | |
| AAGCTCTTGAATTCTTGGAA+GGG | - | chr2_4:15940173-15940192 | None:intergenic | 35.0% | |
| ! | TCGTGGATTATCCTGAAAAT+TGG | - | chr2_4:15940223-15940242 | None:intergenic | 35.0% |
| ! | TACTCAACAAGCATTGCTTA+TGG | - | chr2_4:15940575-15940594 | None:intergenic | 35.0% |
| ATCTTTATCAGCCGTTCATT+TGG | + | chr2_4:15940599-15940618 | Msa0317860:intron | 35.0% | |
| ACTACTTGGCTGTTAATACT+AGG | + | chr2_4:15940679-15940698 | Msa0317860:intron | 35.0% | |
| !!! | TTAATACAGCTGCTTTTGCA+AGG | - | chr2_4:15940746-15940765 | None:intergenic | 35.0% |
| AAAGCAGCTGTATTAAGACA+CGG | + | chr2_4:15940750-15940769 | Msa0317860:CDS | 35.0% | |
| AAGGATAACTCCAAAACTGT+AGG | + | chr2_4:15940992-15941011 | Msa0317860:intron | 35.0% | |
| AGGATAACTCCAAAACTGTA+GGG | + | chr2_4:15940993-15941012 | Msa0317860:intron | 35.0% | |
| ! | ATCACTTATCCCTACAGTTT+TGG | - | chr2_4:15941005-15941024 | None:intergenic | 35.0% |
| TATCACTATGCTTCAACTTG+AGG | - | chr2_4:15941059-15941078 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTGGGGTCCAATCT+TGG | + | chr2_4:15941186-15941205 | Msa0317860:intron | 35.0% |
| !!! | TTTTTTTGGGGTCCAATCTT+GGG | + | chr2_4:15941187-15941206 | Msa0317860:intron | 35.0% |
| TGGGCATTTGTAAGACAAAA+CGG | - | chr2_4:15941213-15941232 | None:intergenic | 35.0% | |
| AGTGTGAAATTTGGCACATT+GGG | - | chr2_4:15941232-15941251 | None:intergenic | 35.0% | |
| TAGTGTGAAATTTGGCACAT+TGG | - | chr2_4:15941233-15941252 | None:intergenic | 35.0% | |
| AATCTCAACAAATACCTCTC+AGG | - | chr2_4:15941272-15941291 | None:intergenic | 35.0% | |
| TGAAAATGTGCAATGCATCT+TGG | + | chr2_4:15941381-15941400 | Msa0317860:intron | 35.0% | |
| TGTTTCAAAAACTTGCAGGA+CGG | + | chr2_4:15941532-15941551 | Msa0317860:intron | 35.0% | |
| ! | TTGGGCAAAGCGTTTAATTA+AGG | - | chr2_4:15941585-15941604 | None:intergenic | 35.0% |
| TGGTTACTATTTACTTTCGC+AGG | + | chr2_4:15942234-15942253 | Msa0317860:intron | 35.0% | |
| GGTTACTATTTACTTTCGCA+GGG | + | chr2_4:15942235-15942254 | Msa0317860:intron | 35.0% | |
| !! | GTTTTGGTATGACTGTATAC+TGG | + | chr2_4:15942314-15942333 | Msa0317860:three_prime_UTR | 35.0% |
| AACAACATAGCCATGTTTAG+AGG | - | chr2_4:15942371-15942390 | None:intergenic | 35.0% | |
| !!! | GCTATGTTGTTTTCACTTTG+AGG | + | chr2_4:15942380-15942399 | Msa0317860:three_prime_UTR | 35.0% |
| ! | GCACAATCATTTGAGATTGA+AGG | - | chr2_4:15942610-15942629 | None:intergenic | 35.0% |
| TTCCACTCCTTTCTATGTAC+CGG | + | chr2_4:15936147-15936166 | Msa0317860:five_prime_UTR | 40.0% | |
| ! | GTTTTCACCGGTACATAGAA+AGG | - | chr2_4:15936157-15936176 | None:intergenic | 40.0% |
| ATCAGTTGCAAGGATAATCC+GGG | - | chr2_4:15936228-15936247 | None:intergenic | 40.0% | |
| CATCAGTTGCAAGGATAATC+CGG | - | chr2_4:15936229-15936248 | None:intergenic | 40.0% | |
| !! | AAAACCGGTTTGTAAGGTGA+GGG | - | chr2_4:15936674-15936693 | None:intergenic | 40.0% |
| !! | CCTTACAAAACCGGTTTGTA+AGG | - | chr2_4:15936680-15936699 | None:intergenic | 40.0% |
| !! | CCTTACAAACCGGTTTTGTA+AGG | + | chr2_4:15936677-15936696 | Msa0317860:intron | 40.0% |
| ! | CTTTTATTCCATGTAGGCCT+TGG | - | chr2_4:15936808-15936827 | None:intergenic | 40.0% |
| ATCAAGTCCTCCCTTTATGT+AGG | + | chr2_4:15936945-15936964 | Msa0317860:intron | 40.0% | |
| TGAGAAACCTACATAAAGGG+AGG | - | chr2_4:15936955-15936974 | None:intergenic | 40.0% | |
| ! | TCTTGTTTATCTGCAGATGC+TGG | + | chr2_4:15937015-15937034 | Msa0317860:intron | 40.0% |
| GTGTCAGATGGCCTAAAAAA+GGG | + | chr2_4:15937039-15937058 | Msa0317860:five_prime_UTR | 40.0% | |
| ATTCCCATGTTTCAAACAGC+CGG | - | chr2_4:15937332-15937351 | None:intergenic | 40.0% | |
| AATCGCTTCTTTCAGTGCAT+CGG | - | chr2_4:15937491-15937510 | None:intergenic | 40.0% | |
| GCAGAACTATATCCTATACG+TGG | + | chr2_4:15937517-15937536 | Msa0317860:CDS | 40.0% | |
| ACTGGCTGGAATAATCTGAA+TGG | + | chr2_4:15937619-15937638 | Msa0317860:CDS | 40.0% | |
| CTGGCTGGAATAATCTGAAT+GGG | + | chr2_4:15937620-15937639 | Msa0317860:CDS | 40.0% | |
| CAAACATTATCCCACTAGGT+GGG | + | chr2_4:15938121-15938140 | Msa0317860:intron | 40.0% | |
| AAACATTATCCCACTAGGTG+GGG | + | chr2_4:15938122-15938141 | Msa0317860:intron | 40.0% | |
| TTACTTTCACCAGATTGTGC+CGG | + | chr2_4:15938227-15938246 | Msa0317860:intron | 40.0% | |
| ATTCGGAACTCCAGTTACTA+TGG | - | chr2_4:15938262-15938281 | None:intergenic | 40.0% | |
| TAACTGGAGTTCCGAATTCA+GGG | + | chr2_4:15938265-15938284 | Msa0317860:CDS | 40.0% | |
| !! | ATCTTAATCAAAGTGCTGGC+TGG | + | chr2_4:15938319-15938338 | Msa0317860:CDS | 40.0% |
| TCTACTGACCTTATTCTCCA+TGG | - | chr2_4:15938361-15938380 | None:intergenic | 40.0% | |
| ACAGCAAACTGACAGTGAAA+CGG | - | chr2_4:15938742-15938761 | None:intergenic | 40.0% | |
| !!! | CAGTTTGCTGTCTTTTGAAC+CGG | + | chr2_4:15938751-15938770 | Msa0317860:intron | 40.0% |
| !!! | AGTTTGCTGTCTTTTGAACC+GGG | + | chr2_4:15938752-15938771 | Msa0317860:intron | 40.0% |
| ! | AAGCAATTTTCCTTTGCTGG+GGG | - | chr2_4:15939197-15939216 | None:intergenic | 40.0% |
| ! | GCAAAGCAATTTTCCTTTGC+TGG | - | chr2_4:15939200-15939219 | None:intergenic | 40.0% |
| GTCAAATACTCCCTGATCTA+AGG | - | chr2_4:15939388-15939407 | None:intergenic | 40.0% | |
| AATATGAAGAAGGCAAGCTC+TGG | + | chr2_4:15939501-15939520 | Msa0317860:CDS | 40.0% | |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr2_4:15939752-15939771 | Msa0317860:intron | 40.0% |
| TGATACCGTGTTGAAATTCG+GGG | - | chr2_4:15939778-15939797 | None:intergenic | 40.0% | |
| CTGATACCGTGTTGAAATTC+GGG | - | chr2_4:15939779-15939798 | None:intergenic | 40.0% | |
| ATCAGAGCTTGTCGAATTCA+AGG | + | chr2_4:15939794-15939813 | Msa0317860:intron | 40.0% | |
| TCAGAGCTTGTCGAATTCAA+GGG | + | chr2_4:15939795-15939814 | Msa0317860:intron | 40.0% | |
| GAAAAACCCAAGTTCCACAT+CGG | + | chr2_4:15939879-15939898 | Msa0317860:intron | 40.0% | |
| ATCTATCCGATGTGGAACTT+GGG | - | chr2_4:15939888-15939907 | None:intergenic | 40.0% | |
| TATCTATCCGATGTGGAACT+TGG | - | chr2_4:15939889-15939908 | None:intergenic | 40.0% | |
| ! | AGAGTCTTATCTATCCGATG+TGG | - | chr2_4:15939896-15939915 | None:intergenic | 40.0% |
| CAAGCTCTTGAATTCTTGGA+AGG | - | chr2_4:15940174-15940193 | None:intergenic | 40.0% | |
| CTTCCAAGAATTCAAGAGCT+TGG | + | chr2_4:15940172-15940191 | Msa0317860:intron | 40.0% | |
| AGACCAAGCTCTTGAATTCT+TGG | - | chr2_4:15940178-15940197 | None:intergenic | 40.0% | |
| TGGAAAGAGGTTATTTGGGA+GGG | - | chr2_4:15940203-15940222 | None:intergenic | 40.0% | |
| TTGGAAAGAGGTTATTTGGG+AGG | - | chr2_4:15940204-15940223 | None:intergenic | 40.0% | |
| TATCCACGTGCATTACAAAG+TGG | - | chr2_4:15940468-15940487 | None:intergenic | 40.0% | |
| TGATATTGTGGCTCAGAAGT+TGG | + | chr2_4:15940531-15940550 | Msa0317860:intron | 40.0% | |
| !! | GATTTTAGTGCTGCACTACT+TGG | + | chr2_4:15940665-15940684 | Msa0317860:intron | 40.0% |
| AAGCAGCTGTATTAAGACAC+GGG | + | chr2_4:15940751-15940770 | Msa0317860:CDS | 40.0% | |
| TTCAACTTGAGGAGGAGAAT+CGG | - | chr2_4:15941048-15941067 | None:intergenic | 40.0% | |
| CACACTAGATATGAGATCCT+TGG | + | chr2_4:15941246-15941265 | Msa0317860:intron | 40.0% | |
| CGCTATAAACCTCATGTGAT+TGG | + | chr2_4:15941334-15941353 | Msa0317860:intron | 40.0% | |
| ACAAGCAAACCAATCACATG+AGG | - | chr2_4:15941346-15941365 | None:intergenic | 40.0% | |
| AACATGGCATCCATGATGTT+GGG | - | chr2_4:15941603-15941622 | None:intergenic | 40.0% | |
| AAACATGGCATCCATGATGT+TGG | - | chr2_4:15941604-15941623 | None:intergenic | 40.0% | |
| AACATCATGGATGCCATGTT+TGG | + | chr2_4:15941603-15941622 | Msa0317860:CDS | 40.0% | |
| GATGTGCTACAAACCAAACA+TGG | - | chr2_4:15941619-15941638 | None:intergenic | 40.0% | |
| TCATCTCATAGCTGCACAAT+TGG | + | chr2_4:15941721-15941740 | Msa0317860:intron | 40.0% | |
| CATCTCATAGCTGCACAATT+GGG | + | chr2_4:15941722-15941741 | Msa0317860:intron | 40.0% | |
| !! | TACTGACTTGTCATTGCTTC+AGG | + | chr2_4:15941935-15941954 | Msa0317860:intron | 40.0% |
| AGGCCGTATTGTTGTATAAC+AGG | + | chr2_4:15942003-15942022 | Msa0317860:CDS | 40.0% | |
| ATTTACTTTCGCAGGGTAAC+TGG | + | chr2_4:15942242-15942261 | Msa0317860:intron | 40.0% | |
| ! | GCAGTCACACAAATGAGTTT+TGG | + | chr2_4:15942298-15942317 | Msa0317860:three_prime_UTR | 40.0% |
| !!! | TTGTTTTCACTTTGAGGTGC+CGG | + | chr2_4:15942386-15942405 | Msa0317860:three_prime_UTR | 40.0% |
| AAAAAGACCTGTTCCAGAGG+TGG | - | chr2_4:15935920-15935939 | None:intergenic | 45.0% | |
| CGGATTATCCTTGCAACTGA+TGG | + | chr2_4:15936227-15936246 | Msa0317860:five_prime_UTR | 45.0% | |
| AAACTACAGGCGTAGAATGG+CGG | - | chr2_4:15936583-15936602 | None:intergenic | 45.0% | |
| !! | AAACCGGTTTGTAAGGTGAG+GGG | - | chr2_4:15936673-15936692 | None:intergenic | 45.0% |
| !! | CAAAACCGGTTTGTAAGGTG+AGG | - | chr2_4:15936675-15936694 | None:intergenic | 45.0% |
| ! | AGGAGCTCTGATACCATCTT+AGG | - | chr2_4:15936726-15936745 | None:intergenic | 45.0% |
| GGGTGTATTGGGAAAAACCA+AGG | + | chr2_4:15936788-15936807 | Msa0317860:intron | 45.0% | |
| CGTGTCAGATGGCCTAAAAA+AGG | + | chr2_4:15937038-15937057 | Msa0317860:five_prime_UTR | 45.0% | |
| ! | TAAGCCGGCTGTTTGAAACA+TGG | + | chr2_4:15937325-15937344 | Msa0317860:intron | 45.0% |
| ! | AAGCCGGCTGTTTGAAACAT+GGG | + | chr2_4:15937326-15937345 | Msa0317860:intron | 45.0% |
| ATCGCTTCTTTCAGTGCATC+GGG | - | chr2_4:15937490-15937509 | None:intergenic | 45.0% | |
| !! | CGAACTTTGGGATATGACAC+TGG | + | chr2_4:15937589-15937608 | Msa0317860:CDS | 45.0% |
| ! | TATGACACTGGTCTCTCTAC+TGG | + | chr2_4:15937601-15937620 | Msa0317860:CDS | 45.0% |
| GCTGACCTCTTTATATGACC+TGG | + | chr2_4:15937754-15937773 | Msa0317860:intron | 45.0% | |
| CCACCTAGTGGGATAATGTT+TGG | - | chr2_4:15938123-15938142 | None:intergenic | 45.0% | |
| CCAAACATTATCCCACTAGG+TGG | + | chr2_4:15938120-15938139 | Msa0317860:intron | 45.0% | |
| AACATTATCCCACTAGGTGG+GGG | + | chr2_4:15938123-15938142 | Msa0317860:intron | 45.0% | |
| TACTTTCACCAGATTGTGCC+GGG | + | chr2_4:15938228-15938247 | Msa0317860:intron | 45.0% | |
| GTTACTATGGTCAGTTCTCC+CGG | - | chr2_4:15938249-15938268 | None:intergenic | 45.0% | |
| GGAGAACTGACCATAGTAAC+TGG | + | chr2_4:15938249-15938268 | Msa0317860:CDS | 45.0% | |
| GTAACTGGAGTTCCGAATTC+AGG | + | chr2_4:15938264-15938283 | Msa0317860:CDS | 45.0% | |
| CACTCACTCTTCCCTGAATT+CGG | - | chr2_4:15938279-15938298 | None:intergenic | 45.0% | |
| CATTGCCTCCCACATATTGT+TGG | + | chr2_4:15938880-15938899 | Msa0317860:intron | 45.0% | |
| ! | AGCAATTTTCCTTTGCTGGG+GGG | - | chr2_4:15939196-15939215 | None:intergenic | 45.0% |
| TGTATCGAGACCCTTAGATC+AGG | + | chr2_4:15939374-15939393 | Msa0317860:intron | 45.0% | |
| GTATCGAGACCCTTAGATCA+GGG | + | chr2_4:15939375-15939394 | Msa0317860:intron | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr2_4:15939745-15939764 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr2_4:15939742-15939761 | Msa0317860:intron | 45.0% |
| TTAGGCCCCGAATTTCAACA+CGG | + | chr2_4:15939770-15939789 | Msa0317860:intron | 45.0% | |
| ! | CTTGGTGCGTGAATAGGTTT+AGG | - | chr2_4:15939824-15939843 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr2_4:15939745-15939764 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr2_4:15939742-15939761 | Msa0317860:intron | 45.0% |
| AGCAGCTGTATTAAGACACG+GGG | + | chr2_4:15940752-15940771 | Msa0317860:CDS | 45.0% | |
| CACTATGCTTCAACTTGAGG+AGG | - | chr2_4:15941056-15941075 | None:intergenic | 45.0% | |
| AAGACAAAACGGCCCAAGAT+TGG | - | chr2_4:15941202-15941221 | None:intergenic | 45.0% | |
| AACAAATACCTCTCAGGCCA+AGG | - | chr2_4:15941266-15941285 | None:intergenic | 45.0% | |
| AAACGCTTTGCCCAACATCA+TGG | + | chr2_4:15941590-15941609 | Msa0317860:CDS | 45.0% | |
| !! | TTTGGTTTGTAGCACATCCC+AGG | + | chr2_4:15941621-15941640 | Msa0317860:CDS | 45.0% |
| CCATATATACCAACCTGCCT+GGG | - | chr2_4:15941641-15941660 | None:intergenic | 45.0% | |
| TCATAGCTGCACAATTGGGT+TGG | + | chr2_4:15941726-15941745 | Msa0317860:intron | 45.0% | |
| CATAGCTGCACAATTGGGTT+GGG | + | chr2_4:15941727-15941746 | Msa0317860:intron | 45.0% | |
| ! | CATTGCTTCAGGTTTGTGTC+CGG | + | chr2_4:15941946-15941965 | Msa0317860:intron | 45.0% |
| TGTCCGGAAGGTGAGAAATA+AGG | + | chr2_4:15941962-15941981 | Msa0317860:CDS | 45.0% | |
| ! | CGACCTTATTTCTCACCTTC+CGG | - | chr2_4:15941968-15941987 | None:intergenic | 45.0% |
| AAGGTGAGAAATAAGGTCGC+AGG | + | chr2_4:15941969-15941988 | Msa0317860:CDS | 45.0% | |
| AGGTGAGAAATAAGGTCGCA+GGG | + | chr2_4:15941970-15941989 | Msa0317860:CDS | 45.0% | |
| AATAAGGTCGCAGGGACAAT+AGG | + | chr2_4:15941978-15941997 | Msa0317860:CDS | 45.0% | |
| AGCGTATGAGTGCCTATTGA+AGG | + | chr2_4:15942134-15942153 | Msa0317860:intron | 45.0% | |
| TGCGAAAACAGGCCTTCAAT+AGG | - | chr2_4:15942149-15942168 | None:intergenic | 45.0% | |
| TGACTGTATACTGGTCAGCA+TGG | + | chr2_4:15942323-15942342 | Msa0317860:three_prime_UTR | 45.0% | |
| !! | ATAAAAAATGATTAATTATT+TGG | + | chr2_4:15938023-15938042 | Msa0317860:intron | 5.0% |
| !!! | AGATTTTTTTTTTTTTTTTT+TGG | + | chr2_4:15941173-15941192 | Msa0317860:intron | 5.0% |
| !!! | GATTTTTTTTTTTTTTTTTT+GGG | + | chr2_4:15941174-15941193 | Msa0317860:intron | 5.0% |
| !!! | ATTTTTTTTTTTTTTTTTTG+GGG | + | chr2_4:15941175-15941194 | Msa0317860:intron | 5.0% |
| CACCGGTACATAGAAAGGAG+TGG | - | chr2_4:15936152-15936171 | None:intergenic | 50.0% | |
| GTATCAGAGCTCCTGTCGAT+CGG | + | chr2_4:15936732-15936751 | Msa0317860:intron | 50.0% | |
| TATCAGAGCTCCTGTCGATC+GGG | + | chr2_4:15936733-15936752 | Msa0317860:intron | 50.0% | |
| GGGAAAAACCAAGGCCTACA+TGG | + | chr2_4:15936797-15936816 | Msa0317860:intron | 50.0% | |
| TCGCTTCTTTCAGTGCATCG+GGG | - | chr2_4:15937489-15937508 | None:intergenic | 50.0% | |
| AGGTCAGCCAGCAATCATGA+TGG | - | chr2_4:15937742-15937761 | None:intergenic | 50.0% | |
| ACATTATCCCACTAGGTGGG+GGG | + | chr2_4:15938124-15938143 | Msa0317860:intron | 50.0% | |
| CGAATTCAGGGAAGAGTGAG+TGG | + | chr2_4:15938277-15938296 | Msa0317860:CDS | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr2_4:15939740-15939759 | None:intergenic | 50.0% |
| GGTGCGTGAATAGGTTTAGG+CGG | - | chr2_4:15939821-15939840 | None:intergenic | 50.0% | |
| !! | TTTGGGCTTGGTGCGTGAAT+AGG | - | chr2_4:15939830-15939849 | None:intergenic | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr2_4:15939740-15939759 | None:intergenic | 50.0% |
| GCTCCACTTTGTAATGCACG+TGG | + | chr2_4:15940462-15940481 | Msa0317860:intron | 50.0% | |
| TATGAGATCCTTGGCCTGAG+AGG | + | chr2_4:15941255-15941274 | Msa0317860:intron | 50.0% | |
| !! | CCCAGGCAGGTTGGTATATA+TGG | + | chr2_4:15941638-15941657 | Msa0317860:intron | 50.0% |
| GCCATATATACCAACCTGCC+TGG | - | chr2_4:15941642-15941661 | None:intergenic | 50.0% | |
| TCATCGTAATCGGGATCCTG+AGG | + | chr2_4:15941821-15941840 | Msa0317860:CDS | 50.0% | |
| CTCACCTGCACTTGATCAAC+AGG | - | chr2_4:15941852-15941871 | None:intergenic | 50.0% | |
| GTGGATCGCCATCAGTTGCA+AGG | - | chr2_4:15936238-15936257 | None:intergenic | 55.0% | |
| !! | AGGAGCTTGCACGCCGTTTT+GGG | + | chr2_4:15936276-15936295 | Msa0317860:five_prime_UTR | 55.0% |
| GCACCCCTCACCTTACAAAC+CGG | + | chr2_4:15936667-15936686 | Msa0317860:intron | 55.0% | |
| ! | ACACTGGTCTCTCTACTGGC+TGG | + | chr2_4:15937605-15937624 | Msa0317860:CDS | 55.0% |
| CACAATACCCCCCACCTAGT+GGG | - | chr2_4:15938134-15938153 | None:intergenic | 55.0% | |
| TCACAATACCCCCCACCTAG+TGG | - | chr2_4:15938135-15938154 | None:intergenic | 55.0% | |
| TCAGTTCTCCCGGCACAATC+TGG | - | chr2_4:15938239-15938258 | None:intergenic | 55.0% | |
| ACTCATCCGCTCAGCGTCTT+CGG | - | chr2_4:15939474-15939493 | None:intergenic | 55.0% | |
| AGACGCTGAGCGGATGAGTT+TGG | + | chr2_4:15939475-15939494 | Msa0317860:CDS | 55.0% | |
| GCACTCCTCACCTTACAAGC+CGG | + | chr2_4:15939732-15939751 | Msa0317860:intron | 55.0% | |
| !! | CACCAAGCCCAAAGAGTGCT+GGG | + | chr2_4:15939837-15939856 | Msa0317860:intron | 55.0% |
| GCACTCCTCACCTTACAAGC+CGG | + | chr2_4:15939732-15939751 | Msa0317860:intron | 55.0% | |
| AGGGAAACTACAGGCTGTCG+TGG | - | chr2_4:15940240-15940259 | None:intergenic | 55.0% | |
| GTATTAAGACACGGGGTGCG+TGG | + | chr2_4:15940759-15940778 | Msa0317860:CDS | 55.0% | |
| GTTTGTAGCACATCCCAGGC+AGG | + | chr2_4:15941625-15941644 | Msa0317860:CDS | 55.0% | |
| CTGCACTTGATCAACAGGCC+CGG | - | chr2_4:15941847-15941866 | None:intergenic | 55.0% | |
| ! | GCTTCAGGTTTGTGTCCGGA+AGG | + | chr2_4:15941950-15941969 | Msa0317860:intron | 55.0% |
| !! | TTTGAGGTGCCGGATCGATG+TGG | + | chr2_4:15942396-15942415 | Msa0317860:three_prime_UTR | 55.0% |
| ! | GCAACTGATGGCGATCCACC+TGG | + | chr2_4:15936239-15936258 | Msa0317860:five_prime_UTR | 60.0% |
| CGATCCACCTGGTCAAGCCT+TGG | + | chr2_4:15936250-15936269 | Msa0317860:five_prime_UTR | 60.0% | |
| TCAGCCAAGGCTTGACCAGG+TGG | - | chr2_4:15936257-15936276 | None:intergenic | 60.0% | |
| ACCTGGTCAAGCCTTGGCTG+AGG | + | chr2_4:15936256-15936275 | Msa0317860:five_prime_UTR | 60.0% | |
| TCCTCAGCCAAGGCTTGACC+AGG | - | chr2_4:15936260-15936279 | None:intergenic | 60.0% | |
| ! | GAGGAGCTTGCACGCCGTTT+TGG | + | chr2_4:15936275-15936294 | Msa0317860:five_prime_UTR | 60.0% |
| CCACCAAGCCCCATAGTGCT+GGG | + | chr2_4:15936756-15936775 | Msa0317860:intron | 60.0% | |
| ACACCCAGCACTATGGGGCT+TGG | - | chr2_4:15936762-15936781 | None:intergenic | 60.0% | |
| CCCTCACACCCAGCACTATG+GGG | - | chr2_4:15936767-15936786 | None:intergenic | 60.0% | |
| ! | CCCCATAGTGCTGGGTGTGA+GGG | + | chr2_4:15936764-15936783 | Msa0317860:intron | 60.0% |
| CCCCTCACACCCAGCACTAT+GGG | - | chr2_4:15936768-15936787 | None:intergenic | 60.0% | |
| ! | CCCATAGTGCTGGGTGTGAG+GGG | + | chr2_4:15936765-15936784 | Msa0317860:intron | 60.0% |
| ! | CCATAGTGCTGGGTGTGAGG+GGG | + | chr2_4:15936766-15936785 | Msa0317860:intron | 60.0% |
| ! | CATAGTGCTGGGTGTGAGGG+GGG | + | chr2_4:15936767-15936786 | Msa0317860:intron | 60.0% |
| ! | ATAGTGCTGGGTGTGAGGGG+GGG | + | chr2_4:15936768-15936787 | Msa0317860:intron | 60.0% |
| ! | GGTGTGAGGGGGGGTGTATT+GGG | + | chr2_4:15936777-15936796 | Msa0317860:intron | 60.0% |
| GCAGATGCTGGCGTGTCAGA+TGG | + | chr2_4:15937027-15937046 | Msa0317860:intron | 60.0% | |
| TGCACTGTTCCCCCCAGCAA+AGG | + | chr2_4:15939184-15939203 | Msa0317860:intron | 60.0% | |
| CGCTGAGCGGATGAGTTTGG+AGG | + | chr2_4:15939478-15939497 | Msa0317860:CDS | 60.0% | |
| ! | GCACCAAGCCCAAAGAGTGC+TGG | + | chr2_4:15939836-15939855 | Msa0317860:intron | 60.0% |
| CCTCACGCCCAGCACTCTTT+GGG | - | chr2_4:15939847-15939866 | None:intergenic | 60.0% | |
| !! | CCAAAGAGTGCTGGGCGTGA+GGG | + | chr2_4:15939845-15939864 | Msa0317860:intron | 60.0% |
| !! | CAAAGAGTGCTGGGCGTGAG+GGG | + | chr2_4:15939846-15939865 | Msa0317860:intron | 60.0% |
| !! | AAAGAGTGCTGGGCGTGAGG+GGG | + | chr2_4:15939847-15939866 | Msa0317860:intron | 60.0% |
| GTAGCACATCCCAGGCAGGT+TGG | + | chr2_4:15941629-15941648 | Msa0317860:intron | 60.0% | |
| CGTAATCGGGATCCTGAGGC+CGG | + | chr2_4:15941825-15941844 | Msa0317860:CDS | 60.0% | |
| GTAATCGGGATCCTGAGGCC+GGG | + | chr2_4:15941826-15941845 | Msa0317860:CDS | 60.0% | |
| CGGGCCTGTTGATCAAGTGC+AGG | + | chr2_4:15941845-15941864 | Msa0317860:CDS | 60.0% | |
| GGTCGCAGGGACAATAGGTG+AGG | + | chr2_4:15941983-15942002 | Msa0317860:CDS | 60.0% | |
| GCGTGCAAGCTCCTCAGCCA+AGG | - | chr2_4:15936270-15936289 | None:intergenic | 65.0% | |
| GCCACCAAGCCCCATAGTGC+TGG | + | chr2_4:15936755-15936774 | Msa0317860:intron | 65.0% | |
| CCCAGCACTATGGGGCTTGG+TGG | - | chr2_4:15936759-15936778 | None:intergenic | 65.0% | |
| ! | GCCCCATAGTGCTGGGTGTG+AGG | + | chr2_4:15936763-15936782 | Msa0317860:intron | 65.0% |
| CCCCCTCACACCCAGCACTA+TGG | - | chr2_4:15936769-15936788 | None:intergenic | 65.0% | |
| ! | GGGTGTGAGGGGGGGTGTAT+TGG | + | chr2_4:15936776-15936795 | Msa0317860:intron | 65.0% |
| GCTACGCCGAAGACGCTGAG+CGG | + | chr2_4:15939465-15939484 | Msa0317860:intron | 65.0% | |
| CGCCCAGCACTCTTTGGGCT+TGG | - | chr2_4:15939842-15939861 | None:intergenic | 65.0% | |
| !! | CCCAAAGAGTGCTGGGCGTG+AGG | + | chr2_4:15939844-15939863 | Msa0317860:intron | 65.0% |
| CCCTCACGCCCAGCACTCTT+TGG | - | chr2_4:15939848-15939867 | None:intergenic | 65.0% | |
| !! | AAGAGTGCTGGGCGTGAGGG+GGG | + | chr2_4:15939848-15939867 | Msa0317860:intron | 65.0% |
| ! | TGGGCGTGAGGGGGGTGTAT+TGG | + | chr2_4:15939856-15939875 | Msa0317860:intron | 65.0% |
| ! | GGGCGTGAGGGGGGTGTATT+GGG | + | chr2_4:15939857-15939876 | Msa0317860:intron | 65.0% |
| TGATCAACAGGCCCGGCCTC+AGG | - | chr2_4:15941840-15941859 | None:intergenic | 65.0% | |
| !! | GGCTTGGTGGCCCGATCGAC+AGG | - | chr2_4:15936746-15936765 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 15935916 | 15942664 | 15935916 | ID=Msa0317860;Name=Msa0317860 |
| chr2_4 | mRNA | 15935916 | 15942664 | 15935916 | ID=Msa0317860-mRNA-1;Parent=Msa0317860;Name=Msa0317860-mRNA-1;_AED=0.10;_eAED=0.10;_QI=420|1|1|1|0.90|0.75|12|369|308 |
| chr2_4 | exon | 15935916 | 15936077 | 15935916 | ID=Msa0317860-mRNA-1:exon:5981;Parent=Msa0317860-mRNA-1 |
| chr2_4 | exon | 15936116 | 15936306 | 15936116 | ID=Msa0317860-mRNA-1:exon:5982;Parent=Msa0317860-mRNA-1 |
| chr2_4 | exon | 15937031 | 15937091 | 15937031 | ID=Msa0317860-mRNA-1:exon:5983;Parent=Msa0317860-mRNA-1 |
| chr2_4 | exon | 15937469 | 15937651 | 15937469 | ID=Msa0317860-mRNA-1:exon:5984;Parent=Msa0317860-mRNA-1 |
| chr2_4 | exon | 15938240 | 15938371 | 15938240 | ID=Msa0317860-mRNA-1:exon:5985;Parent=Msa0317860-mRNA-1 |
| chr2_4 | exon | 15938944 | 15939005 | 15938944 | ID=Msa0317860-mRNA-1:exon:5986;Parent=Msa0317860-mRNA-1 |
| chr2_4 | exon | 15939466 | 15939549 | 15939466 | ID=Msa0317860-mRNA-1:exon:5987;Parent=Msa0317860-mRNA-1 |
| chr2_4 | exon | 15940701 | 15940832 | 15940701 | ID=Msa0317860-mRNA-1:exon:5988;Parent=Msa0317860-mRNA-1 |
| chr2_4 | exon | 15941550 | 15941646 | 15941550 | ID=Msa0317860-mRNA-1:exon:5989;Parent=Msa0317860-mRNA-1 |
| chr2_4 | exon | 15941732 | 15941866 | 15941732 | ID=Msa0317860-mRNA-1:exon:5990;Parent=Msa0317860-mRNA-1 |
| chr2_4 | exon | 15941957 | 15942024 | 15941957 | ID=Msa0317860-mRNA-1:exon:5991;Parent=Msa0317860-mRNA-1 |
| chr2_4 | exon | 15942256 | 15942664 | 15942256 | ID=Msa0317860-mRNA-1:exon:5992;Parent=Msa0317860-mRNA-1 |
| chr2_4 | five_prime_UTR | 15935916 | 15936077 | 15935916 | ID=Msa0317860-mRNA-1:five_prime_utr;Parent=Msa0317860-mRNA-1 |
| chr2_4 | five_prime_UTR | 15936116 | 15936306 | 15936116 | ID=Msa0317860-mRNA-1:five_prime_utr;Parent=Msa0317860-mRNA-1 |
| chr2_4 | five_prime_UTR | 15937031 | 15937091 | 15937031 | ID=Msa0317860-mRNA-1:five_prime_utr;Parent=Msa0317860-mRNA-1 |
| chr2_4 | five_prime_UTR | 15937469 | 15937474 | 15937469 | ID=Msa0317860-mRNA-1:five_prime_utr;Parent=Msa0317860-mRNA-1 |
| chr2_4 | CDS | 15937475 | 15937651 | 15937475 | ID=Msa0317860-mRNA-1:cds;Parent=Msa0317860-mRNA-1 |
| chr2_4 | CDS | 15938240 | 15938371 | 15938240 | ID=Msa0317860-mRNA-1:cds;Parent=Msa0317860-mRNA-1 |
| chr2_4 | CDS | 15938944 | 15939005 | 15938944 | ID=Msa0317860-mRNA-1:cds;Parent=Msa0317860-mRNA-1 |
| chr2_4 | CDS | 15939466 | 15939549 | 15939466 | ID=Msa0317860-mRNA-1:cds;Parent=Msa0317860-mRNA-1 |
| chr2_4 | CDS | 15940701 | 15940832 | 15940701 | ID=Msa0317860-mRNA-1:cds;Parent=Msa0317860-mRNA-1 |
| chr2_4 | CDS | 15941550 | 15941646 | 15941550 | ID=Msa0317860-mRNA-1:cds;Parent=Msa0317860-mRNA-1 |
| chr2_4 | CDS | 15941732 | 15941866 | 15941732 | ID=Msa0317860-mRNA-1:cds;Parent=Msa0317860-mRNA-1 |
| chr2_4 | CDS | 15941957 | 15942024 | 15941957 | ID=Msa0317860-mRNA-1:cds;Parent=Msa0317860-mRNA-1 |
| chr2_4 | CDS | 15942256 | 15942295 | 15942256 | ID=Msa0317860-mRNA-1:cds;Parent=Msa0317860-mRNA-1 |
| chr2_4 | three_prime_UTR | 15942296 | 15942664 | 15942296 | ID=Msa0317860-mRNA-1:three_prime_utr;Parent=Msa0317860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
