AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0056690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0056690 MtrunA17_Chr1g0147751 93.856 1058 53 4 1 1046 1 1058 0.0 1947
Msa0056690 MtrunA17_Chr1g0147811 91.623 382 29 1 201 579 6 387 0.0 730
Msa0056690 MtrunA17_Chr2g0311081 57.202 486 162 5 235 680 9 488 1.04e-178 532
Msa0056690 MtrunA17_Chr2g0311021 55.022 458 160 5 235 652 9 460 6.92e-159 478
Msa0056690 MtrunA17_Chr2g0310951 55.022 458 160 5 235 652 9 460 6.92e-159 478
Msa0056690 MtrunA17_Chr1g0147781 71.698 265 67 3 755 1014 3 264 3.92e-127 387
Msa0056690 MtrunA17_Chr2g0311071 71.642 134 37 1 760 892 14 147 2.34e-62 208
Msa0056690 MtrunA17_Chr2g0311001 71.642 134 37 1 760 892 14 147 2.34e-62 208
Msa0056690 MtrunA17_Chr2g0310941 71.642 134 37 1 760 892 14 147 2.34e-62 208
Msa0056690 MtrunA17_Chr1g0147801 80.597 67 13 0 614 680 16 82 4.16e-30 115
Msa0056690 MtrunA17_Chr1g0147741 94.872 39 1 1 1015 1052 2 40 2.67e-15 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0056690 AT4G31210.3 67.201 811 256 5 237 1042 457 1262 0.0 1164
Msa0056690 AT4G31210.1 67.201 811 256 5 237 1042 461 1266 0.0 1164
Msa0056690 AT4G31210.2 67.816 783 242 5 237 1014 461 1238 0.0 1133
Msa0056690 AT5G63920.1 23.510 604 381 18 321 893 118 671 1.37e-24 111
Msa0056690 AT2G32000.1 22.601 469 296 16 317 768 107 525 9.60e-14 76.3
Msa0056690 AT2G32000.2 22.601 469 296 16 317 768 80 498 1.48e-13 75.9

Find 273 sgRNAs with CRISPR-Local

Find 1336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACTTTATTGTGAATTTA+TGG 0.096332 1_2:-12355777 None:intergenic
CAAACAAATTATCAGCTTTC+AGG 0.125812 1_2:-12355694 None:intergenic
AAATTTGAGGATTATTTATT+TGG 0.131805 1_2:+12349011 Msa0056690:CDS
AATAAATTCTGCAGACTTTC+GGG 0.164617 1_2:+12340130 Msa0056690:CDS
ATTGAAACAAAGAGGGTTTA+AGG 0.184462 1_2:-12337193 None:intergenic
TGAGGTTCTAAATTCATTAA+AGG 0.210162 1_2:+12344723 Msa0056690:CDS
ACGGGAGATTAATGTGAATT+TGG 0.228228 1_2:+12339788 Msa0056690:CDS
TTTGGTTCTGGCTACTTTAT+AGG 0.250431 1_2:+12349556 Msa0056690:CDS
CTATTTAAACCTAGGACTTT+TGG 0.257007 1_2:-12350615 None:intergenic
CATCCTTACAATATAAATTA+AGG 0.268607 1_2:-12355741 None:intergenic
AAGCACATTAAAAGTATTAA+AGG 0.269593 1_2:+12346736 Msa0056690:CDS
GGACACGAACGACTCTTGTT+TGG 0.271516 1_2:-12349041 None:intergenic
AAGGCCTCCTTGGAGATTAT+TGG 0.279369 1_2:+12348717 Msa0056690:CDS
TACATTGCTAAAACATATTA+TGG 0.281207 1_2:+12350540 Msa0056690:CDS
AATTCAAACCCAAGGAATAT+TGG 0.295143 1_2:+12339964 Msa0056690:CDS
AAATAAATTCTGCAGACTTT+CGG 0.296255 1_2:+12340129 Msa0056690:CDS
GTTATTTCAGGTTAAGGATT+TGG 0.299357 1_2:+12351163 Msa0056690:intron
GATGTTAAGAATGTGGATTT+AGG 0.300496 1_2:+12337849 Msa0056690:CDS
CGGTCGGTCTAATGGCTTCA+TGG 0.302889 1_2:-12342394 None:intergenic
AGCTCGAGGGTTGAGTTTCC+TGG 0.309008 1_2:+12343260 Msa0056690:CDS
TATTAACTTAAGTCGACTTT+TGG 0.309857 1_2:-12355661 None:intergenic
GCGTATGTCGGTCGGTCTAA+TGG 0.312067 1_2:-12342402 None:intergenic
ACCATACGACCACGAAATTC+TGG 0.315865 1_2:-12346969 None:intergenic
TATCCTTAATTTATATTGTA+AGG 0.320247 1_2:+12355738 Msa0056690:three_prime_UTR
GAACAAAATTGATGAATTAC+TGG 0.322638 1_2:-12355565 None:intergenic
ATGCGGCATTGATGCTCTTC+AGG 0.323292 1_2:-12339335 None:intergenic
ATGAATTACTGGTATACATT+TGG 0.324640 1_2:-12355554 None:intergenic
GACTTGTCAGCAATGCTGGC+TGG 0.324808 1_2:+12342514 Msa0056690:intron
TATTGAGATGTTACAACAAC+AGG 0.327224 1_2:+12339680 Msa0056690:CDS
GACACGAACGACTCTTGTTT+GGG 0.329100 1_2:-12349040 None:intergenic
AGAATCTTCCCTCACTCATC+TGG 0.332343 1_2:-12355498 None:intergenic
TGGAAAACCTGTCATATTAA+AGG 0.334688 1_2:+12351772 Msa0056690:CDS
ATATTTAAAGTAAGTAGATT+TGG 0.341322 1_2:+12349538 Msa0056690:CDS
TGGATATCGGGCAGTGTTTA+CGG 0.342179 1_2:+12343280 Msa0056690:CDS
AACTGCGGTGGCGAGATTAA+TGG 0.345303 1_2:-12337543 None:intergenic
CTTCCTGCTGATTGGCAACT+TGG 0.346236 1_2:-12339888 None:intergenic
ATGTTAAGAATGTGGATTTA+GGG 0.347366 1_2:+12337850 Msa0056690:CDS
CTCCATAGTCCAATATTCCT+TGG 0.347393 1_2:-12339973 None:intergenic
CACATTACCTTTCAATGATC+AGG 0.351890 1_2:-12340938 None:intergenic
TCAACTTGTTTGAATTGAAA+TGG 0.352592 1_2:-12340058 None:intergenic
TGTTGACTTGTCAGCAATGC+TGG 0.354414 1_2:+12342510 Msa0056690:intron
TCTGCAACTTTAGTCTTGTC+TGG 0.357429 1_2:-12355353 None:intergenic
AATGATCAGGGAGCGAATAT+TGG 0.358648 1_2:-12340925 None:intergenic
GTTAACAGACGTAACGTTAA+CGG 0.361744 1_2:-12337673 None:intergenic
AGGGCCCTTGATTATTTGAT+TGG 0.362453 1_2:+12339831 Msa0056690:CDS
TGCTGAGAAATTCAATTTGT+TGG 0.366733 1_2:-12340231 None:intergenic
AAAGTAAGTAGATTTGGTTC+TGG 0.367955 1_2:+12349544 Msa0056690:CDS
CTTATACGTTGGATTGGATA+AGG 0.368962 1_2:-12337224 None:intergenic
ACTTGTCAGCAATGCTGGCT+GGG 0.374544 1_2:+12342515 Msa0056690:intron
GCCAAATGAAGATTCTTCTA+TGG 0.382866 1_2:+12355529 Msa0056690:three_prime_UTR
TCCATAGTCCAATATTCCTT+GGG 0.384626 1_2:-12339972 None:intergenic
TTGGTGAGAAAGAGGGTTTA+AGG 0.384902 1_2:-12337285 None:intergenic
AGAGACTTGGCTTCAAGGTC+TGG 0.385309 1_2:+12339249 Msa0056690:CDS
TTATACGTTGGATTGGATAA+GGG 0.385587 1_2:-12337223 None:intergenic
TATACTTCTATCAAATAAAT+CGG 0.385665 1_2:-12355621 None:intergenic
TGAAGTGTTGATGTTATATA+AGG 0.386077 1_2:-12340197 None:intergenic
TCCATAGAAGAATCTTCATT+TGG 0.387869 1_2:-12355530 None:intergenic
AAACTCTTGCCAGGTTGATC+TGG 0.388672 1_2:+12339080 Msa0056690:CDS
TGAAGCTATACACACTTATA+TGG 0.391294 1_2:+12342557 Msa0056690:CDS
ATTGAACTCTTCCTGCTGAT+TGG 0.393543 1_2:-12339896 None:intergenic
TCCAAGGAGGCCTTTCCATT+TGG 0.393684 1_2:-12348708 None:intergenic
CTCAAAAGCTAGATCATGAT+TGG 0.395894 1_2:-12344704 None:intergenic
TTAACATTTCGCCATTACTT+TGG 0.396010 1_2:+12339856 Msa0056690:CDS
TTAAGAAACTTGAAGAGCTT+GGG 0.399131 1_2:+12346690 Msa0056690:CDS
GGGTTGAGTTTCCTGGATAT+CGG 0.401164 1_2:+12343267 Msa0056690:CDS
TTTAAATAGTTCAAATGAAA+AGG 0.402303 1_2:+12350629 Msa0056690:CDS
CTGATAATTTGTTTGACCTA+AGG 0.402408 1_2:+12355702 Msa0056690:three_prime_UTR
CAGCTTGATAATGTTTCTGC+TGG 0.405801 1_2:+12348680 Msa0056690:intron
CAACTTGTTTGAATTGAAAT+GGG 0.413609 1_2:-12340057 None:intergenic
AATGTGCTTGCATACGTTGA+AGG 0.415183 1_2:-12346722 None:intergenic
GGCTCTCCGTTTAATGGTGT+TGG 0.415415 1_2:+12337702 Msa0056690:CDS
CTGCAACTTTAGTCTTGTCT+GGG 0.417867 1_2:-12355352 None:intergenic
TCTAATATGTGATAGAGAAC+TGG 0.418028 1_2:+12339932 Msa0056690:CDS
ACCCAAGGAATATTGGACTA+TGG 0.419244 1_2:+12339971 Msa0056690:CDS
GAAGCCGCTAGGGAAATTTA+CGG 0.422062 1_2:+12339104 Msa0056690:CDS
TACAATAGTACCTTAGGAAC+AGG 0.422691 1_2:-12351839 None:intergenic
GTTAAGAAACTTGAAGAGCT+TGG 0.426018 1_2:+12346689 Msa0056690:CDS
AGAGATTAAGAGTGATGAAA+AGG 0.427092 1_2:+12337890 Msa0056690:CDS
TATCACCTAATAAAAGTTCA+AGG 0.427134 1_2:-12355307 None:intergenic
AAACTTGAAGAGCTTGGGAT+TGG 0.430510 1_2:+12346695 Msa0056690:CDS
AAACAAATTATCAGCTTTCA+GGG 0.430516 1_2:-12355693 None:intergenic
AGCAAGAAATGTTAAGTCCT+TGG 0.431815 1_2:-12340027 None:intergenic
GGGAAGTTCCCTCATCTGCC+TGG 0.436762 1_2:+12339307 Msa0056690:CDS
ACCAAATGGAAAGGCCTCCT+TGG 0.442477 1_2:+12348707 Msa0056690:CDS
TATAAGTGTGTATAGCTTCA+AGG 0.443525 1_2:-12342554 None:intergenic
ATGTAAGAGACTTGGCTTCA+AGG 0.449893 1_2:+12339244 Msa0056690:CDS
GTAACGCAAGTGCTTCTTCA+AGG 0.452747 1_2:-12351196 None:intergenic
GCCAAACAAAACTATGATAG+AGG 0.460120 1_2:+12350590 Msa0056690:CDS
CGACGGAGAAGAAGAATAAA+CGG 0.460166 1_2:+12337751 Msa0056690:CDS
ATAGCCTCTCCCTCACGATC+AGG 0.466381 1_2:-12339645 None:intergenic
TTTGCGACCTTTAATATGAC+AGG 0.467674 1_2:-12351779 None:intergenic
AGAAGGAGAAGGAGTTGAGG+TGG 0.470293 1_2:-12337382 None:intergenic
TATAAGCTCTGCTTATACGT+TGG 0.471399 1_2:-12337235 None:intergenic
TAGGACATTGTCACTGAAGC+TGG 0.474217 1_2:+12344658 Msa0056690:intron
ATATTAAAGGTCGCAAAGCT+TGG 0.474359 1_2:+12351785 Msa0056690:CDS
CTCCGTCGCTGTCGACGAGA+AGG 0.475542 1_2:-12337736 None:intergenic
TGGGACTGAGTTGCAACTCC+TGG 0.477017 1_2:-12355478 None:intergenic
TGATAATTTGTTTGACCTAA+GGG 0.478224 1_2:+12355703 Msa0056690:three_prime_UTR
ATAAAAGAATGTCAACCCTT+AGG 0.479212 1_2:-12355718 None:intergenic
GGTTGAGTTTCCTGGATATC+GGG 0.479250 1_2:+12343268 Msa0056690:CDS
TAAATCCAATCAAATAATCA+AGG 0.480541 1_2:-12339836 None:intergenic
TCCTTCTCTTCGCAATCTCA+TGG 0.481324 1_2:+12337398 Msa0056690:CDS
TGTTTGAATTGAAATGGGTT+AGG 0.483236 1_2:-12340052 None:intergenic
CTCCTTCCAACACCATTAAA+CGG 0.487600 1_2:-12337708 None:intergenic
CATTTGAACTATTTAAACCT+AGG 0.488092 1_2:-12350623 None:intergenic
CACACTCATGCTAATTATCC+AGG 0.489571 1_2:-12355400 None:intergenic
AACGTGGTGGTGGTTGTGTA+TGG 0.491520 1_2:-12345569 None:intergenic
GACAATTGCTCCTGTTCCTA+AGG 0.493943 1_2:+12351829 Msa0056690:CDS
TGCAGTTCGTGGTAAGGATA+AGG 0.496630 1_2:+12337794 Msa0056690:CDS
GTAAACACTGCCCGATATCC+AGG 0.497529 1_2:-12343278 None:intergenic
TGGTTCATGCTTACCTTGCA+CGG 0.497862 1_2:+12339808 Msa0056690:CDS
CTGATCAGTCTATTGTGTTA+CGG 0.500748 1_2:+12343231 Msa0056690:CDS
GCTCTGCTTATACGTTGGAT+TGG 0.501107 1_2:-12337230 None:intergenic
GAAGAATAAACGGAAGAAAA+CGG 0.502892 1_2:+12337761 Msa0056690:CDS
TTTGACTTGTTTCAGTTGTA+CGG 0.503033 1_2:+12349504 Msa0056690:intron
TTCTCCGGCTGTAAGCGATT+CGG 0.503537 1_2:+12337989 Msa0056690:CDS
AGCTGTTGCAGTTCGTGGTA+AGG 0.503611 1_2:+12337788 Msa0056690:CDS
GTGAAAGCTGTTGCAGTTCG+TGG 0.504224 1_2:+12337783 Msa0056690:CDS
TTACTTCTGGTGAGGAGGCA+AGG 0.507160 1_2:+12340093 Msa0056690:CDS
GTTATCTCTCCAGAATTTCG+TGG 0.507474 1_2:+12346960 Msa0056690:CDS
GGTTGCATAATCTTCGAACT+TGG 0.508498 1_2:-12355457 None:intergenic
ACAAGAGTCGTTCGTGTCCA+AGG 0.509038 1_2:+12349045 Msa0056690:CDS
TCATGCTTACCTTGCACGGA+GGG 0.510226 1_2:+12339812 Msa0056690:CDS
GGTCGGTCTAATGGCTTCAT+GGG 0.514067 1_2:-12342393 None:intergenic
AAGAGAAGGAGAAGGAGTTG+AGG 0.514204 1_2:-12337385 None:intergenic
TGTAAGCGATTCGGTGGAAG+TGG 0.515576 1_2:+12337998 Msa0056690:CDS
GCATCAATGCCGCATTGAGC+GGG 0.516038 1_2:+12339343 Msa0056690:CDS
AAGAACAGTTTCTTGTCAGA+TGG 0.518261 1_2:+12342582 Msa0056690:CDS
ACATTTCGCCATTACTTTGG+AGG 0.518323 1_2:+12339859 Msa0056690:CDS
TTTCTGCTGGAACAACCAAA+TGG 0.518694 1_2:+12348693 Msa0056690:CDS
CTTGTCAGCAATGCTGGCTG+GGG 0.519883 1_2:+12342516 Msa0056690:intron
CTACAATTTCACTGCTGACA+TGG 0.519964 1_2:+12348057 Msa0056690:CDS
AAGTGAAATCACCTATGAAA+AGG 0.520158 1_2:+12355283 Msa0056690:CDS
CTATGGTCATGTAAGAGACT+TGG 0.521211 1_2:+12339236 Msa0056690:CDS
TCCAGAATTTCGTGGTCGTA+TGG 0.521368 1_2:+12346968 Msa0056690:CDS
ACGTTACTCTGAGGCATCAC+TGG 0.521740 1_2:+12345587 Msa0056690:CDS
TATACGTTGGATTGGATAAG+GGG 0.522774 1_2:-12337222 None:intergenic
AAGCCGCTAGGGAAATTTAC+GGG 0.523429 1_2:+12339105 Msa0056690:CDS
ATAACATACATCAGAACTGA+TGG 0.523438 1_2:+12340481 Msa0056690:CDS
CTTGGCTATTCTATTAGACA+TGG 0.524067 1_2:+12351803 Msa0056690:CDS
GAGGGAGTTGAACTGACTAA+TGG 0.524427 1_2:+12340442 Msa0056690:CDS
TTAACATCATCTTTAACCAC+AGG 0.524985 1_2:-12337834 None:intergenic
ATAGAGGAACCAAAAGTCCT+AGG 0.525619 1_2:+12350606 Msa0056690:CDS
GAATCTTCCCTCACTCATCT+GGG 0.530910 1_2:-12355497 None:intergenic
GATGCTCTTCAGGTGAGTCC+AGG 0.531084 1_2:-12339325 None:intergenic
TATGAAGTCTTGCCAAGCTA+TGG 0.531757 1_2:+12339219 Msa0056690:CDS
TACTTCTGGTGAGGAGGCAA+GGG 0.534533 1_2:+12340094 Msa0056690:CDS
GAAGGAGGTAAACTCTTGCC+AGG 0.535895 1_2:+12339071 Msa0056690:CDS
AGTTGAACATAGATTCCATA+AGG 0.536419 1_2:-12350766 None:intergenic
CGGATAGTTCTGCTTCTACA+AGG 0.536894 1_2:+12339040 Msa0056690:CDS
ATCACCTAATAAAAGTTCAA+GGG 0.537327 1_2:-12355306 None:intergenic
AGATGATGTTAAGATTTCTC+CGG 0.540421 1_2:+12337974 Msa0056690:CDS
TTCTGATGTTCATATTCACC+AGG 0.540572 1_2:+12348769 Msa0056690:CDS
AAGGTTATTCAGAGATACCT+TGG 0.542438 1_2:+12339189 Msa0056690:intron
AGGTGGAGAAGAAGTTGCGT+TGG 0.542763 1_2:-12337365 None:intergenic
GATGTTATATAAGGTGTTGG+AGG 0.543026 1_2:-12340188 None:intergenic
GTTGATGTTATATAAGGTGT+TGG 0.543114 1_2:-12340191 None:intergenic
TCCGTCGCTGTCGACGAGAA+GGG 0.543504 1_2:-12337735 None:intergenic
CTCCGTTTAATGGTGTTGGA+AGG 0.543659 1_2:+12337706 Msa0056690:CDS
AGATCCTGATCGTGAGGGAG+AGG 0.545114 1_2:+12339641 Msa0056690:CDS
TGCAACTTTAGTCTTGTCTG+GGG 0.546445 1_2:-12355351 None:intergenic
CTGACTAATGGTATATCAGC+GGG 0.546556 1_2:+12340454 Msa0056690:CDS
AACTGCTTTGCAAACACCAC+GGG 0.546911 1_2:+12339770 Msa0056690:CDS
GGTGATAAAGTGAGAACTGT+TGG 0.548395 1_2:+12355323 Msa0056690:CDS
GAGAAACGTACCAATGTCAC+TGG 0.550451 1_2:-12351227 None:intergenic
TAAAGATGATGTTAAGAATG+TGG 0.550565 1_2:+12337842 Msa0056690:CDS
TATGTTCAACTCGGAGAAGA+CGG 0.550733 1_2:+12350778 Msa0056690:CDS
TTCCAGATACAACTTGATGT+TGG 0.550837 1_2:+12343203 Msa0056690:intron
TTCGGTTACTTCTGGTGAGG+AGG 0.551156 1_2:+12340088 Msa0056690:CDS
GGTTGTGGAGTCTGTTACAA+AGG 0.551768 1_2:+12339164 Msa0056690:CDS
CTCAGCAAGTCACACAATGA+AGG 0.552323 1_2:+12340247 Msa0056690:CDS
TCTTTCTTCTTACTCCGCAC+CGG 0.553140 1_2:-12337954 None:intergenic
TGTTACGGTCTGCTAGCTCG+AGG 0.553663 1_2:+12343246 Msa0056690:CDS
TCCCTTCTCGTCGACAGCGA+CGG 0.554593 1_2:+12337734 Msa0056690:CDS
TTACCAAGTTGCCAATCAGC+AGG 0.554681 1_2:+12339885 Msa0056690:CDS
GCCTCAGAGTAACGTGGTGG+TGG 0.555980 1_2:-12345579 None:intergenic
GGGAAAGTCTGTGATGGTTG+TGG 0.557578 1_2:+12339149 Msa0056690:CDS
GGAACAAGCTGTTCTTGAGA+AGG 0.557784 1_2:+12342603 Msa0056690:CDS
TATTGTGAATTTATGGTGAG+TGG 0.558041 1_2:-12355770 None:intergenic
TGAATGAACGGATAGGAAAA+CGG 0.558099 1_2:-12337611 None:intergenic
CACCATACTAAAATCATCGT+CGG 0.558958 1_2:-12339283 None:intergenic
AGCATCAATGCCGCATTGAG+CGG 0.560169 1_2:+12339342 Msa0056690:CDS
ATATTATGGTGACGAGGAGG+AGG 0.562737 1_2:+12350554 Msa0056690:CDS
ATGTTCAACTCGGAGAAGAC+GGG 0.562952 1_2:+12350779 Msa0056690:CDS
ACCATACTAAAATCATCGTC+GGG 0.564514 1_2:-12339282 None:intergenic
TACCACTTCAAAAGAAACTA+CGG 0.565894 1_2:+12339020 Msa0056690:CDS
TTTCCCATGGGTGGATACAA+TGG 0.565995 1_2:-12339132 None:intergenic
AATCAAGGGCCCTCCGTGCA+AGG 0.566678 1_2:-12339821 None:intergenic
TCCGGCTGTAAGCGATTCGG+TGG 0.566721 1_2:+12337992 Msa0056690:CDS
GTTACGGTCTGCTAGCTCGA+GGG 0.566817 1_2:+12343247 Msa0056690:CDS
ACCATGAGATTGCGAAGAGA+AGG 0.567030 1_2:-12337399 None:intergenic
GTTGATCTGGAGAAGCCGCT+AGG 0.568046 1_2:+12339093 Msa0056690:CDS
AAAACCATTGTATCCACCCA+TGG 0.570983 1_2:+12339128 Msa0056690:CDS
TGTTGATAACGCTGAATGAA+CGG 0.571063 1_2:-12337623 None:intergenic
AGGTGAGTCCAGGCAGATGA+GGG 0.574847 1_2:-12339315 None:intergenic
GTTTCTTATTGAAACAAAGA+GGG 0.576242 1_2:-12337200 None:intergenic
TCTCTTACATGACCATAGCT+TGG 0.576525 1_2:-12339231 None:intergenic
CAGGTGAGTCCAGGCAGATG+AGG 0.577157 1_2:-12339316 None:intergenic
TGCATCAGATCCTGATCGTG+AGG 0.579247 1_2:+12339635 Msa0056690:CDS
AATTGATCAATTCAAACCCA+AGG 0.581974 1_2:+12339956 Msa0056690:CDS
ATCACAGACTTTCCCATGGG+TGG 0.582611 1_2:-12339141 None:intergenic
GGTAACTTGCGTATGTCGGT+CGG 0.582917 1_2:-12342410 None:intergenic
GGTTTCTTATTGAAACAAAG+AGG 0.583819 1_2:-12337201 None:intergenic
ACATTACCTTTCAATGATCA+GGG 0.585296 1_2:-12340937 None:intergenic
TTCGCTCCCTGATCATTGAA+AGG 0.587418 1_2:+12340931 Msa0056690:CDS
GGTAACTTCCTCCAAAGTAA+TGG 0.587971 1_2:-12339867 None:intergenic
TTGATCTGGAGAAGCCGCTA+GGG 0.590160 1_2:+12339094 Msa0056690:CDS
GAATATGAACATCAGAAGTA+CGG 0.591032 1_2:-12348763 None:intergenic
ACTTGTTTCAGTTGTACGGA+AGG 0.591859 1_2:+12349508 Msa0056690:intron
AAATCCAATCAAATAATCAA+GGG 0.593996 1_2:-12339835 None:intergenic
CGCAAGTGCTTCTTCAAGGG+TGG 0.594856 1_2:-12351192 None:intergenic
GGAGTCTGTTACAAAGGCAA+AGG 0.595186 1_2:+12339170 Msa0056690:CDS
CACGATCAGGATCTGATGCA+AGG 0.596493 1_2:-12339632 None:intergenic
ACATGGTAACTTGCGTATGT+CGG 0.597742 1_2:-12342414 None:intergenic
AGCGATTCGGTGGAAGTGGT+TGG 0.599092 1_2:+12338002 Msa0056690:CDS
AGGGAAGAAGACTAATTCAA+AGG 0.599794 1_2:+12338058 Msa0056690:CDS
GTTACATCTTGTTCAAACTG+AGG 0.600568 1_2:+12345536 Msa0056690:CDS
GCTGGAACAACCAAATGGAA+AGG 0.600569 1_2:+12348698 Msa0056690:CDS
TAACGCAAGTGCTTCTTCAA+GGG 0.605084 1_2:-12351195 None:intergenic
CTGCTCTTTGATACTAAACA+TGG 0.605743 1_2:-12339997 None:intergenic
ACCGCGTCCAATAATCTCCA+AGG 0.610349 1_2:-12348724 None:intergenic
AACCATCACAGACTTTCCCA+TGG 0.612385 1_2:-12339145 None:intergenic
GTGAGGGAGAGGCTATCGCT+TGG 0.621022 1_2:+12339652 Msa0056690:CDS
TCCACCGAATCGCTTACAGC+CGG 0.623004 1_2:-12337993 None:intergenic
TCCTTGGAGATTATTGGACG+CGG 0.624643 1_2:+12348723 Msa0056690:CDS
ATAACGCTGAATGAACGGAT+AGG 0.625026 1_2:-12337618 None:intergenic
ACTACAATATCCAGTGACAT+TGG 0.626234 1_2:+12351217 Msa0056690:CDS
CACTGCTGACATGGAAACTG+AGG 0.627068 1_2:+12348066 Msa0056690:CDS
ACGTGCGGAGGTAACTGCGG+TGG 0.628679 1_2:-12337555 None:intergenic
AAAACGGTTACAGCGGTGAA+CGG 0.630539 1_2:-12337595 None:intergenic
ACCATCACAGACTTTCCCAT+GGG 0.631567 1_2:-12339144 None:intergenic
ACTCAGTCCCAGATGAGTGA+GGG 0.633571 1_2:+12355490 Msa0056690:three_prime_UTR
AAACCATTGTATCCACCCAT+GGG 0.635514 1_2:+12339129 Msa0056690:CDS
AGAAGAAGAAGAAGCCGGTG+CGG 0.635585 1_2:+12337940 Msa0056690:CDS
GCAACTTTAGTCTTGTCTGG+GGG 0.641379 1_2:-12355350 None:intergenic
AACTCAGTCCCAGATGAGTG+AGG 0.641627 1_2:+12355489 Msa0056690:three_prime_UTR
TAGGGTAAGCATCCTGACGA+TGG 0.648694 1_2:+12351752 Msa0056690:intron
TATGGAATCTATGTTCAACT+CGG 0.651482 1_2:+12350769 Msa0056690:CDS
GCGGCTTCTCCAGATCAACC+TGG 0.653095 1_2:-12339089 None:intergenic
GCATCAGATCCTGATCGTGA+GGG 0.655516 1_2:+12339636 Msa0056690:CDS
AGATTGCGAAGAGAAGGAGA+AGG 0.657827 1_2:-12337393 None:intergenic
AAACTGCTTTGCAAACACCA+CGG 0.658793 1_2:+12339769 Msa0056690:CDS
AACATATTATGGTGACGAGG+AGG 0.659545 1_2:+12350551 Msa0056690:CDS
CAAGGAATATTGGACTATGG+AGG 0.662106 1_2:+12339974 Msa0056690:CDS
TATAATACTCACTTGCACCT+CGG 0.663273 1_2:-12349592 None:intergenic
TTAGTTACATTCACGTGCGG+AGG 0.663278 1_2:-12337567 None:intergenic
TTTCCCGTAAATTTCCCTAG+CGG 0.665996 1_2:-12339108 None:intergenic
GAAATTCTGGAGAGATAACA+CGG 0.666318 1_2:-12346956 None:intergenic
ATAAAGTGAGAACTGTTGGT+CGG 0.668182 1_2:+12355327 Msa0056690:CDS
TTTAAGGCGATAATTGCAAG+TGG 0.668549 1_2:-12337269 None:intergenic
ACCCATGGGAAAGTCTGTGA+TGG 0.670381 1_2:+12339143 Msa0056690:CDS
GGACGAGACAGAGACAGTGA+CGG 0.671568 1_2:+12344679 Msa0056690:CDS
AAATTCACATTAATCTCCCG+TGG 0.671874 1_2:-12339786 None:intergenic
AGTTCGAAGATTATGCAACC+AGG 0.672579 1_2:+12355460 Msa0056690:three_prime_UTR
TTCATGCTTACCTTGCACGG+AGG 0.673339 1_2:+12339811 Msa0056690:CDS
ACTGACTAATGGTATATCAG+CGG 0.682118 1_2:+12340453 Msa0056690:CDS
CAAAGAGCAGAGATTAACCA+AGG 0.685631 1_2:+12340010 Msa0056690:CDS
TTCACGTGCGGAGGTAACTG+CGG 0.687135 1_2:-12337558 None:intergenic
ACCACCACCACGTTACTCTG+AGG 0.689454 1_2:+12345578 Msa0056690:CDS
TCAACTCGGAGAAGACGGGA+AGG 0.691500 1_2:+12350783 Msa0056690:CDS
ATGTTAGTTACATTCACGTG+CGG 0.693215 1_2:-12337570 None:intergenic
ATTGAGATGTTACAACAACA+GGG 0.697062 1_2:+12339681 Msa0056690:CDS
TGTGAAATCTAGTGAACCTG+TGG 0.705640 1_2:+12337818 Msa0056690:CDS
GGATAGGAAAACGGTTACAG+CGG 0.707796 1_2:-12337602 None:intergenic
TAGGCTGTGATCAACATCCG+AGG 0.711823 1_2:+12349575 Msa0056690:CDS
CTTGCTCAGAAACTCTACGA+GGG 0.714343 1_2:+12340424 Msa0056690:CDS
GCGTCCAATAATCTCCAAGG+AGG 0.736331 1_2:-12348721 None:intergenic
AGACTTCATACATATCACCA+AGG 0.741726 1_2:-12339206 None:intergenic
TAAAACATATTATGGTGACG+AGG 0.743355 1_2:+12350548 Msa0056690:CDS
AGTGATGCCTCAGAGTAACG+TGG 0.746122 1_2:-12345585 None:intergenic
GCTTGCTCAGAAACTCTACG+AGG 0.764842 1_2:+12340423 Msa0056690:intron
GAGAATGTACCCGCTCAATG+CGG 0.768402 1_2:-12339352 None:intergenic
GATGCCTCAGAGTAACGTGG+TGG 0.781483 1_2:-12345582 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTATTTATTTTAAA+AGG + chr1_2:12341514-12341533 Msa0056690:intron 0.0%
!! TTTATATTATAAATTAAATA+TGG + chr1_2:12347870-12347889 Msa0056690:intron 0.0%
!! TTATATTATAAATTAAATAT+GGG + chr1_2:12347871-12347890 Msa0056690:intron 0.0%
!!! TAAATTTTAAAAATATTTAT+AGG + chr1_2:12348342-12348361 Msa0056690:intron 0.0%
!! AATCATAAAAAGAATAATAA+TGG - chr1_2:12338797-12338816 None:intergenic 10.0%
!! AAATAAATAAAAATTACACA+AGG - chr1_2:12341510-12341529 None:intergenic 10.0%
!! AAATTATTTATATGTATAGT+TGG + chr1_2:12342135-12342154 Msa0056690:intron 10.0%
!! AATTATTTATATGTATAGTT+GGG + chr1_2:12342136-12342155 Msa0056690:intron 10.0%
!!! TATTATTTTATTGTTATTGA+TGG + chr1_2:12343782-12343801 Msa0056690:intron 10.0%
!!! TATTTTATTATTTTTCTAGT+GGG + chr1_2:12344966-12344985 Msa0056690:intron 10.0%
!!! TATTTTTAGTAATTTGTAAT+TGG + chr1_2:12347203-12347222 Msa0056690:intron 10.0%
!! TTAAGAATTTATATACTTAT+TGG + chr1_2:12349223-12349242 Msa0056690:intron 10.0%
!! TAAAATAATATATTATCAGA+TGG - chr1_2:12352153-12352172 None:intergenic 10.0%
!!! GATTTTCAAATTTTTAATTT+GGG - chr1_2:12352703-12352722 None:intergenic 10.0%
!!! TGATTTTCAAATTTTTAATT+TGG - chr1_2:12352704-12352723 None:intergenic 10.0%
!! TAAAATAATATATTATCAGA+TGG - chr1_2:12352153-12352172 None:intergenic 10.0%
!! TAAAATAATATATTATCAGA+TGG - chr1_2:12352153-12352172 None:intergenic 10.0%
!! TATATTAATATAATTCTCTG+TGG + chr1_2:12339414-12339433 Msa0056690:intron 15.0%
!! ATATTAATATAATTCTCTGT+GGG + chr1_2:12339415-12339434 Msa0056690:intron 15.0%
!! AATAACATTAATAATTGGAA+TGG + chr1_2:12339514-12339533 Msa0056690:intron 15.0%
!! TAATTCAATAGAGATTAATT+AGG - chr1_2:12340395-12340414 None:intergenic 15.0%
!! ATTTATATACAAAACACAAA+GGG - chr1_2:12340561-12340580 None:intergenic 15.0%
!! TATTTATATACAAAACACAA+AGG - chr1_2:12340562-12340581 None:intergenic 15.0%
!!! AACCAAATTAAACTTTTTTT+AGG - chr1_2:12341378-12341397 None:intergenic 15.0%
!!! TTTACCTTTTTAAAATACTT+TGG - chr1_2:12342359-12342378 None:intergenic 15.0%
!!! GAGTATTAGATTTTTATATT+GGG - chr1_2:12344072-12344091 None:intergenic 15.0%
!!! AGAGTATTAGATTTTTATAT+TGG - chr1_2:12344073-12344092 None:intergenic 15.0%
!!! TCAATATACTTTTTTTTATG+TGG - chr1_2:12344096-12344115 None:intergenic 15.0%
!!! GAGTATTAGATTTTTATTTT+GGG - chr1_2:12344280-12344299 None:intergenic 15.0%
!!! AGAGTATTAGATTTTTATTT+TGG - chr1_2:12344281-12344300 None:intergenic 15.0%
!!! TCAATATACATTTTTTTATG+TGG - chr1_2:12344304-12344323 None:intergenic 15.0%
!!! CTATTTTATTATTTTTCTAG+TGG + chr1_2:12344965-12344984 Msa0056690:intron 15.0%
!!! ATTTTATTATTTTTCTAGTG+GGG + chr1_2:12344967-12344986 Msa0056690:intron 15.0%
!! TATATAATAAAAGTCAATGA+GGG - chr1_2:12345504-12345523 None:intergenic 15.0%
!!! TATTGATTTATATCTTTTCT+CGG + chr1_2:12347135-12347154 Msa0056690:intron 15.0%
!!! TATTGATTCTCATAATTAAA+AGG - chr1_2:12347393-12347412 None:intergenic 15.0%
!!! ATAAATATGTTGTCTTTTAT+TGG + chr1_2:12347588-12347607 Msa0056690:intron 15.0%
!!! TAAATATGTTGTCTTTTATT+GGG + chr1_2:12347589-12347608 Msa0056690:intron 15.0%
!!! ATTTATATTCTTACATGTTT+TGG + chr1_2:12348193-12348212 Msa0056690:intron 15.0%
!!! TTTAACTTAGTGAAAAAAAT+TGG - chr1_2:12348326-12348345 None:intergenic 15.0%
!! AAAATCAAATAAAAACGTTA+CGG - chr1_2:12348580-12348599 None:intergenic 15.0%
!! AAATTTGAGGATTATTTATT+TGG + chr1_2:12349011-12349030 Msa0056690:CDS 15.0%
!!! ATATTTAAAGTAAGTAGATT+TGG + chr1_2:12349538-12349557 Msa0056690:CDS 15.0%
!!! TTTTAAAAATTTACTTCTGT+TGG - chr1_2:12350258-12350277 None:intergenic 15.0%
!!! AACAGAAGTAAATTTTTAAA+AGG + chr1_2:12350257-12350276 Msa0056690:intron 15.0%
!!! ACAGAAGTAAATTTTTAAAA+GGG + chr1_2:12350258-12350277 Msa0056690:intron 15.0%
!!! ACAAATTAATGTGTTTTTTT+AGG - chr1_2:12350418-12350437 None:intergenic 15.0%
!! TTTAAATAGTTCAAATGAAA+AGG + chr1_2:12350629-12350648 Msa0056690:CDS 15.0%
!! TATTGTGTATAAATAGAATA+AGG - chr1_2:12351022-12351041 None:intergenic 15.0%
!! TACATACTAATAATTACAAT+TGG + chr1_2:12351040-12351059 Msa0056690:intron 15.0%
!!! ATAATTGAGTTTTATACATA+TGG + chr1_2:12351317-12351336 Msa0056690:intron 15.0%
!!! TTCAGTTTAATTTACATATA+CGG - chr1_2:12351560-12351579 None:intergenic 15.0%
!! TATGTTTATTCAAATTGATA+TGG - chr1_2:12354233-12354252 None:intergenic 15.0%
!!! GATTTTCAAATTTTTAATCT+GGG - chr1_2:12354398-12354417 None:intergenic 15.0%
!!! TGATTTTCAAATTTTTAATC+TGG - chr1_2:12354399-12354418 None:intergenic 15.0%
!! TATATATACAAAAAAGAACA+TGG - chr1_2:12355590-12355609 None:intergenic 15.0%
!!! ATGTTCTTTTTTGTATATAT+AGG + chr1_2:12355589-12355608 Msa0056690:three_prime_UTR 15.0%
!! TATACTTCTATCAAATAAAT+CGG - chr1_2:12355624-12355643 None:intergenic 15.0%
!! TATCCTTAATTTATATTGTA+AGG + chr1_2:12355738-12355757 Msa0056690:three_prime_UTR 15.0%
!! TACAAAATGTTGTCAAATAA+CGG - chr1_2:12338476-12338495 None:intergenic 20.0%
!! TTTATTATTCGCCTAATTAA+AGG + chr1_2:12338728-12338747 Msa0056690:intron 20.0%
!! TTATTATTCGCCTAATTAAA+GGG + chr1_2:12338729-12338748 Msa0056690:intron 20.0%
!!! AGAATAATAATGGAATATGA+TGG - chr1_2:12338787-12338806 None:intergenic 20.0%
!!! TCTGCATAATAATATTTTTC+TGG + chr1_2:12339707-12339726 Msa0056690:CDS 20.0%
!! AAATCCAATCAAATAATCAA+GGG - chr1_2:12339838-12339857 None:intergenic 20.0%
!! TAAATCCAATCAAATAATCA+AGG - chr1_2:12339839-12339858 None:intergenic 20.0%
!!! AAACAAGTTGAATCAATTTT+CGG + chr1_2:12340070-12340089 Msa0056690:CDS 20.0%
!! TAATTAAATCATAATTCCAC+AGG - chr1_2:12340348-12340367 None:intergenic 20.0%
!! AATAGTAATACAATACAAAG+AGG - chr1_2:12340653-12340672 None:intergenic 20.0%
!! ATGAAAAGCAATGTTAAATA+CGG - chr1_2:12340678-12340697 None:intergenic 20.0%
!!! CAATTTTGATTTTTACTAGT+CGG + chr1_2:12340772-12340791 Msa0056690:intron 20.0%
!!! TAGGCAAAATGTAATTTTTA+CGG - chr1_2:12341050-12341069 None:intergenic 20.0%
!! TTGAAAAAATAAAAGAGAAG+AGG + chr1_2:12341928-12341947 Msa0056690:intron 20.0%
!!! TAATATATTTTCACAGTTGT+TGG - chr1_2:12342038-12342057 None:intergenic 20.0%
!!! AAATTTGAATGCTTATTTTC+TGG + chr1_2:12342251-12342270 Msa0056690:intron 20.0%
!!! AAGTTTTGATTTATCTAATG+TGG + chr1_2:12342281-12342300 Msa0056690:intron 20.0%
!!! AGTTTTGATTTATCTAATGT+GGG + chr1_2:12342282-12342301 Msa0056690:intron 20.0%
!! TTTACTTCAATAATGAACAA+AGG + chr1_2:12342463-12342482 Msa0056690:intron 20.0%
!! TTACTTCAATAATGAACAAA+GGG + chr1_2:12342464-12342483 Msa0056690:intron 20.0%
!!! ACATTTTTCTACTTTTTAGA+TGG + chr1_2:12342767-12342786 Msa0056690:intron 20.0%
!! GATGGTAAAAAAATTTCTTA+AGG + chr1_2:12342785-12342804 Msa0056690:intron 20.0%
!!! ATAACTAATTTAAGAGGTTT+TGG - chr1_2:12343079-12343098 None:intergenic 20.0%
!! AAACCTCTTAAATTAGTTAT+AGG + chr1_2:12343079-12343098 Msa0056690:intron 20.0%
!! AATAACAACAATTACTTAGA+TGG - chr1_2:12343760-12343779 None:intergenic 20.0%
!! TAAACGAACTGAAAATAATA+CGG - chr1_2:12343809-12343828 None:intergenic 20.0%
!!! TCTCAAGAATATTATTTTAC+TGG - chr1_2:12344613-12344632 None:intergenic 20.0%
!! CATTAAAGGTAATATATTTC+TGG + chr1_2:12344737-12344756 Msa0056690:intron 20.0%
!! AAAAATAATAAAATAGACCG+TGG - chr1_2:12344961-12344980 None:intergenic 20.0%
!!! TTTTATTATTTTTCTAGTGG+GGG + chr1_2:12344968-12344987 Msa0056690:intron 20.0%
!!! TTAAGCTTTATTTGAAAGAA+TGG + chr1_2:12345126-12345145 Msa0056690:intron 20.0%
!!! TAAGCTTTATTTGAAAGAAT+GGG + chr1_2:12345127-12345146 Msa0056690:intron 20.0%
!! ACTTAGTAAATAGGTTTATA+GGG + chr1_2:12345173-12345192 Msa0056690:intron 20.0%
!!! AATTAGTTTTGATCTACTAA+TGG - chr1_2:12345399-12345418 None:intergenic 20.0%
!!! GAAAGGTGTTAAATAATTTA+CGG - chr1_2:12345482-12345501 None:intergenic 20.0%
!! CTATATAATAAAAGTCAATG+AGG - chr1_2:12345505-12345524 None:intergenic 20.0%
!!! CATTCTGTGTTTTTTTTTTT+TGG + chr1_2:12345615-12345634 Msa0056690:intron 20.0%
!! AAGAAAATCCAATAAACAAA+AGG - chr1_2:12346025-12346044 None:intergenic 20.0%
!!! AAGCACATTAAAAGTATTAA+AGG + chr1_2:12346736-12346755 Msa0056690:CDS 20.0%
!! TTTCTAAATTTATTGTTTGC+TGG + chr1_2:12347008-12347027 Msa0056690:intron 20.0%
!! TTCTAAATTTATTGTTTGCT+GGG + chr1_2:12347009-12347028 Msa0056690:intron 20.0%
!! CAATTTATCTGATATATGAT+TGG + chr1_2:12347420-12347439 Msa0056690:intron 20.0%
!!! TTTAAAACTGTATAGACAAT+AGG - chr1_2:12347482-12347501 None:intergenic 20.0%
!! GAAATGACATTTGAAAATAT+GGG + chr1_2:12347684-12347703 Msa0056690:intron 20.0%
!! GAAAAATGATTGAAAATACA+TGG - chr1_2:12348131-12348150 None:intergenic 20.0%
!! AAATCAAATAAAAACGTTAC+GGG - chr1_2:12348579-12348598 None:intergenic 20.0%
!!! TTAATTATTTTTATGCTTGC+AGG + chr1_2:12348968-12348987 Msa0056690:intron 20.0%
!! GATGTTAGAAAAAAAATTTG+AGG + chr1_2:12348998-12349017 Msa0056690:CDS 20.0%
!! CTATGATACAAAAAATAATG+AGG + chr1_2:12349780-12349799 Msa0056690:intron 20.0%
!! TAGTTTAATCGTATTACTTA+TGG - chr1_2:12349962-12349981 None:intergenic 20.0%
!! TAATACGATTAAACTATCTT+GGG + chr1_2:12349966-12349985 Msa0056690:intron 20.0%
!!! TAAAAGGGTTTAGTTTTAAA+TGG + chr1_2:12350273-12350292 Msa0056690:intron 20.0%
!! TAAAAAGTTTACAAATTAGC+AGG - chr1_2:12350444-12350463 None:intergenic 20.0%
!!! TGCTAATTTGTAAACTTTTT+AGG + chr1_2:12350443-12350462 Msa0056690:intron 20.0%
!! GGAAATTATAAATTTATGAG+TGG + chr1_2:12350494-12350513 Msa0056690:intron 20.0%
!! TACATTGCTAAAACATATTA+TGG + chr1_2:12350540-12350559 Msa0056690:CDS 20.0%
!! TGCTAAATATTGTGTATAAT+TGG + chr1_2:12350708-12350727 Msa0056690:intron 20.0%
!! ATATTGTAACTCATAAAATG+TGG + chr1_2:12351140-12351159 Msa0056690:intron 20.0%
!! TATTGTAACTCATAAAATGT+GGG + chr1_2:12351141-12351160 Msa0056690:intron 20.0%
!! TCAATTATTTCATCATAAAC+CGG - chr1_2:12351305-12351324 None:intergenic 20.0%
!! GTTTAATTGATATAAACCAT+CGG + chr1_2:12351393-12351412 Msa0056690:intron 20.0%
!!! ACTTATTAAATGTTTTCTTC+TGG + chr1_2:12351726-12351745 Msa0056690:intron 20.0%
!!! AAGAGTAATTTTTTAGAGAA+TGG + chr1_2:12353003-12353022 Msa0056690:intron 20.0%
!!! GAATGTTGTTTTAAATGAAA+TGG + chr1_2:12353651-12353670 Msa0056690:intron 20.0%
!! CAAATTTACAAAACAAACAA+GGG - chr1_2:12353910-12353929 None:intergenic 20.0%
!! ACAAATTTACAAAACAAACA+AGG - chr1_2:12353911-12353930 None:intergenic 20.0%
!!! TTTAATTACACCAGTTTTAA+CGG + chr1_2:12352261-12352280 Msa0056690:intron 20.0%
!! CAATATTACAAAACAAACAT+TGG - chr1_2:12355176-12355195 None:intergenic 20.0%
!! CATCCTTACAATATAAATTA+AGG - chr1_2:12355744-12355763 None:intergenic 20.0%
!! TCTACTTTATTGTGAATTTA+TGG - chr1_2:12355780-12355799 None:intergenic 20.0%
! GTTTCTTATTGAAACAAAGA+GGG - chr1_2:12337203-12337222 None:intergenic 25.0%
!!! AGTTTTTCATTGTGTTTTGA+GGG - chr1_2:12337314-12337333 None:intergenic 25.0%
! TAAAGATGATGTTAAGAATG+TGG + chr1_2:12337842-12337861 Msa0056690:CDS 25.0%
! ATGTTAAGAATGTGGATTTA+GGG + chr1_2:12337850-12337869 Msa0056690:CDS 25.0%
!! TTGATAATAACACATTACAC+AGG + chr1_2:12338102-12338121 Msa0056690:intron 25.0%
! TGATAATAACACATTACACA+GGG + chr1_2:12338103-12338122 Msa0056690:intron 25.0%
!!! TACAAAGTGTTGTCAAATAT+CGG - chr1_2:12338357-12338376 None:intergenic 25.0%
! ACTATAGCATAGAGAAATTT+AGG - chr1_2:12338413-12338432 None:intergenic 25.0%
! TATTATTCGCCTAATTAAAG+GGG + chr1_2:12338730-12338749 Msa0056690:intron 25.0%
!! CAACTTGTTTGAATTGAAAT+GGG - chr1_2:12340060-12340079 None:intergenic 25.0%
!! TCAACTTGTTTGAATTGAAA+TGG - chr1_2:12340061-12340080 None:intergenic 25.0%
! AAATAAATTCTGCAGACTTT+CGG + chr1_2:12340129-12340148 Msa0056690:CDS 25.0%
!!! TGAAGTGTTGATGTTATATA+AGG - chr1_2:12340200-12340219 None:intergenic 25.0%
! TGAAAAGCAATGTTAAATAC+GGG - chr1_2:12340677-12340696 None:intergenic 25.0%
!!! TCGTTTCTATTTTTAACACT+TGG + chr1_2:12340868-12340887 Msa0056690:intron 25.0%
!! ATTTTTGACCCAAAATTTTG+AGG - chr1_2:12341353-12341372 None:intergenic 25.0%
!!! TCAAAATTTTGGGTCAAAAA+TGG + chr1_2:12341352-12341371 Msa0056690:intron 25.0%
! GGCCTAAAAAAAGTTTAATT+TGG + chr1_2:12341373-12341392 Msa0056690:intron 25.0%
! ACAGGAATGAAAAAAAAAGT+TGG + chr1_2:12341870-12341889 Msa0056690:intron 25.0%
! AAAAAGTTGGAGAAAGATAA+AGG + chr1_2:12341883-12341902 Msa0056690:intron 25.0%
!! GACATGTTAGAGTAATTTTT+AGG - chr1_2:12342083-12342102 None:intergenic 25.0%
! TAATGTGGGTTTAAATTTAC+TGG + chr1_2:12342296-12342315 Msa0056690:intron 25.0%
! AATGTGGGTTTAAATTTACT+GGG + chr1_2:12342297-12342316 Msa0056690:intron 25.0%
!!! ACCTTTTTAAAATACTTTGG+CGG - chr1_2:12342356-12342375 None:intergenic 25.0%
! AAAGCATATCACATATTACA+TGG - chr1_2:12342434-12342453 None:intergenic 25.0%
!! AAAAATTTTGTTCGGATGAT+TGG + chr1_2:12342704-12342723 Msa0056690:intron 25.0%
!! AAAGAGCATATCTCAAAATT+TGG + chr1_2:12343039-12343058 Msa0056690:intron 25.0%
! TCTCCTATAACTAATTTAAG+AGG - chr1_2:12343085-12343104 None:intergenic 25.0%
!! ATTTTAGATCTACTTCCTTT+TGG - chr1_2:12343137-12343156 None:intergenic 25.0%
!!! GATTCTAAAAAGTTTTACGT+TGG - chr1_2:12343496-12343515 None:intergenic 25.0%
!!! TTTTTAGAATCTCTATGACA+TGG + chr1_2:12343505-12343524 Msa0056690:intron 25.0%
! GTTCTATCATAAACCATATT+TGG - chr1_2:12343602-12343621 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG + chr1_2:12343606-12343625 Msa0056690:intron 25.0%
! TCCAATGTGAAAATCTAAAA+TGG + chr1_2:12343879-12343898 Msa0056690:intron 25.0%
!! ACCATTTTAGATTTTCACAT+TGG - chr1_2:12343883-12343902 None:intergenic 25.0%
!! TCCCACATTGATTAAATATA+AGG + chr1_2:12343979-12343998 Msa0056690:intron 25.0%
! GCCTTATATTTAATCAATGT+GGG - chr1_2:12343983-12344002 None:intergenic 25.0%
! ACTTGATAAAAAGAGACTTA+CGG + chr1_2:12344163-12344182 Msa0056690:intron 25.0%
! ACTTGATAAAAAGAGACTTA+CGG + chr1_2:12344163-12344182 Msa0056690:intron 25.0%
!! TCTACTTTAGCTTAAATTGA+TGG - chr1_2:12344554-12344573 None:intergenic 25.0%
!!! TTTTAAAGGTACAGTATATG+TGG - chr1_2:12344583-12344602 None:intergenic 25.0%
! ATATTCTTGAGACTTATGTA+TGG + chr1_2:12344621-12344640 Msa0056690:intron 25.0%
!!! TGAGGTTCTAAATTCATTAA+AGG + chr1_2:12344723-12344742 Msa0056690:CDS 25.0%
!!! TTCCTTATGTTGCTTTTAAA+AGG + chr1_2:12344862-12344881 Msa0056690:intron 25.0%
! TATATACAGATAAAACAGCA+AGG + chr1_2:12344897-12344916 Msa0056690:intron 25.0%
! ATATACAGATAAAACAGCAA+GGG + chr1_2:12344898-12344917 Msa0056690:intron 25.0%
! ACAAAATCATTTAGAAGAGT+TGG - chr1_2:12344998-12345017 None:intergenic 25.0%
!! AACTCTTCTAAATGATTTTG+TGG + chr1_2:12344997-12345016 Msa0056690:intron 25.0%
!! TTCTAAATGATTTTGTGGTT+AGG + chr1_2:12345002-12345021 Msa0056690:intron 25.0%
!!! AAGCTTTATTTGAAAGAATG+GGG + chr1_2:12345128-12345147 Msa0056690:intron 25.0%
! CACTTAGTAAATAGGTTTAT+AGG + chr1_2:12345172-12345191 Msa0056690:intron 25.0%
! CTTAGTAAATAGGTTTATAG+GGG + chr1_2:12345174-12345193 Msa0056690:intron 25.0%
! TTAGTAAATAGGTTTATAGG+GGG + chr1_2:12345175-12345194 Msa0056690:intron 25.0%
! GAACAATTAGCAAAATGAAT+AGG - chr1_2:12345267-12345286 None:intergenic 25.0%
! TTGTACATATCAATCAGAAA+CGG + chr1_2:12345366-12345385 Msa0056690:intron 25.0%
! ATGTCAAAAAATAACGCAAT+CGG - chr1_2:12345423-12345442 None:intergenic 25.0%
! GTAGAACTTATTCTTGATAT+TGG + chr1_2:12345725-12345744 Msa0056690:intron 25.0%
! ATAATATATAACCCGTTGTT+AGG - chr1_2:12345754-12345773 None:intergenic 25.0%
! TAATACCTGATTCAATTCAA+TGG + chr1_2:12345973-12345992 Msa0056690:intron 25.0%
!!! AAAGCTTTCCTTTTGTTTAT+TGG + chr1_2:12346014-12346033 Msa0056690:intron 25.0%
!! AAATAATAGAAGTACACTGT+TGG - chr1_2:12346054-12346073 None:intergenic 25.0%
! TTTAAATATATGCTTTGTGC+TGG + chr1_2:12346422-12346441 Msa0056690:intron 25.0%
! TTTAAATATATGCTTTGTGC+TGG + chr1_2:12346422-12346441 Msa0056690:intron 25.0%
!!! CTGTTTTGTTTTCTCTTTTT+AGG + chr1_2:12346637-12346656 Msa0056690:intron 25.0%
!!! AGTATTAAAGGTATTTGACT+TGG + chr1_2:12346748-12346767 Msa0056690:intron 25.0%
! GAAATAAGATAGAAAAGACA+TGG - chr1_2:12346798-12346817 None:intergenic 25.0%
!! TTCTATCTTATTTCATGTCA+AGG + chr1_2:12346804-12346823 Msa0056690:intron 25.0%
! ATATAGTACAACAATAGAAC+TGG - chr1_2:12347044-12347063 None:intergenic 25.0%
! TATTGTAGCTTGAAATTAGA+GGG - chr1_2:12347346-12347365 None:intergenic 25.0%
! GGAAATGACATTTGAAAATA+TGG + chr1_2:12347683-12347702 Msa0056690:intron 25.0%
! TATTGCTCTATAAAATACTG+AGG - chr1_2:12347760-12347779 None:intergenic 25.0%
! TGTGGGGAATTAAATATAAA+AGG - chr1_2:12347805-12347824 None:intergenic 25.0%
!! AAATTAAATATGGGTCCTTT+TGG + chr1_2:12347880-12347899 Msa0056690:intron 25.0%
! AAGCAAAAGATAATTGAAGA+TGG - chr1_2:12347944-12347963 None:intergenic 25.0%
!! TGTTTTTCTGTGTGATATTT+AGG + chr1_2:12347994-12348013 Msa0056690:intron 25.0%
!!! TGTTTTGGAAAAATATTCAC+AGG + chr1_2:12348208-12348227 Msa0056690:intron 25.0%
! TACGTATTTATATATGTGTG+TGG - chr1_2:12348383-12348402 None:intergenic 25.0%
! ACATATATAAATACGTACGT+AGG + chr1_2:12348386-12348405 Msa0056690:intron 25.0%
! ATGAATCTTTCTTCGAATAT+CGG + chr1_2:12348417-12348436 Msa0056690:intron 25.0%
! AGAGTATAAAATCATATTCC+CGG - chr1_2:12348445-12348464 None:intergenic 25.0%
! AGTACAAATATACAGCTTTA+GGG - chr1_2:12348476-12348495 None:intergenic 25.0%
! AATCAAATAAAAACGTTACG+GGG - chr1_2:12348578-12348597 None:intergenic 25.0%
!! TTTTTGTTGATATGCTATCT+TGG + chr1_2:12348846-12348865 Msa0056690:intron 25.0%
!! CTGTATCAGTGAATTTTAAA+CGG - chr1_2:12349283-12349302 None:intergenic 25.0%
! CATATAATTTATACACCACA+GGG - chr1_2:12349333-12349352 None:intergenic 25.0%
! TCATATAATTTATACACCAC+AGG - chr1_2:12349334-12349353 None:intergenic 25.0%
!!! TCGTAATTTTCTAGTTATAC+AGG + chr1_2:12349362-12349381 Msa0056690:intron 25.0%
!!! CGTAATTTTCTAGTTATACA+GGG + chr1_2:12349363-12349382 Msa0056690:intron 25.0%
!!! GTAATTTTCTAGTTATACAG+GGG + chr1_2:12349364-12349383 Msa0056690:intron 25.0%
!!! CTGATTTTGTTTGTAGAAAA+TGG + chr1_2:12349415-12349434 Msa0056690:intron 25.0%
! AAGTCAAATAAGAAGTTATC+AGG - chr1_2:12349492-12349511 None:intergenic 25.0%
! ATCAAACTATACAGTAACTT+AGG - chr1_2:12349750-12349769 None:intergenic 25.0%
! TTGACTTCAAATTGTCAAAA+AGG + chr1_2:12349822-12349841 Msa0056690:intron 25.0%
! TGACTTCAAATTGTCAAAAA+GGG + chr1_2:12349823-12349842 Msa0056690:intron 25.0%
!! CAAGAGTATATGAAAATGTA+AGG + chr1_2:12349879-12349898 Msa0056690:intron 25.0%
!!! GATTTAAGTTGTGTGAAAAT+TGG + chr1_2:12349923-12349942 Msa0056690:intron 25.0%
! GTATTACTTATGGTATGATT+TGG - chr1_2:12349952-12349971 None:intergenic 25.0%
! GTAATACGATTAAACTATCT+TGG + chr1_2:12349965-12349984 Msa0056690:intron 25.0%
! AATTGAATGAGTGATTTGAT+GGG - chr1_2:12350139-12350158 None:intergenic 25.0%
! CATTTGAACTATTTAAACCT+AGG - chr1_2:12350626-12350645 None:intergenic 25.0%
!!! GGCAGTTTAGTTAATTTTTT+TGG + chr1_2:12350870-12350889 Msa0056690:intron 25.0%
!! ACAATTGGCCTAATTTAATT+TGG + chr1_2:12351055-12351074 Msa0056690:intron 25.0%
!! CAATTGGCCTAATTTAATTT+GGG + chr1_2:12351056-12351075 Msa0056690:intron 25.0%
! AGTCTTAATATTCTGTTAGT+AGG - chr1_2:12351115-12351134 None:intergenic 25.0%
! CAATTATTTCATCATAAACC+GGG - chr1_2:12351304-12351323 None:intergenic 25.0%
! AAAAAAAAAAATTACGCCGA+TGG - chr1_2:12351412-12351431 None:intergenic 25.0%
! AATTGATTGAAAATTTGCCT+TGG - chr1_2:12351593-12351612 None:intergenic 25.0%
!! GCAAATTTTCAATCAATTGA+AGG + chr1_2:12351595-12351614 Msa0056690:intron 25.0%
!! AAATGTTTTCTTCTGGATTT+AGG + chr1_2:12351733-12351752 Msa0056690:intron 25.0%
!! AATGTTTTCTTCTGGATTTA+GGG + chr1_2:12351734-12351753 Msa0056690:intron 25.0%
!!! TGTGTTTCTGCATTTTTTTA+AGG + chr1_2:12351983-12352002 Msa0056690:intron 25.0%
! CATATACACAAAACAAACAT+TGG - chr1_2:12352229-12352248 None:intergenic 25.0%
!!! TTAATTACACCAGTTTTAAC+TGG + chr1_2:12352262-12352281 Msa0056690:intron 25.0%
!!! TAATTACACCAGTTTTAACT+GGG + chr1_2:12352263-12352282 Msa0056690:intron 25.0%
! TTTCAACTGATACAATTTGA+TGG + chr1_2:12352452-12352471 Msa0056690:intron 25.0%
!! AATTTTCCTTCCAAATCAAT+TGG + chr1_2:12352525-12352544 Msa0056690:intron 25.0%
!!! GAATAAATGTTTTTAGCGTA+AGG + chr1_2:12352753-12352772 Msa0056690:intron 25.0%
!! ATAAACCCTTTTTATGAATG+TGG + chr1_2:12352776-12352795 Msa0056690:intron 25.0%
! AGAAATAAAGGACATTGAAA+GGG - chr1_2:12353197-12353216 None:intergenic 25.0%
! AAGAAATAAAGGACATTGAA+AGG - chr1_2:12353198-12353217 None:intergenic 25.0%
! TTGAATCCTAAAACAGAAAA+AGG + chr1_2:12353318-12353337 Msa0056690:intron 25.0%
!! TTTTCTCCTTTTTCTGTTTT+AGG - chr1_2:12353327-12353346 None:intergenic 25.0%
!!! TTAATTACACCAGTTTTAAC+GGG + chr1_2:12352262-12352281 Msa0056690:intron 25.0%
!! TTTCAACTGATACATTTTGA+TGG + chr1_2:12354136-12354155 Msa0056690:intron 25.0%
!!! CATTCTCTTTTTTCAGTTTT+AGG - chr1_2:12354641-12354660 None:intergenic 25.0%
! CTAAAACTGAAAAAAGAGAA+TGG + chr1_2:12354639-12354658 Msa0056690:intron 25.0%
! GAAAAAAGAGAATGGAATTA+TGG + chr1_2:12354647-12354666 Msa0056690:intron 25.0%
! ATAATTACATGAATGATGCA+AGG + chr1_2:12354681-12354700 Msa0056690:intron 25.0%
!!! TAGCGTTGTTTTAAATGAAA+TGG + chr1_2:12354918-12354937 Msa0056690:intron 25.0%
! ATCCTGTATACCAAATTAAA+GGG - chr1_2:12355255-12355274 None:intergenic 25.0%
! TATCCTGTATACCAAATTAA+AGG - chr1_2:12355256-12355275 None:intergenic 25.0%
! ATCACCTAATAAAAGTTCAA+GGG - chr1_2:12355309-12355328 None:intergenic 25.0%
! TATCACCTAATAAAAGTTCA+AGG - chr1_2:12355310-12355329 None:intergenic 25.0%
! ATGAATTACTGGTATACATT+TGG - chr1_2:12355557-12355576 None:intergenic 25.0%
! GAACAAAATTGATGAATTAC+TGG - chr1_2:12355568-12355587 None:intergenic 25.0%
!!! TCTTTTTTGTATATATAGGC+TGG + chr1_2:12355593-12355612 Msa0056690:three_prime_UTR 25.0%
!!! TATTAACTTAAGTCGACTTT+TGG - chr1_2:12355664-12355683 None:intergenic 25.0%
! AAACAAATTATCAGCTTTCA+GGG - chr1_2:12355696-12355715 None:intergenic 25.0%
!!! TGATAATTTGTTTGACCTAA+GGG + chr1_2:12355703-12355722 Msa0056690:three_prime_UTR 25.0%
ATTGAAACAAAGAGGGTTTA+AGG - chr1_2:12337196-12337215 None:intergenic 30.0%
GGTTTCTTATTGAAACAAAG+AGG - chr1_2:12337204-12337223 None:intergenic 30.0%
! TTATACGTTGGATTGGATAA+GGG - chr1_2:12337226-12337245 None:intergenic 30.0%
! CAGTTTTTCATTGTGTTTTG+AGG - chr1_2:12337315-12337334 None:intergenic 30.0%
GAAGAATAAACGGAAGAAAA+CGG + chr1_2:12337761-12337780 Msa0056690:CDS 30.0%
TTAACATCATCTTTAACCAC+AGG - chr1_2:12337837-12337856 None:intergenic 30.0%
GATGTTAAGAATGTGGATTT+AGG + chr1_2:12337849-12337868 Msa0056690:CDS 30.0%
AGAGATTAAGAGTGATGAAA+AGG + chr1_2:12337890-12337909 Msa0056690:CDS 30.0%
AGATGATGTTAAGATTTCTC+CGG + chr1_2:12337974-12337993 Msa0056690:CDS 30.0%
TAACTAATTACCATGTGTCT+AGG - chr1_2:12338150-12338169 None:intergenic 30.0%
TTAGTTACTGACATGTAGAT+AGG + chr1_2:12338167-12338186 Msa0056690:intron 30.0%
TAGTTACTGACATGTAGATA+GGG + chr1_2:12338168-12338187 Msa0056690:intron 30.0%
TTATTCCACAATTCACTGTT+TGG - chr1_2:12338499-12338518 None:intergenic 30.0%
CTCTTAAATAGTGGTTATTG+CGG - chr1_2:12338556-12338575 None:intergenic 30.0%
CTAGAAATGCTCTTAAATAG+TGG - chr1_2:12338565-12338584 None:intergenic 30.0%
TGAAACTAGAACAAAAACTG+TGG + chr1_2:12338657-12338676 Msa0056690:intron 30.0%
ATTATTCGCCTAATTAAAGG+GGG + chr1_2:12338731-12338750 Msa0056690:intron 30.0%
!!! TTTTTTCTCCCCCTTTAATT+AGG - chr1_2:12338742-12338761 None:intergenic 30.0%
!! AGAAAAAACAAGGTATTGGA+TGG + chr1_2:12338754-12338773 Msa0056690:intron 30.0%
!! GAAAAAACAAGGTATTGGAT+GGG + chr1_2:12338755-12338774 Msa0056690:intron 30.0%
!! AAAAAACAAGGTATTGGATG+GGG + chr1_2:12338756-12338775 Msa0056690:intron 30.0%
TTTAAGGATTGATGCTAACA+TGG + chr1_2:12338974-12338993 Msa0056690:intron 30.0%
!!! AGTTTCTTTTGAAGTGGTAA+CGG - chr1_2:12339019-12339038 None:intergenic 30.0%
TACCACTTCAAAAGAAACTA+CGG + chr1_2:12339020-12339039 Msa0056690:CDS 30.0%
TATTGAGATGTTACAACAAC+AGG + chr1_2:12339680-12339699 Msa0056690:CDS 30.0%
ATTGAGATGTTACAACAACA+GGG + chr1_2:12339681-12339700 Msa0056690:CDS 30.0%
TTAACATTTCGCCATTACTT+TGG + chr1_2:12339856-12339875 Msa0056690:CDS 30.0%
TCTAATATGTGATAGAGAAC+TGG + chr1_2:12339932-12339951 Msa0056690:CDS 30.0%
AATTGATCAATTCAAACCCA+AGG + chr1_2:12339956-12339975 Msa0056690:CDS 30.0%
AATTCAAACCCAAGGAATAT+TGG + chr1_2:12339964-12339983 Msa0056690:CDS 30.0%
! TGTTTGAATTGAAATGGGTT+AGG - chr1_2:12340055-12340074 None:intergenic 30.0%
! AATCAATTTTCGGTTACTTC+TGG + chr1_2:12340080-12340099 Msa0056690:CDS 30.0%
AATAAATTCTGCAGACTTTC+GGG + chr1_2:12340130-12340149 Msa0056690:CDS 30.0%
GTTGATGTTATATAAGGTGT+TGG - chr1_2:12340194-12340213 None:intergenic 30.0%
TGCTGAGAAATTCAATTTGT+TGG - chr1_2:12340234-12340253 None:intergenic 30.0%
!! AACAATATCTGTTTTTCCTG+TGG + chr1_2:12340329-12340348 Msa0056690:intron 30.0%
ATAACATACATCAGAACTGA+TGG + chr1_2:12340481-12340500 Msa0056690:CDS 30.0%
ACAATATTCATGCAACCAAA+GGG - chr1_2:12340522-12340541 None:intergenic 30.0%
!!! ATATTTTGAGATGACATGGT+CGG - chr1_2:12340625-12340644 None:intergenic 30.0%
!!! GGATATATTTTGAGATGACA+TGG - chr1_2:12340629-12340648 None:intergenic 30.0%
AGTAATACAATACAAAGAGG+AGG - chr1_2:12340650-12340669 None:intergenic 30.0%
TATGTCATGCATCTTATTCT+TGG + chr1_2:12340703-12340722 Msa0056690:intron 30.0%
ACATTACCTTTCAATGATCA+GGG - chr1_2:12340940-12340959 None:intergenic 30.0%
TTCAGTGTAATTACAAGTGT+CGG + chr1_2:12341147-12341166 Msa0056690:intron 30.0%
ATATGTTTCTCTAGTTGAGT+TGG + chr1_2:12341427-12341446 Msa0056690:intron 30.0%
! CTAAAGCAACTTTTATTGTG+AGG - chr1_2:12341540-12341559 None:intergenic 30.0%
! CTCACAATAAAAGTTGCTTT+AGG + chr1_2:12341538-12341557 Msa0056690:intron 30.0%
AGAAGAACTAAGAAAGAAGA+AGG + chr1_2:12341832-12341851 Msa0056690:intron 30.0%
! AAGAGGACATTTCAGTTTTA+GGG + chr1_2:12341945-12341964 Msa0056690:intron 30.0%
AGGGTTTACATTTCACATAA+TGG + chr1_2:12341964-12341983 Msa0056690:intron 30.0%
GGGTTTACATTTCACATAAT+GGG + chr1_2:12341965-12341984 Msa0056690:intron 30.0%
AATAATACTTCGCAAAGAGT+TGG - chr1_2:12342003-12342022 None:intergenic 30.0%
!! TCCGCCAAAGTATTTTAAAA+AGG + chr1_2:12342352-12342371 Msa0056690:CDS 30.0%
AGAAGTAATATTGTTAGCTC+TGG - chr1_2:12342490-12342509 None:intergenic 30.0%
TATAAGTGTGTATAGCTTCA+AGG - chr1_2:12342557-12342576 None:intergenic 30.0%
TGAAGCTATACACACTTATA+TGG + chr1_2:12342557-12342576 Msa0056690:CDS 30.0%
! AGAGAGAAGTATAAAGAAAG+TGG + chr1_2:12342809-12342828 Msa0056690:intron 30.0%
!!! GAATGAACTGTTTGGTTTTT+TGG - chr1_2:12343115-12343134 None:intergenic 30.0%
TGCAGATAAGTTATATTGTG+AGG + chr1_2:12343316-12343335 Msa0056690:intron 30.0%
!! TAAGCCTTGTTAAACTAAGT+GGG - chr1_2:12343656-12343675 None:intergenic 30.0%
! GTATCAAAGACTATCGTTTT+GGG + chr1_2:12343901-12343920 Msa0056690:intron 30.0%
TATTTAATCAATGTGGGACT+TGG - chr1_2:12343977-12343996 None:intergenic 30.0%
! GGCCTTATATTTAATCAATG+TGG - chr1_2:12343984-12344003 None:intergenic 30.0%
ACTCTTTATAAACTCTAGTC+AGG - chr1_2:12344005-12344024 None:intergenic 30.0%
TGACTAGAGTTTATAAAGAG+TGG + chr1_2:12344004-12344023 Msa0056690:intron 30.0%
CTTGATAAAAAGAGACTTAC+GGG + chr1_2:12344164-12344183 Msa0056690:intron 30.0%
CCTCACATATTTATACAGAA+AGG - chr1_2:12344228-12344247 None:intergenic 30.0%
CCTTTCTGTATAAATATGTG+AGG + chr1_2:12344225-12344244 Msa0056690:intron 30.0%
CTTGATAAAAAGAGACTTAC+GGG + chr1_2:12344164-12344183 Msa0056690:intron 30.0%
! TACTGTACCTTTAAAAGAGT+AGG + chr1_2:12344587-12344606 Msa0056690:intron 30.0%
AAGCAGTGTATACAAACAAA+GGG - chr1_2:12344834-12344853 None:intergenic 30.0%
AAAGCAGTGTATACAAACAA+AGG - chr1_2:12344835-12344854 None:intergenic 30.0%
!! TTTGTATACACTGCTTTTCT+TGG + chr1_2:12344838-12344857 Msa0056690:intron 30.0%
!! GTCCTTTTAAAAGCAACATA+AGG - chr1_2:12344867-12344886 None:intergenic 30.0%
AGACAAACTTTAAATCCAAG+CGG - chr1_2:12345075-12345094 None:intergenic 30.0%
ACACTGATCACTTAGTAAAT+AGG + chr1_2:12345164-12345183 Msa0056690:intron 30.0%
TAGTAAATAGGTTTATAGGG+GGG + chr1_2:12345176-12345195 Msa0056690:intron 30.0%
TACATAACAAACCTAGCATA+AGG - chr1_2:12345298-12345317 None:intergenic 30.0%
TGTCAAAAAATAACGCAATC+GGG - chr1_2:12345422-12345441 None:intergenic 30.0%
AATAAAAGTCAATGAGGGAA+AGG - chr1_2:12345499-12345518 None:intergenic 30.0%
TGATATTGGAATCCTAACAA+CGG + chr1_2:12345739-12345758 Msa0056690:intron 30.0%
ATATTGCATTATAACATGCC+TGG + chr1_2:12345784-12345803 Msa0056690:intron 30.0%
ATTGCTAGGTTTCAAAATGT+TGG + chr1_2:12345839-12345858 Msa0056690:intron 30.0%
TGTAGTATGATCTTAATAGC+TGG + chr1_2:12345911-12345930 Msa0056690:intron 30.0%
AATACCCATTTCCTTTAGTT+GGG + chr1_2:12345949-12345968 Msa0056690:intron 30.0%
AAATGAATTAACAGAGATGC+AGG - chr1_2:12346096-12346115 None:intergenic 30.0%
TGTTTCACACTTAGTAATCT+TGG + chr1_2:12346146-12346165 Msa0056690:intron 30.0%
GTTTCACACTTAGTAATCTT+GGG + chr1_2:12346147-12346166 Msa0056690:intron 30.0%
ATATTGAGTTCAACATGAAC+TGG + chr1_2:12346393-12346412 Msa0056690:intron 30.0%
ATATTGAGTTCAACATGAAC+TGG + chr1_2:12346393-12346412 Msa0056690:intron 30.0%
! TTATGCTATTTGCATGTCAT+AGG + chr1_2:12346667-12346686 Msa0056690:intron 30.0%
TTAAGAAACTTGAAGAGCTT+GGG + chr1_2:12346690-12346709 Msa0056690:CDS 30.0%
ATAGGCTATTCTAACCTAAT+GGG - chr1_2:12347249-12347268 None:intergenic 30.0%
TATAGGCTATTCTAACCTAA+TGG - chr1_2:12347250-12347269 None:intergenic 30.0%
AACCACTAACGTGTTTATAT+AGG - chr1_2:12347267-12347286 None:intergenic 30.0%
GTATTGTAGCTTGAAATTAG+AGG - chr1_2:12347347-12347366 None:intergenic 30.0%
TGTTACCTTTATTGTACATG+CGG + chr1_2:12347558-12347577 Msa0056690:intron 30.0%
!!! TTGACTCGGATTTCTTTTAT+GGG - chr1_2:12347615-12347634 None:intergenic 30.0%
! ATGTCATTTCCTATGCATTA+TGG - chr1_2:12347674-12347693 None:intergenic 30.0%
TATAAAAGGCTCATTGAAGA+GGG - chr1_2:12347791-12347810 None:intergenic 30.0%
ATATAAAAGGCTCATTGAAG+AGG - chr1_2:12347792-12347811 None:intergenic 30.0%
ATGTACAATACGAAACCAAA+AGG - chr1_2:12347898-12347917 None:intergenic 30.0%
CTTAAGTTATGCAAAATCCT+AGG + chr1_2:12348150-12348169 Msa0056690:intron 30.0%
! TTCATGGTAATGAAAAAGAG+GGG - chr1_2:12348254-12348273 None:intergenic 30.0%
! CTTCATGGTAATGAAAAAGA+GGG - chr1_2:12348255-12348274 None:intergenic 30.0%
! TTTTTCATTACCATGAAGGT+TGG + chr1_2:12348257-12348276 Msa0056690:intron 30.0%
! TTTTCATTACCATGAAGGTT+GGG + chr1_2:12348258-12348277 Msa0056690:intron 30.0%
GAGTATAAAATCATATTCCC+GGG - chr1_2:12348444-12348463 None:intergenic 30.0%
!! TACAAATATACAGCTTTAGG+GGG - chr1_2:12348474-12348493 None:intergenic 30.0%
! GTACAAATATACAGCTTTAG+GGG - chr1_2:12348475-12348494 None:intergenic 30.0%
CAGTACAAATATACAGCTTT+AGG - chr1_2:12348477-12348496 None:intergenic 30.0%
GAATATGAACATCAGAAGTA+CGG - chr1_2:12348766-12348785 None:intergenic 30.0%
TAACATGACATAACTTACCT+TGG - chr1_2:12349065-12349084 None:intergenic 30.0%
AGGTAAGTTATGTCATGTTA+TGG + chr1_2:12349065-12349084 Msa0056690:intron 30.0%
GCATAAACATAGAATCATGA+GGG - chr1_2:12349131-12349150 None:intergenic 30.0%
AGCATAAACATAGAATCATG+AGG - chr1_2:12349132-12349151 None:intergenic 30.0%
! TCTCTTTTACGACAAAAGTA+CGG - chr1_2:12349156-12349175 None:intergenic 30.0%
! CTTTTAACAGTTTGACAGTA+AGG - chr1_2:12349202-12349221 None:intergenic 30.0%
! TACTTATTGGTTGTGAAACT+TGG + chr1_2:12349236-12349255 Msa0056690:intron 30.0%
CAAATACTGTTTACTAGGAA+AGG - chr1_2:12349306-12349325 None:intergenic 30.0%
GAATATCTGACAAACAAATC+AGG - chr1_2:12349468-12349487 None:intergenic 30.0%
!! TTTGACTTGTTTCAGTTGTA+CGG + chr1_2:12349504-12349523 Msa0056690:intron 30.0%
! AAAGTAAGTAGATTTGGTTC+TGG + chr1_2:12349544-12349563 Msa0056690:CDS 30.0%
ATACTACATATCTGCTTTGT+AGG + chr1_2:12349612-12349631 Msa0056690:intron 30.0%
!! TGTATGCTACTTTACACATT+TGG + chr1_2:12349682-12349701 Msa0056690:intron 30.0%
ACTTTACACATTTGGAAGAA+TGG + chr1_2:12349690-12349709 Msa0056690:intron 30.0%
GTCAAATGATTAATTGCACA+TGG - chr1_2:12349807-12349826 None:intergenic 30.0%
GACTTCAAATTGTCAAAAAG+GGG + chr1_2:12349824-12349843 Msa0056690:intron 30.0%
GAATTGAATGAGTGATTTGA+TGG - chr1_2:12350140-12350159 None:intergenic 30.0%
! CAAGCTCATGTAGATATTTT+AGG + chr1_2:12350381-12350400 Msa0056690:intron 30.0%
! TACTTGTGATTTCTGAAAAC+AGG + chr1_2:12350517-12350536 Msa0056690:intron 30.0%
! TAAAACATATTATGGTGACG+AGG + chr1_2:12350548-12350567 Msa0056690:CDS 30.0%
!!! TCCTCTATCATAGTTTTGTT+TGG - chr1_2:12350594-12350613 None:intergenic 30.0%
! CTATTTAAACCTAGGACTTT+TGG - chr1_2:12350618-12350637 None:intergenic 30.0%
TTCAAATGAAAAGGTAACCT+TGG + chr1_2:12350638-12350657 Msa0056690:intron 30.0%
!! CATTTTTCAAAAGAACCTGA+GGG - chr1_2:12350744-12350763 None:intergenic 30.0%
!! CTTTTGAAAAATGGTCCTTA+TGG + chr1_2:12350751-12350770 Msa0056690:CDS 30.0%
AGTTGAACATAGATTCCATA+AGG - chr1_2:12350769-12350788 None:intergenic 30.0%
TATGGAATCTATGTTCAACT+CGG + chr1_2:12350769-12350788 Msa0056690:CDS 30.0%
! TAAGGAACAGATGTTCTTTT+AGG - chr1_2:12350817-12350836 None:intergenic 30.0%
GATGACTCATAATAGACATT+CGG - chr1_2:12351000-12351019 None:intergenic 30.0%
CTGACATTTACATGTCTAAT+AGG + chr1_2:12351086-12351105 Msa0056690:intron 30.0%
ACATTTACATGTCTAATAGG+CGG + chr1_2:12351089-12351108 Msa0056690:intron 30.0%
! CATAAAATGTGGGTTATTTC+AGG + chr1_2:12351151-12351170 Msa0056690:intron 30.0%
!! GTTATTTCAGGTTAAGGATT+TGG + chr1_2:12351163-12351182 Msa0056690:intron 30.0%
GTTATGATGTATGACAATCT+TGG + chr1_2:12351339-12351358 Msa0056690:intron 30.0%
TCATACCTCATTAATTGATG+CGG + chr1_2:12351492-12351511 Msa0056690:intron 30.0%
TGGAAAACCTGTCATATTAA+AGG + chr1_2:12351772-12351791 Msa0056690:CDS 30.0%
TGAAACTACAATAGTACCTT+AGG - chr1_2:12351848-12351867 None:intergenic 30.0%
TAGCTATGAAAGGAACAATA+TGG + chr1_2:12351927-12351946 Msa0056690:intron 30.0%
ATGAAAGGAACATGACTAAA+TGG + chr1_2:12352081-12352100 Msa0056690:intron 30.0%
TAAATGGATGTGAAAGGAAA+TGG + chr1_2:12352097-12352116 Msa0056690:intron 30.0%
ACTCTGGATACCAATTTAAA+GGG - chr1_2:12352309-12352328 None:intergenic 30.0%
TACTCTGGATACCAATTTAA+AGG - chr1_2:12352310-12352329 None:intergenic 30.0%
ATCGCCTGATAAAAATTCAA+GGG - chr1_2:12352363-12352382 None:intergenic 30.0%
TATCGCCTGATAAAAATTCA+AGG - chr1_2:12352364-12352383 None:intergenic 30.0%
ATCAGTTGAAAGAAAATCAC+AGG - chr1_2:12352443-12352462 None:intergenic 30.0%
TTTCCATCACTGTCAAAATT+GGG - chr1_2:12352507-12352526 None:intergenic 30.0%
ATTTCCATCACTGTCAAAAT+TGG - chr1_2:12352508-12352527 None:intergenic 30.0%
AGTTGCTCAATTTGATTCTA+TGG - chr1_2:12352586-12352605 None:intergenic 30.0%
TGTTAAAGGAACTTGACTAA+AGG - chr1_2:12352645-12352664 None:intergenic 30.0%
TGAAATCTTTAATTGCCATG+TGG - chr1_2:12352676-12352695 None:intergenic 30.0%
TGCTTCCACATTCATAAAAA+GGG - chr1_2:12352784-12352803 None:intergenic 30.0%
TCAAAAATTGTATTGGAGGA+GGG - chr1_2:12353116-12353135 None:intergenic 30.0%
GAAATAAAGGACATTGAAAG+GGG - chr1_2:12353196-12353215 None:intergenic 30.0%
AATAGAACCTGTAATAGTGT+CGG - chr1_2:12353300-12353319 None:intergenic 30.0%
ATGGCAATGAAGGATTTAAA+TGG - chr1_2:12353730-12353749 None:intergenic 30.0%
!! TGGATACCATTTTAAAAGGA+GGG - chr1_2:12353992-12354011 None:intergenic 30.0%
! ACTCTGGATACCATTTTAAA+AGG - chr1_2:12353996-12354015 None:intergenic 30.0%
ATCGCCTGATAAAAATTCAA+GGG - chr1_2:12352363-12352382 None:intergenic 30.0%
TATCGCCTGATAAAAATTCA+AGG - chr1_2:12352364-12352383 None:intergenic 30.0%
ATCAGTTGAAAGAAAATCAC+AGG - chr1_2:12352443-12352462 None:intergenic 30.0%
!!! ACATTTTGATGGTGAGTATT+AGG + chr1_2:12354147-12354166 Msa0056690:intron 30.0%
!! TTCTGACTAAATTTTGACAG+TGG + chr1_2:12354193-12354212 Msa0056690:intron 30.0%
GCTCAATTTGATTCTATAGT+TGG - chr1_2:12354277-12354296 None:intergenic 30.0%
GTTAAAGGAACTTGACTAAA+TGG - chr1_2:12352644-12352663 None:intergenic 30.0%
CACGTTCATAAAAACTGAAA+GGG - chr1_2:12354479-12354498 None:intergenic 30.0%
AATAGAACCTGTAATAGTGT+CGG - chr1_2:12353300-12353319 None:intergenic 30.0%
ATGGCAATGAAGGATTTAAA+TGG - chr1_2:12353730-12353749 None:intergenic 30.0%
ATATTGTCAGGTTTCTTTCA+CGG - chr1_2:12355029-12355048 None:intergenic 30.0%
AAGAAACCTGACAATATAGA+TGG + chr1_2:12355032-12355051 Msa0056690:intron 30.0%
AGAAACCTGACAATATAGAT+GGG + chr1_2:12355033-12355052 Msa0056690:intron 30.0%
AATATAGATGGGAAAGGAAA+TGG + chr1_2:12355044-12355063 Msa0056690:intron 30.0%
TGTATACCAAATTAAAGGGA+GGG - chr1_2:12355251-12355270 None:intergenic 30.0%
! TTTTCATAGGTGATTTCACT+TGG - chr1_2:12355284-12355303 None:intergenic 30.0%
AAGTGAAATCACCTATGAAA+AGG + chr1_2:12355283-12355302 Msa0056690:CDS 30.0%
!! AGCTTAATAAGATTTTGACC+TGG + chr1_2:12355382-12355401 Msa0056690:exon 30.0%
TCCATAGAAGAATCTTCATT+TGG - chr1_2:12355533-12355552 None:intergenic 30.0%
CAAACAAATTATCAGCTTTC+AGG - chr1_2:12355697-12355716 None:intergenic 30.0%
!! CTGATAATTTGTTTGACCTA+AGG + chr1_2:12355702-12355721 Msa0056690:three_prime_UTR 30.0%
ATAAAAGAATGTCAACCCTT+AGG - chr1_2:12355721-12355740 None:intergenic 30.0%
TATTGTGAATTTATGGTGAG+TGG - chr1_2:12355773-12355792 None:intergenic 30.0%
! TATACGTTGGATTGGATAAG+GGG - chr1_2:12337225-12337244 None:intergenic 35.0%
! CTTATACGTTGGATTGGATA+AGG - chr1_2:12337227-12337246 None:intergenic 35.0%
TATAAGCTCTGCTTATACGT+TGG - chr1_2:12337238-12337257 None:intergenic 35.0%
! TTTAAGGCGATAATTGCAAG+TGG - chr1_2:12337272-12337291 None:intergenic 35.0%
!!! CATTGTGTTTTGAGGGTTTT+TGG - chr1_2:12337307-12337326 None:intergenic 35.0%
ATGTTAGTTACATTCACGTG+CGG - chr1_2:12337573-12337592 None:intergenic 35.0%
TGAATGAACGGATAGGAAAA+CGG - chr1_2:12337614-12337633 None:intergenic 35.0%
!! TGTTGATAACGCTGAATGAA+CGG - chr1_2:12337626-12337645 None:intergenic 35.0%
GTTAACAGACGTAACGTTAA+CGG - chr1_2:12337676-12337695 None:intergenic 35.0%
! GTTACGTCTGTTAACAGTTT+TGG + chr1_2:12337681-12337700 Msa0056690:intron 35.0%
TCGAAAAAACCGTCTTCAAA+AGG + chr1_2:12338038-12338057 Msa0056690:CDS 35.0%
CGAAAAAACCGTCTTCAAAA+GGG + chr1_2:12338039-12338058 Msa0056690:CDS 35.0%
AGGGAAGAAGACTAATTCAA+AGG + chr1_2:12338058-12338077 Msa0056690:CDS 35.0%
AAGTGATTGAATACACGTGT+CGG + chr1_2:12338210-12338229 Msa0056690:intron 35.0%
GAAATCAGTGTTGTCAATTG+CGG + chr1_2:12338269-12338288 Msa0056690:intron 35.0%
! AAATATCGGCTATAGTTGCA+CGG - chr1_2:12338343-12338362 None:intergenic 35.0%
TTGTACCAAACAGTGAATTG+TGG + chr1_2:12338491-12338510 Msa0056690:intron 35.0%
TACTAACTACAACAGCTTTG+GGG - chr1_2:12338683-12338702 None:intergenic 35.0%
GTACTAACTACAACAGCTTT+GGG - chr1_2:12338684-12338703 None:intergenic 35.0%
TGTACTAACTACAACAGCTT+TGG - chr1_2:12338685-12338704 None:intergenic 35.0%
TTAAAGGGGGAGAAAAAACA+AGG + chr1_2:12338744-12338763 Msa0056690:intron 35.0%
!!! CCACATGCTTGCAATTTTTT+GGG + chr1_2:12338874-12338893 Msa0056690:intron 35.0%
!! CATAAACCTTCTAGTTCACA+GGG + chr1_2:12338897-12338916 Msa0056690:intron 35.0%
TGAAACATTGCTATAGTGCT+TGG + chr1_2:12338945-12338964 Msa0056690:intron 35.0%
!!! TAGTGCTTGGTGTTGTTTTA+AGG + chr1_2:12338958-12338977 Msa0056690:intron 35.0%
!! ATCCGTAGTTTCTTTTGAAG+TGG - chr1_2:12339025-12339044 None:intergenic 35.0%
TTCTACAAGGTCGAAAAAGA+AGG + chr1_2:12339053-12339072 Msa0056690:CDS 35.0%
AAGGTTATTCAGAGATACCT+TGG + chr1_2:12339189-12339208 Msa0056690:intron 35.0%
AGACTTCATACATATCACCA+AGG - chr1_2:12339209-12339228 None:intergenic 35.0%
ACCATACTAAAATCATCGTC+GGG - chr1_2:12339285-12339304 None:intergenic 35.0%
CACCATACTAAAATCATCGT+CGG - chr1_2:12339286-12339305 None:intergenic 35.0%
!! ACGATGATTTTAGTATGGTG+TGG + chr1_2:12339286-12339305 Msa0056690:CDS 35.0%
!! CGATGATTTTAGTATGGTGT+GGG + chr1_2:12339287-12339306 Msa0056690:CDS 35.0%
TACTGGAAAACTAAGGTAAG+TGG - chr1_2:12339382-12339401 None:intergenic 35.0%
ATATAACCAACCAATGCTAC+TGG - chr1_2:12339399-12339418 None:intergenic 35.0%
AAATTCACATTAATCTCCCG+TGG - chr1_2:12339789-12339808 None:intergenic 35.0%
ACGGGAGATTAATGTGAATT+TGG + chr1_2:12339788-12339807 Msa0056690:CDS 35.0%
TCCATAGTCCAATATTCCTT+GGG - chr1_2:12339975-12339994 None:intergenic 35.0%
CTGCTCTTTGATACTAAACA+TGG - chr1_2:12340000-12340019 None:intergenic 35.0%
AGCAAGAAATGTTAAGTCCT+TGG - chr1_2:12340030-12340049 None:intergenic 35.0%
!! GATGTTATATAAGGTGTTGG+AGG - chr1_2:12340191-12340210 None:intergenic 35.0%
GATATTGTTCATTACAGCCA+TGG - chr1_2:12340318-12340337 None:intergenic 35.0%
ACTGACTAATGGTATATCAG+CGG + chr1_2:12340453-12340472 Msa0056690:CDS 35.0%
CACAATATTCATGCAACCAA+AGG - chr1_2:12340523-12340542 None:intergenic 35.0%
GTAAGATAACAGGAGATTAG+TGG - chr1_2:12340743-12340762 None:intergenic 35.0%
GCAATCTCATGTAAGATAAC+AGG - chr1_2:12340753-12340772 None:intergenic 35.0%
CACATTACCTTTCAATGATC+AGG - chr1_2:12340941-12340960 None:intergenic 35.0%
AGCATAAGCAGAAATAGGTA+TGG - chr1_2:12340971-12340990 None:intergenic 35.0%
TTGCAAGCATAAGCAGAAAT+AGG - chr1_2:12340976-12340995 None:intergenic 35.0%
! TACATTTTGCCTATGAAGCA+CGG + chr1_2:12341057-12341076 Msa0056690:intron 35.0%
TATGAAGCACAGACATTCTT+CGG - chr1_2:12341214-12341233 None:intergenic 35.0%
TTCCAAGGTTTGACAAAACA+CGG - chr1_2:12341261-12341280 None:intergenic 35.0%
TTTGTCAAACCTTGGAAGTA+TGG + chr1_2:12341264-12341283 Msa0056690:intron 35.0%
!! GCTTTAGGCCTCAAAATTTT+GGG + chr1_2:12341342-12341361 Msa0056690:intron 35.0%
!! AGTTGGTAAATGTGAAGTCA+TGG + chr1_2:12341444-12341463 Msa0056690:intron 35.0%
TTTAGGCCTCTAAACATGTT+GGG + chr1_2:12341555-12341574 Msa0056690:intron 35.0%
! GTAGTTCATTGGTGATTACA+GGG - chr1_2:12341585-12341604 None:intergenic 35.0%
AGAATACACCAAATTGTAGC+AGG - chr1_2:12341780-12341799 None:intergenic 35.0%
!! TGCTACAATTTGGTGTATTC+TGG + chr1_2:12341779-12341798 Msa0056690:intron 35.0%
AGGAAGAAGAAAGAAAACAC+AGG + chr1_2:12341852-12341871 Msa0056690:intron 35.0%
! GAAGAGGACATTTCAGTTTT+AGG + chr1_2:12341944-12341963 Msa0056690:intron 35.0%
AAGAACAGTTTCTTGTCAGA+TGG + chr1_2:12342582-12342601 Msa0056690:CDS 35.0%
AAAGACGTACTTCCAAGAAA+AGG + chr1_2:12342833-12342852 Msa0056690:intron 35.0%
AAAACTGCAACCTAGGAAAT+TGG + chr1_2:12342860-12342879 Msa0056690:intron 35.0%
TTTGGATGTTCCAATTTCCT+AGG - chr1_2:12342873-12342892 None:intergenic 35.0%
TCGGACATTAATAGAAAGGT+TGG - chr1_2:12342912-12342931 None:intergenic 35.0%
GGTTTCGGACATTAATAGAA+AGG - chr1_2:12342916-12342935 None:intergenic 35.0%
! CTCAAGACTTTATTTGACAC+AGG - chr1_2:12342994-12343013 None:intergenic 35.0%
ACCAAACAGTTCATTCCAAA+AGG + chr1_2:12343119-12343138 Msa0056690:intron 35.0%
!!! TCCTTTTGGAATGAACTGTT+TGG - chr1_2:12343123-12343142 None:intergenic 35.0%
! TCTGGAATCAGAAAGACATA+AGG - chr1_2:12343190-12343209 None:intergenic 35.0%
TTCCAGATACAACTTGATGT+TGG + chr1_2:12343203-12343222 Msa0056690:intron 35.0%
! TTCCAACATCAAGTTGTATC+TGG - chr1_2:12343208-12343227 None:intergenic 35.0%
CTGATCAGTCTATTGTGTTA+CGG + chr1_2:12343231-12343250 Msa0056690:CDS 35.0%
!! GATGTTATTTAGCCTTGTGA+TGG + chr1_2:12343340-12343359 Msa0056690:intron 35.0%
CATTATACTTATTCCTGCCA+AGG + chr1_2:12343421-12343440 Msa0056690:intron 35.0%
TACGAAATAGTGTGAATGCT+AGG + chr1_2:12343534-12343553 Msa0056690:intron 35.0%
TCGAGTATAGTGTCCAAATA+TGG + chr1_2:12343586-12343605 Msa0056690:intron 35.0%
ATGGCATAATTTGATCCATG+TGG + chr1_2:12343625-12343644 Msa0056690:intron 35.0%
!! AAGCCTTGTTAAACTAAGTG+GGG - chr1_2:12343655-12343674 None:intergenic 35.0%
!! CTAAGCCTTGTTAAACTAAG+TGG - chr1_2:12343657-12343676 None:intergenic 35.0%
TTTACCAGTTAGCTGCAATT+GGG + chr1_2:12343825-12343844 Msa0056690:intron 35.0%
!!! GGTAACAAGCTGGTTTTATA+AGG + chr1_2:12343846-12343865 Msa0056690:intron 35.0%
! GGTATCAAAGACTATCGTTT+TGG + chr1_2:12343900-12343919 Msa0056690:intron 35.0%
TCTATACTCTGTTGTGTTGT+GGG + chr1_2:12344136-12344155 Msa0056690:intron 35.0%
GGATTCTACGTAGTTTACAT+TGG + chr1_2:12344185-12344204 Msa0056690:intron 35.0%
ATAAATATGTGAGGCTGTGT+AGG + chr1_2:12344234-12344253 Msa0056690:intron 35.0%
CCTCACATACTTATACAGAA+AGG - chr1_2:12344431-12344450 None:intergenic 35.0%
CCTTTCTGTATAAGTATGTG+AGG + chr1_2:12344428-12344447 Msa0056690:intron 35.0%
! GTTTTCGACCAATTTTGTGT+AGG + chr1_2:12344466-12344485 Msa0056690:intron 35.0%
AACAGGAACCTACACAAAAT+TGG - chr1_2:12344477-12344496 None:intergenic 35.0%
!! TTGAAGCACTGATACTTAAC+AGG - chr1_2:12344494-12344513 None:intergenic 35.0%
GCTTCAAATGTTTAAGCACT+AGG + chr1_2:12344507-12344526 Msa0056690:intron 35.0%
TGGAGATACAAAACCATTCA+TGG - chr1_2:12344534-12344553 None:intergenic 35.0%
!! TTACTGGCCTACTCTTTTAA+AGG - chr1_2:12344597-12344616 None:intergenic 35.0%
!! TATGGTTCTTTTTCACTCCT+AGG + chr1_2:12344639-12344658 Msa0056690:intron 35.0%
CTCAAAAGCTAGATCATGAT+TGG - chr1_2:12344707-12344726 None:intergenic 35.0%
!!! CAATCATGATCTAGCTTTTG+AGG + chr1_2:12344705-12344724 Msa0056690:CDS 35.0%
!! TGCTTTTAAAAGGACTGTCT+TGG + chr1_2:12344872-12344891 Msa0056690:intron 35.0%
TAGTAGTTTCATGTCTTCCA+CGG + chr1_2:12344941-12344960 Msa0056690:intron 35.0%
! ATGATTTTGTGGTTAGGTGA+AGG + chr1_2:12345008-12345027 Msa0056690:intron 35.0%
! GAATTCCATTTTACCTTGTG+CGG + chr1_2:12345100-12345119 Msa0056690:intron 35.0%
AATTTCCGCACAAGGTAAAA+TGG - chr1_2:12345108-12345127 None:intergenic 35.0%
TAAAGCTTAATTTCCGCACA+AGG - chr1_2:12345116-12345135 None:intergenic 35.0%
ATGTCAGGGATCAACTTTAT+CGG + chr1_2:12345209-12345228 Msa0056690:intron 35.0%
ATAAATGGGAACTCACTGAT+TGG - chr1_2:12345335-12345354 None:intergenic 35.0%
AATCAGTGAGTTCCCATTTA+TGG + chr1_2:12345334-12345353 Msa0056690:intron 35.0%
CAACTTTCTGCACCATAAAT+GGG - chr1_2:12345349-12345368 None:intergenic 35.0%
ACAACTTTCTGCACCATAAA+TGG - chr1_2:12345350-12345369 None:intergenic 35.0%
GTTACATCTTGTTCAAACTG+AGG + chr1_2:12345536-12345555 Msa0056690:CDS 35.0%
GATATTGGAATCCTAACAAC+GGG + chr1_2:12345740-12345759 Msa0056690:intron 35.0%
GATGTATGTAACATACTTCC+AGG - chr1_2:12345805-12345824 None:intergenic 35.0%
CAATACCCATTTCCTTTAGT+TGG + chr1_2:12345948-12345967 Msa0056690:intron 35.0%
ATACCCATTTCCTTTAGTTG+GGG + chr1_2:12345950-12345969 Msa0056690:intron 35.0%
TTACCCCAACTAAAGGAAAT+GGG - chr1_2:12345956-12345975 None:intergenic 35.0%
ATTACCCCAACTAAAGGAAA+TGG - chr1_2:12345957-12345976 None:intergenic 35.0%
GTTCACCATTGAATTGAATC+AGG - chr1_2:12345981-12346000 None:intergenic 35.0%
! AATAGAAGTACACTGTTGGA+AGG - chr1_2:12346050-12346069 None:intergenic 35.0%
GCACAGGTTATAAAGTTTGA+GGG - chr1_2:12346195-12346214 None:intergenic 35.0%
AGCACAGGTTATAAAGTTTG+AGG - chr1_2:12346196-12346215 None:intergenic 35.0%
!! ATACTTGTTTATCGACTTCC+CGG + chr1_2:12346261-12346280 Msa0056690:intron 35.0%
GTTAAGAAACTTGAAGAGCT+TGG + chr1_2:12346689-12346708 Msa0056690:CDS 35.0%
! TCTCATTTGTTTCTTGCTTC+AGG + chr1_2:12346908-12346927 Msa0056690:intron 35.0%
! GAAATTCTGGAGAGATAACA+CGG - chr1_2:12346959-12346978 None:intergenic 35.0%
AAGAAGACTTCAACTGATGT+TGG + chr1_2:12347080-12347099 Msa0056690:intron 35.0%
! CTTTCAGTAGCTTGAACTTT+TGG + chr1_2:12347108-12347127 Msa0056690:intron 35.0%
AGCCTATATAAACACGTTAG+TGG + chr1_2:12347262-12347281 Msa0056690:intron 35.0%
AGGAAAAAAACTGCAGACAA+TGG - chr1_2:12347462-12347481 None:intergenic 35.0%
GCATGTACAATAAAGGTAAC+AGG - chr1_2:12347559-12347578 None:intergenic 35.0%
!!! CTTGACTCGGATTTCTTTTA+TGG - chr1_2:12347616-12347635 None:intergenic 35.0%
! CACTGTTTTCCATAATGCAT+AGG + chr1_2:12347662-12347681 Msa0056690:intron 35.0%
! CCTTCATGGTAATGAAAAAG+AGG - chr1_2:12348256-12348275 None:intergenic 35.0%
!! CCTCTTTTTCATTACCATGA+AGG + chr1_2:12348253-12348272 Msa0056690:intron 35.0%
GCAATTGTAATGTGACATCT+AGG + chr1_2:12348502-12348521 Msa0056690:intron 35.0%
!! TTTTGCTTACTGTCTGAGAT+AGG + chr1_2:12348598-12348617 Msa0056690:intron 35.0%
TTCTGATGTTCATATTCACC+AGG + chr1_2:12348769-12348788 Msa0056690:CDS 35.0%
ATGTTCATATTCACCAGGTT+TGG + chr1_2:12348774-12348793 Msa0056690:intron 35.0%
!!! TGCTGCACATTTTTTAATCC+AGG - chr1_2:12348926-12348945 None:intergenic 35.0%
! CAGTGAATTTTAAACGGTAG+TGG - chr1_2:12349277-12349296 None:intergenic 35.0%
GTCAGCAAATACTGTTTACT+AGG - chr1_2:12349311-12349330 None:intergenic 35.0%
!! TTTGGTTCTGGCTACTTTAT+AGG + chr1_2:12349556-12349575 Msa0056690:CDS 35.0%
TATAATACTCACTTGCACCT+CGG - chr1_2:12349595-12349614 None:intergenic 35.0%
GTGTGAAAATCACAACAGTT+AGG - chr1_2:12349651-12349670 None:intergenic 35.0%
TTACACATTTGGAAGAATGG+TGG + chr1_2:12349693-12349712 Msa0056690:intron 35.0%
!! GTTTTCAGTGGATTTTAGGT+AGG - chr1_2:12350087-12350106 None:intergenic 35.0%
!! CTCTGTTTTCAGTGGATTTT+AGG - chr1_2:12350091-12350110 None:intergenic 35.0%
! GGAAAAAACTCTGTTTTCAG+TGG - chr1_2:12350099-12350118 None:intergenic 35.0%
ATCACTCATTCAATTCGATG+AGG + chr1_2:12350144-12350163 Msa0056690:intron 35.0%
TCACTCATTCAATTCGATGA+GGG + chr1_2:12350145-12350164 Msa0056690:intron 35.0%
TCTAATCAACACTCCTTAAC+AGG - chr1_2:12350224-12350243 None:intergenic 35.0%
!! GTTAAGGAGTGTTGATTAGA+TGG + chr1_2:12350224-12350243 Msa0056690:intron 35.0%
! CTTTTGTGAGTCATGTCTAA+TGG - chr1_2:12350303-12350322 None:intergenic 35.0%
CATTAGACATGACTCACAAA+AGG + chr1_2:12350301-12350320 Msa0056690:intron 35.0%
! CTACATGAGCTTGATTTGAT+TGG - chr1_2:12350374-12350393 None:intergenic 35.0%
!!! ATCATAGTTTTGTTTGGCTG+AGG - chr1_2:12350588-12350607 None:intergenic 35.0%
GCCAAACAAAACTATGATAG+AGG + chr1_2:12350590-12350609 Msa0056690:CDS 35.0%
GTCCATTAAAACATACGACA+GGG - chr1_2:12350664-12350683 None:intergenic 35.0%
AGTCCATTAAAACATACGAC+AGG - chr1_2:12350665-12350684 None:intergenic 35.0%
!!! TGTCGTATGTTTTAATGGAC+TGG + chr1_2:12350664-12350683 Msa0056690:intron 35.0%
! ATTGGTATTTCTTTTCCCTC+AGG + chr1_2:12350726-12350745 Msa0056690:intron 35.0%
!! CCATTTTTCAAAAGAACCTG+AGG - chr1_2:12350745-12350764 None:intergenic 35.0%
!! CCTCAGGTTCTTTTGAAAAA+TGG + chr1_2:12350742-12350761 Msa0056690:intron 35.0%
AGAGGTTGAAAATGCTAGTA+AGG - chr1_2:12350846-12350865 None:intergenic 35.0%
! TAGCATTTTCAACCTCTTTC+AGG + chr1_2:12350849-12350868 Msa0056690:intron 35.0%
TTAACTAAACTGCCTGAAAG+AGG - chr1_2:12350864-12350883 None:intergenic 35.0%
CTAGAGGAGTGAAAGAAAAA+TGG - chr1_2:12350934-12350953 None:intergenic 35.0%
! CATTTTTCTTTCACTCCTCT+AGG + chr1_2:12350932-12350951 Msa0056690:intron 35.0%
ATAGACATTCGGTTGTCATT+TGG - chr1_2:12350989-12351008 None:intergenic 35.0%
AGACATGTAAATGTCAGATG+CGG - chr1_2:12351083-12351102 None:intergenic 35.0%
!! ATGTGGGTTATTTCAGGTTA+AGG + chr1_2:12351157-12351176 Msa0056690:intron 35.0%
ACTACAATATCCAGTGACAT+TGG + chr1_2:12351217-12351236 Msa0056690:CDS 35.0%
AACTGAACAAGAAAAGTCCA+AGG + chr1_2:12351573-12351592 Msa0056690:intron 35.0%
TTTGCGACCTTTAATATGAC+AGG - chr1_2:12351782-12351801 None:intergenic 35.0%
ATATTAAAGGTCGCAAAGCT+TGG + chr1_2:12351785-12351804 Msa0056690:CDS 35.0%
CTTGGCTATTCTATTAGACA+TGG + chr1_2:12351803-12351822 Msa0056690:CDS 35.0%
TACAATAGTACCTTAGGAAC+AGG - chr1_2:12351842-12351861 None:intergenic 35.0%
GTGGCAATGAAGGATTTAAA+TGG - chr1_2:12352048-12352067 None:intergenic 35.0%
CATGACTAAATGGATGTGAA+AGG + chr1_2:12352091-12352110 Msa0056690:intron 35.0%
ATATTATCAGATGGACGAGT+TGG - chr1_2:12352144-12352163 None:intergenic 35.0%
TCTGGATACCAATTTAAAGG+GGG - chr1_2:12352307-12352326 None:intergenic 35.0%
CTCTGGATACCAATTTAAAG+GGG - chr1_2:12352308-12352327 None:intergenic 35.0%
TATTCCAAGGTGATTTCACT+TGG - chr1_2:12352338-12352357 None:intergenic 35.0%
AAGTGAAATCACCTTGGAAT+AGG + chr1_2:12352337-12352356 Msa0056690:intron 35.0%
! TAGGCCCTTGAATTTTTATC+AGG + chr1_2:12352356-12352375 Msa0056690:intron 35.0%
!!! AAGCACTACTTGGTGTTTTT+GGG - chr1_2:12352410-12352429 None:intergenic 35.0%
!! ACAATTTGATGGTGAGTATG+AGG + chr1_2:12352463-12352482 Msa0056690:intron 35.0%
!! ATTCCCAATTTTGACAGTGA+TGG + chr1_2:12352501-12352520 Msa0056690:intron 35.0%
!! GTTGTTCCAATTGATTTGGA+AGG - chr1_2:12352534-12352553 None:intergenic 35.0%
TACGGTTGTTCCAATTGATT+TGG - chr1_2:12352538-12352557 None:intergenic 35.0%
AAATCAATTGGAACAACCGT+AGG + chr1_2:12352537-12352556 Msa0056690:intron 35.0%
AATCAATTGGAACAACCGTA+GGG + chr1_2:12352538-12352557 Msa0056690:intron 35.0%
AAGGAACTTGACTAAAGGAA+GGG - chr1_2:12352640-12352659 None:intergenic 35.0%
AAAGGAACTTGACTAAAGGA+AGG - chr1_2:12352641-12352660 None:intergenic 35.0%
CTGCTTCCACATTCATAAAA+AGG - chr1_2:12352785-12352804 None:intergenic 35.0%
GAGTACAAGACATCAACAAA+GGG - chr1_2:12352840-12352859 None:intergenic 35.0%
TGAGTACAAGACATCAACAA+AGG - chr1_2:12352841-12352860 None:intergenic 35.0%
TTTGGAGGTTGGAAAATAGA+GGG + chr1_2:12352952-12352971 Msa0056690:intron 35.0%
CTCAAAAATTGTATTGGAGG+AGG - chr1_2:12353117-12353136 None:intergenic 35.0%
GAGCTCAAAAATTGTATTGG+AGG - chr1_2:12353120-12353139 None:intergenic 35.0%
AGGGAGCTCAAAAATTGTAT+TGG - chr1_2:12353123-12353142 None:intergenic 35.0%
ACAAAATCCACCTCATTTGA+GGG - chr1_2:12353142-12353161 None:intergenic 35.0%
TACAAAATCCACCTCATTTG+AGG - chr1_2:12353143-12353162 None:intergenic 35.0%
GGAGCAAGTGAAAGAAATAA+AGG - chr1_2:12353209-12353228 None:intergenic 35.0%
GAATGATGCAAGAATCACAT+AGG + chr1_2:12353371-12353390 Msa0056690:intron 35.0%
!! CATATCACCAAGCATTGAAA+TGG + chr1_2:12353442-12353461 Msa0056690:intron 35.0%
TTAAATCCTTCATTGCCATG+TGG + chr1_2:12353731-12353750 Msa0056690:intron 35.0%
GTGAAAGAAACCTGACTATA+TGG + chr1_2:12353763-12353782 Msa0056690:intron 35.0%
TATATGGATGCGAAAGGAAA+TGG + chr1_2:12353779-12353798 Msa0056690:intron 35.0%
TTTAAAAGGAGGGAAAGTCA+AGG - chr1_2:12353982-12354001 None:intergenic 35.0%
!! GACTTTCCCTCCTTTTAAAA+TGG + chr1_2:12353983-12354002 Msa0056690:intron 35.0%
!! CTGGATACCATTTTAAAAGG+AGG - chr1_2:12353993-12354012 None:intergenic 35.0%
! TTTTCCAAGGTGATTTCACT+TGG - chr1_2:12354025-12354044 None:intergenic 35.0%
AAGTGAAATCACCTTGGAAA+AGG + chr1_2:12354024-12354043 Msa0056690:intron 35.0%
! AAGGCCCTTGAATTTTTATC+AGG + chr1_2:12354043-12354062 Msa0056690:intron 35.0%
AAGGAACTTGACTAAATGGA+GGG - chr1_2:12354335-12354354 None:intergenic 35.0%
AAAGGAACTTGACTAAATGG+AGG - chr1_2:12354336-12354355 None:intergenic 35.0%
TGAAATCATTAATTGCCGTG+TGG - chr1_2:12354371-12354390 None:intergenic 35.0%
CCACGTTCATAAAAACTGAA+AGG - chr1_2:12354480-12354499 None:intergenic 35.0%
! CCTTTCAGTTTTTATGAACG+TGG + chr1_2:12354477-12354496 Msa0056690:intron 35.0%
ATGGTTGAGTACATCAACAA+GGG - chr1_2:12354536-12354555 None:intergenic 35.0%
AATGGTTGAGTACATCAACA+AGG - chr1_2:12354537-12354556 None:intergenic 35.0%
TGAATGATGCAAGGATTTCA+TGG + chr1_2:12354690-12354709 Msa0056690:intron 35.0%
GAATGATGCAAGGATTTCAT+GGG + chr1_2:12354691-12354710 Msa0056690:intron 35.0%
CTGTATACCAAATTAAAGGG+AGG - chr1_2:12355252-12355271 None:intergenic 35.0%
!! CTCCCTTTAATTTGGTATAC+AGG + chr1_2:12355250-12355269 Msa0056690:intron 35.0%
! AAGGCCCTTGAACTTTTATT+AGG + chr1_2:12355302-12355321 Msa0056690:CDS 35.0%
ATAAAGTGAGAACTGTTGGT+CGG + chr1_2:12355327-12355346 Msa0056690:CDS 35.0%
! AGTGAGGGAAGATTCTTTTA+TGG + chr1_2:12355505-12355524 Msa0056690:three_prime_UTR 35.0%
GCCAAATGAAGATTCTTCTA+TGG + chr1_2:12355529-12355548 Msa0056690:three_prime_UTR 35.0%
! TCGACTTTTGGTACAACAAA+GGG - chr1_2:12355652-12355671 None:intergenic 35.0%
TTGGTGAGAAAGAGGGTTTA+AGG - chr1_2:12337288-12337307 None:intergenic 40.0%
!!! AGGGTTTTTGGTGAGAAAGA+GGG - chr1_2:12337295-12337314 None:intergenic 40.0%
ATAACGCTGAATGAACGGAT+AGG - chr1_2:12337621-12337640 None:intergenic 40.0%
!!! AGTTTTGGCTCTCCGTTTAA+TGG + chr1_2:12337696-12337715 Msa0056690:intron 40.0%
CTCCTTCCAACACCATTAAA+CGG - chr1_2:12337711-12337730 None:intergenic 40.0%
CGACGGAGAAGAAGAATAAA+CGG + chr1_2:12337751-12337770 Msa0056690:CDS 40.0%
TGTGAAATCTAGTGAACCTG+TGG + chr1_2:12337818-12337837 Msa0056690:CDS 40.0%
GAAGAAGAAGAAGAAGAAGC+CGG + chr1_2:12337935-12337954 Msa0056690:intron 40.0%
!! GTCTTCTTCCCTTTTGAAGA+CGG - chr1_2:12338050-12338069 None:intergenic 40.0%
ATTACCATGTGTCTAGGTGT+CGG - chr1_2:12338144-12338163 None:intergenic 40.0%
TTCTTCTGTGACACGCTATT+TGG - chr1_2:12338380-12338399 None:intergenic 40.0%
TTGTCAAATAACGGCTAGAG+TGG - chr1_2:12338467-12338486 None:intergenic 40.0%
GGGGAGAAAAAACAAGGTAT+TGG + chr1_2:12338750-12338769 Msa0056690:intron 40.0%
CACAATGCTAAGGCTATGTT+TGG - chr1_2:12338841-12338860 None:intergenic 40.0%
! CAAACATAGCCTTAGCATTG+TGG + chr1_2:12338839-12338858 Msa0056690:intron 40.0%
!!! GCCACATGCTTGCAATTTTT+TGG + chr1_2:12338873-12338892 Msa0056690:intron 40.0%
CCCAAAAAATTGCAAGCATG+TGG - chr1_2:12338877-12338896 None:intergenic 40.0%
!! GCATAAACCTTCTAGTTCAC+AGG + chr1_2:12338896-12338915 Msa0056690:intron 40.0%
!! GATGCTAACATGGTTTGTTC+AGG + chr1_2:12338984-12339003 Msa0056690:intron 40.0%
TACAAGGTCGAAAAAGAAGG+AGG + chr1_2:12339056-12339075 Msa0056690:CDS 40.0%
TTTCCCGTAAATTTCCCTAG+CGG - chr1_2:12339111-12339130 None:intergenic 40.0%
AAAACCATTGTATCCACCCA+TGG + chr1_2:12339128-12339147 Msa0056690:CDS 40.0%
AAACCATTGTATCCACCCAT+GGG + chr1_2:12339129-12339148 Msa0056690:CDS 40.0%
TATGAAGTCTTGCCAAGCTA+TGG + chr1_2:12339219-12339238 Msa0056690:CDS 40.0%
TCTCTTACATGACCATAGCT+TGG - chr1_2:12339234-12339253 None:intergenic 40.0%
CTATGGTCATGTAAGAGACT+TGG + chr1_2:12339236-12339255 Msa0056690:CDS 40.0%
ATGTAAGAGACTTGGCTTCA+AGG + chr1_2:12339244-12339263 Msa0056690:CDS 40.0%
!! ACCCGACGATGATTTTAGTA+TGG + chr1_2:12339281-12339300 Msa0056690:CDS 40.0%
CCAATGCTACTGGAAAACTA+AGG - chr1_2:12339389-12339408 None:intergenic 40.0%
!! CCTTAGTTTTCCAGTAGCAT+TGG + chr1_2:12339386-12339405 Msa0056690:intron 40.0%
!!! AGTTTTCCAGTAGCATTGGT+TGG + chr1_2:12339390-12339409 Msa0056690:intron 40.0%
! TGCTTTTATCCACTATTGCC+TGG + chr1_2:12339552-12339571 Msa0056690:intron 40.0%
AATTTAACGCACAGATAGCC+AGG - chr1_2:12339573-12339592 None:intergenic 40.0%
AAACTGCTTTGCAAACACCA+CGG + chr1_2:12339769-12339788 Msa0056690:CDS 40.0%
AGGGCCCTTGATTATTTGAT+TGG + chr1_2:12339831-12339850 Msa0056690:CDS 40.0%
ACATTTCGCCATTACTTTGG+AGG + chr1_2:12339859-12339878 Msa0056690:CDS 40.0%
GGTAACTTCCTCCAAAGTAA+TGG - chr1_2:12339870-12339889 None:intergenic 40.0%
ATTGAACTCTTCCTGCTGAT+TGG - chr1_2:12339899-12339918 None:intergenic 40.0%
ACCCAAGGAATATTGGACTA+TGG + chr1_2:12339971-12339990 Msa0056690:CDS 40.0%
CTCCATAGTCCAATATTCCT+TGG - chr1_2:12339976-12339995 None:intergenic 40.0%
CAAGGAATATTGGACTATGG+AGG + chr1_2:12339974-12339993 Msa0056690:CDS 40.0%
CAAAGAGCAGAGATTAACCA+AGG + chr1_2:12340010-12340029 Msa0056690:CDS 40.0%
! ATTTTCGGTTACTTCTGGTG+AGG + chr1_2:12340085-12340104 Msa0056690:CDS 40.0%
GTTATGTCAAGTAGGGAAGT+AGG - chr1_2:12340296-12340315 None:intergenic 40.0%
TTCCCTACTTGACATAACCA+TGG + chr1_2:12340298-12340317 Msa0056690:intron 40.0%
AGCCATGGTTATGTCAAGTA+GGG - chr1_2:12340303-12340322 None:intergenic 40.0%
CTGACTAATGGTATATCAGC+GGG + chr1_2:12340454-12340473 Msa0056690:CDS 40.0%
AACAGCGTCTTCAGAAATCT+AGG - chr1_2:12340904-12340923 None:intergenic 40.0%
AATGATCAGGGAGCGAATAT+TGG - chr1_2:12340928-12340947 None:intergenic 40.0%
!! GTAATTACAAGTGTCGGTGT+CGG + chr1_2:12341153-12341172 Msa0056690:intron 40.0%
!!! GGCTTTAGGCCTCAAAATTT+TGG + chr1_2:12341341-12341360 Msa0056690:intron 40.0%
CTTTAGGCCTCTAAACATGT+TGG + chr1_2:12341554-12341573 Msa0056690:intron 40.0%
! CGTAGTTCATTGGTGATTAC+AGG - chr1_2:12341586-12341605 None:intergenic 40.0%
TCACCAATGAACTACGACTT+TGG + chr1_2:12341590-12341609 Msa0056690:intron 40.0%
! GTAACAAACCCCTTTTACCT+TGG + chr1_2:12341737-12341756 Msa0056690:intron 40.0%
GAAGATCACCAAGGTAAAAG+GGG - chr1_2:12341748-12341767 None:intergenic 40.0%
CGAAGATCACCAAGGTAAAA+GGG - chr1_2:12341749-12341768 None:intergenic 40.0%
!! CCTTTTACCTTGGTGATCTT+CGG + chr1_2:12341747-12341766 Msa0056690:intron 40.0%
GCAACTTTCCTGCTACAATT+TGG + chr1_2:12341769-12341788 Msa0056690:intron 40.0%
CATTCTGTCTCAGCATTTGA+AGG - chr1_2:12341811-12341830 None:intergenic 40.0%
GATAAAGGTTTACAGCAGTG+CGG + chr1_2:12341898-12341917 Msa0056690:intron 40.0%
! CACAGTTGTTGGTTAGACTA+GGG - chr1_2:12342027-12342046 None:intergenic 40.0%
! TCACAGTTGTTGGTTAGACT+AGG - chr1_2:12342028-12342047 None:intergenic 40.0%
!! ACTTCAGACAGAAGTGCTAA+GGG - chr1_2:12342212-12342231 None:intergenic 40.0%
!! AACTTCAGACAGAAGTGCTA+AGG - chr1_2:12342213-12342232 None:intergenic 40.0%
GGTTTAAATTTACTGGGTGC+AGG + chr1_2:12342303-12342322 Msa0056690:intron 40.0%
AAATTTACTGGGTGCAGGTA+TGG + chr1_2:12342308-12342327 Msa0056690:intron 40.0%
! ACATGGTAACTTGCGTATGT+CGG - chr1_2:12342417-12342436 None:intergenic 40.0%
! GCAGTTTTGCTTCCTTTTCT+TGG - chr1_2:12342848-12342867 None:intergenic 40.0%
AATGACTACACACCATCACA+AGG - chr1_2:12343355-12343374 None:intergenic 40.0%
TAAAAAAAGAGGGCTGTGTC+AGG + chr1_2:12343461-12343480 Msa0056690:intron 40.0%
CTTGTTAAACTAAGTGGGGT+CGG - chr1_2:12343651-12343670 None:intergenic 40.0%
GTTTACCAGTTAGCTGCAAT+TGG + chr1_2:12343824-12343843 Msa0056690:intron 40.0%
!! AAAACTGGCTTGTAAGGTGA+GGG - chr1_2:12344033-12344052 None:intergenic 40.0%
!! CCTTACAAGCCAGTTTTGTA+CGG + chr1_2:12344036-12344055 Msa0056690:intron 40.0%
CTAACTGATCCGTACAAAAC+TGG - chr1_2:12344048-12344067 None:intergenic 40.0%
TTGAAATGCAGAGATGCTTG+TGG + chr1_2:12344112-12344131 Msa0056690:intron 40.0%
TGAAATGCAGAGATGCTTGT+GGG + chr1_2:12344113-12344132 Msa0056690:intron 40.0%
GTCTATACTCTGTTGTGTTG+TGG + chr1_2:12344135-12344154 Msa0056690:intron 40.0%
TTGAAATGCAGAGATGCTTG+TGG + chr1_2:12344112-12344131 Msa0056690:intron 40.0%
! TGTGGTTCTATACTCTGTTG+TGG + chr1_2:12344338-12344357 Msa0056690:intron 40.0%
! GTGGTTCTATACTCTGTTGT+GGG + chr1_2:12344339-12344358 Msa0056690:intron 40.0%
GGATTCAGCGTAGTTTACAT+TGG + chr1_2:12344388-12344407 Msa0056690:intron 40.0%
TTAAGCACTAGGTCCATGAA+TGG + chr1_2:12344518-12344537 Msa0056690:intron 40.0%
ACTAAGTGATCAGTGTGCAA+TGG - chr1_2:12345160-12345179 None:intergenic 40.0%
TTCTTACCTTGCCTTATGCT+AGG + chr1_2:12345284-12345303 Msa0056690:intron 40.0%
AACAAACCTAGCATAAGGCA+AGG - chr1_2:12345293-12345312 None:intergenic 40.0%
CTAGCAATAGCATTGCTCAA+AGG - chr1_2:12345827-12345846 None:intergenic 40.0%
CTTTGAGCAATGCTATTGCT+AGG + chr1_2:12345825-12345844 Msa0056690:intron 40.0%
CTAGATATCGTACTGTCTTG+AGG + chr1_2:12345873-12345892 Msa0056690:intron 40.0%
TCAGGTATTACCCCAACTAA+AGG - chr1_2:12345963-12345982 None:intergenic 40.0%
GTGCACAAACATGCTACATT+TGG + chr1_2:12346224-12346243 Msa0056690:intron 40.0%
TAGCCATCCATATAGTTCAC+CGG - chr1_2:12346283-12346302 None:intergenic 40.0%
! ATATATGCTTTGTGCTGGCA+AGG + chr1_2:12346427-12346446 Msa0056690:intron 40.0%
AAACTTGAAGAGCTTGGGAT+TGG + chr1_2:12346695-12346714 Msa0056690:CDS 40.0%
AATGTGCTTGCATACGTTGA+AGG - chr1_2:12346725-12346744 None:intergenic 40.0%
GTTATCTCTCCAGAATTTCG+TGG + chr1_2:12346960-12346979 Msa0056690:CDS 40.0%
GTTTGATTGATCATTGCCGT+GGG + chr1_2:12347524-12347543 Msa0056690:intron 40.0%
TAACAGGAGAAATGTTCCCA+CGG - chr1_2:12347543-12347562 None:intergenic 40.0%
CATTGCCGCATGTACAATAA+AGG - chr1_2:12347566-12347585 None:intergenic 40.0%
CAGATGACAAGGATTCAAAC+TGG - chr1_2:12347639-12347658 None:intergenic 40.0%
AAACAGTGAAGCAGATGACA+AGG - chr1_2:12347650-12347669 None:intergenic 40.0%
ATGAGCAGAAGAGATTTGTG+GGG - chr1_2:12347821-12347840 None:intergenic 40.0%
CATGAGCAGAAGAGATTTGT+GGG - chr1_2:12347822-12347841 None:intergenic 40.0%
TCATGAGCAGAAGAGATTTG+TGG - chr1_2:12347823-12347842 None:intergenic 40.0%
TCTTCTGCTCATGAGATACA+CGG + chr1_2:12347829-12347848 Msa0056690:intron 40.0%
CTACAATTTCACTGCTGACA+TGG + chr1_2:12348057-12348076 Msa0056690:CDS 40.0%
ATACATGGCAGAGATCAAGT+GGG - chr1_2:12348116-12348135 None:intergenic 40.0%
AATACATGGCAGAGATCAAG+TGG - chr1_2:12348117-12348136 None:intergenic 40.0%
ATGCAAAATCCTAGGAAAGC+AGG + chr1_2:12348158-12348177 Msa0056690:intron 40.0%
TTGGGAACATTGCATTCTCA+CGG + chr1_2:12348276-12348295 Msa0056690:intron 40.0%
!! AATATACAGCTTTAGGGGGA+GGG - chr1_2:12348470-12348489 None:intergenic 40.0%
!! AAATATACAGCTTTAGGGGG+AGG - chr1_2:12348471-12348490 None:intergenic 40.0%
AATAAAAACGTTACGGGGCA+GGG - chr1_2:12348573-12348592 None:intergenic 40.0%
AAATAAAAACGTTACGGGGC+AGG - chr1_2:12348574-12348593 None:intergenic 40.0%
!! CAGCTTGATAATGTTTCTGC+TGG + chr1_2:12348680-12348699 Msa0056690:intron 40.0%
TTTCTGCTGGAACAACCAAA+TGG + chr1_2:12348693-12348712 Msa0056690:CDS 40.0%
AAGAAGAGAGATTCCAAACC+TGG - chr1_2:12348790-12348809 None:intergenic 40.0%
!! TTGCTCAATGCTTGCCATTT+TGG + chr1_2:12348809-12348828 Msa0056690:intron 40.0%
!!! TGCTCAATGCTTGCCATTTT+GGG + chr1_2:12348810-12348829 Msa0056690:intron 40.0%
AACATAGAATCATGAGGGTG+TGG - chr1_2:12349126-12349145 None:intergenic 40.0%
ACTTGTTTCAGTTGTACGGA+AGG + chr1_2:12349508-12349527 Msa0056690:intron 40.0%
AAATGAAAAGCTCGTGCTAC+TGG - chr1_2:12349850-12349869 None:intergenic 40.0%
GTCTGGGTTTATGTTGAGAA+CGG + chr1_2:12350181-12350200 Msa0056690:intron 40.0%
! AACGATGAAGTGTTTCGCAA+GGG - chr1_2:12350474-12350493 None:intergenic 40.0%
! AACATATTATGGTGACGAGG+AGG + chr1_2:12350551-12350570 Msa0056690:CDS 40.0%
ATAGAGGAACCAAAAGTCCT+AGG + chr1_2:12350606-12350625 Msa0056690:CDS 40.0%
TATGTTCAACTCGGAGAAGA+CGG + chr1_2:12350778-12350797 Msa0056690:CDS 40.0%
ATGCTAGTAAGGCGTACATA+AGG - chr1_2:12350835-12350854 None:intergenic 40.0%
!! GTTGTCATTTGGTGTGGTTT+GGG - chr1_2:12350978-12350997 None:intergenic 40.0%
ATGCGGGCCCAAATTAAATT+AGG - chr1_2:12351066-12351085 None:intergenic 40.0%
GACATGTAAATGTCAGATGC+GGG - chr1_2:12351082-12351101 None:intergenic 40.0%
TAACGCAAGTGCTTCTTCAA+GGG - chr1_2:12351198-12351217 None:intergenic 40.0%
ACATGCGAAATCAACATGCA+AGG - chr1_2:12351268-12351287 None:intergenic 40.0%
! CATGTCAATTTTTGACAGCC+CGG + chr1_2:12351283-12351302 Msa0056690:intron 40.0%
TGTTGCCGCATCAATTAATG+AGG - chr1_2:12351500-12351519 None:intergenic 40.0%
TGACTACAGAACACAACACT+GGG - chr1_2:12351700-12351719 None:intergenic 40.0%
ATGACTACAGAACACAACAC+TGG - chr1_2:12351701-12351720 None:intergenic 40.0%
ATAGCTAACAACGTCCATTG+CGG - chr1_2:12351914-12351933 None:intergenic 40.0%
TGGACGTTGTTAGCTATGAA+AGG + chr1_2:12351917-12351936 Msa0056690:intron 40.0%
TTAAATCCTTCATTGCCACG+TGG + chr1_2:12352049-12352068 Msa0056690:intron 40.0%
TGGATGTGAAAGGAAATGGA+AGG + chr1_2:12352101-12352120 Msa0056690:intron 40.0%
GGATGTGAAAGGAAATGGAA+GGG + chr1_2:12352102-12352121 Msa0056690:intron 40.0%
TAGTCACAACTCACAAGTAG+TGG - chr1_2:12352206-12352225 None:intergenic 40.0%
GGAACATACCCAGTTAAAAC+TGG - chr1_2:12352274-12352293 None:intergenic 40.0%
TTTAAAGGGGGGAAAAGTCA+AGG - chr1_2:12352295-12352314 None:intergenic 40.0%
! GACTTTTCCCCCCTTTAAAT+TGG + chr1_2:12352296-12352315 Msa0056690:intron 40.0%
CTGGATACCAATTTAAAGGG+GGG - chr1_2:12352306-12352325 None:intergenic 40.0%
TTTCACTTGGCTTCATACTC+TGG - chr1_2:12352325-12352344 None:intergenic 40.0%
AAATTCAAGGGCCTATTCCA+AGG - chr1_2:12352351-12352370 None:intergenic 40.0%
GGCGATAATGTGAAAACTGT+TGG + chr1_2:12352377-12352396 Msa0056690:intron 40.0%
!!! CAAGCACTACTTGGTGTTTT+TGG - chr1_2:12352411-12352430 None:intergenic 40.0%
ATGTGGCAGACATCTGTTAA+AGG - chr1_2:12352659-12352678 None:intergenic 40.0%
TTTAACAGATGTCTGCCACA+TGG + chr1_2:12352658-12352677 Msa0056690:intron 40.0%
TTTGTTTGGAAGTCTGGAGA+AGG + chr1_2:12352914-12352933 Msa0056690:intron 40.0%
! CTTTGGAGGTTGGAAAATAG+AGG + chr1_2:12352951-12352970 Msa0056690:intron 40.0%
GGTTGGAAAATAGAGGGATA+TGG + chr1_2:12352958-12352977 Msa0056690:intron 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - chr1_2:12353110-12353129 None:intergenic 40.0%
!! TTTTTGAGCTCCCTCAAATG+AGG + chr1_2:12353129-12353148 Msa0056690:intron 40.0%
TAAAGGACATTGAAAGGGGA+GGG - chr1_2:12353192-12353211 None:intergenic 40.0%
ATAAAGGACATTGAAAGGGG+AGG - chr1_2:12353193-12353212 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - chr1_2:12353267-12353286 None:intergenic 40.0%
! AATCACATAGGAGCATGAAG+TGG + chr1_2:12353383-12353402 Msa0056690:intron 40.0%
!! TACACCAGTTTTAACGGGAA+CGG + chr1_2:12353948-12353967 Msa0056690:intron 40.0%
TTTCACTTGGCTTCATACTC+TGG - chr1_2:12352325-12352344 None:intergenic 40.0%
! AAATTCAAGGGCCTTTTCCA+AGG - chr1_2:12354038-12354057 None:intergenic 40.0%
GGCGATAATGTGAAAACTGT+TGG + chr1_2:12352377-12352396 Msa0056690:intron 40.0%
! AGCAAGCACTAGGTGTTTTT+GGG - chr1_2:12354097-12354116 None:intergenic 40.0%
! AAGCAAGCACTAGGTGTTTT+TGG - chr1_2:12354098-12354117 None:intergenic 40.0%
!! GTTGGTCTTTAGTTTAGCTC+TGG - chr1_2:12354259-12354278 None:intergenic 40.0%
AGGAACTTGACTAAATGGAG+GGG - chr1_2:12354334-12354353 None:intergenic 40.0%
TTTAACAGATGTCTGCCACA+CGG + chr1_2:12352658-12352677 Msa0056690:intron 40.0%
TGCTATGGCAGAGATATAAG+CGG - chr1_2:12354511-12354530 None:intergenic 40.0%
TGGTTGAGTACATCAACAAG+GGG - chr1_2:12354535-12354554 None:intergenic 40.0%
GATTTCATGGGAACATGAAG+TGG + chr1_2:12354703-12354722 Msa0056690:intron 40.0%
CCTTTCCCATCTATATTGTC+AGG - chr1_2:12355041-12355060 None:intergenic 40.0%
CCTGACAATATAGATGGGAA+AGG + chr1_2:12355038-12355057 Msa0056690:intron 40.0%
ATAGATGGGAAAGGAAATGG+AGG + chr1_2:12355047-12355066 Msa0056690:intron 40.0%
TAGATGGGAAAGGAAATGGA+GGG + chr1_2:12355048-12355067 Msa0056690:intron 40.0%
TAGTCACAACTCACAAGCAA+TGG - chr1_2:12355153-12355172 None:intergenic 40.0%
AATTAAAGGGAGGGAAGACA+AGG - chr1_2:12355242-12355261 None:intergenic 40.0%
TGTCTTCCCTCCCTTTAATT+TGG + chr1_2:12355242-12355261 Msa0056690:intron 40.0%
! AAGTTCAAGGGCCTTTTCAT+AGG - chr1_2:12355297-12355316 None:intergenic 40.0%
GGTGATAAAGTGAGAACTGT+TGG + chr1_2:12355323-12355342 Msa0056690:CDS 40.0%
!! TGCAACTTTAGTCTTGTCTG+GGG - chr1_2:12355354-12355373 None:intergenic 40.0%
!! CTGCAACTTTAGTCTTGTCT+GGG - chr1_2:12355355-12355374 None:intergenic 40.0%
!! TCTGCAACTTTAGTCTTGTC+TGG - chr1_2:12355356-12355375 None:intergenic 40.0%
CACACTCATGCTAATTATCC+AGG - chr1_2:12355403-12355422 None:intergenic 40.0%
GGTTGCATAATCTTCGAACT+TGG - chr1_2:12355460-12355479 None:intergenic 40.0%
AGTTCGAAGATTATGCAACC+AGG + chr1_2:12355460-12355479 Msa0056690:three_prime_UTR 40.0%
!! GTCGACTTTTGGTACAACAA+AGG - chr1_2:12355653-12355672 None:intergenic 40.0%
GCTCTGCTTATACGTTGGAT+TGG - chr1_2:12337233-12337252 None:intergenic 45.0%
!!! GAGGGTTTTTGGTGAGAAAG+AGG - chr1_2:12337296-12337315 None:intergenic 45.0%
AAGAGAAGGAGAAGGAGTTG+AGG - chr1_2:12337388-12337407 None:intergenic 45.0%
AGATTGCGAAGAGAAGGAGA+AGG - chr1_2:12337396-12337415 None:intergenic 45.0%
TCCTTCTCTTCGCAATCTCA+TGG + chr1_2:12337398-12337417 Msa0056690:CDS 45.0%
ACCATGAGATTGCGAAGAGA+AGG - chr1_2:12337402-12337421 None:intergenic 45.0%
TTAGTTACATTCACGTGCGG+AGG - chr1_2:12337570-12337589 None:intergenic 45.0%
AAAACGGTTACAGCGGTGAA+CGG - chr1_2:12337598-12337617 None:intergenic 45.0%
GGATAGGAAAACGGTTACAG+CGG - chr1_2:12337605-12337624 None:intergenic 45.0%
! CTCCGTTTAATGGTGTTGGA+AGG + chr1_2:12337706-12337725 Msa0056690:CDS 45.0%
TGCAGTTCGTGGTAAGGATA+AGG + chr1_2:12337794-12337813 Msa0056690:CDS 45.0%
TCTTTCTTCTTACTCCGCAC+CGG - chr1_2:12337957-12337976 None:intergenic 45.0%
GTGTTGTCAATTGCGGATAG+TGG + chr1_2:12338276-12338295 Msa0056690:intron 45.0%
ACGGTAGAACTACTGTGTAG+CGG - chr1_2:12338324-12338343 None:intergenic 45.0%
CAACTTTGGCCACAATGCTA+AGG - chr1_2:12338851-12338870 None:intergenic 45.0%
TAGCATTGTGGCCAAAGTTG+CGG + chr1_2:12338851-12338870 Msa0056690:intron 45.0%
! CCTTTTCCCTGTGAACTAGA+AGG - chr1_2:12338906-12338925 None:intergenic 45.0%
!! CCTTCTAGTTCACAGGGAAA+AGG + chr1_2:12338903-12338922 Msa0056690:intron 45.0%
CACAGGGAAAAGGAGTAATC+TGG + chr1_2:12338913-12338932 Msa0056690:intron 45.0%
! CGGATAGTTCTGCTTCTACA+AGG + chr1_2:12339040-12339059 Msa0056690:CDS 45.0%
!! AAACTCTTGCCAGGTTGATC+TGG + chr1_2:12339080-12339099 Msa0056690:CDS 45.0%
GAAGCCGCTAGGGAAATTTA+CGG + chr1_2:12339104-12339123 Msa0056690:CDS 45.0%
AAGCCGCTAGGGAAATTTAC+GGG + chr1_2:12339105-12339124 Msa0056690:CDS 45.0%
TTTCCCATGGGTGGATACAA+TGG - chr1_2:12339135-12339154 None:intergenic 45.0%
ACCATCACAGACTTTCCCAT+GGG - chr1_2:12339147-12339166 None:intergenic 45.0%
AACCATCACAGACTTTCCCA+TGG - chr1_2:12339148-12339167 None:intergenic 45.0%
GGTTGTGGAGTCTGTTACAA+AGG + chr1_2:12339164-12339183 Msa0056690:CDS 45.0%
GGAGTCTGTTACAAAGGCAA+AGG + chr1_2:12339170-12339189 Msa0056690:CDS 45.0%
AACTGCTTTGCAAACACCAC+GGG + chr1_2:12339770-12339789 Msa0056690:CDS 45.0%
TGGTTCATGCTTACCTTGCA+CGG + chr1_2:12339808-12339827 Msa0056690:CDS 45.0%
TTACCAAGTTGCCAATCAGC+AGG + chr1_2:12339885-12339904 Msa0056690:CDS 45.0%
CTCAGCAAGTCACACAATGA+AGG + chr1_2:12340247-12340266 Msa0056690:CDS 45.0%
GTCAAGTAGGGAAGTAGGAT+TGG - chr1_2:12340291-12340310 None:intergenic 45.0%
CAGCCATGGTTATGTCAAGT+AGG - chr1_2:12340304-12340323 None:intergenic 45.0%
CTTGCTCAGAAACTCTACGA+GGG + chr1_2:12340424-12340443 Msa0056690:CDS 45.0%
GAGGGAGTTGAACTGACTAA+TGG + chr1_2:12340442-12340461 Msa0056690:CDS 45.0%
!! AGAACTGATGGACTCCATGT+AGG + chr1_2:12340493-12340512 Msa0056690:intron 45.0%
ACTCCATGTAGGTATCCCTT+TGG + chr1_2:12340504-12340523 Msa0056690:intron 45.0%
CAACCAAAGGGATACCTACA+TGG - chr1_2:12340510-12340529 None:intergenic 45.0%
TTCGCTCCCTGATCATTGAA+AGG + chr1_2:12340931-12340950 Msa0056690:CDS 45.0%
GCACAGACATTCTTCGGATT+AGG - chr1_2:12341208-12341227 None:intergenic 45.0%
! CATTTTGCCAACAGACACGA+GGG + chr1_2:12341235-12341254 Msa0056690:intron 45.0%
TCAGGTAAGCCATACTTCCA+AGG - chr1_2:12341276-12341295 None:intergenic 45.0%
! TTCATTGGTGATTACAGGGC+CGG - chr1_2:12341581-12341600 None:intergenic 45.0%
CCACCAAAGTCGTAGTTCAT+TGG - chr1_2:12341596-12341615 None:intergenic 45.0%
CCAATGAACTACGACTTTGG+TGG + chr1_2:12341593-12341612 Msa0056690:intron 45.0%
TGCACAATTGTTGAGTGCAG+TGG + chr1_2:12341624-12341643 Msa0056690:intron 45.0%
AGTGCGATTTGTGACTGTGA+TGG - chr1_2:12341673-12341692 None:intergenic 45.0%
ATCACAGTCACAAATCGCAC+TGG + chr1_2:12341672-12341691 Msa0056690:intron 45.0%
CCGAAGATCACCAAGGTAAA+AGG - chr1_2:12341750-12341769 None:intergenic 45.0%
AAAGTTGCCGAAGATCACCA+AGG - chr1_2:12341757-12341776 None:intergenic 45.0%
!! TGTTGACTTGTCAGCAATGC+TGG + chr1_2:12342510-12342529 Msa0056690:intron 45.0%
GGAACAAGCTGTTCTTGAGA+AGG + chr1_2:12342603-12342622 Msa0056690:CDS 45.0%
AGGAAGCAAAACTGCAACCT+AGG + chr1_2:12342853-12342872 Msa0056690:intron 45.0%
TTAATGTCCGAAACCACCGT+TGG + chr1_2:12342921-12342940 Msa0056690:intron 45.0%
CATGGTGTATTTAGCGCCAA+CGG - chr1_2:12342940-12342959 None:intergenic 45.0%
ACCATGAACCGAACACGTAA+GGG + chr1_2:12342954-12342973 Msa0056690:intron 45.0%
AATAGCCACCCTTACGTGTT+CGG - chr1_2:12342965-12342984 None:intergenic 45.0%
!!! AGGTTTTGGCTTGCACAAAG+AGG - chr1_2:12343065-12343084 None:intergenic 45.0%
GGGTTGAGTTTCCTGGATAT+CGG + chr1_2:12343267-12343286 Msa0056690:CDS 45.0%
GGTTGAGTTTCCTGGATATC+GGG + chr1_2:12343268-12343287 Msa0056690:CDS 45.0%
TGGATATCGGGCAGTGTTTA+CGG + chr1_2:12343280-12343299 Msa0056690:CDS 45.0%
ATACTTATTCCTGCCAAGGC+CGG + chr1_2:12343425-12343444 Msa0056690:intron 45.0%
!!! CTCTTTTTTTACCCGGGCTT+GGG - chr1_2:12343452-12343471 None:intergenic 45.0%
CAAGCCCGGGTAAAAAAAGA+GGG + chr1_2:12343451-12343470 Msa0056690:intron 45.0%
!!! ACAGCCCTCTTTTTTTACCC+GGG - chr1_2:12343458-12343477 None:intergenic 45.0%
!!! CACAGCCCTCTTTTTTTACC+CGG - chr1_2:12343459-12343478 None:intergenic 45.0%
AGCTATACAGCGCATTGCTT+CGG - chr1_2:12343567-12343586 None:intergenic 45.0%
CGACCCCACTTAGTTTAACA+AGG + chr1_2:12343649-12343668 Msa0056690:intron 45.0%
GTTACCCAATTGCAGCTAAC+TGG - chr1_2:12343832-12343851 None:intergenic 45.0%
CGTGTGTGGAGGTAAATGAT+GGG - chr1_2:12343930-12343949 None:intergenic 45.0%
CCATCATTTACCTCCACACA+CGG + chr1_2:12343928-12343947 Msa0056690:intron 45.0%
CATCATTTACCTCCACACAC+GGG + chr1_2:12343929-12343948 Msa0056690:intron 45.0%
!! AAACTGGCTTGTAAGGTGAG+GGG - chr1_2:12344032-12344051 None:intergenic 45.0%
!! CAAAACTGGCTTGTAAGGTG+AGG - chr1_2:12344034-12344053 None:intergenic 45.0%
!! CCGTACAAAACTGGCTTGTA+AGG - chr1_2:12344039-12344058 None:intergenic 45.0%
!! GAGGCTGTGTAGGTTTTGTA+CGG + chr1_2:12344244-12344263 Msa0056690:intron 45.0%
AGCTTCAGTGACAATGTCCT+AGG - chr1_2:12344659-12344678 None:intergenic 45.0%
TAGGACATTGTCACTGAAGC+TGG + chr1_2:12344658-12344677 Msa0056690:intron 45.0%
GGGGACATAATTGCATGTCA+GGG + chr1_2:12345195-12345214 Msa0056690:intron 45.0%
TCAGGGATCAACTTTATCGG+AGG + chr1_2:12345212-12345231 Msa0056690:intron 45.0%
ATCAACTTTATCGGAGGCTC+AGG + chr1_2:12345218-12345237 Msa0056690:intron 45.0%
AGCTGAAATCAGTGCAGTCA+TGG - chr1_2:12345684-12345703 None:intergenic 45.0%
!! ATGACTGCACTGATTTCAGC+TGG + chr1_2:12345683-12345702 Msa0056690:intron 45.0%
TTCCCGGTGAACTATATGGA+TGG + chr1_2:12346277-12346296 Msa0056690:intron 45.0%
AGCCATCCATATAGTTCACC+GGG - chr1_2:12346282-12346301 None:intergenic 45.0%
TCCAGAATTTCGTGGTCGTA+TGG + chr1_2:12346968-12346987 Msa0056690:CDS 45.0%
ACCATACGACCACGAAATTC+TGG - chr1_2:12346972-12346991 None:intergenic 45.0%
! CGTATGGTAAGCTTTGGTCA+TGG + chr1_2:12346984-12347003 Msa0056690:intron 45.0%
TGGCCCATTTGTCATTAGTC+AGG + chr1_2:12347223-12347242 Msa0056690:intron 45.0%
GGGCCTGACTAATGACAAAT+GGG - chr1_2:12347229-12347248 None:intergenic 45.0%
TGGGCCTGACTAATGACAAA+TGG - chr1_2:12347230-12347249 None:intergenic 45.0%
TGTCATTAGTCAGGCCCATT+AGG + chr1_2:12347232-12347251 Msa0056690:intron 45.0%
CGTTTGATTGATCATTGCCG+TGG + chr1_2:12347523-12347542 Msa0056690:intron 45.0%
!! GGATTCAAACTGGCTTGACT+CGG - chr1_2:12347629-12347648 None:intergenic 45.0%
CTTCTGCTCATGAGATACAC+GGG + chr1_2:12347830-12347849 Msa0056690:intron 45.0%
TTCTGCTCATGAGATACACG+GGG + chr1_2:12347831-12347850 Msa0056690:intron 45.0%
TACATGGCAGAGATCAAGTG+GGG - chr1_2:12348115-12348134 None:intergenic 45.0%
AATCCTAGGAAAGCAGGCTT+TGG + chr1_2:12348164-12348183 Msa0056690:intron 45.0%
ATTCCAAAGCCTGCTTTCCT+AGG - chr1_2:12348170-12348189 None:intergenic 45.0%
TGCAATGTTCCCAACCTTCA+TGG - chr1_2:12348270-12348289 None:intergenic 45.0%
CTTTCTTCGAATATCGGTCC+CGG + chr1_2:12348423-12348442 Msa0056690:intron 45.0%
TTTCTTCGAATATCGGTCCC+GGG + chr1_2:12348424-12348443 Msa0056690:intron 45.0%
!! ATATACAGCTTTAGGGGGAG+GGG - chr1_2:12348469-12348488 None:intergenic 45.0%
! TGCTTACTGTCTGAGATAGG+TGG + chr1_2:12348601-12348620 Msa0056690:intron 45.0%
GCTGGAACAACCAAATGGAA+AGG + chr1_2:12348698-12348717 Msa0056690:CDS 45.0%
AAGGCCTCCTTGGAGATTAT+TGG + chr1_2:12348717-12348736 Msa0056690:CDS 45.0%
TCCTTGGAGATTATTGGACG+CGG + chr1_2:12348723-12348742 Msa0056690:CDS 45.0%
!!! GCTCAATGCTTGCCATTTTG+GGG + chr1_2:12348811-12348830 Msa0056690:intron 45.0%
! CGTGATTTGAGACCCCAAAA+TGG - chr1_2:12348826-12348845 None:intergenic 45.0%
TGTTAGTGACTCTGATAGCC+TGG + chr1_2:12348905-12348924 Msa0056690:intron 45.0%
! GACACGAACGACTCTTGTTT+GGG - chr1_2:12349043-12349062 None:intergenic 45.0%
! AACAGTATTTGCTGACCCTG+TGG + chr1_2:12349315-12349334 Msa0056690:intron 45.0%
TCAACATAAACCCAGACCAC+AGG - chr1_2:12350178-12350197 None:intergenic 45.0%
GACCTCTGGATTTCCTGTTA+AGG + chr1_2:12350208-12350227 Msa0056690:intron 45.0%
CTCCTTAACAGGAAATCCAG+AGG - chr1_2:12350213-12350232 None:intergenic 45.0%
! ACGATGAAGTGTTTCGCAAG+GGG - chr1_2:12350473-12350492 None:intergenic 45.0%
! CAACGATGAAGTGTTTCGCA+AGG - chr1_2:12350475-12350494 None:intergenic 45.0%
CTTGCGAAACACTTCATCGT+TGG + chr1_2:12350473-12350492 Msa0056690:intron 45.0%
! ATATTATGGTGACGAGGAGG+AGG + chr1_2:12350554-12350573 Msa0056690:CDS 45.0%
TAAAACATACGACAGGGCCA+AGG - chr1_2:12350658-12350677 None:intergenic 45.0%
!! GGCCCTGTCGTATGTTTTAA+TGG + chr1_2:12350659-12350678 Msa0056690:intron 45.0%
ATGTTCAACTCGGAGAAGAC+GGG + chr1_2:12350779-12350798 Msa0056690:CDS 45.0%
!! GGTTGTCATTTGGTGTGGTT+TGG - chr1_2:12350979-12350998 None:intergenic 45.0%
! CATTCGGTTGTCATTTGGTG+TGG - chr1_2:12350984-12351003 None:intergenic 45.0%
GTAACGCAAGTGCTTCTTCA+AGG - chr1_2:12351199-12351218 None:intergenic 45.0%
GAGAAACGTACCAATGTCAC+TGG - chr1_2:12351230-12351249 None:intergenic 45.0%
TTGATGCGGCAACACATCAT+TGG + chr1_2:12351506-12351525 Msa0056690:intron 45.0%
TGATGCGGCAACACATCATT+GGG + chr1_2:12351507-12351526 Msa0056690:intron 45.0%
GACTACAGAACACAACACTG+GGG - chr1_2:12351699-12351718 None:intergenic 45.0%
! ATGACAGGTTTTCCATCGTC+AGG - chr1_2:12351767-12351786 None:intergenic 45.0%
GACAATTGCTCCTGTTCCTA+AGG + chr1_2:12351829-12351848 Msa0056690:CDS 45.0%
GAAGCCAAGTGAAATCACCT+TGG + chr1_2:12352331-12352350 Msa0056690:intron 45.0%
CTCATCAAGCAAGCACTACT+TGG - chr1_2:12352420-12352439 None:intergenic 45.0%
!! ACAGTTTAGCTCTGACCCTA+CGG - chr1_2:12352556-12352575 None:intergenic 45.0%
!! TGAGGCTTTGTTTGGAAGTC+TGG + chr1_2:12352908-12352927 Msa0056690:intron 45.0%
! ATTGAAAGGGGAGGGTTTTG+GGG - chr1_2:12353184-12353203 None:intergenic 45.0%
! CATTGAAAGGGGAGGGTTTT+GGG - chr1_2:12353185-12353204 None:intergenic 45.0%
! ACATTGAAAGGGGAGGGTTT+TGG - chr1_2:12353186-12353205 None:intergenic 45.0%
!!! GAGGGTTTTGGAAACAAGGA+AGG - chr1_2:12353230-12353249 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr1_2:12353262-12353281 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr1_2:12353263-12353282 None:intergenic 45.0%
TGTGTAAGGGAGAGATGTAG+TGG + chr1_2:12353474-12353493 Msa0056690:intron 45.0%
GAGATGATGAAGAGAGACAG+TGG + chr1_2:12353568-12353587 Msa0056690:intron 45.0%
ATGATGAAGAGAGACAGTGG+TGG + chr1_2:12353571-12353590 Msa0056690:intron 45.0%
TTTCACAGATGTCAGCCACA+TGG - chr1_2:12353749-12353768 None:intergenic 45.0%
CCTTTCGCATCCATATAGTC+AGG - chr1_2:12353776-12353795 None:intergenic 45.0%
CCTGACTATATGGATGCGAA+AGG + chr1_2:12353773-12353792 Msa0056690:intron 45.0%
ATGGATGCGAAAGGAAATGG+AGG + chr1_2:12353782-12353801 Msa0056690:intron 45.0%
TGGATGCGAAAGGAAATGGA+GGG + chr1_2:12353783-12353802 Msa0056690:intron 45.0%
GGGTAGTCACAAACAAGTAG+TGG - chr1_2:12353890-12353909 None:intergenic 45.0%
!! ACACCAGTTTTAACGGGAAC+GGG + chr1_2:12353949-12353968 Msa0056690:intron 45.0%
GAAGCCAAGTGAAATCACCT+TGG + chr1_2:12352331-12352350 Msa0056690:intron 45.0%
GTGTGGCAGACATCTGTTAA+AGG - chr1_2:12354354-12354373 None:intergenic 45.0%
GAGACATAACAGTGATGCAG+TGG + chr1_2:12354734-12354753 Msa0056690:intron 45.0%
ACATAACAGTGATGCAGTGG+TGG + chr1_2:12354737-12354756 Msa0056690:intron 45.0%
CGTCGAGCAGTGAAATGAAA+TGG + chr1_2:12354765-12354784 Msa0056690:intron 45.0%
! ATGATGAAGAGTGGTGGAGA+TGG + chr1_2:12354870-12354889 Msa0056690:intron 45.0%
AGATGGGAAAGGAAATGGAG+GGG + chr1_2:12355049-12355068 Msa0056690:intron 45.0%
!! GCAACTTTAGTCTTGTCTGG+GGG - chr1_2:12355353-12355372 None:intergenic 45.0%
GAATCTTCCCTCACTCATCT+GGG - chr1_2:12355500-12355519 None:intergenic 45.0%
AGAATCTTCCCTCACTCATC+TGG - chr1_2:12355501-12355520 None:intergenic 45.0%
!! AAATTAATAACATTAATAAT+TGG + chr1_2:12339509-12339528 Msa0056690:intron 5.0%
!! TAAGTAATAAAATAAAAAAA+AGG + chr1_2:12342103-12342122 Msa0056690:intron 5.0%
!!! TTTTTAAAAAAAATTTTGTT+CGG + chr1_2:12342696-12342715 Msa0056690:intron 5.0%
AGGTGGAGAAGAAGTTGCGT+TGG - chr1_2:12337368-12337387 None:intergenic 50.0%
AGAAGGAGAAGGAGTTGAGG+TGG - chr1_2:12337385-12337404 None:intergenic 50.0%
AACTGCGGTGGCGAGATTAA+TGG - chr1_2:12337546-12337565 None:intergenic 50.0%
GGCTCTCCGTTTAATGGTGT+TGG + chr1_2:12337702-12337721 Msa0056690:CDS 50.0%
GTGAAAGCTGTTGCAGTTCG+TGG + chr1_2:12337783-12337802 Msa0056690:CDS 50.0%
AGCTGTTGCAGTTCGTGGTA+AGG + chr1_2:12337788-12337807 Msa0056690:CDS 50.0%
AGAAGAAGAAGAAGCCGGTG+CGG + chr1_2:12337940-12337959 Msa0056690:CDS 50.0%
TTCTCCGGCTGTAAGCGATT+CGG + chr1_2:12337989-12338008 Msa0056690:CDS 50.0%
!! TGTAAGCGATTCGGTGGAAG+TGG + chr1_2:12337998-12338017 Msa0056690:CDS 50.0%
!! ATGTGTCTAGGTGTCGGTGT+CGG - chr1_2:12338138-12338157 None:intergenic 50.0%
!! TACACGTGTCGGTGTTGCAT+TGG + chr1_2:12338221-12338240 Msa0056690:intron 50.0%
CGAGTGTCTCTGACACAAGT+CGG - chr1_2:12338250-12338269 None:intergenic 50.0%
GAAGGAGGTAAACTCTTGCC+AGG + chr1_2:12339071-12339090 Msa0056690:CDS 50.0%
TTGATCTGGAGAAGCCGCTA+GGG + chr1_2:12339094-12339113 Msa0056690:CDS 50.0%
ATCACAGACTTTCCCATGGG+TGG - chr1_2:12339144-12339163 None:intergenic 50.0%
ACCCATGGGAAAGTCTGTGA+TGG + chr1_2:12339143-12339162 Msa0056690:CDS 50.0%
GGGAAAGTCTGTGATGGTTG+TGG + chr1_2:12339149-12339168 Msa0056690:CDS 50.0%
AGAGACTTGGCTTCAAGGTC+TGG + chr1_2:12339249-12339268 Msa0056690:CDS 50.0%
!! ATGCGGCATTGATGCTCTTC+AGG - chr1_2:12339338-12339357 None:intergenic 50.0%
AGCATCAATGCCGCATTGAG+CGG + chr1_2:12339342-12339361 Msa0056690:CDS 50.0%
GAGAATGTACCCGCTCAATG+CGG - chr1_2:12339355-12339374 None:intergenic 50.0%
CACAGATAGCCAGGCAATAG+TGG - chr1_2:12339564-12339583 None:intergenic 50.0%
CACGATCAGGATCTGATGCA+AGG - chr1_2:12339635-12339654 None:intergenic 50.0%
TGCATCAGATCCTGATCGTG+AGG + chr1_2:12339635-12339654 Msa0056690:CDS 50.0%
GCATCAGATCCTGATCGTGA+GGG + chr1_2:12339636-12339655 Msa0056690:CDS 50.0%
TTCATGCTTACCTTGCACGG+AGG + chr1_2:12339811-12339830 Msa0056690:CDS 50.0%
TCATGCTTACCTTGCACGGA+GGG + chr1_2:12339812-12339831 Msa0056690:CDS 50.0%
! CTTCCTGCTGATTGGCAACT+TGG - chr1_2:12339891-12339910 None:intergenic 50.0%
TTCGGTTACTTCTGGTGAGG+AGG + chr1_2:12340088-12340107 Msa0056690:CDS 50.0%
TTACTTCTGGTGAGGAGGCA+AGG + chr1_2:12340093-12340112 Msa0056690:CDS 50.0%
TACTTCTGGTGAGGAGGCAA+GGG + chr1_2:12340094-12340113 Msa0056690:CDS 50.0%
GCTTGCTCAGAAACTCTACG+AGG + chr1_2:12340423-12340442 Msa0056690:intron 50.0%
! GATGACATGGTCGGCTTAAG+TGG - chr1_2:12340616-12340635 None:intergenic 50.0%
!! TACTAGTCGGTTCGCACATG+TGG + chr1_2:12340785-12340804 Msa0056690:intron 50.0%
TGTCTGTGTCCGTGCTTCAT+AGG - chr1_2:12341069-12341088 None:intergenic 50.0%
! TCTTCGGATTAGGTGTGTCC+CGG - chr1_2:12341198-12341217 None:intergenic 50.0%
! GCATTTTGCCAACAGACACG+AGG + chr1_2:12341234-12341253 Msa0056690:intron 50.0%
! GGCCGTGTTTTGTCAAACCT+TGG + chr1_2:12341256-12341275 Msa0056690:intron 50.0%
! GAGGGGAGTGGAAGTTTTTC+AGG - chr1_2:12341294-12341313 None:intergenic 50.0%
AATTACCCAGGCCCAAGCTA+GGG + chr1_2:12341320-12341339 Msa0056690:intron 50.0%
AGTGGTGAGCTGCAATTTGC+AGG + chr1_2:12341642-12341661 Msa0056690:intron 50.0%
AAAGGTTTACAGCAGTGCGG+TGG + chr1_2:12341901-12341920 Msa0056690:intron 50.0%
GGTCGGTCTAATGGCTTCAT+GGG - chr1_2:12342396-12342415 None:intergenic 50.0%
! GGTAACTTGCGTATGTCGGT+CGG - chr1_2:12342413-12342432 None:intergenic 50.0%
! ACTTGTCAGCAATGCTGGCT+GGG + chr1_2:12342515-12342534 Msa0056690:intron 50.0%
GGCGTGCTCTGTTACATGTT+TGG - chr1_2:12342891-12342910 None:intergenic 50.0%
TTTAGCGCCAACGGTGGTTT+CGG - chr1_2:12342931-12342950 None:intergenic 50.0%
CACCATGAACCGAACACGTA+AGG + chr1_2:12342953-12342972 Msa0056690:intron 50.0%
ACCCTTACGTGTTCGGTTCA+TGG - chr1_2:12342958-12342977 None:intergenic 50.0%
ATGAACCGAACACGTAAGGG+TGG + chr1_2:12342957-12342976 Msa0056690:intron 50.0%
GTAAACACTGCCCGATATCC+AGG - chr1_2:12343281-12343300 None:intergenic 50.0%
ATCGGGCAGTGTTTACGGTA+TGG + chr1_2:12343285-12343304 Msa0056690:intron 50.0%
!!! CCTCTTTTTTTACCCGGGCT+TGG - chr1_2:12343453-12343472 None:intergenic 50.0%
CCAAGCCCGGGTAAAAAAAG+AGG + chr1_2:12343450-12343469 Msa0056690:intron 50.0%
GCTATACAGCGCATTGCTTC+GGG - chr1_2:12343566-12343585 None:intergenic 50.0%
GCTGCAATTGGGTAACAAGC+TGG + chr1_2:12343836-12343855 Msa0056690:intron 50.0%
! GTGTGGAGGTAAATGATGGG+TGG - chr1_2:12343927-12343946 None:intergenic 50.0%
CCGTGTGTGGAGGTAAATGA+TGG - chr1_2:12343931-12343950 None:intergenic 50.0%
AGACTGGCACATGAATGGAG+AGG - chr1_2:12344802-12344821 None:intergenic 50.0%
TATTGCATGCGGAAGGCTAG+AGG - chr1_2:12345051-12345070 None:intergenic 50.0%
ATCCAAGCGGCTATTGCATG+CGG - chr1_2:12345062-12345081 None:intergenic 50.0%
GGGGGACATAATTGCATGTC+AGG + chr1_2:12345194-12345213 Msa0056690:intron 50.0%
!! AACGTGGTGGTGGTTGTGTA+TGG - chr1_2:12345572-12345591 None:intergenic 50.0%
AGTGATGCCTCAGAGTAACG+TGG - chr1_2:12345588-12345607 None:intergenic 50.0%
!! ACGTTACTCTGAGGCATCAC+TGG + chr1_2:12345587-12345606 Msa0056690:CDS 50.0%
CGACTTCCCGGTGAACTATA+TGG + chr1_2:12346273-12346292 Msa0056690:intron 50.0%
! TATGCTTTGTGCTGGCAAGG+AGG + chr1_2:12346581-12346600 Msa0056690:intron 50.0%
CGTGGTCGTATGGTAAGCTT+TGG + chr1_2:12346978-12346997 Msa0056690:intron 50.0%
AGGCTCATTGAAGAGGGAGA+GGG - chr1_2:12347785-12347804 None:intergenic 50.0%
AAGGCTCATTGAAGAGGGAG+AGG - chr1_2:12347786-12347805 None:intergenic 50.0%
CACTGCTGACATGGAAACTG+AGG + chr1_2:12348066-12348085 Msa0056690:CDS 50.0%
!! TATACAGCTTTAGGGGGAGG+GGG - chr1_2:12348468-12348487 None:intergenic 50.0%
ACCAAATGGAAAGGCCTCCT+TGG + chr1_2:12348707-12348726 Msa0056690:CDS 50.0%
TCCAAGGAGGCCTTTCCATT+TGG - chr1_2:12348711-12348730 None:intergenic 50.0%
GCGTCCAATAATCTCCAAGG+AGG - chr1_2:12348724-12348743 None:intergenic 50.0%
ACCGCGTCCAATAATCTCCA+AGG - chr1_2:12348727-12348746 None:intergenic 50.0%
GGACACGAACGACTCTTGTT+TGG - chr1_2:12349044-12349063 None:intergenic 50.0%
ACAAGAGTCGTTCGTGTCCA+AGG + chr1_2:12349045-12349064 Msa0056690:CDS 50.0%
TAGGCTGTGATCAACATCCG+AGG + chr1_2:12349575-12349594 Msa0056690:CDS 50.0%
TCGAGATCCTGTGTAGAGTC+AGG + chr1_2:12350014-12350033 Msa0056690:intron 50.0%
AGATCCTGTGTAGAGTCAGG+AGG + chr1_2:12350017-12350036 Msa0056690:intron 50.0%
GATCCTGTGTAGAGTCAGGA+GGG + chr1_2:12350018-12350037 Msa0056690:intron 50.0%
ATCCTGTGTAGAGTCAGGAG+GGG + chr1_2:12350019-12350038 Msa0056690:intron 50.0%
TTGAGAACGGTGAAGACCTC+TGG + chr1_2:12350194-12350213 Msa0056690:intron 50.0%
CTAGGCTCTCTGATTCCTAG+AGG - chr1_2:12350950-12350969 None:intergenic 50.0%
TAGGGTAAGCATCCTGACGA+TGG + chr1_2:12351752-12351771 Msa0056690:intron 50.0%
ATTGCGGTGGTTGCAAAGAC+TGG - chr1_2:12351898-12351917 None:intergenic 50.0%
AGTCTTTGCAACCACCGCAA+TGG + chr1_2:12351897-12351916 Msa0056690:intron 50.0%
TTTCATAGACGTCAGCCACG+TGG - chr1_2:12352067-12352086 None:intergenic 50.0%
ACGTGGCTGACGTCTATGAA+AGG + chr1_2:12352066-12352085 Msa0056690:intron 50.0%
ACAAAGGGCTGCTAGTGCTA+TGG - chr1_2:12352825-12352844 None:intergenic 50.0%
GTTTGGAAGTCTGGAGAAGG+AGG + chr1_2:12352917-12352936 Msa0056690:intron 50.0%
!! GTATTGGAGGAGGGTTTTGG+AGG - chr1_2:12353107-12353126 None:intergenic 50.0%
TTGAGCTCCCTCAAATGAGG+TGG + chr1_2:12353132-12353151 Msa0056690:intron 50.0%
!! TTGAAAGGGGAGGGTTTTGG+GGG - chr1_2:12353183-12353202 None:intergenic 50.0%
!!! AGGGGAGGGTTTTGGAAACA+AGG - chr1_2:12353234-12353253 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr1_2:12353264-12353283 None:intergenic 50.0%
!! CGGCGACTTAGGCTTTGTTT+GGG - chr1_2:12353274-12353293 None:intergenic 50.0%
CCAAACAAAGCCTAAGTCGC+CGG + chr1_2:12353272-12353291 Msa0056690:intron 50.0%
!! ACCTGTAATAGTGTCGGTGC+CGG - chr1_2:12353294-12353313 None:intergenic 50.0%
AGCATGAAGTGGCAGCACAT+AGG + chr1_2:12353394-12353413 Msa0056690:intron 50.0%
GCAGCACATAGGAGACACAA+CGG + chr1_2:12353405-12353424 Msa0056690:intron 50.0%
ACATAGGAGACACAACGGTG+AGG + chr1_2:12353410-12353429 Msa0056690:intron 50.0%
! CTCGCTGCCATTTCAATGCT+TGG - chr1_2:12353452-12353471 None:intergenic 50.0%
AATGGCAGCGAGACTGTGTA+AGG + chr1_2:12353460-12353479 Msa0056690:intron 50.0%
ATGGCAGCGAGACTGTGTAA+GGG + chr1_2:12353461-12353480 Msa0056690:intron 50.0%
! GGAGAGATGTAGTGGAGAGA+TGG + chr1_2:12353482-12353501 Msa0056690:intron 50.0%
GAGGAGAGACTGAGATGTCT+TGG + chr1_2:12353543-12353562 Msa0056690:intron 50.0%
GAGAGACTGAGATGTCTTGG+CGG + chr1_2:12353546-12353565 Msa0056690:intron 50.0%
GTGGAGACGATGAAGAGAGA+CGG + chr1_2:12353590-12353609 Msa0056690:intron 50.0%
TGTCAGCCACATGGCAATGA+AGG - chr1_2:12353740-12353759 None:intergenic 50.0%
GGATGCGAAAGGAAATGGAG+GGG + chr1_2:12353784-12353803 Msa0056690:intron 50.0%
!! CACCAGTTTTAACGGGAACG+GGG + chr1_2:12353950-12353969 Msa0056690:intron 50.0%
TACCCCGTTCCCGTTAAAAC+TGG - chr1_2:12353955-12353974 None:intergenic 50.0%
AGGCACATCAAGCAAGCACT+AGG - chr1_2:12354107-12354126 None:intergenic 50.0%
ACATCAACAAGGGGCTGCTA+TGG - chr1_2:12354526-12354545 None:intergenic 50.0%
GTTAGGAAGGTGATGTGGCT+GGG - chr1_2:12354560-12354579 None:intergenic 50.0%
TGTTAGGAAGGTGATGTGGC+TGG - chr1_2:12354561-12354580 None:intergenic 50.0%
AGGCTGTTAGGAAGGTGATG+TGG - chr1_2:12354565-12354584 None:intergenic 50.0%
GGAACATGAAGTGGCAACAC+AGG + chr1_2:12354712-12354731 Msa0056690:intron 50.0%
TGTCTCCCCACATCATCTCA+CGG - chr1_2:12354797-12354816 None:intergenic 50.0%
GATGATGTGGGGAGACAAAG+AGG + chr1_2:12354800-12354819 Msa0056690:intron 50.0%
GGAGTGACTGTGATATGTCG+TGG + chr1_2:12354821-12354840 Msa0056690:intron 50.0%
GTGACTGTGATATGTCGTGG+CGG + chr1_2:12354824-12354843 Msa0056690:intron 50.0%
! GTGGTGGAGATGATGAAGAG+TGG + chr1_2:12354861-12354880 Msa0056690:intron 50.0%
GTGGAGATGATGAAGAGTGG+TGG + chr1_2:12354864-12354883 Msa0056690:intron 50.0%
TGTCAGCGACATGGCAATGA+AGG - chr1_2:12355005-12355024 None:intergenic 50.0%
TTTCACGGATGTCAGCGACA+TGG - chr1_2:12355014-12355033 None:intergenic 50.0%
AACTCAGTCCCAGATGAGTG+AGG + chr1_2:12355489-12355508 Msa0056690:three_prime_UTR 50.0%
ACTCAGTCCCAGATGAGTGA+GGG + chr1_2:12355490-12355509 Msa0056690:three_prime_UTR 50.0%
TTCACGTGCGGAGGTAACTG+CGG - chr1_2:12337561-12337580 None:intergenic 55.0%
TCCACCGAATCGCTTACAGC+CGG - chr1_2:12337996-12338015 None:intergenic 55.0%
!! AGCGATTCGGTGGAAGTGGT+TGG + chr1_2:12338002-12338021 Msa0056690:CDS 55.0%
GACACCGACACCTAGACACA+TGG + chr1_2:12338137-12338156 Msa0056690:intron 55.0%
CAAGCATGTGGCCGCAACTT+TGG - chr1_2:12338865-12338884 None:intergenic 55.0%
GTTGATCTGGAGAAGCCGCT+AGG + chr1_2:12339093-12339112 Msa0056690:CDS 55.0%
AGGTGAGTCCAGGCAGATGA+GGG - chr1_2:12339318-12339337 None:intergenic 55.0%
GATGCTCTTCAGGTGAGTCC+AGG - chr1_2:12339328-12339347 None:intergenic 55.0%
GCATCAATGCCGCATTGAGC+GGG + chr1_2:12339343-12339362 Msa0056690:CDS 55.0%
AGATCCTGATCGTGAGGGAG+AGG + chr1_2:12339641-12339660 Msa0056690:CDS 55.0%
ATAGCCTCTCCCTCACGATC+AGG - chr1_2:12339648-12339667 None:intergenic 55.0%
!! AGTCGGTTCGCACATGTGGA+TGG + chr1_2:12340789-12340808 Msa0056690:intron 55.0%
TGAAGCACGGACACAGACAC+CGG + chr1_2:12341070-12341089 Msa0056690:intron 55.0%
ACACAACACGTGTCCGACAC+CGG + chr1_2:12341176-12341195 Msa0056690:intron 55.0%
GATTAGGTGTGTCCCGGTGT+CGG - chr1_2:12341192-12341211 None:intergenic 55.0%
GTAATTGTCAGCGAGGGGAG+TGG - chr1_2:12341306-12341325 None:intergenic 55.0%
CCTGGGTAATTGTCAGCGAG+GGG - chr1_2:12341311-12341330 None:intergenic 55.0%
GCCTGGGTAATTGTCAGCGA+GGG - chr1_2:12341312-12341331 None:intergenic 55.0%
CAATTACCCAGGCCCAAGCT+AGG + chr1_2:12341319-12341338 Msa0056690:intron 55.0%
TAAAGCCCTAGCTTGGGCCT+GGG - chr1_2:12341328-12341347 None:intergenic 55.0%
GAGGCCTAAAGCCCTAGCTT+GGG - chr1_2:12341334-12341353 None:intergenic 55.0%
TGAGGCCTAAAGCCCTAGCT+TGG - chr1_2:12341335-12341354 None:intergenic 55.0%
GGCCTCTAAACATGTTGGGC+CGG + chr1_2:12341559-12341578 Msa0056690:intron 55.0%
TAGCAGTTGCGAGTAGCGAC+AGG - chr1_2:12341704-12341723 None:intergenic 55.0%
CGCTACTCGCAACTGCTACA+CGG + chr1_2:12341706-12341725 Msa0056690:intron 55.0%
GCTACTCGCAACTGCTACAC+GGG + chr1_2:12341707-12341726 Msa0056690:intron 55.0%
GTTTACAGCAGTGCGGTGGT+GGG + chr1_2:12341905-12341924 Msa0056690:intron 55.0%
CGGTCGGTCTAATGGCTTCA+TGG - chr1_2:12342397-12342416 None:intergenic 55.0%
GCGTATGTCGGTCGGTCTAA+TGG - chr1_2:12342405-12342424 None:intergenic 55.0%
GACTTGTCAGCAATGCTGGC+TGG + chr1_2:12342514-12342533 Msa0056690:intron 55.0%
! CTTGTCAGCAATGCTGGCTG+GGG + chr1_2:12342516-12342535 Msa0056690:intron 55.0%
GGTGTATTTAGCGCCAACGG+TGG - chr1_2:12342937-12342956 None:intergenic 55.0%
TGTTACGGTCTGCTAGCTCG+AGG + chr1_2:12343246-12343265 Msa0056690:CDS 55.0%
GTTACGGTCTGCTAGCTCGA+GGG + chr1_2:12343247-12343266 Msa0056690:CDS 55.0%
AGCTCGAGGGTTGAGTTTCC+TGG + chr1_2:12343260-12343279 Msa0056690:CDS 55.0%
! TTTTTACCCGGGCTTGGGAC+CGG - chr1_2:12343447-12343466 None:intergenic 55.0%
GGACGAGACAGAGACAGTGA+CGG + chr1_2:12344679-12344698 Msa0056690:CDS 55.0%
CGCACAGACTGGCACATGAA+TGG - chr1_2:12344807-12344826 None:intergenic 55.0%
CAAAGGGACAACGCACAGAC+TGG - chr1_2:12344818-12344837 None:intergenic 55.0%
AAGCGGCTATTGCATGCGGA+AGG - chr1_2:12345058-12345077 None:intergenic 55.0%
TTCCGCATGCAATAGCCGCT+TGG + chr1_2:12345057-12345076 Msa0056690:intron 55.0%
ACCACCACCACGTTACTCTG+AGG + chr1_2:12345578-12345597 Msa0056690:CDS 55.0%
GATGCCTCAGAGTAACGTGG+TGG - chr1_2:12345585-12345604 None:intergenic 55.0%
TGTGCACAAGCTGACAGCAC+AGG - chr1_2:12346211-12346230 None:intergenic 55.0%
TGGCAGAGATCAAGTGGGGA+GGG - chr1_2:12348111-12348130 None:intergenic 55.0%
ATGGCAGAGATCAAGTGGGG+AGG - chr1_2:12348112-12348131 None:intergenic 55.0%
AAAACGTTACGGGGCAGGGA+AGG - chr1_2:12348569-12348588 None:intergenic 55.0%
TGGGCAGAAGTAGCTACTGC+AGG - chr1_2:12350120-12350139 None:intergenic 55.0%
TCAACTCGGAGAAGACGGGA+AGG + chr1_2:12350783-12350802 Msa0056690:CDS 55.0%
! GGTGTGGTTTGGGAGAGACT+AGG - chr1_2:12350968-12350987 None:intergenic 55.0%
CGCAAGTGCTTCTTCAAGGG+TGG - chr1_2:12351195-12351214 None:intergenic 55.0%
CGGTGGTTGCAAAGACTGGA+AGG - chr1_2:12351894-12351913 None:intergenic 55.0%
GCTAACAACGTCCATTGCGG+TGG - chr1_2:12351911-12351930 None:intergenic 55.0%
TGCTAGTGCTATGGCAGCTG+GGG - chr1_2:12352816-12352835 None:intergenic 55.0%
CTGCTAGTGCTATGGCAGCT+GGG - chr1_2:12352817-12352836 None:intergenic 55.0%
! TTAGGGTGGTGATGCAGCTG+GGG - chr1_2:12352869-12352888 None:intergenic 55.0%
! GTTAGGGTGGTGATGCAGCT+GGG - chr1_2:12352870-12352889 None:intergenic 55.0%
! TGTTAGGGTGGTGATGCAGC+TGG - chr1_2:12352871-12352890 None:intergenic 55.0%
!! GACGCAGTGGTGGGTTGTTA+GGG - chr1_2:12352886-12352905 None:intergenic 55.0%
!! TGCGTCGCTGAGGCTTTGTT+TGG + chr1_2:12352900-12352919 Msa0056690:intron 55.0%
AAGTCTGGAGAAGGAGGCGA+GGG + chr1_2:12352923-12352942 Msa0056690:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - chr1_2:12353257-12353276 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr1_2:12353258-12353277 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr1_2:12353259-12353278 None:intergenic 55.0%
!! CCGGCGACTTAGGCTTTGTT+TGG - chr1_2:12353275-12353294 None:intergenic 55.0%
GACGATGAAGAGAGACGGAG+TGG + chr1_2:12353595-12353614 Msa0056690:intron 55.0%
GATGAAGAGAGACGGAGTGG+CGG + chr1_2:12353598-12353617 Msa0056690:intron 55.0%
GCGGAGATGGCGAGACAATA+AGG + chr1_2:12353617-12353636 Msa0056690:intron 55.0%
GAAGGTGATGTGGCTGGGAA+TGG - chr1_2:12354555-12354574 None:intergenic 55.0%
GCAGAGGTAGGCTGTTAGGA+AGG - chr1_2:12354573-12354592 None:intergenic 55.0%
CAACTTAGCGACGCAGAGGT+AGG - chr1_2:12354585-12354604 None:intergenic 55.0%
CCTCTGCGTCGCTAAGTTGT+CGG + chr1_2:12354586-12354605 Msa0056690:intron 55.0%
!! GTCGGTGCCGACACTATTAC+AGG + chr1_2:12354604-12354623 Msa0056690:intron 55.0%
CAGCGACCGTGAGATGATGT+GGG + chr1_2:12354788-12354807 Msa0056690:intron 55.0%
AGCGACCGTGAGATGATGTG+GGG + chr1_2:12354789-12354808 Msa0056690:intron 55.0%
GGAGATGAAGAGACGAGTGG+TGG + chr1_2:12354845-12354864 Msa0056690:intron 55.0%
GTGGAGATGGCGAGAGGATA+AGG + chr1_2:12354883-12354902 Msa0056690:intron 55.0%
TGGGACTGAGTTGCAACTCC+TGG - chr1_2:12355481-12355500 None:intergenic 55.0%
TCCCTTCTCGTCGACAGCGA+CGG + chr1_2:12337734-12337753 Msa0056690:CDS 60.0%
TCCGTCGCTGTCGACGAGAA+GGG - chr1_2:12337738-12337757 None:intergenic 60.0%
! TCCGGCTGTAAGCGATTCGG+TGG + chr1_2:12337992-12338011 Msa0056690:CDS 60.0%
GCGGCTTCTCCAGATCAACC+TGG - chr1_2:12339092-12339111 None:intergenic 60.0%
GGGAAGTTCCCTCATCTGCC+TGG + chr1_2:12339307-12339326 Msa0056690:CDS 60.0%
CAGGTGAGTCCAGGCAGATG+AGG - chr1_2:12339319-12339338 None:intergenic 60.0%
GTGAGGGAGAGGCTATCGCT+TGG + chr1_2:12339652-12339671 Msa0056690:CDS 60.0%
AATCAAGGGCCCTCCGTGCA+AGG - chr1_2:12339824-12339843 None:intergenic 60.0%
CACAGACACCGGACACGACA+CGG + chr1_2:12341081-12341100 Msa0056690:intron 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG - chr1_2:12341092-12341111 None:intergenic 60.0%
CACAACACGTGTCCGACACC+GGG + chr1_2:12341177-12341196 Msa0056690:intron 60.0%
AACACGGCCCTCGTGTCTGT+TGG - chr1_2:12341245-12341264 None:intergenic 60.0%
CCCCTCGCTGACAATTACCC+AGG + chr1_2:12341308-12341327 Msa0056690:intron 60.0%
GGCCTGGGTAATTGTCAGCG+AGG - chr1_2:12341313-12341332 None:intergenic 60.0%
CTAAAGCCCTAGCTTGGGCC+TGG - chr1_2:12341329-12341348 None:intergenic 60.0%
CAGGCCCAAGCTAGGGCTTT+AGG + chr1_2:12341327-12341346 Msa0056690:intron 60.0%
GGCCGGCCCAACATGTTTAG+AGG - chr1_2:12341564-12341583 None:intergenic 60.0%
GGTTTACAGCAGTGCGGTGG+TGG + chr1_2:12341904-12341923 Msa0056690:intron 60.0%
ACTAAGTGGGGTCGGCCACA+TGG - chr1_2:12343643-12343662 None:intergenic 60.0%
TACCTCCACACACGGGCATG+AGG + chr1_2:12343936-12343955 Msa0056690:intron 60.0%
ACCTCCACACACGGGCATGA+GGG + chr1_2:12343937-12343956 Msa0056690:intron 60.0%
! ACGGGCATGAGGGGGTGTAT+TGG + chr1_2:12343947-12343966 Msa0056690:intron 60.0%
GCCTCAGAGTAACGTGGTGG+TGG - chr1_2:12345582-12345601 None:intergenic 60.0%
GGCAGAGATCAAGTGGGGAG+GGG - chr1_2:12348110-12348129 None:intergenic 60.0%
AGCCCCTCCTGACTCTACAC+AGG - chr1_2:12350024-12350043 None:intergenic 60.0%
!! CGATGAGGGTATCTCGCCTG+TGG + chr1_2:12350159-12350178 Msa0056690:intron 60.0%
! AGGGTATCTCGCCTGTGGTC+TGG + chr1_2:12350164-12350183 Msa0056690:intron 60.0%
GGGTATCTCGCCTGTGGTCT+GGG + chr1_2:12350165-12350184 Msa0056690:intron 60.0%
CGTCAGCCACGTGGCAATGA+AGG - chr1_2:12352058-12352077 None:intergenic 60.0%
TGCTATGGCAGCTGGGGAAG+CGG - chr1_2:12352810-12352829 None:intergenic 60.0%
GCTGCTAGTGCTATGGCAGC+TGG - chr1_2:12352818-12352837 None:intergenic 60.0%
!! GCAGTGGTGGGTTGTTAGGG+TGG - chr1_2:12352883-12352902 None:intergenic 60.0%
!! CGACGCAGTGGTGGGTTGTT+AGG - chr1_2:12352887-12352906 None:intergenic 60.0%
ACAAAGCCTCAGCGACGCAG+TGG - chr1_2:12352899-12352918 None:intergenic 60.0%
GAAGTCTGGAGAAGGAGGCG+AGG + chr1_2:12352922-12352941 Msa0056690:intron 60.0%
AGTCTGGAGAAGGAGGCGAG+GGG + chr1_2:12352924-12352943 Msa0056690:intron 60.0%
!! GCCGGCACCGACACTATTAC+AGG + chr1_2:12353290-12353309 Msa0056690:intron 60.0%
GAGACACAACGGTGAGGCAG+TGG + chr1_2:12353416-12353435 Msa0056690:intron 60.0%
ACACAACGGTGAGGCAGTGG+TGG + chr1_2:12353419-12353438 Msa0056690:intron 60.0%
GGAGAGATGGTGAGATCCCG+TGG + chr1_2:12353495-12353514 Msa0056690:intron 60.0%
GAGATGGTGAGATCCCGTGG+CGG + chr1_2:12353498-12353517 Msa0056690:intron 60.0%
CGACGCAGAGGTAGGCTGTT+AGG - chr1_2:12354577-12354596 None:intergenic 60.0%
CCGACAACTTAGCGACGCAG+AGG - chr1_2:12354589-12354608 None:intergenic 60.0%
GCAGCGACCGTGAGATGATG+TGG + chr1_2:12354787-12354806 Msa0056690:intron 60.0%
GGCGGAGATGAAGAGACGAG+TGG + chr1_2:12354842-12354861 Msa0056690:intron 60.0%
! AGAGTGGTGGAGATGGCGAG+AGG + chr1_2:12354877-12354896 Msa0056690:intron 60.0%
ACGTGCGGAGGTAACTGCGG+TGG - chr1_2:12337558-12337577 None:intergenic 65.0%
CTCCGTCGCTGTCGACGAGA+AGG - chr1_2:12337739-12337758 None:intergenic 65.0%
CCTCCACACACGGGCATGAG+GGG + chr1_2:12343938-12343957 Msa0056690:intron 65.0%
CTCCACACACGGGCATGAGG+GGG + chr1_2:12343939-12343958 Msa0056690:intron 65.0%
ACGTTACGGGGCAGGGAAGG+AGG - chr1_2:12348566-12348585 None:intergenic 65.0%
GTAGAGTCAGGAGGGGCTGC+AGG + chr1_2:12350026-12350045 Msa0056690:intron 65.0%
! GGTGGTGATGCAGCTGGGGA+TGG - chr1_2:12352865-12352884 None:intergenic 65.0%
AACCCACCACTGCGTCGCTG+AGG + chr1_2:12352890-12352909 Msa0056690:intron 65.0%
AGCCTCAGCGACGCAGTGGT+GGG - chr1_2:12352895-12352914 None:intergenic 65.0%
AAGCCTCAGCGACGCAGTGG+TGG - chr1_2:12352896-12352915 None:intergenic 65.0%
TGGAGAAGGAGGCGAGGGGA+GGG + chr1_2:12352928-12352947 Msa0056690:intron 65.0%
!! GAGGGGAGGGCTTTGGAGGT+TGG + chr1_2:12352941-12352960 Msa0056690:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG - chr1_2:12353252-12353271 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG - chr1_2:12353253-12353272 None:intergenic 65.0%
!! AGTGTCGGTGCCGGCGACTT+AGG - chr1_2:12353285-12353304 None:intergenic 65.0%
! GAGATCCCGTGGCGGAGAGA+CGG + chr1_2:12353506-12353525 Msa0056690:intron 65.0%
GACGGCGTGGGGAGACAAAG+AGG + chr1_2:12353524-12353543 Msa0056690:intron 65.0%
! GAGAGACGGAGTGGCGGAGA+TGG + chr1_2:12353604-12353623 Msa0056690:intron 65.0%
CCCCTCATGCCCGTGTGTGG+AGG - chr1_2:12343941-12343960 None:intergenic 70.0%
CACCCCCTCATGCCCGTGTG+TGG - chr1_2:12343944-12343963 None:intergenic 70.0%
CTGGAGAAGGAGGCGAGGGG+AGG + chr1_2:12352927-12352946 Msa0056690:intron 70.0%
AGGAGGCGAGGGGAGGGCTT+TGG + chr1_2:12352934-12352953 Msa0056690:intron 70.0%
! AGGCGAGGGGAGGGCTTTGG+AGG + chr1_2:12352937-12352956 Msa0056690:intron 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG - chr1_2:12353242-12353261 None:intergenic 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG - chr1_2:12353248-12353267 None:intergenic 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG - chr1_2:12353249-12353268 None:intergenic 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG - chr1_2:12353254-12353273 None:intergenic 70.0%
GGCTTGGGACCGGCCTTGGC+AGG - chr1_2:12343437-12343456 None:intergenic 75.0%
GCCAAGGCCGGTCCCAAGCC+CGG + chr1_2:12343437-12343456 Msa0056690:intron 75.0%
CCAAGGCCGGTCCCAAGCCC+GGG + chr1_2:12343438-12343457 Msa0056690:intron 75.0%
CCACGCCGTCTCTCCGCCAC+GGG - chr1_2:12353514-12353533 None:intergenic 75.0%
CCCACGCCGTCTCTCCGCCA+CGG - chr1_2:12353515-12353534 None:intergenic 75.0%
! CCGTGGCGGAGAGACGGCGT+GGG + chr1_2:12353512-12353531 Msa0056690:intron 75.0%
! CGTGGCGGAGAGACGGCGTG+GGG + chr1_2:12353513-12353532 Msa0056690:intron 75.0%
! CCCGGGCTTGGGACCGGCCT+TGG - chr1_2:12343441-12343460 None:intergenic 80.0%
!! CCCGTGGCGGAGAGACGGCG+TGG + chr1_2:12353511-12353530 Msa0056690:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 12337183 12355817 12337183 ID=Msa0056690;Name=Msa0056690
chr1_2 mRNA 12337183 12355817 12337183 ID=Msa0056690-mRNA-1;Parent=Msa0056690;Name=Msa0056690-mRNA-1;_AED=0.10;_eAED=0.10;_QI=171|0.87|0.8|1|0.95|1|25|429|1052
chr1_2 exon 12337183 12337419 12337183 ID=Msa0056690-mRNA-1:exon:4783;Parent=Msa0056690-mRNA-1
chr1_2 exon 12337519 12337685 12337519 ID=Msa0056690-mRNA-1:exon:4784;Parent=Msa0056690-mRNA-1
chr1_2 exon 12337698 12337920 12337698 ID=Msa0056690-mRNA-1:exon:4785;Parent=Msa0056690-mRNA-1
chr1_2 exon 12337936 12338079 12337936 ID=Msa0056690-mRNA-1:exon:4786;Parent=Msa0056690-mRNA-1
chr1_2 exon 12339006 12339191 12339006 ID=Msa0056690-mRNA-1:exon:4787;Parent=Msa0056690-mRNA-1
chr1_2 exon 12339201 12339364 12339201 ID=Msa0056690-mRNA-1:exon:4788;Parent=Msa0056690-mRNA-1
chr1_2 exon 12339617 12340268 12339617 ID=Msa0056690-mRNA-1:exon:4789;Parent=Msa0056690-mRNA-1
chr1_2 exon 12340424 12340510 12340424 ID=Msa0056690-mRNA-1:exon:4790;Parent=Msa0056690-mRNA-1
chr1_2 exon 12340906 12340952 12340906 ID=Msa0056690-mRNA-1:exon:4791;Parent=Msa0056690-mRNA-1
chr1_2 exon 12342325 12342434 12342325 ID=Msa0056690-mRNA-1:exon:4792;Parent=Msa0056690-mRNA-1
chr1_2 exon 12342524 12342624 12342524 ID=Msa0056690-mRNA-1:exon:4793;Parent=Msa0056690-mRNA-1
chr1_2 exon 12343209 12343301 12343209 ID=Msa0056690-mRNA-1:exon:4794;Parent=Msa0056690-mRNA-1
chr1_2 exon 12344661 12344744 12344661 ID=Msa0056690-mRNA-1:exon:4795;Parent=Msa0056690-mRNA-1
chr1_2 exon 12345525 12345608 12345525 ID=Msa0056690-mRNA-1:exon:4796;Parent=Msa0056690-mRNA-1
chr1_2 exon 12346689 12346757 12346689 ID=Msa0056690-mRNA-1:exon:4797;Parent=Msa0056690-mRNA-1
chr1_2 exon 12346930 12346989 12346930 ID=Msa0056690-mRNA-1:exon:4798;Parent=Msa0056690-mRNA-1
chr1_2 exon 12348016 12348087 12348016 ID=Msa0056690-mRNA-1:exon:4799;Parent=Msa0056690-mRNA-1
chr1_2 exon 12348683 12348790 12348683 ID=Msa0056690-mRNA-1:exon:4800;Parent=Msa0056690-mRNA-1
chr1_2 exon 12348990 12349066 12348990 ID=Msa0056690-mRNA-1:exon:4801;Parent=Msa0056690-mRNA-1
chr1_2 exon 12349519 12349602 12349519 ID=Msa0056690-mRNA-1:exon:4802;Parent=Msa0056690-mRNA-1
chr1_2 exon 12350539 12350650 12350539 ID=Msa0056690-mRNA-1:exon:4803;Parent=Msa0056690-mRNA-1
chr1_2 exon 12350748 12350837 12350748 ID=Msa0056690-mRNA-1:exon:4804;Parent=Msa0056690-mRNA-1
chr1_2 exon 12351173 12351238 12351173 ID=Msa0056690-mRNA-1:exon:4805;Parent=Msa0056690-mRNA-1
chr1_2 exon 12351755 12351850 12351755 ID=Msa0056690-mRNA-1:exon:4806;Parent=Msa0056690-mRNA-1
chr1_2 exon 12355272 12355817 12355272 ID=Msa0056690-mRNA-1:exon:4807;Parent=Msa0056690-mRNA-1
chr1_2 five_prime_UTR 12337183 12337353 12337183 ID=Msa0056690-mRNA-1:five_prime_utr;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12337354 12337419 12337354 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12337519 12337685 12337519 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12337698 12337920 12337698 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12337936 12338079 12337936 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12339006 12339191 12339006 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12339201 12339364 12339201 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12339617 12340268 12339617 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12340424 12340510 12340424 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12340906 12340952 12340906 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12342325 12342434 12342325 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12342524 12342624 12342524 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12343209 12343301 12343209 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12344661 12344744 12344661 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12345525 12345608 12345525 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12346689 12346757 12346689 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12346930 12346989 12346930 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12348016 12348087 12348016 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12348683 12348790 12348683 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12348990 12349066 12348990 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12349519 12349602 12349519 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12350539 12350650 12350539 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12350748 12350837 12350748 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12351173 12351238 12351173 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12351755 12351850 12351755 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 CDS 12355272 12355388 12355272 ID=Msa0056690-mRNA-1:cds;Parent=Msa0056690-mRNA-1
chr1_2 three_prime_UTR 12355389 12355817 12355389 ID=Msa0056690-mRNA-1:three_prime_utr;Parent=Msa0056690-mRNA-1
Gene Sequence

>Msa0056690

ATGATTCAATTCCAACGCAACTTCTTCTCCACCTCAACTCCTTCTCCTTCTCTTCGCAATCTCATGTTTCAACTCAGATCATTTCACAATCCATTAATCTCGCCACCGCAGTTACCTCCGCACGTGAATGTAACTAACATCGCCGTTCACCGCTGTAACCGTTTTCCTATCCGTTCATTCAGCGTTATCAACAATGTAACTAACTTCACGAATTTGAAATCCGTTAACGTTACTTTTGGCTCTCCGTTTAATGGTGTTGGAAGGAGTTCTCCCTTCTCGTCGACAGCGACGGAGAAGAAGAATAAACGGAAGAAAACGGTGAAAGCTGTTGCAGTTCGTGGTAAGGATAAGGATGTGAAATCTAGTGAACCTGTGGTTAAAGATGATGTTAAGAATGTGGATTTAGGGAAAACTGATTTGAGTGAAGAGATTAAGAGTGATGAAAAGGATTTGAAAAAGAAGAAGAAGAAGAAGCCGGTGCGGAGTAAGAAGAAAGATGATGTTAAGATTTCTCCGGCTGTAAGCGATTCGGTGGAAGTGGTTGGTAAAGTAGAAGTTTCGAAAAAACCGTCTTCAAAAGGGAAGAAGACTAATTCAAAGGAGAGTTTGTCCGTTACCACTTCAAAAGAAACTACGGATAGTTCTGCTTCTACAAGGTCGAAAAAGAAGGAGGTAAACTCTTGCCAGGTTGATCTGGAGAAGCCGCTAGGGAAATTTACGGGAAAACCATTGTATCCACCCATGGGAAAGTCTGTGATGGTTGTGGAGTCTGTTACAAAGGCAAAGAGATACCTTGGTGATATGTATGAAGTCTTGCCAAGCTATGGTCATGTAAGAGACTTGGCTTCAAGGTCTGGATCTGTGCGACCCGACGATGATTTTAGTATGGTGTGGGAAGTTCCCTCATCTGCCTGGACTCACCTGAAGAGCATCAATGCCGCATTGAGCGGAGCAAACAATCTTATCCTTGCATCAGATCCTGATCGTGAGGGAGAGGCTATCGCTTGGCACATTATTGAGATGTTACAACAACAGGGAGCTCTGCATAATAATATTTTTCTGGCTAGAGTTGTCTTTCATGAAATAACTGAGCAATCTATAAAAACTGCTTTGCAAACACCACGGGAGATTAATGTGAATTTGGTTCATGCTTACCTTGCACGGAGGGCCCTTGATTATTTGATTGGATTTAACATTTCGCCATTACTTTGGAGGAAGTTACCAAGTTGCCAATCAGCAGGAAGAGTTCAATCTGCTGCACTTTCTCTAATATGTGATAGAGAACTGGAAATTGATCAATTCAAACCCAAGGAATATTGGACTATGGAGGCCATGTTTAGTATCAAAGAGCAGAGATTAACCAAGGACTTAACATTTCTTGCTCACCTAACCCATTTCAATTCAAACAAGTTGAATCAATTTTCGGTTACTTCTGGTGAGGAGGCAAGGGATATTGAAAGCAAAATAAATTCTGCAGACTTTCGGGTTATTAGCATGAAAAAAAATAAAGTTAGACGAAAGCCTCCAACACCTTATATAACATCAACACTTCAGCAAGATGCTGCCAACAAATTGAATTTCTCAGCAAGTCACACAATGAAGCTTGCTCAGAAACTCTACGAGGGAGTTGAACTGACTAATGGTATATCAGCGGGTTTGATAACATACATCAGAACTGATGGACTCCATATTTCTGAAGACGCTGTTGCCAATATTCGCTCCCTGATCATTGAAAGGTATGGACAAAATTTTGTTGCACAAAGTCCGCCAAAGTATTTTAAAAAGGTAAAAAATGCACAAGAAGCCCATGAAGCCATTAGACCGACCGACATACGCAAGTTACCATCAATGCTGGCTGGGGTGTTAGATGAAGAATCCTTGAAGCTATACACACTTATATGGTCAAGAACAGTTTCTTGTCAGATGGAACAAGCTGTTCTTGAGAAGATACAACTTGATGTTGGAAATGCTGATCAGTCTATTGTGTTACGGTCTGCTAGCTCGAGGGTTGAGTTTCCTGGATATCGGGCAGTGTTTACGGACATTGTCACTGAAGCTGGACGAGACAGAGACAGTGACGGATCCAATCATGATCTAGCTTTTGAGGTTCTAAATTCATTAAAGACAGATGATTTGTTACATCTTGTTCAAACTGAGGCGAGTCAGCACCATACACAACCACCACCACGTTACTCTGAGGCATCACTGGTTAAGAAACTTGAAGAGCTTGGGATTGGAAGACCTTCAACGTATGCAAGCACATTAAAAGTATTAAAGGATAGAAACTACGTGACAGTAAAAAGCCGTGTTATCTCTCCAGAATTTCGTGGTCGTATGGTTTCAGCTTTTCTGTCACATCATTTTTCAGAAGTCACAGACTACAATTTCACTGCTGACATGGAAACTGAGCTTGATAATGTTTCTGCTGGAACAACCAAATGGAAAGGCCTCCTTGGAGATTATTGGACGCGGTTTAAATCATATTGTGACCGTACTTCTGATGTTCATATTCACCAGGTTGAGAAGATGTTAGAAAAAAAATTTGAGGATTATTTATTTGGCTCTTTCCCAAACAAGAGTCGTTCGTGTCCAAGTTGTACGGAAGGCACACTGATATTTAAAGTAAGTAGATTTGGTTCTGGCTACTTTATAGGCTGTGATCAACATCCGAGGTGCAAGTACATTGCTAAAACATATTATGGTGACGAGGAGGAGGATGATACACCTCAGCCAAACAAAACTATGATAGAGGAACCAAAAGTCCTAGGTTTAAATAGTTCAAATGAAAAGGTTCTTTTGAAAAATGGTCCTTATGGAATCTATGTTCAACTCGGAGAAGACGGGAAGGAATACACACCTAAAAGAACATCTGTTCCTTATGTTAAGGATTTGGACTCTACCACCCTTGAAGAAGCACTTGCGTTACTACAATATCCAGTGACATTGGGTAAGCATCCTGACGATGGAAAACCTGTCATATTAAAGGTCGCAAAGCTTGGCTATTCTATTAGACATGGAAAGACAATTGCTCCTGTTCCTAAGGATATGAAGCCAAGTGAAATCACCTATGAAAAGGCCCTTGAACTTTTATTAGGTGATAAAGTGAGAACTGTTGGTCGGCCCCCAGACAAGACTAAAGTTGCAGATGTTGAAGCTTAA
Protein sequence

>Msa0056690

MIQFQRNFFSTSTPSPSLRNLMFQLRSFHNPLISPPQLPPHVNVTNIAVHRCNRFPIRSFSVINNVTNFTNLKSVNVTFGSPFNGVGRSSPFSSTATEKKNKRKKTVKAVAVRGKDKDVKSSEPVVKDDVKNVDLGKTDLSEEIKSDEKDLKKKKKKKPVRSKKKDDVKISPAVSDSVEVVGKVEVSKKPSSKGKKTNSKESLSVTTSKETTDSSASTRSKKKEVNSCQVDLEKPLGKFTGKPLYPPMGKSVMVVESVTKAKRYLGDMYEVLPSYGHVRDLASRSGSVRPDDDFSMVWEVPSSAWTHLKSINAALSGANNLILASDPDREGEAIAWHIIEMLQQQGALHNNIFLARVVFHEITEQSIKTALQTPREINVNLVHAYLARRALDYLIGFNISPLLWRKLPSCQSAGRVQSAALSLICDRELEIDQFKPKEYWTMEAMFSIKEQRLTKDLTFLAHLTHFNSNKLNQFSVTSGEEARDIESKINSADFRVISMKKNKVRRKPPTPYITSTLQQDAANKLNFSASHTMKLAQKLYEGVELTNGISAGLITYIRTDGLHISEDAVANIRSLIIERYGQNFVAQSPPKYFKKVKNAQEAHEAIRPTDIRKLPSMLAGVLDEESLKLYTLIWSRTVSCQMEQAVLEKIQLDVGNADQSIVLRSASSRVEFPGYRAVFTDIVTEAGRDRDSDGSNHDLAFEVLNSLKTDDLLHLVQTEASQHHTQPPPRYSEASLVKKLEELGIGRPSTYASTLKVLKDRNYVTVKSRVISPEFRGRMVSAFLSHHFSEVTDYNFTADMETELDNVSAGTTKWKGLLGDYWTRFKSYCDRTSDVHIHQVEKMLEKKFEDYLFGSFPNKSRSCPSCTEGTLIFKVSRFGSGYFIGCDQHPRCKYIAKTYYGDEEEDDTPQPNKTMIEEPKVLGLNSSNEKVLLKNGPYGIYVQLGEDGKEYTPKRTSVPYVKDLDSTTLEEALALLQYPVTLGKHPDDGKPVILKVAKLGYSIRHGKTIAPVPKDMKPSEITYEKALELLLGDKVRTVGRPPDKTKVADVEA*