Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318520 | XP_003594504.2 | 97.421 | 504 | 8 | 1 | 1 | 499 | 1 | 504 | 0.0 | 1003 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318520 | sp|Q9M0V4|YAO_ARATH | 55.777 | 502 | 191 | 9 | 10 | 499 | 22 | 504 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0318520 | Msa1027640 | 0.804701 | 1.903452e-49 | -8.615850e-47 |
| Msa0318520 | Msa1275680 | 0.818567 | 1.832505e-52 | -8.615850e-47 |
| Msa0318520 | Msa1353430 | 0.807135 | 5.860896e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318520 | MtrunA17_Chr2g0292301 | 97.421 | 504 | 8 | 1 | 1 | 499 | 1 | 504 | 0.0 | 1003 |
| Msa0318520 | MtrunA17_Chr8g0392701 | 26.697 | 221 | 138 | 4 | 140 | 355 | 59 | 260 | 3.90e-16 | 79.3 |
| Msa0318520 | MtrunA17_Chr1g0176241 | 33.607 | 122 | 80 | 1 | 195 | 315 | 360 | 481 | 1.46e-15 | 79.0 |
| Msa0318520 | MtrunA17_Chr4g0059031 | 33.514 | 185 | 94 | 7 | 147 | 321 | 63 | 228 | 6.54e-15 | 77.8 |
| Msa0318520 | MtrunA17_Chr3g0093681 | 29.545 | 176 | 101 | 5 | 143 | 315 | 397 | 552 | 2.72e-14 | 75.5 |
| Msa0318520 | MtrunA17_Chr1g0172501 | 29.545 | 176 | 101 | 5 | 143 | 315 | 397 | 552 | 7.43e-14 | 73.9 |
| Msa0318520 | MtrunA17_Chr2g0295791 | 25.114 | 219 | 143 | 3 | 139 | 355 | 207 | 406 | 6.53e-13 | 70.9 |
| Msa0318520 | MtrunA17_Chr5g0401671 | 26.724 | 232 | 161 | 6 | 140 | 367 | 243 | 469 | 6.76e-13 | 71.2 |
| Msa0318520 | MtrunA17_Chr7g0246741 | 29.375 | 160 | 94 | 3 | 137 | 295 | 404 | 545 | 1.69e-12 | 70.1 |
| Msa0318520 | MtrunA17_Chr4g0053651 | 21.914 | 324 | 209 | 7 | 143 | 438 | 229 | 536 | 2.17e-12 | 69.3 |
| Msa0318520 | MtrunA17_Chr1g0200901 | 30.588 | 170 | 113 | 4 | 202 | 367 | 77 | 245 | 6.29e-12 | 67.4 |
| Msa0318520 | MtrunA17_Chr4g0067151 | 22.845 | 232 | 151 | 6 | 143 | 366 | 77 | 288 | 6.44e-12 | 66.6 |
| Msa0318520 | MtrunA17_Chr4g0067151 | 24.891 | 229 | 144 | 7 | 138 | 355 | 21 | 232 | 3.88e-11 | 64.3 |
| Msa0318520 | MtrunA17_Chr1g0185501 | 21.519 | 237 | 160 | 5 | 137 | 366 | 62 | 279 | 8.18e-12 | 66.2 |
| Msa0318520 | MtrunA17_Chr4g0069701 | 26.404 | 178 | 117 | 4 | 192 | 355 | 516 | 693 | 8.82e-12 | 67.8 |
| Msa0318520 | MtrunA17_Chr4g0069701 | 27.848 | 158 | 94 | 4 | 165 | 321 | 85 | 223 | 1.77e-11 | 67.0 |
| Msa0318520 | MtrunA17_Chr4g0058091 | 22.944 | 231 | 163 | 5 | 220 | 437 | 245 | 473 | 2.04e-11 | 66.2 |
| Msa0318520 | MtrunA17_Chr3g0136971 | 35.000 | 120 | 59 | 2 | 161 | 280 | 520 | 620 | 2.62e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318520 | AT4G05410.1 | 55.777 | 502 | 191 | 9 | 10 | 499 | 22 | 504 | 0.0 | 528 |
| Msa0318520 | AT4G21130.1 | 53.386 | 502 | 200 | 6 | 1 | 499 | 9 | 479 | 1.27e-176 | 505 |
| Msa0318520 | AT3G18130.1 | 24.671 | 304 | 184 | 9 | 140 | 437 | 59 | 323 | 1.90e-16 | 80.9 |
| Msa0318520 | AT1G48630.1 | 24.342 | 304 | 185 | 9 | 140 | 437 | 59 | 323 | 1.48e-15 | 78.2 |
| Msa0318520 | AT1G48630.1 | 26.778 | 239 | 147 | 8 | 139 | 366 | 10 | 231 | 1.74e-12 | 68.9 |
| Msa0318520 | AT5G52820.1 | 32.520 | 123 | 82 | 1 | 195 | 316 | 350 | 472 | 3.01e-15 | 78.6 |
| Msa0318520 | AT2G32700.2 | 24.286 | 210 | 116 | 4 | 203 | 369 | 508 | 717 | 7.40e-15 | 77.8 |
| Msa0318520 | AT2G32700.5 | 24.286 | 210 | 116 | 4 | 203 | 369 | 508 | 717 | 7.40e-15 | 77.8 |
| Msa0318520 | AT2G32700.1 | 24.286 | 210 | 116 | 4 | 203 | 369 | 508 | 717 | 7.40e-15 | 77.8 |
| Msa0318520 | AT2G32700.4 | 24.286 | 210 | 116 | 4 | 203 | 369 | 508 | 717 | 7.40e-15 | 77.8 |
| Msa0318520 | AT2G32700.3 | 24.286 | 210 | 116 | 4 | 203 | 369 | 508 | 717 | 7.40e-15 | 77.8 |
| Msa0318520 | AT2G32700.6 | 24.286 | 210 | 116 | 4 | 203 | 369 | 506 | 715 | 7.59e-15 | 77.8 |
| Msa0318520 | AT2G32700.7 | 24.286 | 210 | 116 | 4 | 203 | 369 | 527 | 736 | 8.71e-15 | 77.8 |
| Msa0318520 | AT5G16750.1 | 32.967 | 182 | 96 | 6 | 147 | 321 | 63 | 225 | 9.68e-15 | 77.8 |
| Msa0318520 | AT3G21540.1 | 32.911 | 158 | 86 | 4 | 165 | 321 | 85 | 223 | 4.86e-14 | 75.5 |
| Msa0318520 | AT1G18080.1 | 25.225 | 222 | 141 | 4 | 140 | 355 | 59 | 261 | 1.32e-13 | 72.4 |
| Msa0318520 | AT5G67320.1 | 26.293 | 232 | 162 | 5 | 140 | 367 | 261 | 487 | 3.36e-13 | 72.4 |
| Msa0318520 | AT2G05720.1 | 26.437 | 261 | 159 | 9 | 65 | 296 | 8 | 264 | 1.40e-12 | 68.6 |
| Msa0318520 | AT1G61210.3 | 28.713 | 202 | 121 | 5 | 137 | 315 | 51 | 252 | 2.81e-12 | 70.1 |
| Msa0318520 | AT1G61210.2 | 29.487 | 156 | 89 | 2 | 161 | 315 | 117 | 252 | 3.35e-12 | 69.7 |
| Msa0318520 | AT1G61210.1 | 29.487 | 156 | 89 | 2 | 161 | 315 | 117 | 252 | 3.38e-12 | 69.7 |
| Msa0318520 | AT4G15900.1 | 25.114 | 219 | 143 | 3 | 139 | 355 | 213 | 412 | 5.30e-12 | 68.6 |
| Msa0318520 | AT1G11160.3 | 26.238 | 202 | 126 | 4 | 137 | 315 | 9 | 210 | 8.19e-12 | 68.6 |
| Msa0318520 | AT1G24130.1 | 27.957 | 186 | 104 | 7 | 141 | 316 | 189 | 354 | 1.44e-11 | 66.6 |
| Msa0318520 | AT1G11160.4 | 26.500 | 200 | 124 | 4 | 139 | 315 | 53 | 252 | 1.74e-11 | 67.4 |
| Msa0318520 | AT1G11160.2 | 26.500 | 200 | 124 | 4 | 139 | 315 | 53 | 252 | 1.91e-11 | 67.4 |
| Msa0318520 | AT1G11160.1 | 26.500 | 200 | 124 | 4 | 139 | 315 | 53 | 252 | 1.91e-11 | 67.4 |
| Msa0318520 | AT5G50230.1 | 22.318 | 233 | 162 | 7 | 220 | 437 | 240 | 468 | 2.00e-11 | 66.6 |
| Msa0318520 | AT1G15440.1 | 28.125 | 160 | 96 | 3 | 137 | 295 | 424 | 565 | 2.57e-11 | 66.6 |
| Msa0318520 | AT1G15440.2 | 28.125 | 160 | 96 | 3 | 137 | 295 | 384 | 525 | 2.68e-11 | 66.6 |
| Msa0318520 | AT5G25150.1 | 32.500 | 120 | 62 | 2 | 161 | 280 | 519 | 619 | 6.66e-11 | 65.5 |
| Msa0318520 | AT5G25150.2 | 32.500 | 120 | 62 | 2 | 161 | 280 | 519 | 619 | 7.05e-11 | 65.1 |
| Msa0318520 | AT5G15550.1 | 27.222 | 180 | 107 | 5 | 139 | 314 | 267 | 426 | 8.51e-11 | 64.3 |
| Msa0318520 | AT5G15550.3 | 27.222 | 180 | 107 | 5 | 139 | 314 | 267 | 426 | 8.51e-11 | 64.3 |
| Msa0318520 | AT1G24530.1 | 25.703 | 249 | 126 | 10 | 141 | 362 | 192 | 408 | 8.87e-11 | 64.3 |
Find 138 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTAGTATGCAGTTGTTTA+AGG | 0.158441 | 2_4:+17530989 | Msa0318520:CDS |
| ATTTGGGAAATTTGAGATTT+TGG | 0.169592 | 2_4:-17529319 | None:intergenic |
| GGGTTAGGGTTTCAGAGATT+TGG | 0.240860 | 2_4:-17529336 | None:intergenic |
| ATGAAGAGGTTTAATGTCTT+TGG | 0.241848 | 2_4:-17531844 | None:intergenic |
| TTGATCGTCATATTCATATA+TGG | 0.261547 | 2_4:+17530295 | Msa0318520:CDS |
| TTTATCTGAGGATGATTCTA+AGG | 0.262062 | 2_4:+17530074 | Msa0318520:CDS |
| GGTTAGGGTTTCAGAGATTT+GGG | 0.286494 | 2_4:-17529335 | None:intergenic |
| GCGGGCATGATTGAATTGTT+AGG | 0.297387 | 2_4:-17529357 | None:intergenic |
| TTCTTGCGGTTGTTCTTTGC+GGG | 0.303078 | 2_4:-17529375 | None:intergenic |
| TTGCTGCTCCTTTATCATCT+TGG | 0.312953 | 2_4:-17529694 | None:intergenic |
| TGATGGTAGCATTGAGCTTT+GGG | 0.320486 | 2_4:+17531342 | Msa0318520:CDS |
| GATGGTCGCTATTTGGCTAC+TGG | 0.333149 | 2_4:+17530267 | Msa0318520:CDS |
| ATGATTGAATTGTTAGGGTT+AGG | 0.333769 | 2_4:-17529351 | None:intergenic |
| TGTGTTATTCAGGGTTAAAT+TGG | 0.347385 | 2_4:+17529993 | Msa0318520:intron |
| AACAAAACAACAGCATTCTA+AGG | 0.349174 | 2_4:-17531290 | None:intergenic |
| CTTCTTGCGGTTGTTCTTTG+CGG | 0.352672 | 2_4:-17529376 | None:intergenic |
| TAGAGGTCCTGTTTCTTCTC+TGG | 0.361793 | 2_4:+17530800 | Msa0318520:CDS |
| TTCAAAATTCTCAAAACAAT+CGG | 0.367746 | 2_4:-17533543 | None:intergenic |
| TTTGACTTTGGCTGCAAGTT+CGG | 0.370464 | 2_4:+17530245 | Msa0318520:CDS |
| TGATTGAATTGTTAGGGTTA+GGG | 0.371619 | 2_4:-17529350 | None:intergenic |
| TCAGCAAAATTCCTAGTTGC+TGG | 0.374225 | 2_4:+17532020 | Msa0318520:CDS |
| GCGCACTAGGGAGCATCTTC+AGG | 0.377779 | 2_4:+17530323 | Msa0318520:CDS |
| TTGATCGAACGATTAAGATA+TGG | 0.379793 | 2_4:+17530862 | Msa0318520:CDS |
| ATGATGGTAGCATTGAGCTT+TGG | 0.379946 | 2_4:+17531341 | Msa0318520:CDS |
| AACAGTGACCTTGCCGCATC+TGG | 0.381669 | 2_4:+17531777 | Msa0318520:CDS |
| GGCGGCTACTCTGCGGCGTT+TGG | 0.384477 | 2_4:-17529433 | None:intergenic |
| GGCTACTCTGCGGCGTTTGG+TGG | 0.386767 | 2_4:-17529430 | None:intergenic |
| AAGTTCGGATGGTCGCTATT+TGG | 0.391946 | 2_4:+17530260 | Msa0318520:CDS |
| AATAATGAGGAATTCTTGTC+TGG | 0.393333 | 2_4:+17531313 | Msa0318520:CDS |
| GAGTAGCTGAGGAGTATTTG+AGG | 0.396735 | 2_4:+17529577 | Msa0318520:CDS |
| GCCGCATCTGGTGCGGGCAA+TGG | 0.400402 | 2_4:+17531789 | Msa0318520:CDS |
| ATTGTTCGTCAGTACACTCT+TGG | 0.407718 | 2_4:+17531730 | Msa0318520:CDS |
| TCAGAAAAGCTATTGCTTCA+AGG | 0.412080 | 2_4:+17529733 | Msa0318520:CDS |
| CGGGCATGATTGAATTGTTA+GGG | 0.419522 | 2_4:-17529356 | None:intergenic |
| ACTATGAGTAAGCGAGGCTT+TGG | 0.431847 | 2_4:+17533682 | Msa0318520:three_prime_UTR |
| ATCGAAAGGTGATGAGGAAC+AGG | 0.431917 | 2_4:+17529518 | Msa0318520:CDS |
| CCTAGTTGCTGGAGTTGGTC+AGG | 0.436258 | 2_4:+17532031 | Msa0318520:CDS |
| TCTGAAGTCTCATGGCTTGA+AGG | 0.437606 | 2_4:+17530185 | Msa0318520:CDS |
| TGAGGAATTCTTGTCTGGTT+CGG | 0.438253 | 2_4:+17531318 | Msa0318520:CDS |
| TTGATTGTTTACGCAAAGAA+AGG | 0.438257 | 2_4:+17530946 | Msa0318520:CDS |
| TTCTTGTCTGGTTCGGATGA+TGG | 0.442227 | 2_4:+17531325 | Msa0318520:CDS |
| TACTTAATACTTCACTTTGG+TGG | 0.445587 | 2_4:-17530923 | None:intergenic |
| AGACTTCAGAACCGAATCAA+TGG | 0.449071 | 2_4:-17530172 | None:intergenic |
| GCTATCGACCAAGATGATAA+AGG | 0.457458 | 2_4:+17529686 | Msa0318520:CDS |
| ACCTACATGAATACTCTGTT+TGG | 0.458123 | 2_4:+17530900 | Msa0318520:CDS |
| TGATCGTCATATTCATATAT+GGG | 0.461527 | 2_4:+17530296 | Msa0318520:CDS |
| GTATAAGTGGCCCATTGATT+CGG | 0.462919 | 2_4:+17530161 | Msa0318520:CDS |
| ATGAAGATGAGGATGGGGCG+AGG | 0.464919 | 2_4:+17529658 | Msa0318520:CDS |
| GACCTTGCCGCATCTGGTGC+GGG | 0.471991 | 2_4:+17531783 | Msa0318520:CDS |
| AGATACAAAGGTTGCTGCTA+GGG | 0.472512 | 2_4:-17529274 | None:intergenic |
| ATGGTCGCTATTTGGCTACT+GGG | 0.473124 | 2_4:+17530268 | Msa0318520:CDS |
| GATTCGGTTCTGAAGTCTCA+TGG | 0.477291 | 2_4:+17530177 | Msa0318520:CDS |
| GCATTCCTCAAAATATGAAT+AGG | 0.478685 | 2_4:-17531382 | None:intergenic |
| TGACGAACAATGGTGATTCT+CGG | 0.481332 | 2_4:-17531718 | None:intergenic |
| GACGAACAATGGTGATTCTC+GGG | 0.482880 | 2_4:-17531717 | None:intergenic |
| GGAAGTTTAAAGATAGTGCT+AGG | 0.483861 | 2_4:+17529598 | Msa0318520:CDS |
| TCTCATGATGACAATTTAAG+TGG | 0.485861 | 2_4:-17533397 | None:intergenic |
| GCTACTCTGCGGCGTTTGGT+GGG | 0.489709 | 2_4:-17529429 | None:intergenic |
| GTTAAATTGGATGGTGATGG+TGG | 0.493603 | 2_4:+17530006 | Msa0318520:CDS |
| TGACCTTGCCGCATCTGGTG+CGG | 0.495955 | 2_4:+17531782 | Msa0318520:CDS |
| TCAAAATTCTCAAAACAATC+GGG | 0.497032 | 2_4:-17533542 | None:intergenic |
| CTAAAAGCCAGAGAAGAAAC+AGG | 0.502189 | 2_4:-17530807 | None:intergenic |
| GATACATATAATTAATATCA+TGG | 0.502319 | 2_4:-17533496 | None:intergenic |
| AGATGGAAGCATTGTGCAAT+GGG | 0.503563 | 2_4:+17530113 | Msa0318520:CDS |
| TTGTTCGTCAGTACACTCTT+GGG | 0.515002 | 2_4:+17531731 | Msa0318520:CDS |
| AGAATACGTGAAGCTCGAAA+TGG | 0.516436 | 2_4:+17533361 | Msa0318520:CDS |
| CTCAGCATCTTGATCTTCAT+CGG | 0.521698 | 2_4:-17529454 | None:intergenic |
| AAATTCCTAGTTGCTGGAGT+TGG | 0.523394 | 2_4:+17532026 | Msa0318520:CDS |
| GGTCGCTATTTGGCTACTGG+GGG | 0.524621 | 2_4:+17530270 | Msa0318520:CDS |
| ACCATTGCCCGCACCAGATG+CGG | 0.524847 | 2_4:-17531790 | None:intergenic |
| CAATACTTAATACTTCACTT+TGG | 0.525590 | 2_4:-17530926 | None:intergenic |
| GACTTCAGAACCGAATCAAT+GGG | 0.526962 | 2_4:-17530171 | None:intergenic |
| CAGATACAAAGGTTGCTGCT+AGG | 0.529875 | 2_4:-17529275 | None:intergenic |
| GCAATTAGTCAAAATTGAAG+AGG | 0.530500 | 2_4:-17533441 | None:intergenic |
| ACTTTGGCTGCAAGTTCGGA+TGG | 0.530603 | 2_4:+17530249 | Msa0318520:CDS |
| ATATATGGGATACGCGCACT+AGG | 0.531446 | 2_4:+17530310 | Msa0318520:CDS |
| TGTTCCTCATCACCTTTCGA+TGG | 0.533949 | 2_4:-17529516 | None:intergenic |
| AGGAAACCACAGCTGAAGCT+AGG | 0.534107 | 2_4:+17529550 | Msa0318520:CDS |
| TTATCTGAGGATGATTCTAA+GGG | 0.538043 | 2_4:+17530075 | Msa0318520:CDS |
| TGAAGATGAGGATGGGGCGA+GGG | 0.541288 | 2_4:+17529659 | Msa0318520:CDS |
| ACCTCTTCATAATGTACCGT+TGG | 0.541442 | 2_4:+17531857 | Msa0318520:CDS |
| AAAGAAAGGGTATTATCTGC+TGG | 0.543326 | 2_4:+17530960 | Msa0318520:CDS |
| CCTGACCAACTCCAGCAACT+AGG | 0.547034 | 2_4:-17532031 | None:intergenic |
| TGGTCGCTATTTGGCTACTG+GGG | 0.547163 | 2_4:+17530269 | Msa0318520:CDS |
| AGGTTTACCTAGGTTACCGT+TGG | 0.548172 | 2_4:-17531461 | None:intergenic |
| TGATTGTTTACGCAAAGAAA+GGG | 0.549662 | 2_4:+17530947 | Msa0318520:CDS |
| TTATTCAGGGTTAAATTGGA+TGG | 0.552595 | 2_4:+17529997 | Msa0318520:intron |
| AGGAACCTCGTCTAGGAAGG+TGG | 0.554796 | 2_4:+17533335 | Msa0318520:intron |
| TACAGGAACCTCGTCTAGGA+AGG | 0.557034 | 2_4:+17533332 | Msa0318520:intron |
| CAGCATTCTAAGGAAGATGC+AGG | 0.563049 | 2_4:-17531280 | None:intergenic |
| ATACTACCCAACGGTAACCT+AGG | 0.563236 | 2_4:+17531454 | Msa0318520:CDS |
| GGAACCTCGTCTAGGAAGGT+GGG | 0.567525 | 2_4:+17533336 | Msa0318520:intron |
| AGGGTTAAATTGGATGGTGA+TGG | 0.568487 | 2_4:+17530003 | Msa0318520:intron |
| GATGATGATGAAGATGAGGA+TGG | 0.575039 | 2_4:+17529651 | Msa0318520:CDS |
| AAGATGGAAGCATTGTGCAA+TGG | 0.576859 | 2_4:+17530112 | Msa0318520:CDS |
| CTTCCCCACCTTCCTAGACG+AGG | 0.577906 | 2_4:-17533340 | None:intergenic |
| AACAATGGTGATTCTCGGGA+TGG | 0.581006 | 2_4:-17531713 | None:intergenic |
| AGCTAGGAAGAGAGTAGCTG+AGG | 0.585734 | 2_4:+17529566 | Msa0318520:CDS |
| GGTTTACCTAGGTTACCGTT+GGG | 0.589730 | 2_4:-17531460 | None:intergenic |
| AGATAGTGCTAGGAGAGAGA+AGG | 0.590376 | 2_4:+17529608 | Msa0318520:CDS |
| TGCCCGCACCAGATGCGGCA+AGG | 0.595355 | 2_4:-17531785 | None:intergenic |
| GGAAATGTGAGAGGTATAAG+TGG | 0.597715 | 2_4:+17530148 | Msa0318520:CDS |
| ACCAACGGTACATTATGAAG+AGG | 0.598217 | 2_4:-17531858 | None:intergenic |
| TGATGATGAAGATGAGGATG+GGG | 0.598492 | 2_4:+17529653 | Msa0318520:CDS |
| ATGATGATGAAGATGAGGAT+GGG | 0.602093 | 2_4:+17529652 | Msa0318520:CDS |
| GTCGCTATTTGGCTACTGGG+GGG | 0.602659 | 2_4:+17530271 | Msa0318520:CDS |
| TACTGCGGTGGCTTTATCTG+AGG | 0.604178 | 2_4:+17530062 | Msa0318520:CDS |
| TCTCTTCCTAGCTTCAGCTG+TGG | 0.605399 | 2_4:-17529556 | None:intergenic |
| TGTTCCATCGAAAGGTGATG+AGG | 0.606852 | 2_4:+17529512 | Msa0318520:CDS |
| GAACCTCGTCTAGGAAGGTG+GGG | 0.608130 | 2_4:+17533337 | Msa0318520:CDS |
| TCAGTGCAGTGACCGTCTGT+AGG | 0.612967 | 2_4:+17531754 | Msa0318520:CDS |
| TGCAATGGGATGTTGAGAGT+GGG | 0.616349 | 2_4:+17530127 | Msa0318520:CDS |
| ACAACTGCATACTACGATCA+CGG | 0.616853 | 2_4:-17530983 | None:intergenic |
| TTGAGAGTGGGAAATGTGAG+AGG | 0.619145 | 2_4:+17530139 | Msa0318520:CDS |
| TGCTTTGTAGCAGAACCTTG+AGG | 0.621073 | 2_4:-17530210 | None:intergenic |
| TATATGGGATACGCGCACTA+GGG | 0.624499 | 2_4:+17530311 | Msa0318520:CDS |
| GGTCGCGTGAATTCTTCTTG+CGG | 0.627721 | 2_4:-17529389 | None:intergenic |
| GATGATAAAGGAGCAGCAAG+AGG | 0.629548 | 2_4:+17529698 | Msa0318520:CDS |
| TGAGGAACAGGAGTCTGAAG+AGG | 0.632989 | 2_4:+17529530 | Msa0318520:CDS |
| AAGGTCACTGTTCCTACAGA+CGG | 0.637361 | 2_4:-17531766 | None:intergenic |
| AAGAGTGTACTGACGAACAA+TGG | 0.638794 | 2_4:-17531728 | None:intergenic |
| AAACGATCCAGAAAATAGCT+CGG | 0.640991 | 2_4:-17530841 | None:intergenic |
| GAAACAGGACCTCTATGACC+AGG | 0.641871 | 2_4:-17530792 | None:intergenic |
| AAGGAGCAGCAAGAGGAGAG+TGG | 0.643486 | 2_4:+17529705 | Msa0318520:CDS |
| AGCATCTTGATCTTCATCGG+CGG | 0.643638 | 2_4:-17529451 | None:intergenic |
| CATGGCTTGAAGGATCCTCA+AGG | 0.643817 | 2_4:+17530195 | Msa0318520:CDS |
| GATTAAGATATGGAATGTTG+AGG | 0.643891 | 2_4:+17530872 | Msa0318520:CDS |
| AATTGTCATCATGAGATGTG+AGG | 0.644445 | 2_4:+17533404 | Msa0318520:exon |
| TAAACAATGTGTTACTGCGG+TGG | 0.645198 | 2_4:+17530050 | Msa0318520:CDS |
| AATGGTGATTCTCGGGATGG+TGG | 0.653592 | 2_4:-17531710 | None:intergenic |
| GTGCAATGGGATGTTGAGAG+TGG | 0.654323 | 2_4:+17530126 | Msa0318520:CDS |
| GATGGTAGCATTGAGCTTTG+GGG | 0.661259 | 2_4:+17531343 | Msa0318520:CDS |
| GATAGTGAAATACTACCCAA+CGG | 0.686398 | 2_4:+17531445 | Msa0318520:CDS |
| TCTATGACTATGAGTAAGCG+AGG | 0.696896 | 2_4:+17533676 | Msa0318520:three_prime_UTR |
| TATCTGAGGATGATTCTAAG+GGG | 0.700099 | 2_4:+17530076 | Msa0318520:CDS |
| GCCAAACAGAGTATTCATGT+AGG | 0.705733 | 2_4:-17530901 | None:intergenic |
| CTTCATCGGCGGCTACTCTG+CGG | 0.710277 | 2_4:-17529440 | None:intergenic |
| GCATAAACAATGTGTTACTG+CGG | 0.761595 | 2_4:+17530047 | Msa0318520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTCAAAAATAAAATTGT+TGG | + | chr2_4:17530396-17530415 | Msa0318520:intron | 10.0% |
| !! | TAAGTGATTAATTAATTAAT+AGG | + | chr2_4:17531117-17531136 | Msa0318520:intron | 10.0% |
| !! | ATTATTCAATTAAACCAAAA+GGG | - | chr2_4:17529848-17529867 | None:intergenic | 15.0% |
| !! | AATTATTCAATTAAACCAAA+AGG | - | chr2_4:17529849-17529868 | None:intergenic | 15.0% |
| !! | ATTATTCAATTAAACCAAAA+GGG | - | chr2_4:17529848-17529867 | None:intergenic | 15.0% |
| !! | AATTATTCAATTAAACCAAA+AGG | - | chr2_4:17529849-17529868 | None:intergenic | 15.0% |
| !!! | TAAAATTGTTGGATATTTTT+TGG | + | chr2_4:17530407-17530426 | Msa0318520:intron | 15.0% |
| !!! | AAAATTGTTGGATATTTTTT+GGG | + | chr2_4:17530408-17530427 | Msa0318520:intron | 15.0% |
| !! | GAATTACTAAATACAAATTA+AGG | - | chr2_4:17530655-17530674 | None:intergenic | 15.0% |
| !! | AATTTGTATTTAGTAATTCT+TGG | + | chr2_4:17530656-17530675 | Msa0318520:intron | 15.0% |
| !!! | ATTTTACTTAATTTTCTCTT+TGG | + | chr2_4:17532109-17532128 | Msa0318520:intron | 15.0% |
| !! | GATACATATAATTAATATCA+TGG | - | chr2_4:17533499-17533518 | None:intergenic | 15.0% |
| !!! | ATTTGAGATTTTGGTTTTTA+GGG | - | chr2_4:17529313-17529332 | None:intergenic | 20.0% |
| !!! | AATTTGAGATTTTGGTTTTT+AGG | - | chr2_4:17529314-17529333 | None:intergenic | 20.0% |
| !! | TGAATAATTATTGAAACAGT+TGG | + | chr2_4:17529860-17529879 | Msa0318520:intron | 20.0% |
| !! | TAATTGAATAATTGAAGCAA+TGG | + | chr2_4:17529915-17529934 | Msa0318520:intron | 20.0% |
| !! | AATTGAATAATTGAAGCAAT+GGG | + | chr2_4:17529916-17529935 | Msa0318520:intron | 20.0% |
| !!! | AAATTGTTGGATATTTTTTG+GGG | + | chr2_4:17530409-17530428 | Msa0318520:intron | 20.0% |
| !! | TTGTTTGTATTTACAGATTA+AGG | + | chr2_4:17530477-17530496 | Msa0318520:intron | 20.0% |
| !! | TGTTTGTATTTACAGATTAA+GGG | + | chr2_4:17530478-17530497 | Msa0318520:intron | 20.0% |
| !! | ATGTTATATGTTAACATAAG+CGG | + | chr2_4:17530621-17530640 | Msa0318520:intron | 20.0% |
| !!! | ATTTTTTTTCCTATCTTCAA+AGG | + | chr2_4:17531142-17531161 | Msa0318520:intron | 20.0% |
| !! | ACTATCAATACAGTATTTAA+AGG | - | chr2_4:17531484-17531503 | None:intergenic | 20.0% |
| !! | ATATTAAGAAAAGTAAGCAA+AGG | - | chr2_4:17531549-17531568 | None:intergenic | 20.0% |
| !! | TAGAAGTTAGTTAATTGTTA+TGG | + | chr2_4:17532587-17532606 | Msa0318520:intron | 20.0% |
| !! | AGAAGTTAGTTAATTGTTAT+GGG | + | chr2_4:17532588-17532607 | Msa0318520:intron | 20.0% |
| !! | TGAAGGAATTAATAACATTA+AGG | + | chr2_4:17532809-17532828 | Msa0318520:intron | 20.0% |
| !! | GAAGGAATTAATAACATTAA+GGG | + | chr2_4:17532810-17532829 | Msa0318520:intron | 20.0% |
| !! | TATCGAGTAACTAATAAATA+TGG | + | chr2_4:17533008-17533027 | Msa0318520:intron | 20.0% |
| !! | TTAGTGTATTGTTTGTTTAA+TGG | + | chr2_4:17533154-17533173 | Msa0318520:intron | 20.0% |
| !! | TAGTGTATTGTTTGTTTAAT+GGG | + | chr2_4:17533155-17533174 | Msa0318520:intron | 20.0% |
| !!! | TTAACAAAATGTCTTTTTAC+AGG | + | chr2_4:17533315-17533334 | Msa0318520:intron | 20.0% |
| !! | TTCAAAATTCTCAAAACAAT+CGG | - | chr2_4:17533546-17533565 | None:intergenic | 20.0% |
| !!! | ATTTGGGAAATTTGAGATTT+TGG | - | chr2_4:17529322-17529341 | None:intergenic | 25.0% |
| ! | TTTGGCTAAATTGATTGATT+TGG | + | chr2_4:17529969-17529988 | Msa0318520:intron | 25.0% |
| !! | TTGGCTAAATTGATTGATTT+GGG | + | chr2_4:17529970-17529989 | Msa0318520:intron | 25.0% |
| ! | TTGATCGTCATATTCATATA+TGG | + | chr2_4:17530295-17530314 | Msa0318520:CDS | 25.0% |
| ! | TGATCGTCATATTCATATAT+GGG | + | chr2_4:17530296-17530315 | Msa0318520:CDS | 25.0% |
| ! | CAAAGTTTCAAAGAATGAAA+AGG | - | chr2_4:17530357-17530376 | None:intergenic | 25.0% |
| !!! | AAACTTTGAAATGAACAACA+AGG | + | chr2_4:17530369-17530388 | Msa0318520:intron | 25.0% |
| !!! | AATTGTTGGATATTTTTTGG+GGG | + | chr2_4:17530410-17530429 | Msa0318520:intron | 25.0% |
| ! | CAATACTTAATACTTCACTT+TGG | - | chr2_4:17530929-17530948 | None:intergenic | 25.0% |
| ! | ATATACTTAAGACTTCATCT+TGG | - | chr2_4:17531023-17531042 | None:intergenic | 25.0% |
| ! | AAGATGAAGTCTTAAGTATA+TGG | + | chr2_4:17531022-17531041 | Msa0318520:intron | 25.0% |
| ! | CAAAACCATATTGTATATGT+CGG | + | chr2_4:17531048-17531067 | Msa0318520:intron | 25.0% |
| ! | ATGTGTATTCTCTGTAATTT+AGG | + | chr2_4:17531225-17531244 | Msa0318520:intron | 25.0% |
| !!! | CTGTTGTTTTGTTAATAATG+AGG | + | chr2_4:17531300-17531319 | Msa0318520:CDS | 25.0% |
| !! | GTAGTATTTCACTATCTTTT+TGG | - | chr2_4:17531441-17531460 | None:intergenic | 25.0% |
| !! | CATAAGAAGTAATTTTCTGA+AGG | - | chr2_4:17531508-17531527 | None:intergenic | 25.0% |
| ! | GTTATAGTTAGCATTATGTT+AGG | + | chr2_4:17531649-17531668 | Msa0318520:intron | 25.0% |
| ! | TAGCAACTAAACTCATTTAT+CGG | + | chr2_4:17531892-17531911 | Msa0318520:intron | 25.0% |
| !! | TAATGAATCTTTTGTATCAC+AGG | + | chr2_4:17531965-17531984 | Msa0318520:intron | 25.0% |
| !!! | TTACTCTGTTTTTTCTTCTT+TGG | + | chr2_4:17532081-17532100 | Msa0318520:intron | 25.0% |
| ! | GATCACTATTTCAAAAAAGA+TGG | - | chr2_4:17532213-17532232 | None:intergenic | 25.0% |
| ! | TCAAAAATTGTGTTGTAGAA+GGG | - | chr2_4:17532339-17532358 | None:intergenic | 25.0% |
| !! | AAAGAAATAAAGAAGTGCAA+GGG | - | chr2_4:17532440-17532459 | None:intergenic | 25.0% |
| !! | AAAAGAAATAAAGAAGTGCA+AGG | - | chr2_4:17532441-17532460 | None:intergenic | 25.0% |
| !! | TTTTCTGTCAATAGAGTTTA+AGG | - | chr2_4:17532510-17532529 | None:intergenic | 25.0% |
| ! | AGCCTTAAAAATTTCTACTT+CGG | + | chr2_4:17532535-17532554 | Msa0318520:intron | 25.0% |
| !! | ATCCGAAGTAGAAATTTTTA+AGG | - | chr2_4:17532540-17532559 | None:intergenic | 25.0% |
| ! | TTAGCATGAGCATATTAATA+TGG | + | chr2_4:17532612-17532631 | Msa0318520:intron | 25.0% |
| ! | TCACTTTAATCACTTAACAT+GGG | - | chr2_4:17532792-17532811 | None:intergenic | 25.0% |
| ! | TTCACTTTAATCACTTAACA+TGG | - | chr2_4:17532793-17532812 | None:intergenic | 25.0% |
| ! | ATGTTAAGTGATTAAAGTGA+AGG | + | chr2_4:17532792-17532811 | Msa0318520:intron | 25.0% |
| ! | ATTAATAACATTAAGGGTCT+CGG | + | chr2_4:17532816-17532835 | Msa0318520:intron | 25.0% |
| ! | TTTAGTAAACTCCATTTAGA+AGG | + | chr2_4:17532931-17532950 | Msa0318520:intron | 25.0% |
| !!! | AATGAAATTAGCCTTCTAAA+TGG | - | chr2_4:17532945-17532964 | None:intergenic | 25.0% |
| ! | TTAAGTTAAAAGCAAGAGTT+AGG | - | chr2_4:17533047-17533066 | None:intergenic | 25.0% |
| ! | TACAATTTCTGTTTAGATTG+AGG | + | chr2_4:17533125-17533144 | Msa0318520:intron | 25.0% |
| ! | TCAAAATTCTCAAAACAATC+GGG | - | chr2_4:17533545-17533564 | None:intergenic | 25.0% |
| ! | TTTTGATGAGACAGATACAA+AGG | - | chr2_4:17529289-17529308 | None:intergenic | 30.0% |
| TGATTGAATTGTTAGGGTTA+GGG | - | chr2_4:17529353-17529372 | None:intergenic | 30.0% | |
| ATGATTGAATTGTTAGGGTT+AGG | - | chr2_4:17529354-17529373 | None:intergenic | 30.0% | |
| ! | TGATTTCAATGTGACTCTTT+TGG | + | chr2_4:17529951-17529970 | Msa0318520:intron | 30.0% |
| ! | TGTGTTATTCAGGGTTAAAT+TGG | + | chr2_4:17529993-17530012 | Msa0318520:intron | 30.0% |
| TTATTCAGGGTTAAATTGGA+TGG | + | chr2_4:17529997-17530016 | Msa0318520:intron | 30.0% | |
| TTTATCTGAGGATGATTCTA+AGG | + | chr2_4:17530074-17530093 | Msa0318520:CDS | 30.0% | |
| TTATCTGAGGATGATTCTAA+GGG | + | chr2_4:17530075-17530094 | Msa0318520:CDS | 30.0% | |
| !!! | AAGTAGACAGATTTTGACTT+TGG | + | chr2_4:17530233-17530252 | Msa0318520:CDS | 30.0% |
| ! | AATTTTACCAAACAAGGGAA+AGG | - | chr2_4:17530515-17530534 | None:intergenic | 30.0% |
| ! | GTGACAATTTTACCAAACAA+GGG | - | chr2_4:17530520-17530539 | None:intergenic | 30.0% |
| ! | TGTGACAATTTTACCAAACA+AGG | - | chr2_4:17530521-17530540 | None:intergenic | 30.0% |
| ! | CAAAAGTACAAGCCTATTTA+TGG | + | chr2_4:17530685-17530704 | Msa0318520:intron | 30.0% |
| TATTTATGGCCAAATCTGTA+GGG | + | chr2_4:17530699-17530718 | Msa0318520:intron | 30.0% | |
| TTGATCGAACGATTAAGATA+TGG | + | chr2_4:17530862-17530881 | Msa0318520:CDS | 30.0% | |
| GATTAAGATATGGAATGTTG+AGG | + | chr2_4:17530872-17530891 | Msa0318520:CDS | 30.0% | |
| TACTTAATACTTCACTTTGG+TGG | - | chr2_4:17530926-17530945 | None:intergenic | 30.0% | |
| TTGATTGTTTACGCAAAGAA+AGG | + | chr2_4:17530946-17530965 | Msa0318520:CDS | 30.0% | |
| TGATTGTTTACGCAAAGAAA+GGG | + | chr2_4:17530947-17530966 | Msa0318520:CDS | 30.0% | |
| AACATCCGACATATACAATA+TGG | - | chr2_4:17531056-17531075 | None:intergenic | 30.0% | |
| ! | ATTTTCCAAAAACAGAGCAA+TGG | - | chr2_4:17531094-17531113 | None:intergenic | 30.0% |
| AACAAAACAACAGCATTCTA+AGG | - | chr2_4:17531293-17531312 | None:intergenic | 30.0% | |
| AATAATGAGGAATTCTTGTC+TGG | + | chr2_4:17531313-17531332 | Msa0318520:CDS | 30.0% | |
| ! | AGAAGCCTATTCATATTTTG+AGG | + | chr2_4:17531377-17531396 | Msa0318520:CDS | 30.0% |
| GCATTCCTCAAAATATGAAT+AGG | - | chr2_4:17531385-17531404 | None:intergenic | 30.0% | |
| CAGTATTTAAAGGTTTACCT+AGG | - | chr2_4:17531474-17531493 | None:intergenic | 30.0% | |
| ACAAATGACAGGTGTATTTA+CGG | - | chr2_4:17531609-17531628 | None:intergenic | 30.0% | |
| ACTACAAATACACAAATGAC+AGG | - | chr2_4:17531620-17531639 | None:intergenic | 30.0% | |
| TATCTTCACTATGCAGAAAA+TGG | + | chr2_4:17531684-17531703 | Msa0318520:intron | 30.0% | |
| !!! | GCAATGGTTTTGTTAGATTA+TGG | + | chr2_4:17531805-17531824 | Msa0318520:CDS | 30.0% |
| ATGAAGAGGTTTAATGTCTT+TGG | - | chr2_4:17531847-17531866 | None:intergenic | 30.0% | |
| AATAGTGATCTTGTAGAGAA+TGG | + | chr2_4:17532223-17532242 | Msa0318520:intron | 30.0% | |
| ! | GAGAGTATGATAACATAGAT+TGG | + | chr2_4:17532283-17532302 | Msa0318520:intron | 30.0% |
| CTCAAAAATTGTGTTGTAGA+AGG | - | chr2_4:17532340-17532359 | None:intergenic | 30.0% | |
| ATACAAAATCCCCTCAAAAT+GGG | - | chr2_4:17532367-17532386 | None:intergenic | 30.0% | |
| AATACAAAATCCCCTCAAAA+TGG | - | chr2_4:17532368-17532387 | None:intergenic | 30.0% | |
| !! | AACTAACTTCTAAAGCAGTT+TGG | - | chr2_4:17532579-17532598 | None:intergenic | 30.0% |
| ! | TCTAAGCAATTGAGTTTTTG+GGG | - | chr2_4:17532702-17532721 | None:intergenic | 30.0% |
| ! | CTCTAAGCAATTGAGTTTTT+GGG | - | chr2_4:17532703-17532722 | None:intergenic | 30.0% |
| ! | ACTCTAAGCAATTGAGTTTT+TGG | - | chr2_4:17532704-17532723 | None:intergenic | 30.0% |
| CACTTTAATCACTTAACATG+GGG | - | chr2_4:17532791-17532810 | None:intergenic | 30.0% | |
| ACAAGTCTACTTCGTATAAT+TGG | - | chr2_4:17532986-17533005 | None:intergenic | 30.0% | |
| AACTAACAACTTTGCATAAG+TGG | + | chr2_4:17533254-17533273 | Msa0318520:intron | 30.0% | |
| TCTCATGATGACAATTTAAG+TGG | - | chr2_4:17533400-17533419 | None:intergenic | 30.0% | |
| GCAATTAGTCAAAATTGAAG+AGG | - | chr2_4:17533444-17533463 | None:intergenic | 30.0% | |
| ! | GAATTTTGAATCATGATACG+AGG | + | chr2_4:17533556-17533575 | Msa0318520:three_prime_UTR | 30.0% |
| !! | GATAGTGATTTTGACGAAGA+TGG | + | chr2_4:17529486-17529505 | Msa0318520:CDS | 35.0% |
| GGAAGTTTAAAGATAGTGCT+AGG | + | chr2_4:17529598-17529617 | Msa0318520:CDS | 35.0% | |
| ! | TGATGATGATGATGAAGATG+AGG | + | chr2_4:17529647-17529666 | Msa0318520:CDS | 35.0% |
| ! | ATGATGATGAAGATGAGGAT+GGG | + | chr2_4:17529652-17529671 | Msa0318520:CDS | 35.0% |
| TCAGAAAAGCTATTGCTTCA+AGG | + | chr2_4:17529733-17529752 | Msa0318520:CDS | 35.0% | |
| ! | TGATTTCAATGTGACCCTTT+TGG | + | chr2_4:17529890-17529909 | Msa0318520:intron | 35.0% |
| !! | TTGATTTGGGTGTGTTATTC+AGG | + | chr2_4:17529983-17530002 | Msa0318520:intron | 35.0% |
| ! | TGATTTGGGTGTGTTATTCA+GGG | + | chr2_4:17529984-17530003 | Msa0318520:intron | 35.0% |
| ! | GCATAAACAATGTGTTACTG+CGG | + | chr2_4:17530047-17530066 | Msa0318520:CDS | 35.0% |
| TATCTGAGGATGATTCTAAG+GGG | + | chr2_4:17530076-17530095 | Msa0318520:CDS | 35.0% | |
| TTATACTCCTTTCCCTTGTT+TGG | + | chr2_4:17530505-17530524 | Msa0318520:intron | 35.0% | |
| CTACAGATTTGGCCATAAAT+AGG | - | chr2_4:17530700-17530719 | None:intergenic | 35.0% | |
| CTATTTATGGCCAAATCTGT+AGG | + | chr2_4:17530698-17530717 | Msa0318520:intron | 35.0% | |
| !! | TAGTTGGGACTTGTTATTGT+TGG | + | chr2_4:17530734-17530753 | Msa0318520:intron | 35.0% |
| ! | TTTTGTCCGTTGTCTTTTAC+AGG | + | chr2_4:17530764-17530783 | Msa0318520:intron | 35.0% |
| GAAAAGCCTGTAAAAGACAA+CGG | - | chr2_4:17530773-17530792 | None:intergenic | 35.0% | |
| !!! | TGTTTCTTCTCTGGCTTTTA+GGG | + | chr2_4:17530809-17530828 | Msa0318520:CDS | 35.0% |
| AAACGATCCAGAAAATAGCT+CGG | - | chr2_4:17530844-17530863 | None:intergenic | 35.0% | |
| ACCTACATGAATACTCTGTT+TGG | + | chr2_4:17530900-17530919 | Msa0318520:CDS | 35.0% | |
| !! | AAAGAAAGGGTATTATCTGC+TGG | + | chr2_4:17530960-17530979 | Msa0318520:CDS | 35.0% |
| TCGTAGTATGCAGTTGTTTA+AGG | + | chr2_4:17530989-17531008 | Msa0318520:CDS | 35.0% | |
| ! | AAGAAACAGCCTTTGAAGAT+AGG | - | chr2_4:17531154-17531173 | None:intergenic | 35.0% |
| !! | TATCTTCAAAGGCTGTTTCT+TGG | + | chr2_4:17531153-17531172 | Msa0318520:intron | 35.0% |
| !! | ATCTTCAAAGGCTGTTTCTT+GGG | + | chr2_4:17531154-17531173 | Msa0318520:intron | 35.0% |
| GAAAAAGTCTCATGAGGAAA+TGG | - | chr2_4:17531192-17531211 | None:intergenic | 35.0% | |
| CATTCAGAAAAAGTCTCATG+AGG | - | chr2_4:17531198-17531217 | None:intergenic | 35.0% | |
| GATAGTGAAATACTACCCAA+CGG | + | chr2_4:17531445-17531464 | Msa0318520:CDS | 35.0% | |
| ATTGCAGTTGAAAGTTTCAC+TGG | + | chr2_4:17531938-17531957 | Msa0318520:intron | 35.0% | |
| ! | GAATCTTTTGTATCACAGGT+TGG | + | chr2_4:17531969-17531988 | Msa0318520:intron | 35.0% |
| !!! | GGTTGGTTTTGTGAATTCTT+TGG | + | chr2_4:17531986-17532005 | Msa0318520:intron | 35.0% |
| ! | ATTGTGTTGTAGAAGGGTTT+TGG | - | chr2_4:17532333-17532352 | None:intergenic | 35.0% |
| !!! | TTTTGAGTTTCCCCATTTTG+AGG | + | chr2_4:17532353-17532372 | Msa0318520:intron | 35.0% |
| !! | TTTGAGTTTCCCCATTTTGA+GGG | + | chr2_4:17532354-17532373 | Msa0318520:intron | 35.0% |
| TACAAAATCCCCTCAAAATG+GGG | - | chr2_4:17532366-17532385 | None:intergenic | 35.0% | |
| TTAGAGTGCATTTGATAGAG+TGG | + | chr2_4:17532717-17532736 | Msa0318520:intron | 35.0% | |
| !!! | ATTTTGGGATACAATTGTGG+TGG | - | chr2_4:17532884-17532903 | None:intergenic | 35.0% |
| ACCACAATTGTATCCCAAAA+TGG | + | chr2_4:17532883-17532902 | Msa0318520:intron | 35.0% | |
| CCACAATTGTATCCCAAAAT+GGG | + | chr2_4:17532884-17532903 | Msa0318520:intron | 35.0% | |
| !! | ACGTTCATTAGTTTGTTCTC+TGG | + | chr2_4:17533182-17533201 | Msa0318520:intron | 35.0% |
| AATTGTCATCATGAGATGTG+AGG | + | chr2_4:17533404-17533423 | Msa0318520:exon | 35.0% | |
| AGATACAAAGGTTGCTGCTA+GGG | - | chr2_4:17529277-17529296 | None:intergenic | 40.0% | |
| GGTTAGGGTTTCAGAGATTT+GGG | - | chr2_4:17529338-17529357 | None:intergenic | 40.0% | |
| CGGGCATGATTGAATTGTTA+GGG | - | chr2_4:17529359-17529378 | None:intergenic | 40.0% | |
| CTCAGCATCTTGATCTTCAT+CGG | - | chr2_4:17529457-17529476 | None:intergenic | 40.0% | |
| !!! | GATGGTTTTGTTCCATCGAA+AGG | + | chr2_4:17529504-17529523 | Msa0318520:CDS | 40.0% |
| ! | GATGATGATGAAGATGAGGA+TGG | + | chr2_4:17529651-17529670 | Msa0318520:CDS | 40.0% |
| ! | TGATGATGAAGATGAGGATG+GGG | + | chr2_4:17529653-17529672 | Msa0318520:CDS | 40.0% |
| GCTATCGACCAAGATGATAA+AGG | + | chr2_4:17529686-17529705 | Msa0318520:CDS | 40.0% | |
| TTGCTGCTCCTTTATCATCT+TGG | - | chr2_4:17529697-17529716 | None:intergenic | 40.0% | |
| ! | TGATTTCAATGCGACCCTTT+TGG | + | chr2_4:17529831-17529850 | Msa0318520:intron | 40.0% |
| AGGGTTAAATTGGATGGTGA+TGG | + | chr2_4:17530003-17530022 | Msa0318520:intron | 40.0% | |
| !! | GTTAAATTGGATGGTGATGG+TGG | + | chr2_4:17530006-17530025 | Msa0318520:CDS | 40.0% |
| ! | TAAACAATGTGTTACTGCGG+TGG | + | chr2_4:17530050-17530069 | Msa0318520:CDS | 40.0% |
| !! | GGATGATTCTAAGGGGTTTT+CGG | + | chr2_4:17530083-17530102 | Msa0318520:CDS | 40.0% |
| !! | AAGATGGAAGCATTGTGCAA+TGG | + | chr2_4:17530112-17530131 | Msa0318520:CDS | 40.0% |
| !! | AGATGGAAGCATTGTGCAAT+GGG | + | chr2_4:17530113-17530132 | Msa0318520:CDS | 40.0% |
| ! | GGAAATGTGAGAGGTATAAG+TGG | + | chr2_4:17530148-17530167 | Msa0318520:CDS | 40.0% |
| ! | GTATAAGTGGCCCATTGATT+CGG | + | chr2_4:17530161-17530180 | Msa0318520:CDS | 40.0% |
| GACTTCAGAACCGAATCAAT+GGG | - | chr2_4:17530174-17530193 | None:intergenic | 40.0% | |
| AGACTTCAGAACCGAATCAA+TGG | - | chr2_4:17530175-17530194 | None:intergenic | 40.0% | |
| ! | TTTGACTTTGGCTGCAAGTT+CGG | + | chr2_4:17530245-17530264 | Msa0318520:CDS | 40.0% |
| !!! | TGTTGGATATTTTTTGGGGG+TGG | + | chr2_4:17530413-17530432 | Msa0318520:intron | 40.0% |
| GAACAGATTAGTACAGCTCT+AGG | + | chr2_4:17530435-17530454 | Msa0318520:intron | 40.0% | |
| AGTCCAATACCCTACAGATT+TGG | - | chr2_4:17530711-17530730 | None:intergenic | 40.0% | |
| !! | AGGGTATTGGACTGTTTAGT+TGG | + | chr2_4:17530718-17530737 | Msa0318520:intron | 40.0% |
| !! | GGGTATTGGACTGTTTAGTT+GGG | + | chr2_4:17530719-17530738 | Msa0318520:intron | 40.0% |
| ! | TGTCTTTTACAGGCTTTTCC+TGG | + | chr2_4:17530774-17530793 | Msa0318520:intron | 40.0% |
| CTAAAAGCCAGAGAAGAAAC+AGG | - | chr2_4:17530810-17530829 | None:intergenic | 40.0% | |
| !!! | CTGTTTCTTCTCTGGCTTTT+AGG | + | chr2_4:17530808-17530827 | Msa0318520:CDS | 40.0% |
| ! | GCCAAACAGAGTATTCATGT+AGG | - | chr2_4:17530904-17530923 | None:intergenic | 40.0% |
| ACAACTGCATACTACGATCA+CGG | - | chr2_4:17530986-17531005 | None:intergenic | 40.0% | |
| TCCAAAAACAGAGCAATGGT+GGG | - | chr2_4:17531090-17531109 | None:intergenic | 40.0% | |
| TTCCAAAAACAGAGCAATGG+TGG | - | chr2_4:17531091-17531110 | None:intergenic | 40.0% | |
| TGAGGAATTCTTGTCTGGTT+CGG | + | chr2_4:17531318-17531337 | Msa0318520:CDS | 40.0% | |
| ! | ATGATGGTAGCATTGAGCTT+TGG | + | chr2_4:17531341-17531360 | Msa0318520:CDS | 40.0% |
| ! | TGATGGTAGCATTGAGCTTT+GGG | + | chr2_4:17531342-17531361 | Msa0318520:CDS | 40.0% |
| TGACGAACAATGGTGATTCT+CGG | - | chr2_4:17531721-17531740 | None:intergenic | 40.0% | |
| ! | AAGAGTGTACTGACGAACAA+TGG | - | chr2_4:17531731-17531750 | None:intergenic | 40.0% |
| ATTGTTCGTCAGTACACTCT+TGG | + | chr2_4:17531730-17531749 | Msa0318520:CDS | 40.0% | |
| TTGTTCGTCAGTACACTCTT+GGG | + | chr2_4:17531731-17531750 | Msa0318520:CDS | 40.0% | |
| ACCTCTTCATAATGTACCGT+TGG | + | chr2_4:17531857-17531876 | Msa0318520:CDS | 40.0% | |
| ACCAACGGTACATTATGAAG+AGG | - | chr2_4:17531861-17531880 | None:intergenic | 40.0% | |
| ! | ATGTACCGTTGGTAAGTAGA+AGG | + | chr2_4:17531868-17531887 | Msa0318520:intron | 40.0% |
| GCTATCCTTCTACTTACCAA+CGG | - | chr2_4:17531876-17531895 | None:intergenic | 40.0% | |
| ACTGCAATTACAGCTAAGCA+TGG | - | chr2_4:17531926-17531945 | None:intergenic | 40.0% | |
| TCAGCAAAATTCCTAGTTGC+TGG | + | chr2_4:17532020-17532039 | Msa0318520:CDS | 40.0% | |
| AAATTCCTAGTTGCTGGAGT+TGG | + | chr2_4:17532026-17532045 | Msa0318520:CDS | 40.0% | |
| !!! | TGTTGTAGAAGGGTTTTGGA+GGG | - | chr2_4:17532329-17532348 | None:intergenic | 40.0% |
| ! | TTGAGTTTCCCCATTTTGAG+GGG | + | chr2_4:17532355-17532374 | Msa0318520:intron | 40.0% |
| ! | AAGAAGTGCAAGGGATGAAA+GGG | - | chr2_4:17532431-17532450 | None:intergenic | 40.0% |
| ! | AAAGAAGTGCAAGGGATGAA+AGG | - | chr2_4:17532432-17532451 | None:intergenic | 40.0% |
| TTTGCAAGTTTAGAGGGGAA+GGG | - | chr2_4:17532482-17532501 | None:intergenic | 40.0% | |
| CTCTGTTTGCAAGTTTAGAG+GGG | - | chr2_4:17532487-17532506 | None:intergenic | 40.0% | |
| GCTCTGTTTGCAAGTTTAGA+GGG | - | chr2_4:17532488-17532507 | None:intergenic | 40.0% | |
| !!! | CCCATTTTGGGATACAATTG+TGG | - | chr2_4:17532887-17532906 | None:intergenic | 40.0% |
| AAGCTTAGCAAGTCGAATGT+TGG | + | chr2_4:17533065-17533084 | Msa0318520:intron | 40.0% | |
| AGCTTAGCAAGTCGAATGTT+GGG | + | chr2_4:17533066-17533085 | Msa0318520:intron | 40.0% | |
| GGGTTACAGAAAGGATGTTT+AGG | + | chr2_4:17533092-17533111 | Msa0318520:intron | 40.0% | |
| ! | TCAAGTGAGACGATTGATTC+AGG | - | chr2_4:17533215-17533234 | None:intergenic | 40.0% |
| ! | TTTTTACAGGAACCTCGTCT+AGG | + | chr2_4:17533328-17533347 | Msa0318520:intron | 40.0% |
| AGAATACGTGAAGCTCGAAA+TGG | + | chr2_4:17533361-17533380 | Msa0318520:CDS | 40.0% | |
| CGTACGTTGAAAAAGACTTG+AGG | + | chr2_4:17533581-17533600 | Msa0318520:three_prime_UTR | 40.0% | |
| TCTATGACTATGAGTAAGCG+AGG | + | chr2_4:17533676-17533695 | Msa0318520:three_prime_UTR | 40.0% | |
| CAGATACAAAGGTTGCTGCT+AGG | - | chr2_4:17529278-17529297 | None:intergenic | 45.0% | |
| GGGTTAGGGTTTCAGAGATT+TGG | - | chr2_4:17529339-17529358 | None:intergenic | 45.0% | |
| GCGGGCATGATTGAATTGTT+AGG | - | chr2_4:17529360-17529379 | None:intergenic | 45.0% | |
| TTCTTGCGGTTGTTCTTTGC+GGG | - | chr2_4:17529378-17529397 | None:intergenic | 45.0% | |
| CTTCTTGCGGTTGTTCTTTG+CGG | - | chr2_4:17529379-17529398 | None:intergenic | 45.0% | |
| AGCATCTTGATCTTCATCGG+CGG | - | chr2_4:17529454-17529473 | None:intergenic | 45.0% | |
| TGTTCCATCGAAAGGTGATG+AGG | + | chr2_4:17529512-17529531 | Msa0318520:CDS | 45.0% | |
| TGTTCCTCATCACCTTTCGA+TGG | - | chr2_4:17529519-17529538 | None:intergenic | 45.0% | |
| ATCGAAAGGTGATGAGGAAC+AGG | + | chr2_4:17529518-17529537 | Msa0318520:CDS | 45.0% | |
| !! | GAGTAGCTGAGGAGTATTTG+AGG | + | chr2_4:17529577-17529596 | Msa0318520:CDS | 45.0% |
| AGATAGTGCTAGGAGAGAGA+AGG | + | chr2_4:17529608-17529627 | Msa0318520:CDS | 45.0% | |
| GATGATAAAGGAGCAGCAAG+AGG | + | chr2_4:17529698-17529717 | Msa0318520:CDS | 45.0% | |
| TGCAATGGGATGTTGAGAGT+GGG | + | chr2_4:17530127-17530146 | Msa0318520:CDS | 45.0% | |
| TTGAGAGTGGGAAATGTGAG+AGG | + | chr2_4:17530139-17530158 | Msa0318520:CDS | 45.0% | |
| !! | GATTCGGTTCTGAAGTCTCA+TGG | + | chr2_4:17530177-17530196 | Msa0318520:CDS | 45.0% |
| ! | TCTGAAGTCTCATGGCTTGA+AGG | + | chr2_4:17530185-17530204 | Msa0318520:CDS | 45.0% |
| TGCTTTGTAGCAGAACCTTG+AGG | - | chr2_4:17530213-17530232 | None:intergenic | 45.0% | |
| AAGTTCGGATGGTCGCTATT+TGG | + | chr2_4:17530260-17530279 | Msa0318520:CDS | 45.0% | |
| ATGGTCGCTATTTGGCTACT+GGG | + | chr2_4:17530268-17530287 | Msa0318520:CDS | 45.0% | |
| ATATATGGGATACGCGCACT+AGG | + | chr2_4:17530310-17530329 | Msa0318520:CDS | 45.0% | |
| TATATGGGATACGCGCACTA+GGG | + | chr2_4:17530311-17530330 | Msa0318520:CDS | 45.0% | |
| TGGCCAAATCTGTAGGGTAT+TGG | + | chr2_4:17530705-17530724 | Msa0318520:intron | 45.0% | |
| ! | TAGAGGTCCTGTTTCTTCTC+TGG | + | chr2_4:17530800-17530819 | Msa0318520:CDS | 45.0% |
| !!! | TCTTCTCTGGCTTTTAGGGA+AGG | + | chr2_4:17530813-17530832 | Msa0318520:CDS | 45.0% |
| !!! | GGAAGTACCGAGCTATTTTC+TGG | + | chr2_4:17530834-17530853 | Msa0318520:CDS | 45.0% |
| ! | TCCCACCATTGCTCTGTTTT+TGG | + | chr2_4:17531086-17531105 | Msa0318520:intron | 45.0% |
| ! | CAGCATTCTAAGGAAGATGC+AGG | - | chr2_4:17531283-17531302 | None:intergenic | 45.0% |
| !! | TTCTTGTCTGGTTCGGATGA+TGG | + | chr2_4:17531325-17531344 | Msa0318520:CDS | 45.0% |
| ! | GATGGTAGCATTGAGCTTTG+GGG | + | chr2_4:17531343-17531362 | Msa0318520:CDS | 45.0% |
| ATACTACCCAACGGTAACCT+AGG | + | chr2_4:17531454-17531473 | Msa0318520:CDS | 45.0% | |
| GGTTTACCTAGGTTACCGTT+GGG | - | chr2_4:17531463-17531482 | None:intergenic | 45.0% | |
| AGGTTTACCTAGGTTACCGT+TGG | - | chr2_4:17531464-17531483 | None:intergenic | 45.0% | |
| AACAATGGTGATTCTCGGGA+TGG | - | chr2_4:17531716-17531735 | None:intergenic | 45.0% | |
| GACGAACAATGGTGATTCTC+GGG | - | chr2_4:17531720-17531739 | None:intergenic | 45.0% | |
| AAGGTCACTGTTCCTACAGA+CGG | - | chr2_4:17531769-17531788 | None:intergenic | 45.0% | |
| !! | GTGTTGTAGAAGGGTTTTGG+AGG | - | chr2_4:17532330-17532349 | None:intergenic | 45.0% |
| ! | GCAAGGGATGAAAGGGTTTT+GGG | - | chr2_4:17532424-17532443 | None:intergenic | 45.0% |
| ! | TGCAAGGGATGAAAGGGTTT+TGG | - | chr2_4:17532425-17532444 | None:intergenic | 45.0% |
| GTTTGCAAGTTTAGAGGGGA+AGG | - | chr2_4:17532483-17532502 | None:intergenic | 45.0% | |
| GGCTCTGTTTGCAAGTTTAG+AGG | - | chr2_4:17532489-17532508 | None:intergenic | 45.0% | |
| TTAAGGGTCTCGGCTAGATT+TGG | + | chr2_4:17532826-17532845 | Msa0318520:intron | 45.0% | |
| CTCGCATTCAGTTAGGTTTC+AGG | + | chr2_4:17532854-17532873 | Msa0318520:intron | 45.0% | |
| TTAGCAAGTCGAATGTTGGG+AGG | + | chr2_4:17533069-17533088 | Msa0318520:intron | 45.0% | |
| TAGCAAGTCGAATGTTGGGA+GGG | + | chr2_4:17533070-17533089 | Msa0318520:intron | 45.0% | |
| ACTATGAGTAAGCGAGGCTT+TGG | + | chr2_4:17533682-17533701 | Msa0318520:three_prime_UTR | 45.0% | |
| GGTCGCGTGAATTCTTCTTG+CGG | - | chr2_4:17529392-17529411 | None:intergenic | 50.0% | |
| !! | GCGACCCATTTTTCGACGAT+GGG | + | chr2_4:17529406-17529425 | Msa0318520:CDS | 50.0% |
| TGGGCCCATCGTCGAAAAAT+GGG | - | chr2_4:17529413-17529432 | None:intergenic | 50.0% | |
| TGAGGAACAGGAGTCTGAAG+AGG | + | chr2_4:17529530-17529549 | Msa0318520:CDS | 50.0% | |
| AGGAAACCACAGCTGAAGCT+AGG | + | chr2_4:17529550-17529569 | Msa0318520:CDS | 50.0% | |
| TCTCTTCCTAGCTTCAGCTG+TGG | - | chr2_4:17529559-17529578 | None:intergenic | 50.0% | |
| AGCTAGGAAGAGAGTAGCTG+AGG | + | chr2_4:17529566-17529585 | Msa0318520:CDS | 50.0% | |
| !! | TACTGCGGTGGCTTTATCTG+AGG | + | chr2_4:17530062-17530081 | Msa0318520:CDS | 50.0% |
| ! | GGGTTTTCGGCTTCGAAAGA+TGG | + | chr2_4:17530096-17530115 | Msa0318520:CDS | 50.0% |
| GTGCAATGGGATGTTGAGAG+TGG | + | chr2_4:17530126-17530145 | Msa0318520:CDS | 50.0% | |
| CATGGCTTGAAGGATCCTCA+AGG | + | chr2_4:17530195-17530214 | Msa0318520:CDS | 50.0% | |
| ACTTTGGCTGCAAGTTCGGA+TGG | + | chr2_4:17530249-17530268 | Msa0318520:CDS | 50.0% | |
| GATGGTCGCTATTTGGCTAC+TGG | + | chr2_4:17530267-17530286 | Msa0318520:CDS | 50.0% | |
| TGGTCGCTATTTGGCTACTG+GGG | + | chr2_4:17530269-17530288 | Msa0318520:CDS | 50.0% | |
| ! | CAGGCTTTTCCTGGTCATAG+AGG | + | chr2_4:17530783-17530802 | Msa0318520:intron | 50.0% |
| GAAACAGGACCTCTATGACC+AGG | - | chr2_4:17530795-17530814 | None:intergenic | 50.0% | |
| AATGGTGATTCTCGGGATGG+TGG | - | chr2_4:17531713-17531732 | None:intergenic | 50.0% | |
| !! | TTTCTCTTTGGCTCTGCCTG+CGG | + | chr2_4:17532121-17532140 | Msa0318520:intron | 50.0% |
| !!! | GGATGAAAGGGTTTTGGGAG+GGG | - | chr2_4:17532419-17532438 | None:intergenic | 50.0% |
| !!! | GGGATGAAAGGGTTTTGGGA+GGG | - | chr2_4:17532420-17532439 | None:intergenic | 50.0% |
| !!! | AGGGATGAAAGGGTTTTGGG+AGG | - | chr2_4:17532421-17532440 | None:intergenic | 50.0% |
| AGTTTAGAGGGGAAGGGAGA+GGG | - | chr2_4:17532476-17532495 | None:intergenic | 50.0% | |
| AAGTTTAGAGGGGAAGGGAG+AGG | - | chr2_4:17532477-17532496 | None:intergenic | 50.0% | |
| ! | GCTGTAGCGATGCCCATTTT+GGG | - | chr2_4:17532899-17532918 | None:intergenic | 50.0% |
| ! | TGCTGTAGCGATGCCCATTT+TGG | - | chr2_4:17532900-17532919 | None:intergenic | 50.0% |
| AGCAAGTCGAATGTTGGGAG+GGG | + | chr2_4:17533071-17533090 | Msa0318520:intron | 50.0% | |
| TACAGGAACCTCGTCTAGGA+AGG | + | chr2_4:17533332-17533351 | Msa0318520:intron | 50.0% | |
| !! | CGCGACCCATTTTTCGACGA+TGG | + | chr2_4:17529405-17529424 | Msa0318520:CDS | 55.0% |
| GTGGGCCCATCGTCGAAAAA+TGG | - | chr2_4:17529414-17529433 | None:intergenic | 55.0% | |
| ATGAAGATGAGGATGGGGCG+AGG | + | chr2_4:17529658-17529677 | Msa0318520:CDS | 55.0% | |
| TGAAGATGAGGATGGGGCGA+GGG | + | chr2_4:17529659-17529678 | Msa0318520:CDS | 55.0% | |
| AAGGAGCAGCAAGAGGAGAG+TGG | + | chr2_4:17529705-17529724 | Msa0318520:CDS | 55.0% | |
| GGTCGCTATTTGGCTACTGG+GGG | + | chr2_4:17530270-17530289 | Msa0318520:CDS | 55.0% | |
| GTCGCTATTTGGCTACTGGG+GGG | + | chr2_4:17530271-17530290 | Msa0318520:CDS | 55.0% | |
| TCAGTGCAGTGACCGTCTGT+AGG | + | chr2_4:17531754-17531773 | Msa0318520:CDS | 55.0% | |
| AACAGTGACCTTGCCGCATC+TGG | + | chr2_4:17531777-17531796 | Msa0318520:CDS | 55.0% | |
| CCTGACCAACTCCAGCAACT+AGG | - | chr2_4:17532034-17532053 | None:intergenic | 55.0% | |
| ! | CCTAGTTGCTGGAGTTGGTC+AGG | + | chr2_4:17532031-17532050 | Msa0318520:CDS | 55.0% |
| !! | TTCTCTTTGGCTCTGCCTGC+GGG | + | chr2_4:17532122-17532141 | Msa0318520:intron | 55.0% |
| TTTGGGGGGATGGGAGTTGA+GGG | + | chr2_4:17532170-17532189 | Msa0318520:intron | 55.0% | |
| !! | TTGGGAGGGGATGGCTTTGA+GGG | - | chr2_4:17532406-17532425 | None:intergenic | 55.0% |
| ! | TTTGGGAGGGGATGGCTTTG+AGG | - | chr2_4:17532407-17532426 | None:intergenic | 55.0% |
| !!! | GAAAGGGTTTTGGGAGGGGA+TGG | - | chr2_4:17532415-17532434 | None:intergenic | 55.0% |
| GGCTGCACTCGCATTCAGTT+AGG | + | chr2_4:17532847-17532866 | Msa0318520:intron | 55.0% | |
| GCAAGTCGAATGTTGGGAGG+GGG | + | chr2_4:17533072-17533091 | Msa0318520:intron | 55.0% | |
| GTTGGGAGGGGGTTACAGAA+AGG | + | chr2_4:17533083-17533102 | Msa0318520:intron | 55.0% | |
| AGGAACCTCGTCTAGGAAGG+TGG | + | chr2_4:17533335-17533354 | Msa0318520:intron | 55.0% | |
| GGAACCTCGTCTAGGAAGGT+GGG | + | chr2_4:17533336-17533355 | Msa0318520:intron | 55.0% | |
| GAACCTCGTCTAGGAAGGTG+GGG | + | chr2_4:17533337-17533356 | Msa0318520:CDS | 55.0% | |
| GCTACTCTGCGGCGTTTGGT+GGG | - | chr2_4:17529432-17529451 | None:intergenic | 60.0% | |
| CTTCATCGGCGGCTACTCTG+CGG | - | chr2_4:17529443-17529462 | None:intergenic | 60.0% | |
| !! | GCGCACTAGGGAGCATCTTC+AGG | + | chr2_4:17530323-17530342 | Msa0318520:CDS | 60.0% |
| TGACCTTGCCGCATCTGGTG+CGG | + | chr2_4:17531782-17531801 | Msa0318520:CDS | 60.0% | |
| ACCATTGCCCGCACCAGATG+CGG | - | chr2_4:17531793-17531812 | None:intergenic | 60.0% | |
| !! | TTTGGCTCTGCCTGCGGGTT+TGG | + | chr2_4:17532127-17532146 | Msa0318520:intron | 60.0% |
| GAAGGGGAGGGGAAGGCTTT+GGG | + | chr2_4:17532153-17532172 | Msa0318520:intron | 60.0% | |
| AAGGGGAGGGGAAGGCTTTG+GGG | + | chr2_4:17532154-17532173 | Msa0318520:intron | 60.0% | |
| ! | CTTTGGGGGGATGGGAGTTG+AGG | + | chr2_4:17532169-17532188 | Msa0318520:intron | 60.0% |
| !! | TGGGAGGGGATGGCTTTGAG+GGG | - | chr2_4:17532405-17532424 | None:intergenic | 60.0% |
| GAAGGGAGAGGGAGGGCTTT+GGG | - | chr2_4:17532465-17532484 | None:intergenic | 60.0% | |
| TAGAGGGGAAGGGAGAGGGA+GGG | - | chr2_4:17532472-17532491 | None:intergenic | 60.0% | |
| TTAGAGGGGAAGGGAGAGGG+AGG | - | chr2_4:17532473-17532492 | None:intergenic | 60.0% | |
| CTTCCCCACCTTCCTAGACG+AGG | - | chr2_4:17533343-17533362 | None:intergenic | 60.0% | |
| GGCTACTCTGCGGCGTTTGG+TGG | - | chr2_4:17529433-17529452 | None:intergenic | 65.0% | |
| GACCTTGCCGCATCTGGTGC+GGG | + | chr2_4:17531783-17531802 | Msa0318520:CDS | 65.0% | |
| GCTCTGCCTGCGGGTTTGGA+GGG | + | chr2_4:17532131-17532150 | Msa0318520:intron | 65.0% | |
| TGCCTGCGGGTTTGGAGGGA+AGG | + | chr2_4:17532135-17532154 | Msa0318520:intron | 65.0% | |
| GCCTGCGGGTTTGGAGGGAA+GGG | + | chr2_4:17532136-17532155 | Msa0318520:intron | 65.0% | |
| CCTGCGGGTTTGGAGGGAAG+GGG | + | chr2_4:17532137-17532156 | Msa0318520:intron | 65.0% | |
| CGGGTTTGGAGGGAAGGGGA+GGG | + | chr2_4:17532141-17532160 | Msa0318520:intron | 65.0% | |
| GGGTTTGGAGGGAAGGGGAG+GGG | + | chr2_4:17532142-17532161 | Msa0318520:intron | 65.0% | |
| TTGGAGGGAAGGGGAGGGGA+AGG | + | chr2_4:17532146-17532165 | Msa0318520:intron | 65.0% | |
| GGAAGGGGAGGGGAAGGCTT+TGG | + | chr2_4:17532152-17532171 | Msa0318520:intron | 65.0% | |
| ! | AGGGGAGGGGAAGGCTTTGG+GGG | + | chr2_4:17532155-17532174 | Msa0318520:intron | 65.0% |
| !! | AGGGGAAGGCTTTGGGGGGA+TGG | + | chr2_4:17532160-17532179 | Msa0318520:intron | 65.0% |
| !! | GGGGAAGGCTTTGGGGGGAT+GGG | + | chr2_4:17532161-17532180 | Msa0318520:intron | 65.0% |
| GGAAGGGAGAGGGAGGGCTT+TGG | - | chr2_4:17532466-17532485 | None:intergenic | 65.0% | |
| GGCGGCTACTCTGCGGCGTT+TGG | - | chr2_4:17529436-17529455 | None:intergenic | 70.0% | |
| TGCCCGCACCAGATGCGGCA+AGG | - | chr2_4:17531788-17531807 | None:intergenic | 70.0% | |
| GCCGCATCTGGTGCGGGCAA+TGG | + | chr2_4:17531789-17531808 | Msa0318520:CDS | 70.0% | |
| GGCTCTGCCTGCGGGTTTGG+AGG | + | chr2_4:17532130-17532149 | Msa0318520:intron | 70.0% | |
| CCCCTTCCCTCCAAACCCGC+AGG | - | chr2_4:17532140-17532159 | None:intergenic | 70.0% | |
| GCGGGTTTGGAGGGAAGGGG+AGG | + | chr2_4:17532140-17532159 | Msa0318520:intron | 70.0% | |
| !! | GGGGAGGGGAAGGCTTTGGG+GGG | + | chr2_4:17532156-17532175 | Msa0318520:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 17529268 | 17533714 | 17529268 | ID=Msa0318520;Name=Msa0318520 |
| chr2_4 | mRNA | 17529268 | 17533714 | 17529268 | ID=Msa0318520-mRNA-1;Parent=Msa0318520;Name=Msa0318520-mRNA-1;_AED=0.06;_eAED=0.06;_QI=104|1|1|1|1|1|7|297|500 |
| chr2_4 | exon | 17529268 | 17529754 | 17529268 | ID=Msa0318520-mRNA-1:exon:6475;Parent=Msa0318520-mRNA-1 |
| chr2_4 | exon | 17530005 | 17530344 | 17530005 | ID=Msa0318520-mRNA-1:exon:6476;Parent=Msa0318520-mRNA-1 |
| chr2_4 | exon | 17530786 | 17531010 | 17530786 | ID=Msa0318520-mRNA-1:exon:6477;Parent=Msa0318520-mRNA-1 |
| chr2_4 | exon | 17531247 | 17531475 | 17531247 | ID=Msa0318520-mRNA-1:exon:6478;Parent=Msa0318520-mRNA-1 |
| chr2_4 | exon | 17531700 | 17531878 | 17531700 | ID=Msa0318520-mRNA-1:exon:6479;Parent=Msa0318520-mRNA-1 |
| chr2_4 | exon | 17531987 | 17532052 | 17531987 | ID=Msa0318520-mRNA-1:exon:6480;Parent=Msa0318520-mRNA-1 |
| chr2_4 | exon | 17533337 | 17533714 | 17533337 | ID=Msa0318520-mRNA-1:exon:6481;Parent=Msa0318520-mRNA-1 |
| chr2_4 | five_prime_UTR | 17529268 | 17529371 | 17529268 | ID=Msa0318520-mRNA-1:five_prime_utr;Parent=Msa0318520-mRNA-1 |
| chr2_4 | CDS | 17529372 | 17529754 | 17529372 | ID=Msa0318520-mRNA-1:cds;Parent=Msa0318520-mRNA-1 |
| chr2_4 | CDS | 17530005 | 17530344 | 17530005 | ID=Msa0318520-mRNA-1:cds;Parent=Msa0318520-mRNA-1 |
| chr2_4 | CDS | 17530786 | 17531010 | 17530786 | ID=Msa0318520-mRNA-1:cds;Parent=Msa0318520-mRNA-1 |
| chr2_4 | CDS | 17531247 | 17531475 | 17531247 | ID=Msa0318520-mRNA-1:cds;Parent=Msa0318520-mRNA-1 |
| chr2_4 | CDS | 17531700 | 17531878 | 17531700 | ID=Msa0318520-mRNA-1:cds;Parent=Msa0318520-mRNA-1 |
| chr2_4 | CDS | 17531987 | 17532052 | 17531987 | ID=Msa0318520-mRNA-1:cds;Parent=Msa0318520-mRNA-1 |
| chr2_4 | CDS | 17533337 | 17533417 | 17533337 | ID=Msa0318520-mRNA-1:cds;Parent=Msa0318520-mRNA-1 |
| chr2_4 | three_prime_UTR | 17533418 | 17533714 | 17533418 | ID=Msa0318520-mRNA-1:three_prime_utr;Parent=Msa0318520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
