AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0319930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0319930 MtrunA17_Chr2g0294711 96.940 915 28 0 1 915 1 915 0.0 1865
Msa0319930 MtrunA17_Chr4g0068161 70.793 921 256 3 1 909 1 920 0.0 1335
Msa0319930 MtrunA17_Chr8g0377501 36.395 588 316 17 356 910 406 968 2.87e-89 305
Msa0319930 MtrunA17_Chr8g0377501 48.344 151 76 1 24 172 13 163 1.14e-39 159
Msa0319930 MtrunA17_Chr8g0382191 31.596 614 385 12 299 886 433 1037 9.25e-86 297
Msa0319930 MtrunA17_Chr8g0382191 47.953 171 80 2 25 186 9 179 2.29e-42 167
Msa0319930 MtrunA17_Chr2g0279141 32.039 618 369 15 301 886 395 993 1.20e-82 288
Msa0319930 MtrunA17_Chr2g0279141 54.861 144 63 2 25 168 13 154 2.28e-39 158
Msa0319930 MtrunA17_Chr4g0050401 32.379 559 337 12 356 886 436 981 1.91e-79 278
Msa0319930 MtrunA17_Chr4g0050401 55.039 129 58 0 25 153 13 141 2.07e-38 155
Msa0319930 MtrunA17_Chr3g0122351 32.828 594 341 16 340 908 375 935 2.33e-72 257
Msa0319930 MtrunA17_Chr3g0122351 54.135 133 59 1 26 156 8 140 1.54e-39 158
Msa0319930 MtrunA17_Chr8g0382181 37.815 119 73 1 67 184 8 126 4.06e-21 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0319930 AT3G16940.1 56.902 891 322 12 9 896 7 838 0.0 977
Msa0319930 AT3G16940.3 56.502 869 316 12 31 896 2 811 0.0 942
Msa0319930 AT3G16940.2 55.344 786 294 11 9 791 7 738 0.0 828
Msa0319930 AT5G09410.1 31.325 996 534 28 25 910 16 971 2.39e-132 422
Msa0319930 AT5G09410.3 30.168 1011 544 27 25 910 75 1048 6.25e-123 399
Msa0319930 AT2G22300.3 34.416 616 350 15 299 886 331 920 3.56e-88 302
Msa0319930 AT2G22300.3 66.265 83 28 0 71 153 1 83 8.21e-29 124
Msa0319930 AT2G22300.2 34.253 616 351 15 299 886 389 978 1.80e-87 301
Msa0319930 AT2G22300.2 58.571 140 58 0 14 153 2 141 1.27e-45 178
Msa0319930 AT2G22300.1 34.253 616 351 15 299 886 389 978 1.80e-87 301
Msa0319930 AT2G22300.1 58.571 140 58 0 14 153 2 141 1.27e-45 178
Msa0319930 AT5G64220.1 31.392 618 349 13 302 886 423 998 4.91e-83 289
Msa0319930 AT5G64220.1 50.276 181 78 2 25 193 13 193 8.72e-45 176
Msa0319930 AT5G64220.2 31.392 618 349 13 302 886 423 998 4.91e-83 289
Msa0319930 AT5G64220.2 50.276 181 78 2 25 193 13 193 8.72e-45 176
Msa0319930 AT5G09410.4 30.448 647 381 15 302 910 253 868 1.11e-80 280
Msa0319930 AT5G09410.2 30.448 647 381 15 302 910 374 989 6.19e-80 280
Msa0319930 AT5G09410.2 48.555 173 72 2 25 183 16 185 7.40e-42 166
Msa0319930 AT1G67310.1 35.121 578 327 15 357 908 444 999 1.17e-70 253
Msa0319930 AT1G67310.1 46.324 136 73 0 21 156 32 167 4.32e-35 145

Find 207 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATAAATTTACATGAATT+TGG 0.133181 2_4:+20016396 None:intergenic
CTGGATTTCCGCGACAAATT+TGG 0.196851 2_4:-20011821 Msa0319930:CDS
GGACTCGCATTTGAATTTAA+TGG 0.227685 2_4:+20013752 None:intergenic
AAAGAAAAGAAAGTAGAAAA+AGG 0.231800 2_4:-20016506 Msa0319930:five_prime_UTR
CATGAAGTGTATAAAACTTT+TGG 0.232830 2_4:+20012060 None:intergenic
AAATTAACAACTTGGCTAAT+AGG 0.235743 2_4:+20012280 None:intergenic
AATGACACTCTGTTCTTCTT+TGG 0.245036 2_4:+20016475 None:intergenic
CTATCAGAAGACTTGGATTC+TGG 0.246247 2_4:-20013701 Msa0319930:CDS
AGATGTTTGGTAGATGTTTC+TGG 0.247865 2_4:-20009690 Msa0319930:three_prime_UTR
CAAACTCAGGGAATGGCTTT+TGG 0.255377 2_4:-20011966 Msa0319930:CDS
AGTTGGATCTGTCACCAAAT+TGG 0.280566 2_4:+20011119 None:intergenic
GCCACAGACACACATTATAT+TGG 0.281294 2_4:+20012411 None:intergenic
GTAAGGTTCTCAGCATTTAC+TGG 0.282291 2_4:+20010937 None:intergenic
CTGGATCATTTGTAGTGGTT+TGG 0.306285 2_4:+20010956 None:intergenic
GGCAATATCGTAAAATTCTA+TGG 0.307153 2_4:-20010498 Msa0319930:CDS
AATTTGTCTTAGGGAGAATA+TGG 0.308955 2_4:-20011172 Msa0319930:intron
TTCTTGCAGGTCCTAGTAAC+TGG 0.310886 2_4:-20012469 Msa0319930:intron
ATATTTGTAATTGCTGAGTA+TGG 0.314431 2_4:+20015325 None:intergenic
CAACTTGGCTAATAGGCTTA+TGG 0.317255 2_4:+20012287 None:intergenic
ATGAGCTTAATACACTTGAT+TGG 0.321779 2_4:-20013303 Msa0319930:CDS
ATTCTAACTCCGCCAGAGTC+TGG 0.324528 2_4:-20012926 Msa0319930:CDS
CTTCATTGGGCAGCATATAA+TGG 0.325901 2_4:-20011788 Msa0319930:CDS
TCCATCACCAGTGATGAAAA+TGG 0.327471 2_4:+20012686 None:intergenic
TTTGGAAAGAAATAATGTTT+TGG 0.330089 2_4:+20012078 None:intergenic
AGGTTGGAGTTTACCGATGC+TGG 0.332809 2_4:-20012360 Msa0319930:CDS
ATTGCTTTAGTATCTTGAAA+TGG 0.335546 2_4:-20009741 Msa0319930:three_prime_UTR
GGTGCAGTTGTATCAGAAAT+AGG 0.337957 2_4:+20013731 None:intergenic
TCGATGCAGGCTGCATTTAG+AGG 0.340503 2_4:-20010535 Msa0319930:intron
TCTAATAATCACATCAAATA+AGG 0.341301 2_4:+20009634 None:intergenic
TCACTGAGGTGGCCCCTTCA+TGG 0.345003 2_4:-20012625 Msa0319930:CDS
AATACCCCTACTATACAAAA+TGG 0.347537 2_4:-20013256 Msa0319930:CDS
ATCTGGCGTGCTTCCTCCTC+TGG 0.351586 2_4:+20010784 None:intergenic
CACGCATACAAGCAGCGTTT+AGG 0.356504 2_4:-20010852 Msa0319930:CDS
TTGGATGGACAGCTCTTCAT+TGG 0.360303 2_4:-20011802 Msa0319930:CDS
TTGCAAAGTCAGAATAGCTT+TGG 0.360951 2_4:-20012797 Msa0319930:CDS
TTACATAAGTCTAAAGGAAT+TGG 0.362651 2_4:+20009862 None:intergenic
TCCGAAAAGATGGGCACAAC+TGG 0.365542 2_4:-20014796 Msa0319930:CDS
GTTGGATCTGTCACCAAATT+GGG 0.373235 2_4:+20011120 None:intergenic
ACGTCAGGCTATTAGAATTC+AGG 0.376431 2_4:-20010635 Msa0319930:intron
TTTGATCGTTAACACTTTCT+GGG 0.382927 2_4:+20012879 None:intergenic
TGTTCCTGTAGAAATTGTTC+AGG 0.386765 2_4:-20012380 Msa0319930:CDS
ACGCATACAAGCAGCGTTTA+GGG 0.390302 2_4:-20010851 Msa0319930:CDS
TTTGAATTTAATGGTGTAAC+GGG 0.392292 2_4:+20013761 None:intergenic
TCATGCTTAATTAAGATGTT+TGG 0.396025 2_4:-20009703 Msa0319930:three_prime_UTR
GCTTTGTTCGAAGATGTTAT+TGG 0.400349 2_4:-20014460 Msa0319930:CDS
TTGCTTTAGTATCTTGAAAT+GGG 0.403911 2_4:-20009740 Msa0319930:three_prime_UTR
TCCAGTACAGATTCCGTTCA+TGG 0.405822 2_4:-20010687 Msa0319930:CDS
CACTGAGGTGGCCCCTTCAT+GGG 0.406933 2_4:-20012624 Msa0319930:CDS
GTGATATGAAATACTTGTTC+CGG 0.408155 2_4:+20012644 None:intergenic
TCCTCAGAAATTCCTACATA+TGG 0.408373 2_4:-20012950 Msa0319930:CDS
TTAGCTCAATTTGCACACTA+TGG 0.408461 2_4:+20009776 None:intergenic
AGAGGACCAAGTGTACTTAA+AGG 0.409759 2_4:-20010914 Msa0319930:CDS
TAATCAACAATCTTCTCTTC+CGG 0.411008 2_4:-20012663 Msa0319930:CDS
TATGAAGTTTGTTGTGTTTG+TGG 0.411847 2_4:-20016224 Msa0319930:five_prime_UTR
TTCAATGACATGAGCTTAGC+TGG 0.412581 2_4:-20010997 Msa0319930:CDS
GAACAAAGCCTGGGTTATCT+TGG 0.413976 2_4:+20014474 None:intergenic
CATGGATTCCATACCTTAAG+AGG 0.415407 2_4:-20016118 Msa0319930:intron
CGTAAAATTCTATGGTCTGT+TGG 0.422461 2_4:-20010490 Msa0319930:CDS
TGAGCTTAATACACTTGATT+GGG 0.422562 2_4:-20013302 Msa0319930:CDS
AGTACACTTGGTCCTCTGTA+AGG 0.423640 2_4:+20010920 None:intergenic
TTGTGGAGCAAAGCCCAATT+TGG 0.424453 2_4:-20011133 Msa0319930:CDS
CTGCTGCCTCGGCTGTTGTC+CGG 0.435310 2_4:+20010875 None:intergenic
TAACATCTTCGAACAAAGCC+TGG 0.436408 2_4:+20014464 None:intergenic
ATGCATTGTACTACCTCTTA+AGG 0.439476 2_4:+20016105 None:intergenic
CTTAGGAACTTCCGAAAAGA+TGG 0.440286 2_4:-20014806 Msa0319930:CDS
GCACGATCCGGCTGCTTCAA+TGG 0.440850 2_4:-20012236 Msa0319930:CDS
AGGATACATTGGCAGCTTAC+CGG 0.443232 2_4:-20010894 Msa0319930:CDS
TGGGTATTGCCGCATTCTCC+TGG 0.445050 2_4:-20012340 Msa0319930:CDS
GCAGCCGGATCGTGCAAAAT+CGG 0.445245 2_4:+20012244 None:intergenic
AGTACAGCCACCAGGGTATT+CGG 0.445573 2_4:+20011095 None:intergenic
TTGAATTTCGTCTTCAAATG+AGG 0.446176 2_4:-20012195 Msa0319930:CDS
CCGTGGGCTTGAGGTGAATC+CGG 0.447115 2_4:-20010419 Msa0319930:CDS
AAGCGCAACAAGAGTATAGC+AGG 0.448397 2_4:-20010267 Msa0319930:CDS
CACACAAATGAATTACACTT+TGG 0.449905 2_4:+20011897 None:intergenic
GTTACATTACATAAGTCTAA+AGG 0.452727 2_4:+20009856 None:intergenic
TCATCTTTCATGTCTTCGTC+CGG 0.452729 2_4:+20010400 None:intergenic
TTCGTGGTCAGGCTTGTCAC+TGG 0.453462 2_4:-20011840 Msa0319930:CDS
TTCTAACTCCGCCAGAGTCT+GGG 0.453587 2_4:-20012925 Msa0319930:CDS
AACTTCACAGGACAACTTGT+TGG 0.453778 2_4:-20016151 Msa0319930:CDS
AATTCATTTGTGTGCAATGT+TGG 0.456072 2_4:-20011888 Msa0319930:CDS
TTAGTCTCTTTCAGTGCAGT+AGG 0.457802 2_4:+20012112 None:intergenic
GTTTCTCCACATGCGACGTC+AGG 0.466290 2_4:-20010650 Msa0319930:CDS
AGAACATGGTGTGTAAGATA+TGG 0.466489 2_4:+20012757 None:intergenic
AAGAATCATTCTATGACTCT+TGG 0.472734 2_4:-20012857 Msa0319930:CDS
TTATCTTTCAGAAAAGTGTC+TGG 0.473332 2_4:-20011028 Msa0319930:CDS
CTTGTTGGTTCAGAAATACA+TGG 0.475176 2_4:-20016136 Msa0319930:CDS
GTGCAATGTTGGGATATACT+TGG 0.476598 2_4:-20011877 Msa0319930:CDS
TTGTATGCGTGCTGCTGCCT+CGG 0.476655 2_4:+20010864 None:intergenic
TATTTGACCGCAAGATGCTT+AGG 0.477000 2_4:-20014823 Msa0319930:CDS
TCCATGAACGGAATCTGTAC+TGG 0.477269 2_4:+20010686 None:intergenic
CAATGGAAGAGACATACAAC+TGG 0.483109 2_4:-20012219 Msa0319930:CDS
CCACCAGGGTATTCGGTAGT+TGG 0.483552 2_4:+20011102 None:intergenic
CGCTTTCTTAGAACGGAACA+TGG 0.484609 2_4:+20010285 None:intergenic
TGTGCCATCATCACAGCCTA+TGG 0.485072 2_4:+20016178 None:intergenic
AAATAGAGATTCACGAATCC+AGG 0.491400 2_4:+20012322 None:intergenic
CCTGTAGAAATTGTTCAGGT+TGG 0.492274 2_4:-20012376 Msa0319930:CDS
GAGAAAACATCAAGGGTCTT+CGG 0.497702 2_4:+20012148 None:intergenic
CCTGGATGTTGGCGAAACCT+TGG 0.500012 2_4:-20015390 Msa0319930:CDS
GAAGAGGACTTCTTTAAGAC+TGG 0.502934 2_4:-20010358 Msa0319930:CDS
TTACATGAATTTGGAGAAGA+GGG 0.504725 2_4:+20016405 None:intergenic
TTGTACTACCTCTTAAGGTA+TGG 0.505965 2_4:+20016110 None:intergenic
GATACTAAAGCAATTTGAAA+GGG 0.507532 2_4:+20009750 None:intergenic
GGTTGGAGTTTACCGATGCT+GGG 0.508816 2_4:-20012359 Msa0319930:CDS
AAGCAATGGCAGCCGCTGCT+CGG 0.509734 2_4:-20010711 Msa0319930:CDS
TGGATGGACAGCTCTTCATT+GGG 0.509818 2_4:-20011801 Msa0319930:CDS
ATTCATTTGTGTGCAATGTT+GGG 0.510037 2_4:-20011887 Msa0319930:CDS
AGAGAAAATATCCAGTTACT+AGG 0.515300 2_4:+20012458 None:intergenic
AAAAGGTTTCCGTGGGCTTG+AGG 0.516403 2_4:-20010428 Msa0319930:CDS
ACATTACTGCTCCCAGACTC+TGG 0.516774 2_4:+20012914 None:intergenic
ACCATTCGTATAAGCACTGC+TGG 0.516953 2_4:+20013676 None:intergenic
ACATTATATTGGACTTTGCA+AGG 0.517791 2_4:+20012422 None:intergenic
ATGGATTCTATCAGAAGACT+TGG 0.519452 2_4:-20013708 Msa0319930:CDS
GTCTCTTCCATTGAAGCAGC+CGG 0.520513 2_4:+20012229 None:intergenic
CCAAGGTTTCGCCAACATCC+AGG 0.521156 2_4:+20015390 None:intergenic
AATCTCTATTTGAGCTTCGA+TGG 0.522019 2_4:-20012310 Msa0319930:CDS
AGACATGAAAGATGAGAAGC+AGG 0.524871 2_4:-20010392 Msa0319930:CDS
ATTTGAATTTAATGGTGTAA+CGG 0.525522 2_4:+20013760 None:intergenic
GTTGCTACGTTGTTGTCTTG+TGG 0.526879 2_4:-20011150 Msa0319930:CDS
AATCATTCTATGACTCTTGG+TGG 0.528182 2_4:-20012854 Msa0319930:CDS
CCAACCTGAACAATTTCTAC+AGG 0.529057 2_4:+20012376 None:intergenic
GATATTCAAAATTAACAACT+TGG 0.530058 2_4:+20012272 None:intergenic
TCAGCAGCAGTACAGCCACC+AGG 0.531177 2_4:+20011087 None:intergenic
GGATGTTGGCGAAACCTTGG+AGG 0.534036 2_4:-20015387 Msa0319930:CDS
AGATACTAAAGCAATTTGAA+AGG 0.535779 2_4:+20009749 None:intergenic
AGGACTTCTTTAAGACTGGT+AGG 0.538366 2_4:-20010354 Msa0319930:CDS
TTTACATGAATTTGGAGAAG+AGG 0.539840 2_4:+20016404 None:intergenic
CTTGTTGCGCTTTCTTAGAA+CGG 0.539892 2_4:+20010278 None:intergenic
ACATTGTCAAAGCTGCCATT+CGG 0.542413 2_4:+20013117 None:intergenic
GCTGATCTTGCTTATATGAA+AGG 0.543937 2_4:-20011069 Msa0319930:CDS
TTTCAACGCAATTTCGAACA+AGG 0.546511 2_4:+20011991 None:intergenic
AGAAGAGGGTCTGTTCTGAA+TGG 0.546605 2_4:+20016419 None:intergenic
AGTATGGCGTGAATCTCATT+CGG 0.549858 2_4:+20015341 None:intergenic
AAGTCTTCTGATAGAATCCA+TGG 0.551451 2_4:+20013710 None:intergenic
TTGAGAAAGTAATCCTGCGT+TGG 0.551923 2_4:-20010462 Msa0319930:CDS
TCTTGTCTCAAAGTTGCGAA+AGG 0.552815 2_4:+20010735 None:intergenic
GCAGGAAAGCGATGTAGAAG+AGG 0.559635 2_4:-20010374 Msa0319930:CDS
ATGGCACAAAACAACTTCAC+AGG 0.561027 2_4:-20016163 Msa0319930:CDS
GAGTCTGGAGCACATAGTCC+TGG 0.563482 2_4:-20014239 Msa0319930:CDS
CAGTGGAAGAAACCCATGAA+GGG 0.564862 2_4:+20012612 None:intergenic
AGAGTATAGCAGGATGAAGA+TGG 0.564933 2_4:-20010257 Msa0319930:CDS
TATGTAGGAATTTCTGAGGA+AGG 0.565423 2_4:+20012953 None:intergenic
GGAGTTAGAATACCATATGT+AGG 0.565803 2_4:+20012938 None:intergenic
AACATCTTCGAACAAAGCCT+GGG 0.568972 2_4:+20014465 None:intergenic
GTGTTTCACGATAATGAACC+AGG 0.574522 2_4:+20014221 None:intergenic
ACTAAAATTGCGATATCAGT+CGG 0.575281 2_4:-20010821 Msa0319930:CDS
GTCAGAATAGCTTTGGAACG+TGG 0.576268 2_4:-20012790 Msa0319930:CDS
TTCATTGACTAAAATGTCAA+CGG 0.578344 2_4:+20012823 None:intergenic
GCAAATTCAATGGCTTGACA+TGG 0.579151 2_4:+20015294 None:intergenic
ACCAGCAGTGCTTATACGAA+TGG 0.580709 2_4:-20013677 Msa0319930:intron
TTAAAGAGAAAAGGTTTCCG+TGG 0.583364 2_4:-20010436 Msa0319930:CDS
TAAAGAGAAAAGGTTTCCGT+GGG 0.583584 2_4:-20010435 Msa0319930:CDS
CTTGCCATAGGCTGTGATGA+TGG 0.583597 2_4:-20016182 Msa0319930:exon
ATGTATCCTTTAAGTACACT+TGG 0.583656 2_4:+20010908 None:intergenic
AGTGTACTTAAAGGATACAT+TGG 0.584610 2_4:-20010905 Msa0319930:CDS
GCTTATATGAAAGGATATGA+CGG 0.585929 2_4:-20011060 Msa0319930:CDS
ATTTCCGCGACAAATTTGGA+TGG 0.586245 2_4:-20011817 Msa0319930:CDS
CTTCACTAGAGAAAACATCA+AGG 0.586742 2_4:+20012140 None:intergenic
ACTTGATTGGGATGAACTAG+TGG 0.587256 2_4:-20013290 Msa0319930:CDS
TAATAGCCTGACGTCGCATG+TGG 0.587369 2_4:+20010644 None:intergenic
TATGACTCAGACCTGGATGT+TGG 0.588242 2_4:-20015401 Msa0319930:intron
TCAATTTATCAGTCCAGAGG+AGG 0.588337 2_4:-20010797 Msa0319930:CDS
TCAGTGGAAGAAACCCATGA+AGG 0.594547 2_4:+20012611 None:intergenic
CTCTACGCAACTTCCATGAA+CGG 0.595420 2_4:+20010674 None:intergenic
CAGCAGCAGTACAGCCACCA+GGG 0.604424 2_4:+20011088 None:intergenic
GGAAGTTCCTAAGCATCTTG+CGG 0.606340 2_4:+20014816 None:intergenic
TTAGAGGCTTTCAAGTGCGT+AGG 0.607046 2_4:-20010519 Msa0319930:CDS
ATTTACTGGATCATTTGTAG+TGG 0.608395 2_4:+20010951 None:intergenic
TTCTCTTTAAAAGCCAACGC+AGG 0.610360 2_4:+20010449 None:intergenic
TGCAATGTTGGGATATACTT+GGG 0.615912 2_4:-20011876 Msa0319930:CDS
TTAGGAACTTCCGAAAAGAT+GGG 0.618001 2_4:-20014805 Msa0319930:CDS
AGCTTACCGGACAACAGCCG+AGG 0.619242 2_4:-20010881 Msa0319930:CDS
CTAAATCAAAGCTTACCGAA+TGG 0.621517 2_4:-20013132 Msa0319930:CDS
TTCACGAATCCAGGAGAATG+CGG 0.627682 2_4:+20012331 None:intergenic
TTCTTCCACTGAGAAAACAA+AGG 0.631295 2_4:-20012600 Msa0319930:intron
AGCTTAGCTGGAAATATCAG+TGG 0.631881 2_4:-20010985 Msa0319930:CDS
ACCATATGTAGGAATTTCTG+AGG 0.631920 2_4:+20012949 None:intergenic
AGAACTCATCAATTCTGATG+TGG 0.633421 2_4:-20009945 Msa0319930:CDS
CTTTGAGACAAGAAAAGCAA+TGG 0.633518 2_4:-20010725 Msa0319930:CDS
GATGGCACATAGTCAAGCAA+AGG 0.635449 2_4:-20010239 Msa0319930:intron
TTCACTAGAGAAAACATCAA+GGG 0.636868 2_4:+20012141 None:intergenic
CCGGATTCACCTCAAGCCCA+CGG 0.642313 2_4:+20010419 None:intergenic
TTTCTGATACAACTGCACCA+TGG 0.644660 2_4:-20013727 Msa0319930:CDS
AATGCGGCAATACCCAGCAT+CGG 0.652701 2_4:+20012347 None:intergenic
AGTGGAAGAAACCCATGAAG+GGG 0.653131 2_4:+20012613 None:intergenic
TTACACACCATGTTCTGTAG+AGG 0.653988 2_4:-20012750 Msa0319930:CDS
ACCCCTACTATACAAAATGG+AGG 0.655140 2_4:-20013253 Msa0319930:intron
AGTATTTCATATCACTGAGG+TGG 0.659277 2_4:-20012636 Msa0319930:CDS
TAAGACTGGTAGGAAACAAG+CGG 0.659485 2_4:-20010344 Msa0319930:CDS
GGTTCAATTTATCAGTCCAG+AGG 0.660144 2_4:-20010800 Msa0319930:CDS
CTGTCCATCCAAATTTGTCG+CGG 0.660885 2_4:+20011813 None:intergenic
GGCCGTGTGCATAATATACG+TGG 0.667740 2_4:+20014495 None:intergenic
TCATTATCGTGAAACACAAG+AGG 0.669255 2_4:-20014215 Msa0319930:intron
AATGGATCAGTAACAGACGA+AGG 0.679283 2_4:+20012704 None:intergenic
TCCAATATAATGTGTGTCTG+TGG 0.683099 2_4:-20012412 Msa0319930:CDS
GTTGACGCCTCTACAGAACA+TGG 0.690824 2_4:+20012743 None:intergenic
GATCCAACTACCGAATACCC+TGG 0.692497 2_4:-20011105 Msa0319930:CDS
TTACTGCTCCCAGACTCTGG+CGG 0.695060 2_4:+20012917 None:intergenic
ATCCACGTATATTATGCACA+CGG 0.702464 2_4:-20014497 Msa0319930:CDS
TCTGTACTGGATCCGAGCAG+CGG 0.708022 2_4:+20010699 None:intergenic
AATGGAAGAGACATACAACT+GGG 0.712092 2_4:-20012218 Msa0319930:CDS
GCACACGGCCAAGATAACCC+AGG 0.722098 2_4:-20014482 Msa0319930:CDS
AGAACGCGTTGAGAGATCTG+TGG 0.723214 2_4:-20010320 Msa0319930:CDS
ACTACTGAGTATGATGCACA+AGG 0.723260 2_4:-20011920 Msa0319930:CDS
TGATTTAGTTGATAGTAACG+CGG 0.738031 2_4:+20013147 None:intergenic
AAATGCTGAGAACCTTACAG+AGG 0.749608 2_4:-20010932 Msa0319930:CDS
ACAAGTATTTCATATCACTG+AGG 0.757355 2_4:-20012639 Msa0319930:CDS
CCAACTACCGAATACCCTGG+TGG 0.762091 2_4:-20011102 Msa0319930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATATTATATAGTATATA+TGG + chr2_4:20010878-20010897 None:intergenic 10.0%
!! ATTTATTTATTGAAGAAAAT+TGG - chr2_4:20012258-20012277 Msa0319930:CDS 10.0%
!! TTTATTTATTGAAGAAAATT+GGG - chr2_4:20012259-20012278 Msa0319930:CDS 10.0%
!! TATATCATTATAATCAATTA+AGG + chr2_4:20012592-20012611 None:intergenic 10.0%
!!! TATACTTTAAATTTAACTTT+TGG - chr2_4:20012909-20012928 Msa0319930:CDS 10.0%
!! ATGATAAATTTACATGAATT+TGG + chr2_4:20009697-20009716 None:intergenic 15.0%
!! TAAAAATGAAAAATCAAAAG+TGG + chr2_4:20009740-20009759 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTTGTGG+AGG - chr2_4:20010096-20010115 Msa0319930:intron 15.0%
!!! TTTTTTTTTTTTTTTGTGGA+GGG - chr2_4:20010097-20010116 Msa0319930:intron 15.0%
!!! TATTTTGTTGTTTAATTGTT+TGG - chr2_4:20010123-20010142 Msa0319930:intron 15.0%
!! ATTTCAAATATATCGTAAAA+AGG + chr2_4:20010484-20010503 None:intergenic 15.0%
!!! TTTATTTATTTGATGTTTTG+AGG - chr2_4:20011394-20011413 Msa0319930:intron 15.0%
!!! TTATTTATTTGATGTTTTGA+GGG - chr2_4:20011395-20011414 Msa0319930:intron 15.0%
!!! ATTTAAAGTATAAAATTGCA+AGG + chr2_4:20012901-20012920 None:intergenic 15.0%
!! AAATTAATCACATATTAGAA+CGG + chr2_4:20015950-20015969 None:intergenic 15.0%
!!! TATGAAAAGTTTATGTTTTT+GGG - chr2_4:20016199-20016218 Msa0319930:five_prime_UTR 15.0%
!!! TTTTTTTTCTTTCTTTGTAT+AGG - chr2_4:20016266-20016285 Msa0319930:intron 15.0%
!! AAAGAAAAGAAAGTAGAAAA+AGG - chr2_4:20009584-20009603 Msa0319930:three_prime_UTR 20.0%
!! AAGAAAAGAAAGTAGAAAAA+GGG - chr2_4:20009585-20009604 Msa0319930:three_prime_UTR 20.0%
!! AAAAAAATTAAACCAAACCA+AGG + chr2_4:20010083-20010102 None:intergenic 20.0%
!!! TATAATTTTCAATGCAACTT+AGG - chr2_4:20010191-20010210 Msa0319930:intron 20.0%
!! AAGATTTCTGATTAAACAAA+AGG + chr2_4:20010353-20010372 None:intergenic 20.0%
!! TTGTTTAATCAGAAATCTTT+CGG - chr2_4:20010354-20010373 Msa0319930:CDS 20.0%
!!! TTACGATATATTTGAAATAC+TGG - chr2_4:20010486-20010505 Msa0319930:CDS 20.0%
!! ATCAAATAAATAAAACAGTG+AGG + chr2_4:20011388-20011407 None:intergenic 20.0%
!! AATCAAATATAACACAGTTA+TGG + chr2_4:20011470-20011489 None:intergenic 20.0%
!! AACATGCATACATAATATAT+AGG + chr2_4:20011709-20011728 None:intergenic 20.0%
!!! GTTTTTATTGTTTTTCTTTC+AGG - chr2_4:20011829-20011848 Msa0319930:CDS 20.0%
!!! TATCCACTTTTAAATTTTCA+TGG - chr2_4:20012121-20012140 Msa0319930:CDS 20.0%
!! AATCCATGAAAATTTAAAAG+TGG + chr2_4:20012127-20012146 None:intergenic 20.0%
!! CAATAAATAAATAGATCACA+TGG + chr2_4:20012250-20012269 None:intergenic 20.0%
!! ATTTGAATTTAATGGTGTAA+CGG + chr2_4:20012333-20012352 None:intergenic 20.0%
!! TCATTATAATCAATTAAGGT+TGG + chr2_4:20012588-20012607 None:intergenic 20.0%
!! AACAATATATCATAACCAAT+AGG + chr2_4:20012646-20012665 None:intergenic 20.0%
!!! TCTATAGAGTTTTTATAAAC+AGG - chr2_4:20013103-20013122 Msa0319930:intron 20.0%
!! AGATATATGAGAAAAAGAAA+AGG + chr2_4:20013519-20013538 None:intergenic 20.0%
!! GATATTCAAAATTAACAACT+TGG + chr2_4:20013821-20013840 None:intergenic 20.0%
!!! TTTGGAAAGAAATAATGTTT+TGG + chr2_4:20014015-20014034 None:intergenic 20.0%
!! TAGTTATGTATGTATCTTTA+GGG + chr2_4:20014768-20014787 None:intergenic 20.0%
!! ATAGTTATGTATGTATCTTT+AGG + chr2_4:20014769-20014788 None:intergenic 20.0%
!!! TTTGTTTGAAATTTGTCTTA+GGG - chr2_4:20014909-20014928 Msa0319930:intron 20.0%
!! CAACTTAAAGAAAAAAATTC+AGG + chr2_4:20015512-20015531 None:intergenic 20.0%
!! AACAAAAAATAACGACAATT+TGG - chr2_4:20015914-20015933 Msa0319930:intron 20.0%
!! GTTAATACAATTCAAATACA+TGG + chr2_4:20016045-20016064 None:intergenic 20.0%
!! ATTTGACATGATTATTAACT+TGG - chr2_4:20016087-20016106 Msa0319930:intron 20.0%
!!! CAAAAACATAAACTTTTCAT+AGG + chr2_4:20016200-20016219 None:intergenic 20.0%
!!! CTATGAAAAGTTTATGTTTT+TGG - chr2_4:20016198-20016217 Msa0319930:five_prime_UTR 20.0%
!! TCTAATAATCACATCAAATA+AGG + chr2_4:20016459-20016478 None:intergenic 20.0%
! GTTTCTATTAATGTTGTTGT+AGG - chr2_4:20009842-20009861 Msa0319930:three_prime_UTR 25.0%
! TATGAGCATAATTCAAAGTT+AGG + chr2_4:20010012-20010031 None:intergenic 25.0%
!! TATTCTTATTTATGCTACCT+TGG - chr2_4:20010063-20010082 Msa0319930:intron 25.0%
!! TGTTGTTTAATTGTTTGGTA+TGG - chr2_4:20010128-20010147 Msa0319930:intron 25.0%
!!! AGTGAAAAAAGAAGTTTTGT+CGG - chr2_4:20010214-20010233 Msa0319930:intron 25.0%
! TAAAAGTTGTCAAAGATTTG+AGG + chr2_4:20010264-20010283 None:intergenic 25.0%
!!! ATGCTTTTTTTCTTTGTAAC+CGG + chr2_4:20010411-20010430 None:intergenic 25.0%
!! AAGGAAATTGTTACTGTTTT+AGG + chr2_4:20010465-20010484 None:intergenic 25.0%
! TAGCAAACACTACATTTAAT+TGG + chr2_4:20010556-20010575 None:intergenic 25.0%
! ATATTTGTAATTGCTGAGTA+TGG + chr2_4:20010768-20010787 None:intergenic 25.0%
!! TCTGATAGCAATATACTTTT+GGG + chr2_4:20010821-20010840 None:intergenic 25.0%
!! TTCTGATAGCAATATACTTT+TGG + chr2_4:20010822-20010841 None:intergenic 25.0%
! ATGCATTGTTCAACTATATA+TGG - chr2_4:20011047-20011066 Msa0319930:CDS 25.0%
! TCCTACATAGATCTATTTAA+TGG - chr2_4:20011105-20011124 Msa0319930:CDS 25.0%
! TCCATTAAATAGATCTATGT+AGG + chr2_4:20011109-20011128 None:intergenic 25.0%
! ACATCATATAACTCACAATA+AGG + chr2_4:20011184-20011203 None:intergenic 25.0%
! TATAATGTTGTGTGTAAAAC+AGG - chr2_4:20011230-20011249 Msa0319930:intron 25.0%
! AACTGGAAAAAGAAAAATGA+CGG - chr2_4:20011311-20011330 Msa0319930:intron 25.0%
! ATTTGTGATCTATGTATTAG+TGG - chr2_4:20011732-20011751 Msa0319930:intron 25.0%
!!! GTTCAATTTTTAAGAGGAAA+AGG + chr2_4:20011924-20011943 None:intergenic 25.0%
! TCTTAAAAATTGAACTTCAC+CGG - chr2_4:20011929-20011948 Msa0319930:CDS 25.0%
!! CATATACATCTTTATTTGTC+CGG + chr2_4:20011951-20011970 None:intergenic 25.0%
! AAACCAAAAAAATACTCGTA+GGG + chr2_4:20011995-20012014 None:intergenic 25.0%
! AAAACCAAAAAAATACTCGT+AGG + chr2_4:20011996-20012015 None:intergenic 25.0%
!!! AGTATTTTTTTGGTTTTCTG+AGG - chr2_4:20011999-20012018 Msa0319930:CDS 25.0%
! TTTACCAATGAATGTGTTTA+AGG - chr2_4:20012039-20012058 Msa0319930:CDS 25.0%
! TTACCAATGAATGTGTTTAA+GGG - chr2_4:20012040-20012059 Msa0319930:CDS 25.0%
!! AACTAAGTTTTTATAGACTC+GGG + chr2_4:20012069-20012088 None:intergenic 25.0%
!! CAACTAAGTTTTTATAGACT+CGG + chr2_4:20012070-20012089 None:intergenic 25.0%
! AATAAATAGATCACATGGTA+AGG + chr2_4:20012245-20012264 None:intergenic 25.0%
! TTTGAATTTAATGGTGTAAC+GGG + chr2_4:20012332-20012351 None:intergenic 25.0%
!! ATATAGTGTTGTTACACATT+AGG - chr2_4:20012607-20012626 Msa0319930:CDS 25.0%
!! GTAATTGTTTCTTCTTTATC+TGG - chr2_4:20012859-20012878 Msa0319930:CDS 25.0%
!!! CTTTAAATTTAACTTTTGGC+AGG - chr2_4:20012913-20012932 Msa0319930:CDS 25.0%
! TAAAGAACACAAATGAAAGA+AGG + chr2_4:20013008-20013027 None:intergenic 25.0%
!! TTCATTGACTAAAATGTCAA+CGG + chr2_4:20013270-20013289 None:intergenic 25.0%
! CAATTCTAATTGCAAAATAG+CGG + chr2_4:20013582-20013601 None:intergenic 25.0%
! AAATTAACAACTTGGCTAAT+AGG + chr2_4:20013813-20013832 None:intergenic 25.0%
!! CATGAAGTGTATAAAACTTT+TGG + chr2_4:20014033-20014052 None:intergenic 25.0%
! GACAAATTTCACATAGTTTA+AGG + chr2_4:20014483-20014502 None:intergenic 25.0%
! GACGAATTTCATATAGTTTA+TGG + chr2_4:20014514-20014533 None:intergenic 25.0%
!! TTCGTCAAATTATTCCATTT+TGG - chr2_4:20014528-20014547 Msa0319930:intron 25.0%
!! GTTTGTTTGAAATTTGTCTT+AGG - chr2_4:20014908-20014927 Msa0319930:intron 25.0%
!! TTAAGTTGTTAATGCTTGAT+TGG - chr2_4:20015524-20015543 Msa0319930:intron 25.0%
! AAAAATAACGACAATTTGGA+TGG - chr2_4:20015918-20015937 Msa0319930:intron 25.0%
! ATGTGATTAATTTCGTTATG+TGG - chr2_4:20015957-20015976 Msa0319930:intron 25.0%
! GGTTAATTACATTTAGTAGA+TGG + chr2_4:20016024-20016043 None:intergenic 25.0%
! TTACATAAGTCTAAAGGAAT+TGG + chr2_4:20016231-20016250 None:intergenic 25.0%
! GTTACATTACATAAGTCTAA+AGG + chr2_4:20016237-20016256 None:intergenic 25.0%
! GATACTAAAGCAATTTGAAA+GGG + chr2_4:20016343-20016362 None:intergenic 25.0%
! AGATACTAAAGCAATTTGAA+AGG + chr2_4:20016344-20016363 None:intergenic 25.0%
! ATTGCTTTAGTATCTTGAAA+TGG - chr2_4:20016349-20016368 Msa0319930:intron 25.0%
! TTGCTTTAGTATCTTGAAAT+GGG - chr2_4:20016350-20016369 Msa0319930:intron 25.0%
! TCATGCTTAATTAAGATGTT+TGG - chr2_4:20016387-20016406 Msa0319930:intron 25.0%
TTACATGAATTTGGAGAAGA+GGG + chr2_4:20009688-20009707 None:intergenic 30.0%
TTTACATGAATTTGGAGAAG+AGG + chr2_4:20009689-20009708 None:intergenic 30.0%
!! TATGAAGTTTGTTGTGTTTG+TGG - chr2_4:20009866-20009885 Msa0319930:three_prime_UTR 30.0%
TTATTTATGCTACCTTGGTT+TGG - chr2_4:20010068-20010087 Msa0319930:intron 30.0%
GATAGATGTTAGTAAGTTAG+TGG - chr2_4:20010294-20010313 Msa0319930:CDS 30.0%
TATTATATATGACTCAGACC+TGG - chr2_4:20010682-20010701 Msa0319930:CDS 30.0%
! ATACTTTTGGGCAAATTCAA+TGG + chr2_4:20010809-20010828 None:intergenic 30.0%
AAGCTTCAACAAGAACTAAA+GGG + chr2_4:20010971-20010990 None:intergenic 30.0%
AAAGCTTCAACAAGAACTAA+AGG + chr2_4:20010972-20010991 None:intergenic 30.0%
TGAGTTATATGATGTCAAAC+AGG - chr2_4:20011189-20011208 Msa0319930:intron 30.0%
ACTGGAAAAAGAAAAATGAC+GGG - chr2_4:20011312-20011331 Msa0319930:intron 30.0%
! AATGTTTAGCTTAACCCTTA+AGG - chr2_4:20011675-20011694 Msa0319930:intron 30.0%
GCAAATAGTAAAGTGACTTT+CGG - chr2_4:20011804-20011823 Msa0319930:CDS 30.0%
!! GGTGAAGTTCAATTTTTAAG+AGG + chr2_4:20011930-20011949 None:intergenic 30.0%
AACACATTCATTGGTAAACA+AGG + chr2_4:20012037-20012056 None:intergenic 30.0%
ATACCCTTAAACACATTCAT+TGG + chr2_4:20012046-20012065 None:intergenic 30.0%
!!! GCTTGTTTTAGAGACAAATT+TGG + chr2_4:20012096-20012115 None:intergenic 30.0%
GGATAATACTATCAACCTAT+TGG - chr2_4:20012628-20012647 Msa0319930:CDS 30.0%
GTTGTTGTCATAGATATTGT+TGG - chr2_4:20012663-20012682 Msa0319930:CDS 30.0%
GGAATGAAAATAGGTATCTA+CGG + chr2_4:20012702-20012721 None:intergenic 30.0%
ACAGTAAAGGGAATGAAAAT+AGG + chr2_4:20012711-20012730 None:intergenic 30.0%
ATGAGCTTAATACACTTGAT+TGG - chr2_4:20012787-20012806 Msa0319930:CDS 30.0%
TGAGCTTAATACACTTGATT+GGG - chr2_4:20012788-20012807 Msa0319930:CDS 30.0%
AATACCCCTACTATACAAAA+TGG - chr2_4:20012834-20012853 Msa0319930:CDS 30.0%
! TACCTCCATTTTGTATAGTA+GGG + chr2_4:20012842-20012861 None:intergenic 30.0%
! TTACCTCCATTTTGTATAGT+AGG + chr2_4:20012843-20012862 None:intergenic 30.0%
!! TGATTTAGTTGATAGTAACG+CGG + chr2_4:20012946-20012965 None:intergenic 30.0%
TATCACTAGAAGACAGAAAA+AGG + chr2_4:20013051-20013070 None:intergenic 30.0%
! AGTTTTTATAAACAGGTTGC+TGG - chr2_4:20013110-20013129 Msa0319930:intron 30.0%
TTTGATCGTTAACACTTTCT+GGG + chr2_4:20013214-20013233 None:intergenic 30.0%
! TTTTGATCGTTAACACTTTC+TGG + chr2_4:20013215-20013234 None:intergenic 30.0%
AAGAATCATTCTATGACTCT+TGG - chr2_4:20013233-20013252 Msa0319930:intron 30.0%
!! GTTGACATTTTAGTCAATGA+AGG - chr2_4:20013269-20013288 Msa0319930:CDS 30.0%
TAATCAACAATCTTCTCTTC+CGG - chr2_4:20013427-20013446 Msa0319930:intron 30.0%
GTGATATGAAATACTTGTTC+CGG + chr2_4:20013449-20013468 None:intergenic 30.0%
ACAAGTATTTCATATCACTG+AGG - chr2_4:20013451-20013470 Msa0319930:intron 30.0%
CAATTAGAATTGAACTTCCA+CGG - chr2_4:20013590-20013609 Msa0319930:intron 30.0%
AGAGAAAATATCCAGTTACT+AGG + chr2_4:20013635-20013654 None:intergenic 30.0%
ACATTATATTGGACTTTGCA+AGG + chr2_4:20013671-20013690 None:intergenic 30.0%
TTGAATTTCGTCTTCAAATG+AGG - chr2_4:20013895-20013914 Msa0319930:intron 30.0%
TTCACTAGAGAAAACATCAA+GGG + chr2_4:20013952-20013971 None:intergenic 30.0%
!! GGAAAGAAATAATGTTTTGG+AGG + chr2_4:20014012-20014031 None:intergenic 30.0%
!!! CTTTTGGAACGTATTGTTTT+AGG - chr2_4:20014140-20014159 Msa0319930:intron 30.0%
CACACAAATGAATTACACTT+TGG + chr2_4:20014196-20014215 None:intergenic 30.0%
AATTCATTTGTGTGCAATGT+TGG - chr2_4:20014202-20014221 Msa0319930:intron 30.0%
ATTCATTTGTGTGCAATGTT+GGG - chr2_4:20014203-20014222 Msa0319930:intron 30.0%
AATCTGTTTGTTCAAACAAG+TGG + chr2_4:20014349-20014368 None:intergenic 30.0%
TAGTTTAGAGACTAACTTGA+CGG - chr2_4:20014597-20014616 Msa0319930:intron 30.0%
ATATAGTTTAGAGACCAAAC+AGG - chr2_4:20014654-20014673 Msa0319930:intron 30.0%
AATTGGGTAAACCATCAATT+TGG + chr2_4:20014700-20014719 None:intergenic 30.0%
GAAGCAATGTCAGAAAAATT+GGG + chr2_4:20014716-20014735 None:intergenic 30.0%
TGAAGCAATGTCAGAAAAAT+TGG + chr2_4:20014717-20014736 None:intergenic 30.0%
! ATCATTAAGTTAAGCACTGT+AGG - chr2_4:20014804-20014823 Msa0319930:CDS 30.0%
! TCATTAAGTTAAGCACTGTA+GGG - chr2_4:20014805-20014824 Msa0319930:CDS 30.0%
AAACAATGATATTTCCGTTC+AGG + chr2_4:20014888-20014907 None:intergenic 30.0%
AATTTGTCTTAGGGAGAATA+TGG - chr2_4:20014918-20014937 Msa0319930:intron 30.0%
GCTTATATGAAAGGATATGA+CGG - chr2_4:20015030-20015049 Msa0319930:intron 30.0%
!! TTATCTTTCAGAAAAGTGTC+TGG - chr2_4:20015062-20015081 Msa0319930:intron 30.0%
ATTTACTGGATCATTTGTAG+TGG + chr2_4:20015142-20015161 None:intergenic 30.0%
ATGTATCCTTTAAGTACACT+TGG + chr2_4:20015185-20015204 None:intergenic 30.0%
AGTGTACTTAAAGGATACAT+TGG - chr2_4:20015185-20015204 Msa0319930:intron 30.0%
ACTAAAATTGCGATATCAGT+CGG - chr2_4:20015269-20015288 Msa0319930:intron 30.0%
! ATTGGTTATATTTTCGATGC+AGG - chr2_4:20015542-20015561 Msa0319930:intron 30.0%
GGCAATATCGTAAAATTCTA+TGG - chr2_4:20015592-20015611 Msa0319930:intron 30.0%
GATTAATTTCGTTATGTGGA+TGG - chr2_4:20015961-20015980 Msa0319930:intron 30.0%
AATGACACTCTGTTCTTCTT+TGG + chr2_4:20009618-20009637 None:intergenic 35.0%
ACTGTAACTGTGAACAGAAA+AGG + chr2_4:20009768-20009787 None:intergenic 35.0%
AGAAGAGAAAAACTTGCCAT+AGG - chr2_4:20009896-20009915 Msa0319930:three_prime_UTR 35.0%
!! CTTGTTGGTTCAGAAATACA+TGG - chr2_4:20009954-20009973 Msa0319930:CDS 35.0%
TTGTACTACCTCTTAAGGTA+TGG + chr2_4:20009983-20010002 None:intergenic 35.0%
ATGCATTGTACTACCTCTTA+AGG + chr2_4:20009988-20010007 None:intergenic 35.0%
AGTTGTCAAAGATTTGAGGA+AGG + chr2_4:20010260-20010279 None:intergenic 35.0%
TTAACTCACCAACCGATTAA+GGG - chr2_4:20010383-20010402 Msa0319930:CDS 35.0%
!! GGTTCTAAACTATATGTCGA+TGG + chr2_4:20010535-20010554 None:intergenic 35.0%
TGAGTAGAAGTAGAAACATG+TGG - chr2_4:20010585-20010604 Msa0319930:intron 35.0%
TATTGCTATCAGAACTAACC+TGG - chr2_4:20010828-20010847 Msa0319930:CDS 35.0%
AATGTTGTGTGTAAAACAGG+TGG - chr2_4:20011233-20011252 Msa0319930:intron 35.0%
TTAGGAACTTCCGAAAAGAT+GGG - chr2_4:20011285-20011304 Msa0319930:intron 35.0%
ATCCACGTATATTATGCACA+CGG - chr2_4:20011593-20011612 Msa0319930:intron 35.0%
! GCTTTGTTCGAAGATGTTAT+TGG - chr2_4:20011630-20011649 Msa0319930:intron 35.0%
TATAGGAATCGAGACCTTAA+GGG + chr2_4:20011692-20011711 None:intergenic 35.0%
ATATAGGAATCGAGACCTTA+AGG + chr2_4:20011693-20011712 None:intergenic 35.0%
!! TTGTTTTTCTTTCAGGAGTC+TGG - chr2_4:20011836-20011855 Msa0319930:CDS 35.0%
TCATTATCGTGAAACACAAG+AGG - chr2_4:20011875-20011894 Msa0319930:CDS 35.0%
!!! AGACCCTACGAGTATTTTTT+TGG - chr2_4:20011989-20012008 Msa0319930:CDS 35.0%
! TCATCTAAAGTGAGCAAGAA+AGG + chr2_4:20012180-20012199 None:intergenic 35.0%
ACATATCAATCATGAGTCTC+GGG + chr2_4:20012212-20012231 None:intergenic 35.0%
CACATATCAATCATGAGTCT+CGG + chr2_4:20012213-20012232 None:intergenic 35.0%
GGACTCGCATTTGAATTTAA+TGG + chr2_4:20012341-20012360 None:intergenic 35.0%
AAGTCTTCTGATAGAATCCA+TGG + chr2_4:20012383-20012402 None:intergenic 35.0%
ATGGATTCTATCAGAAGACT+TGG - chr2_4:20012382-20012401 Msa0319930:CDS 35.0%
AAAATAGGTATCTACGGTCA+AGG + chr2_4:20012696-20012715 None:intergenic 35.0%
! ACCTCCATTTTGTATAGTAG+GGG + chr2_4:20012841-20012860 None:intergenic 35.0%
CTAAATCAAAGCTTACCGAA+TGG - chr2_4:20012958-20012977 Msa0319930:CDS 35.0%
! TATGTAGGAATTTCTGAGGA+AGG + chr2_4:20013140-20013159 None:intergenic 35.0%
TCCTCAGAAATTCCTACATA+TGG - chr2_4:20013140-20013159 Msa0319930:CDS 35.0%
ACCATATGTAGGAATTTCTG+AGG + chr2_4:20013144-20013163 None:intergenic 35.0%
GGAGTTAGAATACCATATGT+AGG + chr2_4:20013155-20013174 None:intergenic 35.0%
AATCATTCTATGACTCTTGG+TGG - chr2_4:20013236-20013255 Msa0319930:intron 35.0%
TTGCAAAGTCAGAATAGCTT+TGG - chr2_4:20013293-20013312 Msa0319930:CDS 35.0%
AGAACATGGTGTGTAAGATA+TGG + chr2_4:20013336-20013355 None:intergenic 35.0%
! TACTGATCCATTTTCATCAC+TGG - chr2_4:20013397-20013416 Msa0319930:intron 35.0%
AGTATTTCATATCACTGAGG+TGG - chr2_4:20013454-20013473 Msa0319930:intron 35.0%
TTCTTCCACTGAGAAAACAA+AGG - chr2_4:20013490-20013509 Msa0319930:intron 35.0%
TCCAATATAATGTGTGTCTG+TGG - chr2_4:20013678-20013697 Msa0319930:CDS 35.0%
TGTTCCTGTAGAAATTGTTC+AGG - chr2_4:20013710-20013729 Msa0319930:CDS 35.0%
AAATAGAGATTCACGAATCC+AGG + chr2_4:20013771-20013790 None:intergenic 35.0%
AATCTCTATTTGAGCTTCGA+TGG - chr2_4:20013780-20013799 Msa0319930:intron 35.0%
AATGGAAGAGACATACAACT+GGG - chr2_4:20013872-20013891 Msa0319930:intron 35.0%
CTTCACTAGAGAAAACATCA+AGG + chr2_4:20013953-20013972 None:intergenic 35.0%
!! AACAAGGTATTTTTCGCTTG+CGG + chr2_4:20014086-20014105 None:intergenic 35.0%
TTTCAACGCAATTTCGAACA+AGG + chr2_4:20014102-20014121 None:intergenic 35.0%
TTGCGTTGAAAAACAAACTC+AGG - chr2_4:20014111-20014130 Msa0319930:intron 35.0%
TGCGTTGAAAAACAAACTCA+GGG - chr2_4:20014112-20014131 Msa0319930:intron 35.0%
TGAAAAACAAACTCAGGGAA+TGG - chr2_4:20014117-20014136 Msa0319930:intron 35.0%
TGCAATGTTGGGATATACTT+GGG - chr2_4:20014214-20014233 Msa0319930:intron 35.0%
!!! ATTACTTTGTTTTCGTGGTC+AGG - chr2_4:20014239-20014258 Msa0319930:CDS 35.0%
ACTTAGGGGACAAAATTGAT+GGG + chr2_4:20014409-20014428 None:intergenic 35.0%
TACTTAGGGGACAAAATTGA+TGG + chr2_4:20014410-20014429 None:intergenic 35.0%
CTTGCTAGTATACACCAAAA+TGG + chr2_4:20014545-20014564 None:intergenic 35.0%
GTATACTAGCAAGAGATACT+AGG - chr2_4:20014552-20014571 Msa0319930:intron 35.0%
GATACTAGGAACTAAAGAAG+CGG - chr2_4:20014566-20014585 Msa0319930:intron 35.0%
!! CTAACTTGACGGATTTCATA+TGG - chr2_4:20014608-20014627 Msa0319930:intron 35.0%
TACTTGAGAGACCAAATTGA+TGG - chr2_4:20014686-20014705 Msa0319930:intron 35.0%
!! TTAAGCACTGTAGGGTTTTT+AGG - chr2_4:20014813-20014832 Msa0319930:CDS 35.0%
AGGCTCATAACTAGATTAGA+AGG + chr2_4:20014868-20014887 None:intergenic 35.0%
AATCTAGTTATGAGCCTGAA+CGG - chr2_4:20014871-20014890 Msa0319930:intron 35.0%
GCTGATCTTGCTTATATGAA+AGG - chr2_4:20015021-20015040 Msa0319930:intron 35.0%
! TTTTCATTGCTGCTACTATC+TGG + chr2_4:20015326-20015345 None:intergenic 35.0%
!! CTTTGAGACAAGAAAAGCAA+TGG - chr2_4:20015365-20015384 Msa0319930:CDS 35.0%
CGTAAAATTCTATGGTCTGT+TGG - chr2_4:20015600-20015619 Msa0319930:intron 35.0%
!!! CGTTGGCTTTTAAAGAGAAA+AGG - chr2_4:20015645-20015664 Msa0319930:intron 35.0%
TTAAAGAGAAAAGGTTTCCG+TGG - chr2_4:20015654-20015673 Msa0319930:intron 35.0%
TAAAGAGAAAAGGTTTCCGT+GGG - chr2_4:20015655-20015674 Msa0319930:intron 35.0%
AGAACTCATCAATTCTGATG+TGG - chr2_4:20016145-20016164 Msa0319930:CDS 35.0%
TTAGCTCAATTTGCACACTA+TGG + chr2_4:20016317-20016336 None:intergenic 35.0%
AGATGTTTGGTAGATGTTTC+TGG - chr2_4:20016400-20016419 Msa0319930:intron 35.0%
ATGGCACAAAACAACTTCAC+AGG - chr2_4:20009927-20009946 Msa0319930:CDS 40.0%
AACTTCACAGGACAACTTGT+TGG - chr2_4:20009939-20009958 Msa0319930:CDS 40.0%
CATGGATTCCATACCTTAAG+AGG - chr2_4:20009972-20009991 Msa0319930:intron 40.0%
!!! TGGTTGCGTTAGTTTTGTCA+GGG - chr2_4:20010314-20010333 Msa0319930:CDS 40.0%
! TTTTGTCAGGGTTTGAACTC+AGG - chr2_4:20010326-20010345 Msa0319930:CDS 40.0%
!! CTTAATCGGTTGGTGAGTTA+AGG + chr2_4:20010384-20010403 None:intergenic 40.0%
CTTAACTCACCAACCGATTA+AGG - chr2_4:20010382-20010401 Msa0319930:CDS 40.0%
TTGTAACCGGTACCCTTAAT+CGG + chr2_4:20010398-20010417 None:intergenic 40.0%
AGTATGGCGTGAATCTCATT+CGG + chr2_4:20010752-20010771 None:intergenic 40.0%
GCAAATTCAATGGCTTGACA+TGG + chr2_4:20010799-20010818 None:intergenic 40.0%
CTAACCTGGTGTTTCTTTAG+TGG - chr2_4:20010842-20010861 Msa0319930:CDS 40.0%
GAATCCACTAAAGAAACACC+AGG + chr2_4:20010849-20010868 None:intergenic 40.0%
TATTTGACCGCAAGATGCTT+AGG - chr2_4:20011267-20011286 Msa0319930:intron 40.0%
CTTAGGAACTTCCGAAAAGA+TGG - chr2_4:20011284-20011303 Msa0319930:intron 40.0%
CTCATGAGCACTTAAAAGTG+AGG - chr2_4:20011351-20011370 Msa0319930:intron 40.0%
AACATCTTCGAACAAAGCCT+GGG + chr2_4:20011628-20011647 None:intergenic 40.0%
TAACATCTTCGAACAAAGCC+TGG + chr2_4:20011629-20011648 None:intergenic 40.0%
GTGTTTCACGATAATGAACC+AGG + chr2_4:20011872-20011891 None:intergenic 40.0%
! TGCTAACATTCGTTAGGTTG+TGG - chr2_4:20012284-20012303 Msa0319930:CDS 40.0%
GGTGCAGTTGTATCAGAAAT+AGG + chr2_4:20012362-20012381 None:intergenic 40.0%
TTTCTGATACAACTGCACCA+TGG - chr2_4:20012363-20012382 Msa0319930:CDS 40.0%
CTATCAGAAGACTTGGATTC+TGG - chr2_4:20012389-20012408 Msa0319930:CDS 40.0%
! CATTCCCTTTACTGTTTTCG+AGG - chr2_4:20012716-20012735 Msa0319930:CDS 40.0%
CCTACCTCGAAAACAGTAAA+GGG + chr2_4:20012723-20012742 None:intergenic 40.0%
ACCTACCTCGAAAACAGTAA+AGG + chr2_4:20012724-20012743 None:intergenic 40.0%
!! GTTTTCGAGGTAGGTCTTAA+TGG - chr2_4:20012729-20012748 Msa0319930:CDS 40.0%
ACTTGATTGGGATGAACTAG+TGG - chr2_4:20012800-20012819 Msa0319930:CDS 40.0%
ACCCCTACTATACAAAATGG+AGG - chr2_4:20012837-20012856 Msa0319930:CDS 40.0%
ATTGCAAGGTTCTTTCCGAA+CGG + chr2_4:20012887-20012906 None:intergenic 40.0%
ACATTGTCAAAGCTGCCATT+CGG + chr2_4:20012976-20012995 None:intergenic 40.0%
CAGTAGTACGAGTACAAAGT+CGG + chr2_4:20013074-20013093 None:intergenic 40.0%
TTACACACCATGTTCTGTAG+AGG - chr2_4:20013340-20013359 Msa0319930:CDS 40.0%
AATGGATCAGTAACAGACGA+AGG + chr2_4:20013389-20013408 None:intergenic 40.0%
! TCCATTTTCATCACTGGTGA+TGG - chr2_4:20013403-20013422 Msa0319930:intron 40.0%
TCCATCACCAGTGATGAAAA+TGG + chr2_4:20013407-20013426 None:intergenic 40.0%
!!! GGAAACCTTTGTTTTCTCAG+TGG + chr2_4:20013498-20013517 None:intergenic 40.0%
GCAAAATAGCGGTCGAAAAA+AGG + chr2_4:20013571-20013590 None:intergenic 40.0%
TAGGACCTGCAAGAAGTAAA+GGG + chr2_4:20013616-20013635 None:intergenic 40.0%
GCCACAGACACACATTATAT+TGG + chr2_4:20013682-20013701 None:intergenic 40.0%
CCAACCTGAACAATTTCTAC+AGG + chr2_4:20013717-20013736 None:intergenic 40.0%
CCTGTAGAAATTGTTCAGGT+TGG - chr2_4:20013714-20013733 Msa0319930:CDS 40.0%
CAACTTGGCTAATAGGCTTA+TGG + chr2_4:20013806-20013825 None:intergenic 40.0%
CAATGGAAGAGACATACAAC+TGG - chr2_4:20013871-20013890 Msa0319930:intron 40.0%
GAGAAAACATCAAGGGTCTT+CGG + chr2_4:20013945-20013964 None:intergenic 40.0%
TTAGTCTCTTTCAGTGCAGT+AGG + chr2_4:20013981-20014000 None:intergenic 40.0%
! GTATTTTTCGCTTGCGGAAA+GGG + chr2_4:20014080-20014099 None:intergenic 40.0%
ACTACTGAGTATGATGCACA+AGG - chr2_4:20014170-20014189 Msa0319930:intron 40.0%
GTGCAATGTTGGGATATACT+TGG - chr2_4:20014213-20014232 Msa0319930:intron 40.0%
!!! GGGCTATTACTTTGTTTTCG+TGG - chr2_4:20014234-20014253 Msa0319930:CDS 40.0%
ATTTCCGCGACAAATTTGGA+TGG - chr2_4:20014273-20014292 Msa0319930:intron 40.0%
CTTCATTGGGCAGCATATAA+TGG - chr2_4:20014302-20014321 Msa0319930:intron 40.0%
GTTTGTTCAAACAAGTGGAG+TGG + chr2_4:20014344-20014363 None:intergenic 40.0%
AGCAGTGAGAGTGATACTTA+GGG + chr2_4:20014424-20014443 None:intergenic 40.0%
TAGCAGTGAGAGTGATACTT+AGG + chr2_4:20014425-20014444 None:intergenic 40.0%
! GACGGATTTCATATGGTTCA+AGG - chr2_4:20014615-20014634 Msa0319930:intron 40.0%
AAGTATCACACTCTCCTGTT+TGG + chr2_4:20014671-20014690 None:intergenic 40.0%
GTTGGATCTGTCACCAAATT+GGG + chr2_4:20014973-20014992 None:intergenic 40.0%
AGTTGGATCTGTCACCAAAT+TGG + chr2_4:20014974-20014993 None:intergenic 40.0%
TTCAATGACATGAGCTTAGC+TGG - chr2_4:20015093-20015112 Msa0319930:intron 40.0%
AGCTTAGCTGGAAATATCAG+TGG - chr2_4:20015105-20015124 Msa0319930:intron 40.0%
CTGGATCATTTGTAGTGGTT+TGG + chr2_4:20015137-20015156 None:intergenic 40.0%
GTAAGGTTCTCAGCATTTAC+TGG + chr2_4:20015156-20015175 None:intergenic 40.0%
AAATGCTGAGAACCTTACAG+AGG - chr2_4:20015158-20015177 Msa0319930:intron 40.0%
AGAGGACCAAGTGTACTTAA+AGG - chr2_4:20015176-20015195 Msa0319930:intron 40.0%
GGTTCAATTTATCAGTCCAG+AGG - chr2_4:20015290-20015309 Msa0319930:CDS 40.0%
TCAATTTATCAGTCCAGAGG+AGG - chr2_4:20015293-20015312 Msa0319930:CDS 40.0%
TCTTGTCTCAAAGTTGCGAA+AGG + chr2_4:20015358-20015377 None:intergenic 40.0%
ACGTCAGGCTATTAGAATTC+AGG - chr2_4:20015455-20015474 Msa0319930:intron 40.0%
CAGGCTATTAGAATTCAGGT+AGG - chr2_4:20015459-20015478 Msa0319930:intron 40.0%
TTGAGAAAGTAATCCTGCGT+TGG - chr2_4:20015628-20015647 Msa0319930:intron 40.0%
! TTCTCTTTAAAAGCCAACGC+AGG + chr2_4:20015644-20015663 None:intergenic 40.0%
TCATCTTTCATGTCTTCGTC+CGG + chr2_4:20015693-20015712 None:intergenic 40.0%
AGACATGAAAGATGAGAAGC+AGG - chr2_4:20015698-20015717 Msa0319930:intron 40.0%
!! GAAGAGGACTTCTTTAAGAC+TGG - chr2_4:20015732-20015751 Msa0319930:intron 40.0%
!! AGGACTTCTTTAAGACTGGT+AGG - chr2_4:20015736-20015755 Msa0319930:intron 40.0%
TAAGACTGGTAGGAAACAAG+CGG - chr2_4:20015746-20015765 Msa0319930:intron 40.0%
CTTGTTGCGCTTTCTTAGAA+CGG + chr2_4:20015815-20015834 None:intergenic 40.0%
AGAGTATAGCAGGATGAAGA+TGG - chr2_4:20015833-20015852 Msa0319930:intron 40.0%
GTAGAATTGCTTTGTGCAGT+TGG - chr2_4:20016109-20016128 Msa0319930:intron 40.0%
! AGAAGAGGGTCTGTTCTGAA+TGG + chr2_4:20009674-20009693 None:intergenic 45.0%
!!! GTGGTTGCGTTAGTTTTGTC+AGG - chr2_4:20010313-20010332 Msa0319930:CDS 45.0%
TATGACTCAGACCTGGATGT+TGG - chr2_4:20010689-20010708 Msa0319930:CDS 45.0%
!!! TCTGCTTTTTGCTTCCTCCA+AGG + chr2_4:20010720-20010739 None:intergenic 45.0%
TGGAGGAAGCAAAAAGCAGA+TGG - chr2_4:20010720-20010739 Msa0319930:CDS 45.0%
GGAAGTTCCTAAGCATCTTG+CGG + chr2_4:20011277-20011296 None:intergenic 45.0%
! TCCAGTTGTGCCCATCTTTT+CGG + chr2_4:20011298-20011317 None:intergenic 45.0%
CTTATTTCCCCCTGTCAATC+AGG - chr2_4:20011553-20011572 Msa0319930:intron 45.0%
TTACCAACCTGATTGACAGG+GGG + chr2_4:20011563-20011582 None:intergenic 45.0%
GTTACCAACCTGATTGACAG+GGG + chr2_4:20011564-20011583 None:intergenic 45.0%
CGTTACCAACCTGATTGACA+GGG + chr2_4:20011565-20011584 None:intergenic 45.0%
TCGTTACCAACCTGATTGAC+AGG + chr2_4:20011566-20011585 None:intergenic 45.0%
GAACAAAGCCTGGGTTATCT+TGG + chr2_4:20011619-20011638 None:intergenic 45.0%
!! TGGGCTTGCTAACATTCGTT+AGG - chr2_4:20012278-20012297 Msa0319930:CDS 45.0%
ACCAGCAGTGCTTATACGAA+TGG - chr2_4:20012413-20012432 Msa0319930:CDS 45.0%
! ACCATTCGTATAAGCACTGC+TGG + chr2_4:20012417-20012436 None:intergenic 45.0%
!! CCCTTTACTGTTTTCGAGGT+AGG - chr2_4:20012720-20012739 Msa0319930:CDS 45.0%
! CTTCTTTATCTGGAGCCGTT+CGG - chr2_4:20012869-20012888 Msa0319930:CDS 45.0%
!! GTCAGAATAGCTTTGGAACG+TGG - chr2_4:20013300-20013319 Msa0319930:CDS 45.0%
AGTGGAAGAAACCCATGAAG+GGG + chr2_4:20013480-20013499 None:intergenic 45.0%
CAGTGGAAGAAACCCATGAA+GGG + chr2_4:20013481-20013500 None:intergenic 45.0%
TCAGTGGAAGAAACCCATGA+AGG + chr2_4:20013482-20013501 None:intergenic 45.0%
CTAGGACCTGCAAGAAGTAA+AGG + chr2_4:20013617-20013636 None:intergenic 45.0%
TTCTTGCAGGTCCTAGTAAC+TGG - chr2_4:20013621-20013640 Msa0319930:intron 45.0%
TTCACGAATCCAGGAGAATG+CGG + chr2_4:20013762-20013781 None:intergenic 45.0%
! GGTATTTTTCGCTTGCGGAA+AGG + chr2_4:20014081-20014100 None:intergenic 45.0%
! CAAACTCAGGGAATGGCTTT+TGG - chr2_4:20014124-20014143 Msa0319930:intron 45.0%
CTGGATTTCCGCGACAAATT+TGG - chr2_4:20014269-20014288 Msa0319930:intron 45.0%
CTGTCCATCCAAATTTGTCG+CGG + chr2_4:20014280-20014299 None:intergenic 45.0%
TTGGATGGACAGCTCTTCAT+TGG - chr2_4:20014288-20014307 Msa0319930:intron 45.0%
TGGATGGACAGCTCTTCATT+GGG - chr2_4:20014289-20014308 Msa0319930:intron 45.0%
GCAGTGAGAGTGATACTTAG+GGG + chr2_4:20014423-20014442 None:intergenic 45.0%
GTTGCTACGTTGTTGTCTTG+TGG - chr2_4:20014940-20014959 Msa0319930:intron 45.0%
TTGTGGAGCAAAGCCCAATT+TGG - chr2_4:20014957-20014976 Msa0319930:intron 45.0%
AGTACACTTGGTCCTCTGTA+AGG + chr2_4:20015173-20015192 None:intergenic 45.0%
AGGATACATTGGCAGCTTAC+CGG - chr2_4:20015196-20015215 Msa0319930:intron 45.0%
ACGCATACAAGCAGCGTTTA+GGG - chr2_4:20015239-20015258 Msa0319930:intron 45.0%
TCCAGTACAGATTCCGTTCA+TGG - chr2_4:20015403-20015422 Msa0319930:intron 45.0%
TCCATGAACGGAATCTGTAC+TGG + chr2_4:20015407-20015426 None:intergenic 45.0%
CTCTACGCAACTTCCATGAA+CGG + chr2_4:20015419-20015438 None:intergenic 45.0%
! TTAGAGGCTTTCAAGTGCGT+AGG - chr2_4:20015571-20015590 Msa0319930:intron 45.0%
CGCTTTCTTAGAACGGAACA+TGG + chr2_4:20015808-20015827 None:intergenic 45.0%
! AAGCGCAACAAGAGTATAGC+AGG - chr2_4:20015823-20015842 Msa0319930:intron 45.0%
GATGGCACATAGTCAAGCAA+AGG - chr2_4:20015851-20015870 Msa0319930:intron 45.0%
!!! TAATTTTTTTTTTTTTTTTG+TGG - chr2_4:20010093-20010112 Msa0319930:intron 5.0%
!!! TATTATTTTTATAAACTTTA+GGG + chr2_4:20014454-20014473 None:intergenic 5.0%
!!! TTATTATTTTTATAAACTTT+AGG + chr2_4:20014455-20014474 None:intergenic 5.0%
CTTGCCATAGGCTGTGATGA+TGG - chr2_4:20009908-20009927 Msa0319930:exon 50.0%
TGTGCCATCATCACAGCCTA+TGG + chr2_4:20009915-20009934 None:intergenic 50.0%
! CACCAACCGATTAAGGGTAC+CGG - chr2_4:20010389-20010408 Msa0319930:CDS 50.0%
AACCGGTACCCTTAATCGGT+TGG + chr2_4:20010394-20010413 None:intergenic 50.0%
TCCGAAAAGATGGGCACAAC+TGG - chr2_4:20011294-20011313 Msa0319930:intron 50.0%
TTTCCCCCTGTCAATCAGGT+TGG - chr2_4:20011557-20011576 Msa0319930:intron 50.0%
GGCCGTGTGCATAATATACG+TGG + chr2_4:20011598-20011617 None:intergenic 50.0%
ATTCTAACTCCGCCAGAGTC+TGG - chr2_4:20013164-20013183 Msa0319930:intron 50.0%
TTCTAACTCCGCCAGAGTCT+GGG - chr2_4:20013165-20013184 Msa0319930:intron 50.0%
ACATTACTGCTCCCAGACTC+TGG + chr2_4:20013179-20013198 None:intergenic 50.0%
GTTGACGCCTCTACAGAACA+TGG + chr2_4:20013350-20013369 None:intergenic 50.0%
AGGTTGGAGTTTACCGATGC+TGG - chr2_4:20013730-20013749 Msa0319930:CDS 50.0%
GGTTGGAGTTTACCGATGCT+GGG - chr2_4:20013731-20013750 Msa0319930:CDS 50.0%
AATGCGGCAATACCCAGCAT+CGG + chr2_4:20013746-20013765 None:intergenic 50.0%
! CACTCCGATTTTGCACGATC+CGG - chr2_4:20013842-20013861 Msa0319930:intron 50.0%
GTCTCTTCCATTGAAGCAGC+CGG + chr2_4:20013864-20013883 None:intergenic 50.0%
! TTTTTCGCTTGCGGAAAGGG+AGG + chr2_4:20014077-20014096 None:intergenic 50.0%
GATCCAACTACCGAATACCC+TGG - chr2_4:20014985-20015004 Msa0319930:intron 50.0%
! AGTACAGCCACCAGGGTATT+CGG + chr2_4:20014998-20015017 None:intergenic 50.0%
CACGCATACAAGCAGCGTTT+AGG - chr2_4:20015238-20015257 Msa0319930:intron 50.0%
TAATAGCCTGACGTCGCATG+TGG + chr2_4:20015449-20015468 None:intergenic 50.0%
TCGATGCAGGCTGCATTTAG+AGG - chr2_4:20015555-20015574 Msa0319930:intron 50.0%
AAAAGGTTTCCGTGGGCTTG+AGG - chr2_4:20015662-20015681 Msa0319930:intron 50.0%
GCAGGAAAGCGATGTAGAAG+AGG - chr2_4:20015716-20015735 Msa0319930:intron 50.0%
AGAACGCGTTGAGAGATCTG+TGG - chr2_4:20015770-20015789 Msa0319930:intron 50.0%
CCAAGGTTTCGCCAACATCC+AGG + chr2_4:20010703-20010722 None:intergenic 55.0%
CCTGGATGTTGGCGAAACCT+TGG - chr2_4:20010700-20010719 Msa0319930:CDS 55.0%
GGATGTTGGCGAAACCTTGG+AGG - chr2_4:20010703-20010722 Msa0319930:CDS 55.0%
! GAGTCTGGAGCACATAGTCC+TGG - chr2_4:20011851-20011870 Msa0319930:CDS 55.0%
TTACTGCTCCCAGACTCTGG+CGG + chr2_4:20013176-20013195 None:intergenic 55.0%
CTGCAAGAAGTAAAGGGCCG+TGG + chr2_4:20013610-20013629 None:intergenic 55.0%
CACGGCCCTTTACTTCTTGC+AGG - chr2_4:20013608-20013627 Msa0319930:intron 55.0%
! TGGGTATTGCCGCATTCTCC+TGG - chr2_4:20013750-20013769 Msa0319930:CDS 55.0%
GCAGCCGGATCGTGCAAAAT+CGG + chr2_4:20013849-20013868 None:intergenic 55.0%
TTCGTGGTCAGGCTTGTCAC+TGG - chr2_4:20014250-20014269 Msa0319930:intron 55.0%
! CCACCAGGGTATTCGGTAGT+TGG + chr2_4:20014991-20015010 None:intergenic 55.0%
CCAACTACCGAATACCCTGG+TGG - chr2_4:20014988-20015007 Msa0319930:intron 55.0%
! TTGTATGCGTGCTGCTGCCT+CGG + chr2_4:20015229-20015248 None:intergenic 55.0%
TCTGTACTGGATCCGAGCAG+CGG + chr2_4:20015394-20015413 None:intergenic 55.0%
GTTTCTCCACATGCGACGTC+AGG - chr2_4:20015440-20015459 Msa0319930:intron 55.0%
GCACACGGCCAAGATAACCC+AGG - chr2_4:20011608-20011627 Msa0319930:intron 60.0%
TCACTGAGGTGGCCCCTTCA+TGG - chr2_4:20013465-20013484 Msa0319930:intron 60.0%
CACTGAGGTGGCCCCTTCAT+GGG - chr2_4:20013466-20013485 Msa0319930:intron 60.0%
GCACGATCCGGCTGCTTCAA+TGG - chr2_4:20013854-20013873 Msa0319930:intron 60.0%
CAGCAGCAGTACAGCCACCA+GGG + chr2_4:20015005-20015024 None:intergenic 60.0%
TCAGCAGCAGTACAGCCACC+AGG + chr2_4:20015006-20015025 None:intergenic 60.0%
AGCTTACCGGACAACAGCCG+AGG - chr2_4:20015209-20015228 Msa0319930:intron 60.0%
ATCTGGCGTGCTTCCTCCTC+TGG + chr2_4:20015309-20015328 None:intergenic 60.0%
AAGCAATGGCAGCCGCTGCT+CGG - chr2_4:20015379-20015398 Msa0319930:CDS 60.0%
CCGGATTCACCTCAAGCCCA+CGG + chr2_4:20015674-20015693 None:intergenic 60.0%
CCGTGGGCTTGAGGTGAATC+CGG - chr2_4:20015671-20015690 Msa0319930:intron 60.0%
CTGCTGCCTCGGCTGTTGTC+CGG + chr2_4:20015218-20015237 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 20009565 20016547 20009565 ID=Msa0319930;Name=Msa0319930
chr2_4 mRNA 20009565 20016547 20009565 ID=Msa0319930-mRNA-1;Parent=Msa0319930;Name=Msa0319930-mRNA-1;_AED=0.06;_eAED=0.06;_QI=199|1|1|1|0.92|0.85|14|354|915
chr2_4 exon 20009565 20009984 20009565 ID=Msa0319930-mRNA-1:exon:7423;Parent=Msa0319930-mRNA-1
chr2_4 exon 20010240 20010548 20010240 ID=Msa0319930-mRNA-1:exon:7422;Parent=Msa0319930-mRNA-1
chr2_4 exon 20010636 20011182 20010636 ID=Msa0319930-mRNA-1:exon:7421;Parent=Msa0319930-mRNA-1
chr2_4 exon 20011785 20012482 20011785 ID=Msa0319930-mRNA-1:exon:7420;Parent=Msa0319930-mRNA-1
chr2_4 exon 20012601 20012987 20012601 ID=Msa0319930-mRNA-1:exon:7419;Parent=Msa0319930-mRNA-1
chr2_4 exon 20013119 20013177 20013119 ID=Msa0319930-mRNA-1:exon:7418;Parent=Msa0319930-mRNA-1
chr2_4 exon 20013254 20013370 20013254 ID=Msa0319930-mRNA-1:exon:7417;Parent=Msa0319930-mRNA-1
chr2_4 exon 20013678 20013795 20013678 ID=Msa0319930-mRNA-1:exon:7416;Parent=Msa0319930-mRNA-1
chr2_4 exon 20014216 20014261 20014216 ID=Msa0319930-mRNA-1:exon:7415;Parent=Msa0319930-mRNA-1
chr2_4 exon 20014449 20014537 20014449 ID=Msa0319930-mRNA-1:exon:7414;Parent=Msa0319930-mRNA-1
chr2_4 exon 20014745 20014860 20014745 ID=Msa0319930-mRNA-1:exon:7413;Parent=Msa0319930-mRNA-1
chr2_4 exon 20015288 20015413 20015288 ID=Msa0319930-mRNA-1:exon:7412;Parent=Msa0319930-mRNA-1
chr2_4 exon 20016119 20016248 20016119 ID=Msa0319930-mRNA-1:exon:7411;Parent=Msa0319930-mRNA-1
chr2_4 exon 20016409 20016547 20016409 ID=Msa0319930-mRNA-1:exon:7410;Parent=Msa0319930-mRNA-1
chr2_4 five_prime_UTR 20016409 20016547 20016409 ID=Msa0319930-mRNA-1:five_prime_utr;Parent=Msa0319930-mRNA-1
chr2_4 five_prime_UTR 20016189 20016248 20016189 ID=Msa0319930-mRNA-1:five_prime_utr;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20016119 20016188 20016119 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20015288 20015413 20015288 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20014745 20014860 20014745 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20014449 20014537 20014449 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20014216 20014261 20014216 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20013678 20013795 20013678 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20013254 20013370 20013254 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20013119 20013177 20013119 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20012601 20012987 20012601 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20011785 20012482 20011785 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20010636 20011182 20010636 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20010240 20010548 20010240 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 CDS 20009919 20009984 20009919 ID=Msa0319930-mRNA-1:cds;Parent=Msa0319930-mRNA-1
chr2_4 three_prime_UTR 20009565 20009918 20009565 ID=Msa0319930-mRNA-1:three_prime_utr;Parent=Msa0319930-mRNA-1
Gene Sequence

>Msa0319930

ATGATGGCACAAAACAACTTCACAGGACAACTTGTTGGTTCAGAAATACATGGATTCCATACCTTAAGAGACCTGGATGTTGGCGAAACCTTGGAGGAAGCAAAAAGCAGATGGCTTCGTCCGAATGAGATTCACGCCATACTCAGCAATTACAAATATTTTACTATCCATGTCAAGCCATTGAATTTGCCCAAAAGTGGTACTGTTGTACTATTTGACCGCAAGATGCTTAGGAACTTCCGAAAAGATGGGCACAACTGGAAAAAGAAAAATGACGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAACGAAGAGAGAATCCACGTATATTATGCACACGGCCAAGATAACCCAGGCTTTGTTCGAAGATGTTATTGGTTGCTTGATAAGAGTCTGGAGCACATAGTCCTGGTTCATTATCGTGAAACACAAGAGTCTCAAAGTTCTCCCGTTACACCATTAAATTCAAATGCGAGTCCTATTTCTGATACAACTGCACCATGGATTCTATCAGAAGACTTGGATTCTGGAACCAGCAGTGCTTATACGAATGGTCTTAATGGAAATTTAACAGTCAGAAGTCATGAACAGAAGCTTCATGAGCTTAATACACTTGATTGGGATGAACTAGTGGCTTCGAATGTTAATACCCCTACTATACAAAATGGAGGAAACGAACCGCGTTACTATCAACTAAATCAAAGCTTACCGAATGGCAGCTTTGACAATGTTGCTGGTAATCCTTCCTCAGAAATTCCTACATATGGTATTCTAACTCCGCCAGAGTCTGGGAGCAGTAATGTTTCTTACTGTTTCCCAGAAAGTGTTAACGATCAAAAGAATCATTCTATGACTCTTGGTGGTGTTGATTCCGTTGACATTTTAGTCAATGAAGGTTTGCAAAGTCAGAATAGCTTTGGAACGTGGATGAACAATGCCATATCTTACACACCATGTTCTGTAGAGGCGTCAACTCTTGAATTGTCAATTCCTTCGTCTGTTACTGATCCATTTTCATCACTGGTGATGGATAATCAACAATCTTCTCTTCCGGAACAAGTATTTCATATCACTGAGGTGGCCCCTTCATGGGTTTCTTCCACTGAGAAAACAAAGGTCCTAGTAACTGGATATTTTCTCTTTGATTATCAACACCTTGCAAAGTCCAATATAATGTGTGTCTGTGGCGAAACAAGTGTTCCTGTAGAAATTGTTCAGGTTGGAGTTTACCGATGCTGGGTATTGCCGCATTCTCCTGGATTCGTGAATCTCTATTTGAGCTTCGATGGCCATAAGCCTATTAGCCAAGTTGTTAATTTTGAATATCGCACTCCGATTTTGCACGATCCGGCTGCTTCAATGGAAGAGACATACAACTGGGTTGAATTTCGTCTTCAAATGAGGCTTTCTCATTTGCTTTTTACAACACCGAAGACCCTTGATGTTTTCTCTAGTGAAGCATCACCTACTGCACTGAAAGAGACTAAAAAATTCGCCTCCAAAACATTATTTCTTTCCAAAAGTTTTATACACTTCATGAAGTCGTCTGACGCAAACGCACCTCCCTTTCCGCAAGCGAAAAATACCTTGTTCGAAATTGCGTTGAAAAACAAACTCAGGGAATGGCTTTTGGAACGTATTGTTTTAGGATGTAAGACTACTGAGTATGATGCACAAGGCCAAAGTGTAATTCATTTGTGTGCAATGTTGGGATATACTTGGGCTATTACTTTGTTTTCGTGGTCAGGCTTGTCACTGGATTTCCGCGACAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATAATGGAATGGAGAATATGGTTGCTACGTTGTTGTCTTGTGGAGCAAAGCCCAATTTGGTGACAGATCCAACTACCGAATACCCTGGTGGCTGTACTGCTGCTGATCTTGCTTATATGAAAGGATATGACGGTTTAGCTGCTTATCTTTCAGAAAAGTGTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGTTCACTCCAAACCACTACAAATGATCCAGTAAATGCTGAGAACCTTACAGAGGACCAAGTGTACTTAAAGGATACATTGGCAGCTTACCGGACAACAGCCGAGGCAGCAGCACGCATACAAGCAGCGTTTAGGGAGCACTCACTAAAATTGCGATATCAGTCGGTTCAATTTATCAGTCCAGAGGAGGAAGCACGCCAGATAGTAGCAGCAATGAAAATTCAACATGCCTTTCGCAACTTTGAGACAAGAAAAGCAATGGCAGCCGCTGCTCGGATCCAGTACAGATTCCGTTCATGGAAGTTGCGTAGAGAGTTTCTCCACATGCGACGTCAGGCTATTAGAATTCAGGCTGCATTTAGAGGCTTTCAAGTGCGTAGGCAATATCGTAAAATTCTATGGTCTGTTGGAATTCTTGAGAAAGTAATCCTGCGTTGGCTTTTAAAGAGAAAAGGTTTCCGTGGGCTTGAGGTGAATCCGGACGAAGACATGAAAGATGAGAAGCAGGAAAGCGATGTAGAAGAGGACTTCTTTAAGACTGGTAGGAAACAAGCGGAAGAACGCGTTGAGAGATCTGTGGTACGCGTACAAGCCATGTTCCGTTCTAAGAAAGCGCAACAAGAGTATAGCAGGATGAAGATGGCACATAGTCAAGCAAAGTTGGAACTTGAATTAGAAGAACTCATCAATTCTGATGTGGACATGTTCACAACAAAGACATCATAA
Protein sequence

>Msa0319930

MMAQNNFTGQLVGSEIHGFHTLRDLDVGETLEEAKSRWLRPNEIHAILSNYKYFTIHVKPLNLPKSGTVVLFDRKMLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPGFVRRCYWLLDKSLEHIVLVHYRETQESQSSPVTPLNSNASPISDTTAPWILSEDLDSGTSSAYTNGLNGNLTVRSHEQKLHELNTLDWDELVASNVNTPTIQNGGNEPRYYQLNQSLPNGSFDNVAGNPSSEIPTYGILTPPESGSSNVSYCFPESVNDQKNHSMTLGGVDSVDILVNEGLQSQNSFGTWMNNAISYTPCSVEASTLELSIPSSVTDPFSSLVMDNQQSSLPEQVFHITEVAPSWVSSTEKTKVLVTGYFLFDYQHLAKSNIMCVCGETSVPVEIVQVGVYRCWVLPHSPGFVNLYLSFDGHKPISQVVNFEYRTPILHDPAASMEETYNWVEFRLQMRLSHLLFTTPKTLDVFSSEASPTALKETKKFASKTLFLSKSFIHFMKSSDANAPPFPQAKNTLFEIALKNKLREWLLERIVLGCKTTEYDAQGQSVIHLCAMLGYTWAITLFSWSGLSLDFRDKFGWTALHWAAYNGMENMVATLLSCGAKPNLVTDPTTEYPGGCTAADLAYMKGYDGLAAYLSEKCLVEQFNDMSLAGNISGSLQTTTNDPVNAENLTEDQVYLKDTLAAYRTTAEAAARIQAAFREHSLKLRYQSVQFISPEEEARQIVAAMKIQHAFRNFETRKAMAAAARIQYRFRSWKLRREFLHMRRQAIRIQAAFRGFQVRRQYRKILWSVGILEKVILRWLLKRKGFRGLEVNPDEDMKDEKQESDVEEDFFKTGRKQAEERVERSVVRVQAMFRSKKAQQEYSRMKMAHSQAKLELELEELINSDVDMFTTKTS*