Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321530 | XP_003595002.1 | 53.333 | 75 | 33 | 1 | 155 | 229 | 19 | 91 | 8.15e-15 | 79.7 |
| Msa0321530 | XP_003595002.1 | 83.333 | 126 | 17 | 1 | 1 | 122 | 5 | 130 | 8.54e-68 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321530 | sp|P11143|HSP70_MAIZE | 87.097 | 31 | 4 | 0 | 123 | 153 | 5 | 35 | 3.10e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0321530 | Msa0947420 | 0.808238 | 3.416674e-50 | -8.615850e-47 |
| Msa0321530 | Msa1062060 | 0.805462 | 1.319538e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321530 | MtrunA17_Chr2g0298321 | 83.333 | 126 | 17 | 1 | 1 | 122 | 5 | 130 | 7.85e-72 | 215 |
| Msa0321530 | MtrunA17_Chr2g0298321 | 53.333 | 75 | 33 | 1 | 155 | 229 | 19 | 91 | 7.50e-19 | 79.7 |
| Msa0321530 | MtrunA17_Chr2g0298331 | 69.291 | 127 | 34 | 2 | 1 | 122 | 5 | 131 | 5.61e-57 | 177 |
| Msa0321530 | MtrunA17_Chr2g0298331 | 53.947 | 76 | 32 | 2 | 155 | 229 | 19 | 92 | 2.66e-18 | 78.2 |
| Msa0321530 | MtrunA17_Chr2g0298361 | 90.411 | 73 | 7 | 0 | 157 | 229 | 21 | 93 | 2.06e-42 | 140 |
| Msa0321530 | MtrunA17_Chr2g0298361 | 47.321 | 112 | 53 | 2 | 18 | 123 | 22 | 133 | 1.36e-26 | 99.8 |
| Msa0321530 | MtrunA17_Chr2g0298341 | 81.579 | 76 | 14 | 0 | 155 | 230 | 15 | 90 | 1.42e-40 | 135 |
| Msa0321530 | MtrunA17_Chr2g0298341 | 46.875 | 128 | 62 | 2 | 1 | 122 | 1 | 128 | 6.03e-35 | 121 |
| Msa0321530 | MtrunA17_Chr2g0298351 | 49.612 | 129 | 59 | 2 | 1 | 123 | 1 | 129 | 1.71e-38 | 130 |
| Msa0321530 | MtrunA17_Chr2g0298351 | 64.474 | 76 | 27 | 0 | 155 | 230 | 15 | 90 | 6.88e-29 | 105 |
| Msa0321530 | MtrunA17_Chr2g0298491 | 52.308 | 130 | 52 | 4 | 1 | 121 | 5 | 133 | 2.41e-34 | 119 |
| Msa0321530 | MtrunA17_Chr2g0299921 | 87.097 | 31 | 4 | 0 | 123 | 153 | 1026 | 1056 | 1.71e-12 | 66.6 |
| Msa0321530 | MtrunA17_Chr7g0223181 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 2.61e-12 | 65.9 |
| Msa0321530 | MtrunA17_Chr4g0031321 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 2.71e-12 | 65.9 |
| Msa0321530 | MtrunA17_Chr4g0031301 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 2.76e-12 | 65.9 |
| Msa0321530 | MtrunA17_Chr7g0223291 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 2.78e-12 | 65.9 |
| Msa0321530 | MtrunA17_Chr7g0262821 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 3.00e-12 | 65.5 |
| Msa0321530 | MtrunA17_Chr2g0299851 | 83.333 | 30 | 5 | 0 | 124 | 153 | 1036 | 1065 | 3.09e-11 | 62.8 |
| Msa0321530 | MtrunA17_Chr4g0073741 | 78.125 | 32 | 7 | 0 | 122 | 153 | 4 | 35 | 3.87e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321530 | AT5G02490.1 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 3.54e-12 | 65.9 |
| Msa0321530 | AT3G09440.1 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 3.81e-12 | 65.9 |
| Msa0321530 | AT3G09440.4 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 3.81e-12 | 65.9 |
| Msa0321530 | AT3G09440.2 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 3.81e-12 | 65.9 |
| Msa0321530 | AT3G09440.3 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 3.81e-12 | 65.9 |
| Msa0321530 | AT5G02500.1 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 3.81e-12 | 65.9 |
| Msa0321530 | AT3G12580.1 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 3.92e-12 | 65.9 |
| Msa0321530 | AT1G56410.1 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 3.93e-12 | 65.9 |
| Msa0321530 | AT5G02500.2 | 87.097 | 31 | 4 | 0 | 123 | 153 | 6 | 36 | 4.02e-12 | 65.5 |
Find 46 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCTGGTAATTGTATTAT+TGG | 0.130178 | 2_4:+22889697 | Msa0321530:CDS |
| ATCTGCAATTGGAATGGATT+TGG | 0.252351 | 2_4:+22890907 | Msa0321530:CDS |
| ACTCCAAATTGTCCTGTTAC+TGG | 0.264283 | 2_4:-22892663 | None:intergenic |
| AGATCAAACTCAACGATTAT+AGG | 0.281966 | 2_4:-22889842 | None:intergenic |
| AACCAAATGTCAAAATCTTT+CGG | 0.331219 | 2_4:+22889017 | None:intergenic |
| CACCTGGTAATTGTATTATT+GGG | 0.347650 | 2_4:+22889698 | Msa0321530:CDS |
| CATCCAGTAACAGGACAATT+TGG | 0.352945 | 2_4:+22892660 | Msa0321530:CDS |
| GGAACAACTTATTCATGTAT+TGG | 0.360093 | 2_4:+22890929 | Msa0321530:CDS |
| TCTTACGAACATCCAGTAAC+AGG | 0.375521 | 2_4:+22892651 | Msa0321530:CDS |
| TCTGCAATTGGAATGGATTT+GGG | 0.376497 | 2_4:+22890908 | Msa0321530:CDS |
| CCATCGCAATGTGAAGCCTT+TGG | 0.396541 | 2_4:+22892573 | Msa0321530:CDS |
| ATATTGGCTTTAGTTGTTGC+AGG | 0.408474 | 2_4:+22892388 | Msa0321530:intron |
| GGAGTTAATCAATGCGATAT+CGG | 0.413022 | 2_4:+22892681 | Msa0321530:CDS |
| AGATATAGTAAAACGGGTGC+TGG | 0.414910 | 2_4:+22889778 | Msa0321530:intron |
| CTTATTCATGTATTGGTGCT+TGG | 0.427471 | 2_4:+22890936 | Msa0321530:CDS |
| GAGTTAATCAATGCGATATC+GGG | 0.448419 | 2_4:+22892682 | Msa0321530:CDS |
| GGAAGAGGCGCTAAACCTAT+AGG | 0.459016 | 2_4:+22892594 | Msa0321530:CDS |
| GTTAGTAGATATAGTAAAAC+GGG | 0.463212 | 2_4:+22889772 | Msa0321530:intron |
| TGTTAGTAGATATAGTAAAA+CGG | 0.463365 | 2_4:+22889771 | Msa0321530:intron |
| AAAGGTGAAGGATCTGCAAT+TGG | 0.465546 | 2_4:+22890896 | Msa0321530:intron |
| GGGAAATTAATACAGGTAGA+AGG | 0.466876 | 2_4:+22889523 | Msa0321530:intron |
| CAATGTGAAGCCTTTGGAAG+AGG | 0.468184 | 2_4:+22892579 | Msa0321530:CDS |
| TGGTAATTGTATTATTGGGA+TGG | 0.490985 | 2_4:+22889702 | Msa0321530:CDS |
| AAGTCACAACTCGATCCTAT+AGG | 0.502354 | 2_4:-22892609 | None:intergenic |
| AAGATGATTGTTGCAACAAA+AGG | 0.512720 | 2_4:+22889746 | Msa0321530:CDS |
| GGTAATTGTATTATTGGGAT+GGG | 0.517796 | 2_4:+22889703 | Msa0321530:CDS |
| GAGCACAGGGAAATTAATAC+AGG | 0.528973 | 2_4:+22889516 | Msa0321530:intron |
| TTACCAGGTGGTGTTAATCC+TGG | 0.532855 | 2_4:-22889685 | None:intergenic |
| CACTGTAATTCCTTTGCAAG+AGG | 0.539171 | 2_4:+22889595 | Msa0321530:CDS |
| GTGCAATTAATAGAGGTTGA+AGG | 0.544588 | 2_4:+22892501 | Msa0321530:intron |
| TGAAGGATCTGCAATTGGAA+TGG | 0.560283 | 2_4:+22890901 | Msa0321530:CDS |
| GAGAACAGTGCAATTAATAG+AGG | 0.560640 | 2_4:+22892494 | Msa0321530:intron |
| AGGTTTAGCGCCTCTTCCAA+AGG | 0.563949 | 2_4:-22892589 | None:intergenic |
| GATATAGTAAAACGGGTGCT+GGG | 0.568939 | 2_4:+22889779 | Msa0321530:intron |
| AACACGAACGCCTCTTGCAA+AGG | 0.569144 | 2_4:-22889605 | None:intergenic |
| AATCAATGCGATATCGGGAT+GGG | 0.569192 | 2_4:+22892687 | Msa0321530:CDS |
| CCACCAGGATTAACACCACC+TGG | 0.574460 | 2_4:+22889682 | Msa0321530:CDS |
| TAATCAATGCGATATCGGGA+TGG | 0.575164 | 2_4:+22892686 | Msa0321530:CDS |
| AAGGCAAAGAATCATATCAA+AGG | 0.584033 | 2_4:-22889815 | None:intergenic |
| GGTGGTGTTAATCCTGGTGG+TGG | 0.586369 | 2_4:-22889679 | None:intergenic |
| CCAAAGGCTTCACATTGCGA+TGG | 0.593799 | 2_4:-22892573 | None:intergenic |
| CTCAACGATTATAGGAACAA+AGG | 0.596985 | 2_4:-22889834 | None:intergenic |
| ATCCCAATAATACAATTACC+AGG | 0.640570 | 2_4:-22889700 | None:intergenic |
| CCAGGTGGTGTTAATCCTGG+TGG | 0.659319 | 2_4:-22889682 | None:intergenic |
| AGGTGTTTGCACAAACATTG+TGG | 0.677705 | 2_4:+22892521 | Msa0321530:CDS |
| CCAATAATACAATTACCAGG+TGG | 0.756203 | 2_4:-22889697 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATACAATTCAAATATATTT+TGG | - | chr2_4:22889350-22889369 | None:intergenic | 10.0% |
| !! | TTATTACAAAATATTCTATT+CGG | - | chr2_4:22889969-22889988 | None:intergenic | 10.0% |
| !! | TGTAAAAAAATACATTAAAA+AGG | - | chr2_4:22890270-22890289 | None:intergenic | 10.0% |
| !! | TAAACAAAATATAAAAGATT+AGG | + | chr2_4:22890327-22890346 | Msa0321530:intron | 10.0% |
| !! | AAACTATAATATAAAATAAG+AGG | + | chr2_4:22890446-22890465 | Msa0321530:intron | 10.0% |
| !! | AACTATAATATAAAATAAGA+GGG | + | chr2_4:22890447-22890466 | Msa0321530:intron | 10.0% |
| !!! | TTAATTTCAATATTGATTAA+TGG | - | chr2_4:22891394-22891413 | None:intergenic | 10.0% |
| !! | TTAATCAATATTGAAATTAA+AGG | + | chr2_4:22891394-22891413 | Msa0321530:intron | 10.0% |
| !! | TGTATATTAATAGAAAAATA+GGG | - | chr2_4:22891868-22891887 | None:intergenic | 10.0% |
| !! | TTGTATATTAATAGAAAAAT+AGG | - | chr2_4:22891869-22891888 | None:intergenic | 10.0% |
| !! | ATTTATTATTTAAAAAAGCA+TGG | - | chr2_4:22892434-22892453 | None:intergenic | 10.0% |
| !!! | ATTTGAAATTTATGTGATAA+TGG | - | chr2_4:22889091-22889110 | None:intergenic | 15.0% |
| !! | AAAATATTAGGTTAAGAATT+AGG | + | chr2_4:22889160-22889179 | Msa0321530:intron | 15.0% |
| !!! | ATTAAATAATCTTTTACGTA+CGG | - | chr2_4:22889266-22889285 | None:intergenic | 15.0% |
| !! | ATTTATGAATTATTGAGATT+AGG | - | chr2_4:22889302-22889321 | None:intergenic | 15.0% |
| !! | ATTTAACAACTATATGATAA+TGG | - | chr2_4:22889450-22889469 | None:intergenic | 15.0% |
| !!! | TAATTAGTTTCTTGTAATTA+TGG | + | chr2_4:22889986-22890005 | Msa0321530:intron | 15.0% |
| !! | TATGTATATATTCTATTCAT+AGG | + | chr2_4:22890051-22890070 | Msa0321530:intron | 15.0% |
| !! | ATGTATATATTCTATTCATA+GGG | + | chr2_4:22890052-22890071 | Msa0321530:intron | 15.0% |
| !!! | ACAAAACAAAGTTTTTTTTT+TGG | - | chr2_4:22890232-22890251 | None:intergenic | 15.0% |
| !! | ACTATAATATAAAATAAGAG+GGG | + | chr2_4:22890448-22890467 | Msa0321530:intron | 15.0% |
| !! | TTAATCAATATTGGAATTAA+AGG | - | chr2_4:22890522-22890541 | None:intergenic | 15.0% |
| !!! | TTAATTCCAATATTGATTAA+TGG | + | chr2_4:22890522-22890541 | Msa0321530:intron | 15.0% |
| !!! | TTAATTGTTTTGTTATTTTG+TGG | - | chr2_4:22890602-22890621 | None:intergenic | 15.0% |
| !! | AATGATAAAAAGATATGTAT+TGG | + | chr2_4:22891989-22892008 | Msa0321530:intron | 15.0% |
| !!! | TTTTTTACCAAAACAATTAT+TGG | + | chr2_4:22892157-22892176 | Msa0321530:intron | 15.0% |
| !! | ATTTATAAGTCATTGAAATT+AGG | - | chr2_4:22892247-22892266 | None:intergenic | 15.0% |
| !! | TAACATCCTTAAAAAAAAAA+TGG | + | chr2_4:22892287-22892306 | Msa0321530:intron | 15.0% |
| !! | TGAAACAAATACAATAATTA+AGG | + | chr2_4:22892856-22892875 | Msa0321530:intron | 15.0% |
| !! | TTAATTTATTGCTTAAAATG+TGG | + | chr2_4:22892950-22892969 | Msa0321530:intron | 15.0% |
| !! | AGAAATTAATGCTTGAATAT+TGG | + | chr2_4:22889133-22889152 | Msa0321530:intron | 20.0% |
| !! | TGTTAGTAGATATAGTAAAA+CGG | + | chr2_4:22889771-22889790 | Msa0321530:intron | 20.0% |
| !!! | AAACAAAGTTTTTTTTTTGG+CGG | - | chr2_4:22890229-22890248 | None:intergenic | 20.0% |
| !! | TTGACTGAGAATTAAATTAA+AGG | - | chr2_4:22890570-22890589 | None:intergenic | 20.0% |
| !!! | GAAAATTTGTTGAAACATTA+TGG | + | chr2_4:22890868-22890887 | Msa0321530:intron | 20.0% |
| !! | TCACACAAAAAAAATAATTG+CGG | - | chr2_4:22891217-22891236 | None:intergenic | 20.0% |
| !!! | TTGGTTGTTGAATTTATTTT+AGG | - | chr2_4:22891485-22891504 | None:intergenic | 20.0% |
| !!! | AATGATACACATTTTCAAAT+AGG | - | chr2_4:22891828-22891847 | None:intergenic | 20.0% |
| !!! | TCAAAATTTGCTTACATTTT+GGG | - | chr2_4:22892074-22892093 | None:intergenic | 20.0% |
| !! | ACAACTAAAGTTAATGTATT+TGG | - | chr2_4:22892098-22892117 | None:intergenic | 20.0% |
| !! | CCAAAAATAGAAGTAAAATT+TGG | - | chr2_4:22892121-22892140 | None:intergenic | 20.0% |
| !!! | CCAAATTTTACTTCTATTTT+TGG | + | chr2_4:22892118-22892137 | Msa0321530:intron | 20.0% |
| !!! | ATTTTACTTCTATTTTTGGA+CGG | + | chr2_4:22892122-22892141 | Msa0321530:intron | 20.0% |
| !!! | AGACAAAAAACTTTTTGATT+TGG | + | chr2_4:22892190-22892209 | Msa0321530:intron | 20.0% |
| !! | TAAATACACAGATTTAACAT+TGG | + | chr2_4:22892262-22892281 | Msa0321530:intron | 20.0% |
| !!! | GTTACTCCATTTTTTTTTTA+AGG | - | chr2_4:22892296-22892315 | None:intergenic | 20.0% |
| !!! | AACCAAATGTCAAAATATTT+TGG | + | chr2_4:22892355-22892374 | Msa0321530:intron | 20.0% |
| !!! | AACCAAAATATTTTGACATT+TGG | - | chr2_4:22892360-22892379 | None:intergenic | 20.0% |
| !! | TAACGTATAATTTCTATTAG+CGG | - | chr2_4:22892921-22892940 | None:intergenic | 20.0% |
| !! | CAATAAATTCTTACCATTAA+TGG | + | chr2_4:22892989-22893008 | Msa0321530:intron | 20.0% |
| !! | TAATAAAACGATGTGTTTAA+AGG | - | chr2_4:22893108-22893127 | None:intergenic | 20.0% |
| !!! | CTTTTGTTTTTTTTTGACAA+GGG | - | chr2_4:22893200-22893219 | None:intergenic | 20.0% |
| !!! | TCTTTTGTTTTTTTTTGACA+AGG | - | chr2_4:22893201-22893220 | None:intergenic | 20.0% |
| !!! | TGAAATTTATGTGATAATGG+TGG | - | chr2_4:22889088-22889107 | None:intergenic | 25.0% |
| ! | TTTCAAATGAACTTCTGATT+AGG | + | chr2_4:22889103-22889122 | Msa0321530:intron | 25.0% |
| ! | AATTAATGCTTGAATATTGG+AGG | + | chr2_4:22889136-22889155 | Msa0321530:intron | 25.0% |
| ! | ATTAATGCTTGAATATTGGA+GGG | + | chr2_4:22889137-22889156 | Msa0321530:intron | 25.0% |
| ! | AATATTGGAGGGAAAATATT+AGG | + | chr2_4:22889148-22889167 | Msa0321530:intron | 25.0% |
| ! | TGAATTATTGAGATTAGGAT+AGG | - | chr2_4:22889297-22889316 | None:intergenic | 25.0% |
| ! | CATAAATAGACACTCAATAT+TGG | + | chr2_4:22889315-22889334 | Msa0321530:intron | 25.0% |
| ! | AATAGAAAGATGTTGACATT+TGG | - | chr2_4:22889381-22889400 | None:intergenic | 25.0% |
| !!! | TAACAACTATATGATAATGG+TGG | - | chr2_4:22889447-22889466 | None:intergenic | 25.0% |
| ! | GTTAGTAGATATAGTAAAAC+GGG | + | chr2_4:22889772-22889791 | Msa0321530:intron | 25.0% |
| !! | AGAATACATTTGAAATAGCT+AGG | - | chr2_4:22889901-22889920 | None:intergenic | 25.0% |
| ! | TACAAAATATTCTATTCGGT+TGG | - | chr2_4:22889965-22889984 | None:intergenic | 25.0% |
| ! | ATATATTCTATTCATAGGGA+TGG | + | chr2_4:22890056-22890075 | Msa0321530:intron | 25.0% |
| !!! | AACAAAGTTTTTTTTTTGGC+GGG | - | chr2_4:22890228-22890247 | None:intergenic | 25.0% |
| !!! | TTAGGCATTGAATAATTTTG+TGG | + | chr2_4:22890345-22890364 | Msa0321530:intron | 25.0% |
| ! | GAACTTAACATCATACTATA+AGG | + | chr2_4:22890402-22890421 | Msa0321530:intron | 25.0% |
| ! | CATCATACTATAAGGAAAAT+CGG | + | chr2_4:22890410-22890429 | Msa0321530:intron | 25.0% |
| !! | TAAGTTAACACACTAACTTT+TGG | - | chr2_4:22890486-22890505 | None:intergenic | 25.0% |
| ! | TCTAAGCCATTAATCAATAT+TGG | - | chr2_4:22891385-22891404 | None:intergenic | 25.0% |
| ! | AAAAAATTAGGGTTTGAATG+GGG | - | chr2_4:22890838-22890857 | None:intergenic | 25.0% |
| ! | GAAAAAATTAGGGTTTGAAT+GGG | - | chr2_4:22890839-22890858 | None:intergenic | 25.0% |
| ! | AATAAATTCCAACATCGTAA+TGG | + | chr2_4:22891040-22891059 | Msa0321530:intron | 25.0% |
| ! | TGTGAGAAAAAAAAAGTGAA+GGG | + | chr2_4:22891100-22891119 | Msa0321530:intron | 25.0% |
| ! | TGTGAGAAAAAAAAAGTGAA+GGG | + | chr2_4:22891100-22891119 | Msa0321530:intron | 25.0% |
| ! | CTTAGATTAAGTGATATGAT+AGG | - | chr2_4:22891371-22891390 | None:intergenic | 25.0% |
| ! | TAAGTTAACACACTTATTCT+TGG | + | chr2_4:22891430-22891449 | Msa0321530:intron | 25.0% |
| !!! | TTAGGATTTGTTTTATGAGT+GGG | - | chr2_4:22891467-22891486 | None:intergenic | 25.0% |
| !!! | TTTAGGATTTGTTTTATGAG+TGG | - | chr2_4:22891468-22891487 | None:intergenic | 25.0% |
| !!! | TTATCCTTTTGGATTGATTT+TGG | - | chr2_4:22891504-22891523 | None:intergenic | 25.0% |
| !!! | GAGACTTATTTTTATCCTTT+TGG | - | chr2_4:22891515-22891534 | None:intergenic | 25.0% |
| ! | AAAATAAGTCTCTACATAGA+AGG | + | chr2_4:22891523-22891542 | Msa0321530:intron | 25.0% |
| ! | AACAAATAAAACTACAGAAG+AGG | - | chr2_4:22891730-22891749 | None:intergenic | 25.0% |
| ! | GTTATTATGTGTATGTCATT+GGG | - | chr2_4:22891776-22891795 | None:intergenic | 25.0% |
| ! | AGTTATTATGTGTATGTCAT+TGG | - | chr2_4:22891777-22891796 | None:intergenic | 25.0% |
| ! | ATAGGTCATCTAATATAAGA+CGG | - | chr2_4:22891810-22891829 | None:intergenic | 25.0% |
| !! | TCAACCATGTCATTTAATAT+GGG | + | chr2_4:22892026-22892045 | Msa0321530:intron | 25.0% |
| !!! | CTCAAAATTTGCTTACATTT+TGG | - | chr2_4:22892075-22892094 | None:intergenic | 25.0% |
| !! | GACTAAACCAATAATTGTTT+TGG | - | chr2_4:22892167-22892186 | None:intergenic | 25.0% |
| !! | GGAATGATTGTTGTTATAAA+AGG | + | chr2_4:22892730-22892749 | Msa0321530:intron | 25.0% |
| ! | AACGTATAATTTCTATTAGC+GGG | - | chr2_4:22892920-22892939 | None:intergenic | 25.0% |
| ! | CATGTTAAACATTCCATTAA+TGG | - | chr2_4:22893005-22893024 | None:intergenic | 25.0% |
| ! | ATGGGAATGCATATTATTTA+GGG | - | chr2_4:22893057-22893076 | None:intergenic | 25.0% |
| ! | CATAAGAATACATTTGACAT+GGG | - | chr2_4:22893075-22893094 | None:intergenic | 25.0% |
| ! | TCATAAGAATACATTTGACA+TGG | - | chr2_4:22893076-22893095 | None:intergenic | 25.0% |
| ! | TCTTACTCATATACTAAGTT+GGG | - | chr2_4:22893370-22893389 | None:intergenic | 25.0% |
| ! | TTTCGGTTTCTTTGCATTTT+TGG | + | chr2_4:22889034-22889053 | Msa0321530:CDS | 30.0% |
| ! | CTTTAGAAAGAAAGATAGTC+AGG | + | chr2_4:22889208-22889227 | Msa0321530:intron | 30.0% |
| TGCAACAACTAAAATCAAGA+TGG | - | chr2_4:22889410-22889429 | None:intergenic | 30.0% | |
| !!! | ATCTTGATTTTAGTTGTTGC+AGG | + | chr2_4:22889409-22889428 | Msa0321530:intron | 30.0% |
| CACCTGGTAATTGTATTATT+GGG | + | chr2_4:22889698-22889717 | Msa0321530:CDS | 30.0% | |
| ATCCCAATAATACAATTACC+AGG | - | chr2_4:22889703-22889722 | None:intergenic | 30.0% | |
| TGGTAATTGTATTATTGGGA+TGG | + | chr2_4:22889702-22889721 | Msa0321530:CDS | 30.0% | |
| GGTAATTGTATTATTGGGAT+GGG | + | chr2_4:22889703-22889722 | Msa0321530:CDS | 30.0% | |
| AAGATGATTGTTGCAACAAA+AGG | + | chr2_4:22889746-22889765 | Msa0321530:CDS | 30.0% | |
| AAGGCAAAGAATCATATCAA+AGG | - | chr2_4:22889818-22889837 | None:intergenic | 30.0% | |
| AGATCAAACTCAACGATTAT+AGG | - | chr2_4:22889845-22889864 | None:intergenic | 30.0% | |
| ATCGTTGAGTTTGATCTTAA+AGG | + | chr2_4:22889848-22889867 | Msa0321530:intron | 30.0% | |
| TGGAATTAAAGGTCATGATT+TGG | - | chr2_4:22890511-22890530 | None:intergenic | 30.0% | |
| ATGGCTTAGATTCATTGATA+TGG | + | chr2_4:22890541-22890560 | Msa0321530:intron | 30.0% | |
| !!! | TTGTTATTTTGTGGTGATGA+GGG | - | chr2_4:22890593-22890612 | None:intergenic | 30.0% |
| !!! | TTTGTTATTTTGTGGTGATG+AGG | - | chr2_4:22890594-22890613 | None:intergenic | 30.0% |
| ACGCTAAAGAAAATTGCATA+TGG | + | chr2_4:22890675-22890694 | Msa0321530:intron | 30.0% | |
| AACTCATTCAGTTTCAAAGA+AGG | + | chr2_4:22890747-22890766 | Msa0321530:intron | 30.0% | |
| CGAAAAAATTAGGGTTTGAA+TGG | - | chr2_4:22890840-22890859 | None:intergenic | 30.0% | |
| !!! | TCAAACCCTAATTTTTTCGT+TGG | + | chr2_4:22890841-22890860 | Msa0321530:intron | 30.0% |
| !!! | CAAACCCTAATTTTTTCGTT+GGG | + | chr2_4:22890842-22890861 | Msa0321530:intron | 30.0% |
| ! | ATTTGTTGAAACATTATGGC+TGG | + | chr2_4:22890872-22890891 | Msa0321530:intron | 30.0% |
| GGAACAACTTATTCATGTAT+TGG | + | chr2_4:22890929-22890948 | Msa0321530:CDS | 30.0% | |
| AACATAACTACTCCTTCATA+TGG | + | chr2_4:22890998-22891017 | Msa0321530:intron | 30.0% | |
| CACCAAAAAAAAATTGCACA+TGG | - | chr2_4:22891082-22891101 | None:intergenic | 30.0% | |
| GTGTGAGAAAAAAAAAGTGA+AGG | + | chr2_4:22891099-22891118 | Msa0321530:intron | 30.0% | |
| GTGTGAGAAAAAAAAAGTGA+AGG | + | chr2_4:22891099-22891118 | Msa0321530:intron | 30.0% | |
| ! | GCTTTAAGTTCATTCTCTAT+TGG | - | chr2_4:22891349-22891368 | None:intergenic | 30.0% |
| ACAACCAAAATCAATCCAAA+AGG | + | chr2_4:22891497-22891516 | Msa0321530:intron | 30.0% | |
| ! | ACTAAGTTTTCATAGCATCA+TGG | - | chr2_4:22891646-22891665 | None:intergenic | 30.0% |
| ATGATGCTATGAAAACTTAG+TGG | + | chr2_4:22891645-22891664 | Msa0321530:intron | 30.0% | |
| TGATGCTATGAAAACTTAGT+GGG | + | chr2_4:22891646-22891665 | Msa0321530:intron | 30.0% | |
| TACATACATATAAGCAGTGA+CGG | - | chr2_4:22891703-22891722 | None:intergenic | 30.0% | |
| ! | GTCAACCATGTCATTTAATA+TGG | + | chr2_4:22892025-22892044 | Msa0321530:intron | 30.0% |
| !! | AATTTGCTTACATTTTGGGA+CGG | - | chr2_4:22892070-22892089 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTCTTTGCCATAT+TGG | + | chr2_4:22892372-22892391 | Msa0321530:intron | 30.0% |
| TGAAAGCAAATATCCTAAGT+CGG | + | chr2_4:22892755-22892774 | Msa0321530:intron | 30.0% | |
| CATGGGAATGCATATTATTT+AGG | - | chr2_4:22893058-22893077 | None:intergenic | 30.0% | |
| ! | CAAAAGATTTTACCCAAAGA+TGG | + | chr2_4:22893214-22893233 | Msa0321530:intron | 30.0% |
| TGAGTATCTTTACCATCTTT+GGG | - | chr2_4:22893229-22893248 | None:intergenic | 30.0% | |
| CTCTTACTCATATACTAAGT+TGG | - | chr2_4:22893371-22893390 | None:intergenic | 30.0% | |
| TTAGTATATGAGTAAGAGTG+AGG | + | chr2_4:22893373-22893392 | Msa0321530:intron | 30.0% | |
| AAGTAATTGGACCTAATTTG+TGG | + | chr2_4:22893534-22893553 | Msa0321530:intron | 30.0% | |
| !!! | TTTTTGGCTTTAGTTGTTGC+AGG | + | chr2_4:22889050-22889069 | Msa0321530:CDS | 35.0% |
| TATTGAGATTAGGATAGGCA+TGG | - | chr2_4:22889292-22889311 | None:intergenic | 35.0% | |
| ! | TTTAAATTTTGTCCGAGCAC+AGG | + | chr2_4:22889502-22889521 | Msa0321530:intron | 35.0% |
| ! | TTAAATTTTGTCCGAGCACA+GGG | + | chr2_4:22889503-22889522 | Msa0321530:intron | 35.0% |
| TGTATTAATTTCCCTGTGCT+CGG | - | chr2_4:22889517-22889536 | None:intergenic | 35.0% | |
| GGGAAATTAATACAGGTAGA+AGG | + | chr2_4:22889523-22889542 | Msa0321530:intron | 35.0% | |
| GGTGAATGCACAAAAATTGT+TGG | + | chr2_4:22889544-22889563 | Msa0321530:CDS | 35.0% | |
| CCAATAATACAATTACCAGG+TGG | - | chr2_4:22889700-22889719 | None:intergenic | 35.0% | |
| CCACCTGGTAATTGTATTAT+TGG | + | chr2_4:22889697-22889716 | Msa0321530:CDS | 35.0% | |
| CTCAACGATTATAGGAACAA+AGG | - | chr2_4:22889837-22889856 | None:intergenic | 35.0% | |
| TTAAGCAGCCTTAAATGGAA+CGG | - | chr2_4:22890111-22890130 | None:intergenic | 35.0% | |
| ! | CCATTTAAGGCTGCTTAAAA+CGG | + | chr2_4:22890113-22890132 | Msa0321530:intron | 35.0% |
| ! | CATTTAAGGCTGCTTAAAAC+GGG | + | chr2_4:22890114-22890133 | Msa0321530:intron | 35.0% |
| CTCGATCACGTAATTTAACT+CGG | - | chr2_4:22890150-22890169 | None:intergenic | 35.0% | |
| TTAGCGTGAGGAAAAAAGAA+GGG | - | chr2_4:22890662-22890681 | None:intergenic | 35.0% | |
| TTTAGCGTGAGGAAAAAAGA+AGG | - | chr2_4:22890663-22890682 | None:intergenic | 35.0% | |
| ! | ATGCAATTTTCTTTAGCGTG+AGG | - | chr2_4:22890674-22890693 | None:intergenic | 35.0% |
| ATGGGGAATAGAGAAAACTA+GGG | - | chr2_4:22890821-22890840 | None:intergenic | 35.0% | |
| AATGGGGAATAGAGAAAACT+AGG | - | chr2_4:22890822-22890841 | None:intergenic | 35.0% | |
| CCTTCCCAACGAAAAAATTA+GGG | - | chr2_4:22890849-22890868 | None:intergenic | 35.0% | |
| TCCTTCCCAACGAAAAAATT+AGG | - | chr2_4:22890850-22890869 | None:intergenic | 35.0% | |
| TGAAACATTATGGCTGGAAA+AGG | + | chr2_4:22890878-22890897 | Msa0321530:intron | 35.0% | |
| ! | ATCTGCAATTGGAATGGATT+TGG | + | chr2_4:22890907-22890926 | Msa0321530:CDS | 35.0% |
| ! | TCTGCAATTGGAATGGATTT+GGG | + | chr2_4:22890908-22890927 | Msa0321530:CDS | 35.0% |
| ! | CTTATTCATGTATTGGTGCT+TGG | + | chr2_4:22890936-22890955 | Msa0321530:CDS | 35.0% |
| GTAATGGTATACGCAATTTG+TGG | + | chr2_4:22891056-22891075 | Msa0321530:intron | 35.0% | |
| !!! | GGCCATGTGCAATTTTTTTT+TGG | + | chr2_4:22891077-22891096 | Msa0321530:intron | 35.0% |
| GATGCTATGAAAACTTAGTG+GGG | + | chr2_4:22891647-22891666 | Msa0321530:intron | 35.0% | |
| ATGCTATGAAAACTTAGTGG+GGG | + | chr2_4:22891648-22891667 | Msa0321530:intron | 35.0% | |
| AGCCACATATATCACTTTGT+GGG | - | chr2_4:22891680-22891699 | None:intergenic | 35.0% | |
| ! | CCATGTCATTTAATATGGGA+CGG | + | chr2_4:22892030-22892049 | Msa0321530:intron | 35.0% |
| !!! | TTACTTCTATTTTTGGACGG+AGG | + | chr2_4:22892125-22892144 | Msa0321530:intron | 35.0% |
| !!! | TACTTCTATTTTTGGACGGA+GGG | + | chr2_4:22892126-22892145 | Msa0321530:intron | 35.0% |
| TGCAACAACTAAAGCCAATA+TGG | - | chr2_4:22892389-22892408 | None:intergenic | 35.0% | |
| !! | ATATTGGCTTTAGTTGTTGC+AGG | + | chr2_4:22892388-22892407 | Msa0321530:intron | 35.0% |
| GAGAACAGTGCAATTAATAG+AGG | + | chr2_4:22892494-22892513 | Msa0321530:intron | 35.0% | |
| GTGCAATTAATAGAGGTTGA+AGG | + | chr2_4:22892501-22892520 | Msa0321530:intron | 35.0% | |
| GGAGTTAATCAATGCGATAT+CGG | + | chr2_4:22892681-22892700 | Msa0321530:CDS | 35.0% | |
| GAGTTAATCAATGCGATATC+GGG | + | chr2_4:22892682-22892701 | Msa0321530:CDS | 35.0% | |
| GAAAGCAAATATCCTAAGTC+GGG | + | chr2_4:22892756-22892775 | Msa0321530:intron | 35.0% | |
| ATTGCTCTTGTACCTATAGA+CGG | + | chr2_4:22892814-22892833 | Msa0321530:intron | 35.0% | |
| ! | AAATTCTAACTTGTGCCCTT+AGG | + | chr2_4:22892879-22892898 | Msa0321530:intron | 35.0% |
| ! | AATTCTAACTTGTGCCCTTA+GGG | + | chr2_4:22892880-22892899 | Msa0321530:intron | 35.0% |
| ATTCTTAACATGCACCCTAA+GGG | - | chr2_4:22892897-22892916 | None:intergenic | 35.0% | |
| !! | GTTAACTTGTGTCCTTTGAA+GGG | - | chr2_4:22893030-22893049 | None:intergenic | 35.0% |
| !! | TGTTAACTTGTGTCCTTTGA+AGG | - | chr2_4:22893031-22893050 | None:intergenic | 35.0% |
| GTGAGTATCTTTACCATCTT+TGG | - | chr2_4:22893230-22893249 | None:intergenic | 35.0% | |
| GATGGTAAAGATACTCACAA+TGG | + | chr2_4:22893232-22893251 | Msa0321530:intron | 35.0% | |
| TCTCCTCGATCCTATATAAT+GGG | - | chr2_4:22893420-22893439 | None:intergenic | 35.0% | |
| TTGTTGGGACTCTAAGTAAT+TGG | + | chr2_4:22893521-22893540 | Msa0321530:intron | 35.0% | |
| ! | AATTGGACCTAATTTGTGGT+AGG | + | chr2_4:22893538-22893557 | Msa0321530:intron | 35.0% |
| GAGCACAGGGAAATTAATAC+AGG | + | chr2_4:22889516-22889535 | Msa0321530:intron | 40.0% | |
| CACTGTAATTCCTTTGCAAG+AGG | + | chr2_4:22889595-22889614 | Msa0321530:CDS | 40.0% | |
| AGATATAGTAAAACGGGTGC+TGG | + | chr2_4:22889778-22889797 | Msa0321530:intron | 40.0% | |
| GATATAGTAAAACGGGTGCT+GGG | + | chr2_4:22889779-22889798 | Msa0321530:intron | 40.0% | |
| TATTCATAGGGATGGCAAAG+CGG | + | chr2_4:22890064-22890083 | Msa0321530:intron | 40.0% | |
| TAAGCAGCCTTAAATGGAAC+GGG | - | chr2_4:22890110-22890129 | None:intergenic | 40.0% | |
| !! | CCGTTTTAAGCAGCCTTAAA+TGG | - | chr2_4:22890116-22890135 | None:intergenic | 40.0% |
| GTTTGTTCGCCATTAAACAG+GGG | - | chr2_4:22890190-22890209 | None:intergenic | 40.0% | |
| CGTTTGTTCGCCATTAAACA+GGG | - | chr2_4:22890191-22890210 | None:intergenic | 40.0% | |
| TCGTTTGTTCGCCATTAAAC+AGG | - | chr2_4:22890192-22890211 | None:intergenic | 40.0% | |
| TTAATGGCGAACAAACGAGT+TGG | + | chr2_4:22890194-22890213 | Msa0321530:intron | 40.0% | |
| !!! | CCCTAATTTTTTCGTTGGGA+AGG | + | chr2_4:22890846-22890865 | Msa0321530:intron | 40.0% |
| ATTATGGCTGGAAAAGGTGA+AGG | + | chr2_4:22890884-22890903 | Msa0321530:intron | 40.0% | |
| AAAGGTGAAGGATCTGCAAT+TGG | + | chr2_4:22890896-22890915 | Msa0321530:intron | 40.0% | |
| TGAAGGATCTGCAATTGGAA+TGG | + | chr2_4:22890901-22890920 | Msa0321530:CDS | 40.0% | |
| TCACACAGTATGCCATATGA+AGG | - | chr2_4:22891013-22891032 | None:intergenic | 40.0% | |
| TGCGTATACCATTACGATGT+TGG | - | chr2_4:22891051-22891070 | None:intergenic | 40.0% | |
| AGCCCACAAAGTGATATATG+TGG | + | chr2_4:22891675-22891694 | Msa0321530:intron | 40.0% | |
| GAGCCACATATATCACTTTG+TGG | - | chr2_4:22891681-22891700 | None:intergenic | 40.0% | |
| CCGTCCCATATTAAATGACA+TGG | - | chr2_4:22892033-22892052 | None:intergenic | 40.0% | |
| ! | TGTCATTTAATATGGGACGG+AGG | + | chr2_4:22892033-22892052 | Msa0321530:intron | 40.0% |
| GTCATTTAATATGGGACGGA+GGG | + | chr2_4:22892034-22892053 | Msa0321530:intron | 40.0% | |
| AGGTGTTTGCACAAACATTG+TGG | + | chr2_4:22892521-22892540 | Msa0321530:CDS | 40.0% | |
| AAGTCACAACTCGATCCTAT+AGG | - | chr2_4:22892612-22892631 | None:intergenic | 40.0% | |
| TCTTACGAACATCCAGTAAC+AGG | + | chr2_4:22892651-22892670 | Msa0321530:CDS | 40.0% | |
| CATCCAGTAACAGGACAATT+TGG | + | chr2_4:22892660-22892679 | Msa0321530:CDS | 40.0% | |
| ACTCCAAATTGTCCTGTTAC+TGG | - | chr2_4:22892666-22892685 | None:intergenic | 40.0% | |
| TAATCAATGCGATATCGGGA+TGG | + | chr2_4:22892686-22892705 | Msa0321530:CDS | 40.0% | |
| AATCAATGCGATATCGGGAT+GGG | + | chr2_4:22892687-22892706 | Msa0321530:CDS | 40.0% | |
| GACTATGCACTAGTGATTGT+AGG | + | chr2_4:22892709-22892728 | Msa0321530:intron | 40.0% | |
| AAATATCCTAAGTCGGGTGT+TGG | + | chr2_4:22892762-22892781 | Msa0321530:intron | 40.0% | |
| AATATCCTAAGTCGGGTGTT+GGG | + | chr2_4:22892763-22892782 | Msa0321530:intron | 40.0% | |
| ATAAACTCAACGCCGTCTAT+AGG | - | chr2_4:22892829-22892848 | None:intergenic | 40.0% | |
| GATTCTTAACATGCACCCTA+AGG | - | chr2_4:22892898-22892917 | None:intergenic | 40.0% | |
| GTTTAACATGTGCCCTTCAA+AGG | + | chr2_4:22893015-22893034 | Msa0321530:intron | 40.0% | |
| GGTAAAGATACTCACAATGG+TGG | + | chr2_4:22893235-22893254 | Msa0321530:intron | 40.0% | |
| AAAGATACTCACAATGGTGG+TGG | + | chr2_4:22893238-22893257 | Msa0321530:intron | 40.0% | |
| GTCTCCTCGATCCTATATAA+TGG | - | chr2_4:22893421-22893440 | None:intergenic | 40.0% | |
| AGGAGACCGTTATGTAGTAA+TGG | + | chr2_4:22893434-22893453 | Msa0321530:intron | 40.0% | |
| AGACCGTTATGTAGTAATGG+CGG | + | chr2_4:22893437-22893456 | Msa0321530:intron | 40.0% | |
| TTCCCGCCATTACTACATAA+CGG | - | chr2_4:22893443-22893462 | None:intergenic | 40.0% | |
| GTTGTTATGTGTCTTCATCC+AGG | + | chr2_4:22893463-22893482 | Msa0321530:intron | 40.0% | |
| ! | AGGGTAGGTTTTCTCTTGTT+GGG | + | chr2_4:22893506-22893525 | Msa0321530:intron | 40.0% |
| ! | TTACCAGGTGGTGTTAATCC+TGG | - | chr2_4:22889688-22889707 | None:intergenic | 45.0% |
| TAAATGGAACGGGGCTAAAC+AGG | - | chr2_4:22890100-22890119 | None:intergenic | 45.0% | |
| GTTTAGCCCCGTTCCATTTA+AGG | + | chr2_4:22890100-22890119 | Msa0321530:intron | 45.0% | |
| AAGCAGCCTTAAATGGAACG+GGG | - | chr2_4:22890109-22890128 | None:intergenic | 45.0% | |
| TCTTGCAAGTTCTGCTGTTG+TGG | - | chr2_4:22890701-22890720 | None:intergenic | 45.0% | |
| ! | CAATGTGAAGCCTTTGGAAG+AGG | + | chr2_4:22892579-22892598 | Msa0321530:CDS | 45.0% |
| ! | ATATCCTAAGTCGGGTGTTG+GGG | + | chr2_4:22892764-22892783 | Msa0321530:intron | 45.0% |
| ! | TGATCGGAGCATCTCTTCTT+CGG | - | chr2_4:22893265-22893284 | None:intergenic | 45.0% |
| AGAAGAGATGCTCCGATCAT+TGG | + | chr2_4:22893266-22893285 | Msa0321530:intron | 45.0% | |
| ! | GGTGACTTATAGAGAGCATG+TGG | + | chr2_4:22893394-22893413 | Msa0321530:intron | 45.0% |
| GAGCATGTGGCCCATTATAT+AGG | + | chr2_4:22893407-22893426 | Msa0321530:intron | 45.0% | |
| TGGCCCATTATATAGGATCG+AGG | + | chr2_4:22893414-22893433 | Msa0321530:intron | 45.0% | |
| GACCGTTATGTAGTAATGGC+GGG | + | chr2_4:22893438-22893457 | Msa0321530:intron | 45.0% | |
| AGAAGAGGATCTGATACCTG+AGG | + | chr2_4:22893486-22893505 | Msa0321530:intron | 45.0% | |
| GAAGAGGATCTGATACCTGA+GGG | + | chr2_4:22893487-22893506 | Msa0321530:intron | 45.0% | |
| ACAAGAGAAAACCTACCCTC+AGG | - | chr2_4:22893505-22893524 | None:intergenic | 45.0% | |
| ! | GAGGGTAGGTTTTCTCTTGT+TGG | + | chr2_4:22893505-22893524 | Msa0321530:intron | 45.0% |
| ! | GACCTAATTTGTGGTAGGCT+TGG | + | chr2_4:22893543-22893562 | Msa0321530:intron | 45.0% |
| AGCCAAGCCTACCACAAATT+AGG | - | chr2_4:22893548-22893567 | None:intergenic | 45.0% | |
| !!! | TTAATTAATTTTTTATTTTG+TGG | + | chr2_4:22891176-22891195 | Msa0321530:intron | 5.0% |
| !!! | TTAATTATTTTTTTATTTTG+TGG | + | chr2_4:22891308-22891327 | Msa0321530:intron | 5.0% |
| !!! | AATATTATATAAAATGTTTT+TGG | + | chr2_4:22891897-22891916 | Msa0321530:intron | 5.0% |
| AACACGAACGCCTCTTGCAA+AGG | - | chr2_4:22889608-22889627 | None:intergenic | 50.0% | |
| !!! | GCAAGAGGCGTTCGTGTTTT+AGG | + | chr2_4:22889610-22889629 | Msa0321530:CDS | 50.0% |
| ! | ACTTTTGATCAGCCACCACC+AGG | + | chr2_4:22889667-22889686 | Msa0321530:CDS | 50.0% |
| TGCACTCCACCCCTGTTTAA+TGG | + | chr2_4:22890178-22890197 | Msa0321530:intron | 50.0% | |
| TGTTCGCCATTAAACAGGGG+TGG | - | chr2_4:22890187-22890206 | None:intergenic | 50.0% | |
| ! | ATGGCGAACAAACGAGTTGG+CGG | + | chr2_4:22890197-22890216 | Msa0321530:intron | 50.0% |
| CCAAAGGCTTCACATTGCGA+TGG | - | chr2_4:22892576-22892595 | None:intergenic | 50.0% | |
| CCATCGCAATGTGAAGCCTT+TGG | + | chr2_4:22892573-22892592 | Msa0321530:CDS | 50.0% | |
| AGGTTTAGCGCCTCTTCCAA+AGG | - | chr2_4:22892592-22892611 | None:intergenic | 50.0% | |
| !! | GGAAGAGGCGCTAAACCTAT+AGG | + | chr2_4:22892594-22892613 | Msa0321530:CDS | 50.0% |
| GGGGATTGTGTGCAAGACTA+TGG | + | chr2_4:22892783-22892802 | Msa0321530:intron | 50.0% | |
| AACCCCGTTGAGGAGAATGT+GGG | + | chr2_4:22893318-22893337 | Msa0321530:intron | 50.0% | |
| ACACCCCACATTCTCCTCAA+CGG | - | chr2_4:22893325-22893344 | None:intergenic | 50.0% | |
| !! | ATGTGGGGTGTTGTACTTGC+AGG | + | chr2_4:22893334-22893353 | Msa0321530:intron | 50.0% |
| GTGTCTTCATCCAGGAGAAG+AGG | + | chr2_4:22893471-22893490 | Msa0321530:intron | 50.0% | |
| GGTATCAGATCCTCTTCTCC+TGG | - | chr2_4:22893484-22893503 | None:intergenic | 50.0% | |
| AGGATCTGATACCTGAGGGT+AGG | + | chr2_4:22893491-22893510 | Msa0321530:intron | 50.0% | |
| ! | GGTGGTGTTAATCCTGGTGG+TGG | - | chr2_4:22889682-22889701 | None:intergenic | 55.0% |
| ! | CCAGGTGGTGTTAATCCTGG+TGG | - | chr2_4:22889685-22889704 | None:intergenic | 55.0% |
| CCACCAGGATTAACACCACC+TGG | + | chr2_4:22889682-22889701 | Msa0321530:CDS | 55.0% | |
| ! | TGGCGAACAAACGAGTTGGC+GGG | + | chr2_4:22890198-22890217 | Msa0321530:intron | 55.0% |
| ! | GAACAAACGAGTTGGCGGGT+CGG | + | chr2_4:22890202-22890221 | Msa0321530:intron | 55.0% |
| CAATCCCCAACACCCGACTT+AGG | - | chr2_4:22892771-22892790 | None:intergenic | 55.0% | |
| GATGCTCCGATCATTGGTCG+TGG | + | chr2_4:22893272-22893291 | Msa0321530:intron | 55.0% | |
| ! | GGAGCACCACGACCAATGAT+CGG | - | chr2_4:22893281-22893300 | None:intergenic | 55.0% |
| GGTTGCGACCACAACATCCT+CGG | - | chr2_4:22893302-22893321 | None:intergenic | 55.0% | |
| CAACCCCGTTGAGGAGAATG+TGG | + | chr2_4:22893317-22893336 | Msa0321530:intron | 55.0% | |
| ACCCCGTTGAGGAGAATGTG+GGG | + | chr2_4:22893319-22893338 | Msa0321530:intron | 55.0% | |
| ACCCCACATTCTCCTCAACG+GGG | - | chr2_4:22893323-22893342 | None:intergenic | 55.0% | |
| CACCCCACATTCTCCTCAAC+GGG | - | chr2_4:22893324-22893343 | None:intergenic | 55.0% | |
| GGAACGGGGCTAAACAGGAC+AGG | - | chr2_4:22890095-22890114 | None:intergenic | 60.0% | |
| TCATTGGTCGTGGTGCTCCG+AGG | + | chr2_4:22893282-22893301 | Msa0321530:intron | 60.0% | |
| GTGGTGCTCCGAGGATGTTG+TGG | + | chr2_4:22893291-22893310 | Msa0321530:intron | 60.0% | |
| TTGTGGTCGCAACCCCGTTG+AGG | + | chr2_4:22893308-22893327 | Msa0321530:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 22889023 | 22893576 | 22889023 | ID=Msa0321530;Name=Msa0321530 |
| chr2_4 | mRNA | 22889023 | 22893576 | 22889023 | ID=Msa0321530-mRNA-1;Parent=Msa0321530;Name=Msa0321530-mRNA-1;_AED=0.20;_eAED=0.21;_QI=0|0|0|0.85|0.16|0.14|7|0|234 |
| chr2_4 | exon | 22889023 | 22889071 | 22889023 | ID=Msa0321530-mRNA-1:exon:8421;Parent=Msa0321530-mRNA-1 |
| chr2_4 | exon | 22889524 | 22889767 | 22889524 | ID=Msa0321530-mRNA-1:exon:8422;Parent=Msa0321530-mRNA-1 |
| chr2_4 | exon | 22889780 | 22889850 | 22889780 | ID=Msa0321530-mRNA-1:exon:8423;Parent=Msa0321530-mRNA-1 |
| chr2_4 | exon | 22890900 | 22890995 | 22890900 | ID=Msa0321530-mRNA-1:exon:8424;Parent=Msa0321530-mRNA-1 |
| chr2_4 | exon | 22892401 | 22892409 | 22892401 | ID=Msa0321530-mRNA-1:exon:8425;Parent=Msa0321530-mRNA-1 |
| chr2_4 | exon | 22892502 | 22892720 | 22892502 | ID=Msa0321530-mRNA-1:exon:8426;Parent=Msa0321530-mRNA-1 |
| chr2_4 | exon | 22893560 | 22893576 | 22893560 | ID=Msa0321530-mRNA-1:exon:8427;Parent=Msa0321530-mRNA-1 |
| chr2_4 | CDS | 22889023 | 22889071 | 22889023 | ID=Msa0321530-mRNA-1:cds;Parent=Msa0321530-mRNA-1 |
| chr2_4 | CDS | 22889524 | 22889767 | 22889524 | ID=Msa0321530-mRNA-1:cds;Parent=Msa0321530-mRNA-1 |
| chr2_4 | CDS | 22889780 | 22889850 | 22889780 | ID=Msa0321530-mRNA-1:cds;Parent=Msa0321530-mRNA-1 |
| chr2_4 | CDS | 22890900 | 22890995 | 22890900 | ID=Msa0321530-mRNA-1:cds;Parent=Msa0321530-mRNA-1 |
| chr2_4 | CDS | 22892401 | 22892409 | 22892401 | ID=Msa0321530-mRNA-1:cds;Parent=Msa0321530-mRNA-1 |
| chr2_4 | CDS | 22892502 | 22892720 | 22892502 | ID=Msa0321530-mRNA-1:cds;Parent=Msa0321530-mRNA-1 |
| chr2_4 | CDS | 22893560 | 22893576 | 22893560 | ID=Msa0321530-mRNA-1:cds;Parent=Msa0321530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
