AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1062060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1062060 MtrunA17_Chr7g0240541 87.054 224 29 0 1 224 1 224 3.79e-145 404
Msa1062060 MtrunA17_Chr7g0240551 85.714 224 32 0 1 224 1 224 1.88e-140 392
Msa1062060 MtrunA17_Chr7g0240531 85.268 224 33 0 1 224 1 224 1.38e-138 387
Msa1062060 MtrunA17_Chr7g0240581 75.446 224 55 0 1 224 1 224 2.45e-123 348
Msa1062060 MtrunA17_Chr7g0240561 75.893 224 54 0 1 224 1 224 1.80e-122 346
Msa1062060 MtrunA17_Chr7g0240511 75.446 224 50 1 1 224 1 219 2.09e-119 338
Msa1062060 MtrunA17_Chr7g0240521 75.111 225 55 1 1 224 8 232 1.03e-110 317
Msa1062060 MtrunA17_Chr7g0240641 67.265 223 73 0 1 223 1 223 2.69e-109 313
Msa1062060 MtrunA17_Chr7g0240631 65.919 223 76 0 1 223 1 223 1.39e-108 311
Msa1062060 MtrunA17_Chr7g0240681 66.222 225 75 1 1 224 1 225 9.25e-105 301
Msa1062060 MtrunA17_Chr7g0240611 65.753 219 71 1 1 219 1 215 1.83e-101 293
Msa1062060 MtrunA17_Chr4g0008791 61.751 217 83 0 1 217 1 217 2.74e-99 288
Msa1062060 MtrunA17_Chr7g0240691 62.557 219 81 1 6 223 36 254 7.43e-98 285
Msa1062060 MtrunA17_Chr4g0008781 60.930 215 82 2 2 215 3 216 4.74e-92 269
Msa1062060 MtrunA17_Chr7g0240671 62.802 207 73 1 8 214 5 207 1.10e-89 263
Msa1062060 MtrunA17_Chr7g0240651 62.500 216 77 1 1 216 1 212 5.44e-85 251
Msa1062060 MtrunA17_Chr7g0240661 63.084 214 75 1 1 214 1 210 8.63e-85 251
Msa1062060 MtrunA17_Chr6g0483141 49.038 208 104 2 7 213 3 209 3.73e-65 201
Msa1062060 MtrunA17_Chr1g0196771 46.262 214 110 3 6 216 2 213 8.51e-62 192
Msa1062060 MtrunA17_Chr3g0132581 47.032 219 114 2 6 223 4 221 2.35e-58 184
Msa1062060 MtrunA17_Chr8g0379581 43.981 216 119 2 4 218 2 216 5.02e-56 177
Msa1062060 MtrunA17_Chr5g0417011 42.342 222 120 3 1 215 1 221 6.36e-56 177
Msa1062060 MtrunA17_Chr4g0029341 44.186 215 112 5 6 215 3 214 8.95e-55 174
Msa1062060 MtrunA17_Chr1g0196691 42.727 220 123 1 7 223 28 247 1.10e-54 175
Msa1062060 MtrunA17_Chr8g0379561 42.857 224 125 3 1 223 1 222 1.80e-54 174
Msa1062060 MtrunA17_Chr1g0212301 42.202 218 123 2 7 221 3 220 1.65e-53 171
Msa1062060 MtrunA17_Chr1g0196661 42.105 209 117 2 7 212 3 210 1.43e-51 166
Msa1062060 MtrunA17_Chr1g0196721 41.553 219 124 2 8 223 3 220 1.15e-50 164
Msa1062060 MtrunA17_Chr8g0363751 42.009 219 119 3 5 215 3 221 3.13e-50 163
Msa1062060 MtrunA17_Chr5g0415411 40.807 223 122 3 1 215 1 221 1.16e-47 156
Msa1062060 MtrunA17_Chr3g0107731 42.029 207 115 4 16 220 18 221 9.61e-47 154
Msa1062060 MtrunA17_Chr1g0196711 39.524 210 123 2 7 213 3 211 4.08e-46 152
Msa1062060 MtrunA17_Chr3g0107741 40.845 213 117 5 4 212 6 213 1.01e-44 149
Msa1062060 MtrunA17_Chr2g0312771 39.698 199 115 4 16 212 13 208 2.59e-44 147
Msa1062060 MtrunA17_Chr2g0312731 40.291 206 118 5 6 209 3 205 4.21e-44 147
Msa1062060 MtrunA17_Chr2g0312751 38.278 209 124 4 6 212 3 208 7.80e-44 146
Msa1062060 MtrunA17_Chr4g0069471 45.989 187 93 5 3 186 21 202 5.50e-43 144
Msa1062060 MtrunA17_Chr2g0312791 40.196 204 118 3 6 207 3 204 3.89e-42 142
Msa1062060 MtrunA17_Chr2g0312781 37.441 211 127 4 1 209 15 222 1.42e-41 141
Msa1062060 MtrunA17_Chr8g0357211 38.942 208 119 5 16 218 13 217 3.48e-40 137
Msa1062060 MtrunA17_Chr2g0312811 40.566 212 117 7 6 212 3 210 3.79e-40 137
Msa1062060 MtrunA17_Chr8g0357241 38.942 208 119 5 16 218 13 217 4.45e-40 137
Msa1062060 MtrunA17_Chr2g0312721 36.842 209 127 4 6 212 3 208 5.96e-40 136
Msa1062060 MtrunA17_Chr5g0433801 38.498 213 124 5 3 212 2 210 1.39e-37 130
Msa1062060 MtrunA17_Chr8g0391631 46.795 156 73 4 7 153 21 175 1.03e-36 127
Msa1062060 MtrunA17_Chr2g0312691 37.500 208 125 4 7 212 4 208 1.35e-35 125
Msa1062060 MtrunA17_Chr2g0312681 36.058 208 128 4 7 212 4 208 2.71e-35 124
Msa1062060 MtrunA17_Chr2g0312711 38.000 200 118 4 7 204 4 199 1.18e-29 110
Msa1062060 MtrunA17_Chr2g0313561 44.615 65 35 1 51 114 2 66 3.29e-15 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1062060 AT3G09270.1 54.587 218 95 4 3 217 2 218 2.86e-77 232
Msa1062060 AT2G29420.1 46.789 218 112 3 3 218 5 220 1.42e-69 213
Msa1062060 AT2G29450.1 48.792 207 104 2 3 207 2 208 1.92e-59 187
Msa1062060 AT2G29490.1 47.847 209 106 3 1 207 1 208 5.21e-59 186
Msa1062060 AT2G29480.1 46.890 209 108 3 1 207 1 208 2.66e-56 179
Msa1062060 AT2G29440.1 47.368 209 106 4 1 207 1 207 2.85e-56 179
Msa1062060 AT2G29460.1 45.455 209 111 3 1 207 1 208 1.48e-54 174
Msa1062060 AT2G29470.1 44.762 210 112 4 1 207 1 209 2.46e-54 174
Msa1062060 AT1G59700.1 43.578 218 115 4 5 214 4 221 7.11e-48 157
Msa1062060 AT1G10370.1 39.367 221 125 3 1 214 1 219 6.22e-47 155
Msa1062060 AT1G59670.1 39.732 224 126 4 5 220 4 226 2.02e-46 154
Msa1062060 AT1G74590.1 38.182 220 129 3 1 214 1 219 1.06e-45 152
Msa1062060 AT5G62480.1 38.222 225 128 4 8 222 9 232 3.07e-45 151
Msa1062060 AT1G78370.1 40.686 204 115 5 16 217 13 212 3.31e-45 150
Msa1062060 AT1G69930.1 35.841 226 139 2 2 221 7 232 1.06e-44 149
Msa1062060 AT1G78340.1 43.256 215 114 6 6 216 3 213 2.09e-44 148
Msa1062060 AT1G78320.1 41.063 207 117 4 6 210 3 206 1.29e-43 146
Msa1062060 AT1G27130.1 37.333 225 132 4 1 217 1 224 2.66e-43 145
Msa1062060 AT1G78380.1 42.308 208 115 5 7 212 4 208 6.60e-43 144
Msa1062060 AT1G17170.1 41.315 213 119 5 6 216 3 211 6.78e-43 144
Msa1062060 AT1G10360.1 36.111 216 131 2 6 214 4 219 1.28e-42 144
Msa1062060 AT1G17180.1 41.232 211 115 6 6 212 3 208 1.84e-40 138
Msa1062060 AT1G27140.1 36.681 229 133 6 1 219 1 227 3.02e-40 138
Msa1062060 AT1G53680.1 38.679 212 125 4 1 209 1 210 5.38e-39 134
Msa1062060 AT1G69920.1 35.088 228 138 4 1 218 26 253 2.32e-38 134
Msa1062060 AT1G17190.1 42.697 178 97 4 16 191 14 188 7.51e-38 131
Msa1062060 AT1G78360.1 39.713 209 120 5 7 212 4 209 8.70e-37 129
Msa1062060 AT3G43800.1 39.713 209 113 9 4 204 2 205 5.82e-36 127
Msa1062060 AT5G62480.2 30.837 227 116 6 8 222 9 206 1.57e-26 102
Msa1062060 AT5G62480.3 30.837 227 115 6 8 222 9 205 1.94e-26 102
Msa1062060 AT1G78320.2 33.010 206 108 4 6 210 3 179 1.71e-25 99.0
Msa1062060 AT2G02380.1 27.442 215 137 6 5 207 9 216 5.83e-13 66.2

Find 47 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAGCCTTGGCTCGTTTC+TGG 0.095537 7_2:+52557764 Msa1062060:CDS
ATATGTACTTGTGATATTTA+AGG 0.143049 7_2:+52559574 Msa1062060:three_prime_UTR
AATTTCCAAAGCTTTATAAT+TGG 0.263061 7_2:+52559424 Msa1062060:CDS
ACAGGAACTTTCTTATAAAC+AGG 0.283283 7_2:-52557640 None:intergenic
TTGGGTGGTTGTTGAATTCT+TGG 0.290435 7_2:-52559449 None:intergenic
GAGCTCAAAGACAAATTCTT+TGG 0.309252 7_2:+52559300 Msa1062060:CDS
CTCTACGATGGCATCAAATA+AGG 0.319615 7_2:+52557480 Msa1062060:exon
AAATATGAGAACGAAGAGTT+TGG 0.334423 7_2:+52557586 Msa1062060:CDS
TGGCTCCAATTATAAAGCTT+TGG 0.343224 7_2:-52559429 None:intergenic
AAAGGATCAGAAGGTAAGAT+AGG 0.365388 7_2:-52557739 None:intergenic
AGTTCAAATGCTTCTTGTAC+AGG 0.398599 7_2:-52559381 None:intergenic
CAACAACCACCCAATTGTTA+AGG 0.408785 7_2:+52559458 Msa1062060:CDS
GCCTCCAAGAGAGACCCTTT+TGG 0.422980 7_2:+52559488 Msa1062060:CDS
TTCTTTGGTGGGGAGGAGAT+TGG 0.431190 7_2:+52559315 Msa1062060:CDS
TACCTTGTCATCTATGAACT+TGG 0.433025 7_2:-52557788 None:intergenic
AATATGAGAACGAAGAGTTT+GGG 0.460478 7_2:+52557587 Msa1062060:CDS
GGAAATAGCTCTAAAGTTGA+AGG 0.475384 7_2:+52557552 Msa1062060:CDS
TGATCCTTTCAAAAGAGCCT+TGG 0.476637 7_2:+52557753 Msa1062060:CDS
AACACGATGCATAAAGTGAA+TGG 0.484618 7_2:+52559678 Msa1062060:three_prime_UTR
GTTCAAAATAGATCAATTGA+AGG 0.490056 7_2:+52559544 Msa1062060:exon
GCCAAAAGGGTCTCTCTTGG+AGG 0.494031 7_2:-52559489 None:intergenic
ATCACAAGTGACTCTGCTAT+AGG 0.496284 7_2:-52557682 None:intergenic
CTCAAAGACAAATTCTTTGG+TGG 0.503966 7_2:+52559303 Msa1062060:CDS
AATGCCAAAAGGGTCTCTCT+TGG 0.504098 7_2:-52559492 None:intergenic
TTGAGTATATTGATGAGACT+TGG 0.504629 7_2:+52557707 Msa1062060:CDS
GAGCTTTGTAGAATGCCAAA+AGG 0.508352 7_2:-52559503 None:intergenic
TGGGAAGTCCATGGTCAACC+AGG 0.514711 7_2:+52557527 Msa1062060:CDS
TCAAAGACAAATTCTTTGGT+GGG 0.523453 7_2:+52559304 Msa1062060:CDS
AGAACGTGAGAAGAGTATTG+AGG 0.526929 7_2:+52559245 Msa1062060:CDS
TTGGAATTGTGGGAAGTCCA+TGG 0.541617 7_2:+52557518 Msa1062060:CDS
ATCAAATAAGGAAGAGGTGA+AGG 0.549693 7_2:+52557492 Msa1062060:CDS
CAGGAACTTTCTTATAAACA+GGG 0.557657 7_2:-52557639 None:intergenic
GAGTATTGAGGAAACAAAAG+AGG 0.559224 7_2:+52559257 Msa1062060:CDS
AGCTTTGTAGAATGCCAAAA+GGG 0.565015 7_2:-52559502 None:intergenic
CAAAGACAAATTCTTTGGTG+GGG 0.574827 7_2:+52559305 Msa1062060:CDS
AGACAAATTCTTTGGTGGGG+AGG 0.574875 7_2:+52559308 Msa1062060:CDS
GATGGCATCAAATAAGGAAG+AGG 0.575114 7_2:+52557486 Msa1062060:exon
ATTTCCACCCTGGTTGACCA+TGG 0.579102 7_2:-52557535 None:intergenic
ACCAGTATATGAATGATGTA+CGG 0.587131 7_2:+52559196 Msa1062060:intron
ACTGAAATTGTTCACTAGTG+AGG 0.589749 7_2:+52559401 Msa1062060:CDS
CTTTAGAGCTATTTCCACCC+TGG 0.599029 7_2:-52557545 None:intergenic
GAAATAGCTCTAAAGTTGAA+GGG 0.613468 7_2:+52557553 Msa1062060:CDS
GACCAAGTTCATAGATGACA+AGG 0.631987 7_2:+52557786 Msa1062060:CDS
GGGAAGTCCATGGTCAACCA+GGG 0.664739 7_2:+52557528 Msa1062060:CDS
TAATTGAACAAGCTCTACGA+TGG 0.673591 7_2:+52557468 Msa1062060:exon
AAGTCCATGGTCAACCAGGG+TGG 0.678748 7_2:+52557531 Msa1062060:CDS
CTTGGTCCAGAAACGAGCCA+AGG 0.682377 7_2:-52557770 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTAAATATGTTTTTTTTA+GGG + chr7_2:52557877-52557896 Msa1062060:intron 10.0%
!!! ATTAAATATGTTTTTTTTAG+GGG + chr7_2:52557878-52557897 Msa1062060:intron 10.0%
!!! ATTAAATTATGTTATTTGTT+AGG - chr7_2:52557936-52557955 None:intergenic 10.0%
!! AATCAAAAGAAAAATAATTT+GGG - chr7_2:52558181-52558200 None:intergenic 10.0%
!! AAATCAAAAGAAAAATAATT+TGG - chr7_2:52558182-52558201 None:intergenic 10.0%
!!! ATTTTAATGAAAAAATATGA+GGG - chr7_2:52558233-52558252 None:intergenic 10.0%
!!! AATTTTAATGAAAAAATATG+AGG - chr7_2:52558234-52558253 None:intergenic 10.0%
!! GAAAATAAAAATAAAAATGT+TGG + chr7_2:52558542-52558561 Msa1062060:intron 10.0%
!! AAAAAACCTATAAAAAATAA+CGG - chr7_2:52558619-52558638 None:intergenic 10.0%
!!! TTAATTAATTTGTTTTGTAT+AGG - chr7_2:52559008-52559027 None:intergenic 10.0%
!!! CATTAAATATGTTTTTTTTA+GGG + chr7_2:52557877-52557896 Msa1062060:intron 10.0%
!!! ATTAAATATGTTTTTTTTAG+GGG + chr7_2:52557878-52557897 Msa1062060:intron 10.0%
!!! ATTAAATTATGTTATTTGTT+AGG - chr7_2:52557936-52557955 None:intergenic 10.0%
!! AATCAAAAGAAAAATAATTT+GGG - chr7_2:52558181-52558200 None:intergenic 10.0%
!! AAATCAAAAGAAAAATAATT+TGG - chr7_2:52558182-52558201 None:intergenic 10.0%
!!! ATTTTAATGAAAAAATATGA+GGG - chr7_2:52558233-52558252 None:intergenic 10.0%
!!! AATTTTAATGAAAAAATATG+AGG - chr7_2:52558234-52558253 None:intergenic 10.0%
!! GAAAATAAAAATAAAAATGT+TGG + chr7_2:52558542-52558561 Msa1062060:intron 10.0%
!! AAAAAACCTATAAAAAATAA+CGG - chr7_2:52558619-52558638 None:intergenic 10.0%
!!! TTAATTAATTTGTTTTGTAT+AGG - chr7_2:52559008-52559027 None:intergenic 10.0%
!!! GCATTAAATATGTTTTTTTT+AGG + chr7_2:52557876-52557895 Msa1062060:intron 15.0%
!! AAAAACCTATAAAAAATAAC+GGG - chr7_2:52558618-52558637 None:intergenic 15.0%
!!! TTGAGTTTAAATTTAGTTTT+GGG + chr7_2:52558787-52558806 Msa1062060:intron 15.0%
!!! TTTATTTTTTACAGTTAACA+TGG + chr7_2:52559053-52559072 Msa1062060:intron 15.0%
!! GTAGTATAAGTTAATTAATT+TGG - chr7_2:52559018-52559037 None:intergenic 15.0%
!!! TTTATTTTTTACAGTTAACA+TGG + chr7_2:52559053-52559072 Msa1062060:intron 15.0%
!!! GCATTAAATATGTTTTTTTT+AGG + chr7_2:52557876-52557895 Msa1062060:intron 15.0%
!! AAAAACCTATAAAAAATAAC+GGG - chr7_2:52558618-52558637 None:intergenic 15.0%
!!! TTGAGTTTAAATTTAGTTTT+GGG + chr7_2:52558787-52558806 Msa1062060:intron 15.0%
!!! TTTATTTTTTACAGTTAACA+TGG + chr7_2:52559053-52559072 Msa1062060:intron 15.0%
!! GTAGTATAAGTTAATTAATT+TGG - chr7_2:52559018-52559037 None:intergenic 15.0%
!!! TTTATTTTTTACAGTTAACA+TGG + chr7_2:52559053-52559072 Msa1062060:intron 15.0%
!!! TTTTATTTTCATAGGAAAGA+AGG - chr7_2:52558532-52558551 None:intergenic 20.0%
!! ACATAAAAAACTCAAAAAAG+TGG - chr7_2:52558681-52558700 None:intergenic 20.0%
!! TCTAAGTTTGTATATGAATT+GGG - chr7_2:52558730-52558749 None:intergenic 20.0%
!! ATCTAAGTTTGTATATGAAT+TGG - chr7_2:52558731-52558750 None:intergenic 20.0%
!!! GTTGAGTTTAAATTTAGTTT+TGG + chr7_2:52558786-52558805 Msa1062060:intron 20.0%
!! ATAAAAAGAAGTTTAGAAGA+AGG - chr7_2:52558923-52558942 None:intergenic 20.0%
!!! AATTTCCAAAGCTTTATAAT+TGG + chr7_2:52559424-52559443 Msa1062060:CDS 20.0%
!! ATATGTACTTGTGATATTTA+AGG + chr7_2:52559574-52559593 Msa1062060:three_prime_UTR 20.0%
!!! TTTTATTTTCATAGGAAAGA+AGG - chr7_2:52558532-52558551 None:intergenic 20.0%
!! ACATAAAAAACTCAAAAAAG+TGG - chr7_2:52558681-52558700 None:intergenic 20.0%
!! TCTAAGTTTGTATATGAATT+GGG - chr7_2:52558730-52558749 None:intergenic 20.0%
!! ATCTAAGTTTGTATATGAAT+TGG - chr7_2:52558731-52558750 None:intergenic 20.0%
!!! GTTGAGTTTAAATTTAGTTT+TGG + chr7_2:52558786-52558805 Msa1062060:intron 20.0%
!! ATAAAAAGAAGTTTAGAAGA+AGG - chr7_2:52558923-52558942 None:intergenic 20.0%
!!! AATTTCCAAAGCTTTATAAT+TGG + chr7_2:52559424-52559443 Msa1062060:CDS 20.0%
!! ATATGTACTTGTGATATTTA+AGG + chr7_2:52559574-52559593 Msa1062060:three_prime_UTR 20.0%
! ACACACAAAAAAATTGAAGA+GGG - chr7_2:52557822-52557841 None:intergenic 25.0%
! TACACACAAAAAAATTGAAG+AGG - chr7_2:52557823-52557842 None:intergenic 25.0%
!! GATCATTAAGATGTTTGTTA+GGG + chr7_2:52557900-52557919 Msa1062060:intron 25.0%
!! ATCATTAAGATGTTTGTTAG+GGG + chr7_2:52557901-52557920 Msa1062060:intron 25.0%
! ATATAGTGAAAATAAGCTAC+AGG - chr7_2:52558282-52558301 None:intergenic 25.0%
! TGATTTATGACAAAAACCTT+TGG + chr7_2:52558500-52558519 Msa1062060:intron 25.0%
! AATAAAAATGTTGGCATTAG+TGG + chr7_2:52558551-52558570 Msa1062060:intron 25.0%
! ATAAAAATGTTGGCATTAGT+GGG + chr7_2:52558552-52558571 Msa1062060:intron 25.0%
!!! TATAAAAAATAACGGGTTTC+AGG - chr7_2:52558611-52558630 None:intergenic 25.0%
!!! TGAAACCCGTTATTTTTTAT+AGG + chr7_2:52558610-52558629 Msa1062060:intron 25.0%
! CAAACTTAGATGAGATTATT+CGG + chr7_2:52558740-52558759 Msa1062060:intron 25.0%
! AAACTTAGATGAGATTATTC+GGG + chr7_2:52558741-52558760 Msa1062060:intron 25.0%
! TAATTTGGTCTCACAAATTA+AGG - chr7_2:52559094-52559113 None:intergenic 25.0%
!! GCAATTTTTCCTTAACAATT+GGG - chr7_2:52559470-52559489 None:intergenic 25.0%
! GTTCAAAATAGATCAATTGA+AGG + chr7_2:52559544-52559563 Msa1062060:exon 25.0%
!!! TTATGCATCGTGTTTTTTTT+AGG - chr7_2:52559672-52559691 None:intergenic 25.0%
! ACACACAAAAAAATTGAAGA+GGG - chr7_2:52557822-52557841 None:intergenic 25.0%
! TACACACAAAAAAATTGAAG+AGG - chr7_2:52557823-52557842 None:intergenic 25.0%
!! GATCATTAAGATGTTTGTTA+GGG + chr7_2:52557900-52557919 Msa1062060:intron 25.0%
!! ATCATTAAGATGTTTGTTAG+GGG + chr7_2:52557901-52557920 Msa1062060:intron 25.0%
! ATATAGTGAAAATAAGCTAC+AGG - chr7_2:52558282-52558301 None:intergenic 25.0%
! TGATTTATGACAAAAACCTT+TGG + chr7_2:52558500-52558519 Msa1062060:intron 25.0%
! AATAAAAATGTTGGCATTAG+TGG + chr7_2:52558551-52558570 Msa1062060:intron 25.0%
! ATAAAAATGTTGGCATTAGT+GGG + chr7_2:52558552-52558571 Msa1062060:intron 25.0%
!!! TATAAAAAATAACGGGTTTC+AGG - chr7_2:52558611-52558630 None:intergenic 25.0%
!!! TGAAACCCGTTATTTTTTAT+AGG + chr7_2:52558610-52558629 Msa1062060:intron 25.0%
! CAAACTTAGATGAGATTATT+CGG + chr7_2:52558740-52558759 Msa1062060:intron 25.0%
! AAACTTAGATGAGATTATTC+GGG + chr7_2:52558741-52558760 Msa1062060:intron 25.0%
! TAATTTGGTCTCACAAATTA+AGG - chr7_2:52559094-52559113 None:intergenic 25.0%
!! GCAATTTTTCCTTAACAATT+GGG - chr7_2:52559470-52559489 None:intergenic 25.0%
! GTTCAAAATAGATCAATTGA+AGG + chr7_2:52559544-52559563 Msa1062060:exon 25.0%
!!! TTATGCATCGTGTTTTTTTT+AGG - chr7_2:52559672-52559691 None:intergenic 25.0%
! TGTACTCAAACAACTGTTTT+TGG - chr7_2:52557448-52557467 None:intergenic 30.0%
!! GAAATAGCTCTAAAGTTGAA+GGG + chr7_2:52557553-52557572 Msa1062060:CDS 30.0%
AAATATGAGAACGAAGAGTT+TGG + chr7_2:52557586-52557605 Msa1062060:CDS 30.0%
AATATGAGAACGAAGAGTTT+GGG + chr7_2:52557587-52557606 Msa1062060:CDS 30.0%
CAGGAACTTTCTTATAAACA+GGG - chr7_2:52557642-52557661 None:intergenic 30.0%
ACAGGAACTTTCTTATAAAC+AGG - chr7_2:52557643-52557662 None:intergenic 30.0%
!!! GTTCCTGTTTTTGTTCATAA+TGG + chr7_2:52557655-52557674 Msa1062060:CDS 30.0%
TTGCCATTATGAACAAAAAC+AGG - chr7_2:52557661-52557680 None:intergenic 30.0%
TTGAGTATATTGATGAGACT+TGG + chr7_2:52557707-52557726 Msa1062060:CDS 30.0%
CACACAAAAAAATTGAAGAG+GGG - chr7_2:52557821-52557840 None:intergenic 30.0%
TATTTAATGCCAACTAGAGT+TGG - chr7_2:52557866-52557885 None:intergenic 30.0%
GGATCATTAAGATGTTTGTT+AGG + chr7_2:52557899-52557918 Msa1062060:intron 30.0%
! TGTGATACTATTGACTAGTT+TGG + chr7_2:52558110-52558129 Msa1062060:intron 30.0%
! TTTTTATGTGAGTTTAACCG+TGG + chr7_2:52558692-52558711 Msa1062060:intron 30.0%
GGTCTTTCCTATTATAATCA+AGG + chr7_2:52558762-52558781 Msa1062060:intron 30.0%
CTCAACACCTTGATTATAAT+AGG - chr7_2:52558772-52558791 None:intergenic 30.0%
TTTGTATAGGAAGTCTTCTA+TGG - chr7_2:52558995-52559014 None:intergenic 30.0%
! TATACTGGTCTCACAAATTA+AGG - chr7_2:52559185-52559204 None:intergenic 30.0%
ACCAGTATATGAATGATGTA+CGG + chr7_2:52559196-52559215 Msa1062060:intron 30.0%
TCAAAGACAAATTCTTTGGT+GGG + chr7_2:52559304-52559323 Msa1062060:CDS 30.0%
! ATTTTTCCTTAACAATTGGG+TGG - chr7_2:52559467-52559486 None:intergenic 30.0%
! GGCAATTTTTCCTTAACAAT+TGG - chr7_2:52559471-52559490 None:intergenic 30.0%
! TGTACTCAAACAACTGTTTT+TGG - chr7_2:52557448-52557467 None:intergenic 30.0%
!! GAAATAGCTCTAAAGTTGAA+GGG + chr7_2:52557553-52557572 Msa1062060:CDS 30.0%
AAATATGAGAACGAAGAGTT+TGG + chr7_2:52557586-52557605 Msa1062060:CDS 30.0%
AATATGAGAACGAAGAGTTT+GGG + chr7_2:52557587-52557606 Msa1062060:CDS 30.0%
CAGGAACTTTCTTATAAACA+GGG - chr7_2:52557642-52557661 None:intergenic 30.0%
ACAGGAACTTTCTTATAAAC+AGG - chr7_2:52557643-52557662 None:intergenic 30.0%
!!! GTTCCTGTTTTTGTTCATAA+TGG + chr7_2:52557655-52557674 Msa1062060:CDS 30.0%
TTGCCATTATGAACAAAAAC+AGG - chr7_2:52557661-52557680 None:intergenic 30.0%
TTGAGTATATTGATGAGACT+TGG + chr7_2:52557707-52557726 Msa1062060:CDS 30.0%
CACACAAAAAAATTGAAGAG+GGG - chr7_2:52557821-52557840 None:intergenic 30.0%
TATTTAATGCCAACTAGAGT+TGG - chr7_2:52557866-52557885 None:intergenic 30.0%
GGATCATTAAGATGTTTGTT+AGG + chr7_2:52557899-52557918 Msa1062060:intron 30.0%
! TGTGATACTATTGACTAGTT+TGG + chr7_2:52558110-52558129 Msa1062060:intron 30.0%
! TTTTTATGTGAGTTTAACCG+TGG + chr7_2:52558692-52558711 Msa1062060:intron 30.0%
GGTCTTTCCTATTATAATCA+AGG + chr7_2:52558762-52558781 Msa1062060:intron 30.0%
CTCAACACCTTGATTATAAT+AGG - chr7_2:52558772-52558791 None:intergenic 30.0%
TTTGTATAGGAAGTCTTCTA+TGG - chr7_2:52558995-52559014 None:intergenic 30.0%
! TATACTGGTCTCACAAATTA+AGG - chr7_2:52559185-52559204 None:intergenic 30.0%
ACCAGTATATGAATGATGTA+CGG + chr7_2:52559196-52559215 Msa1062060:intron 30.0%
TCAAAGACAAATTCTTTGGT+GGG + chr7_2:52559304-52559323 Msa1062060:CDS 30.0%
! ATTTTTCCTTAACAATTGGG+TGG - chr7_2:52559467-52559486 None:intergenic 30.0%
! GGCAATTTTTCCTTAACAAT+TGG - chr7_2:52559471-52559490 None:intergenic 30.0%
TAATTGAACAAGCTCTACGA+TGG + chr7_2:52557468-52557487 Msa1062060:exon 35.0%
ATCAAATAAGGAAGAGGTGA+AGG + chr7_2:52557492-52557511 Msa1062060:CDS 35.0%
!!! GTGAAGGTTTTTGGAATTGT+GGG + chr7_2:52557508-52557527 Msa1062060:CDS 35.0%
!! GGAAATAGCTCTAAAGTTGA+AGG + chr7_2:52557552-52557571 Msa1062060:CDS 35.0%
AAAGGATCAGAAGGTAAGAT+AGG - chr7_2:52557742-52557761 None:intergenic 35.0%
TACCTTGTCATCTATGAACT+TGG - chr7_2:52557791-52557810 None:intergenic 35.0%
!! AAGAGCGTTTAGATGAGATT+AGG + chr7_2:52557995-52558014 Msa1062060:intron 35.0%
! AGAGCGTTTAGATGAGATTA+GGG + chr7_2:52557996-52558015 Msa1062060:intron 35.0%
TCCTATACGATTATGGTCTT+GGG - chr7_2:52558058-52558077 None:intergenic 35.0%
CTAGTCAATAGTATCACAGT+TGG - chr7_2:52558108-52558127 None:intergenic 35.0%
! AAACCCACTAATTTTCAGTC+TGG + chr7_2:52558134-52558153 Msa1062060:intron 35.0%
! AACCCACTAATTTTCAGTCT+GGG + chr7_2:52558135-52558154 Msa1062060:intron 35.0%
AACCCAGACTGAAAATTAGT+GGG - chr7_2:52558140-52558159 None:intergenic 35.0%
TCCGTACATCATTCATATAC+TGG - chr7_2:52559200-52559219 None:intergenic 35.0%
!! GAGTATTGAGGAAACAAAAG+AGG + chr7_2:52559257-52559276 Msa1062060:CDS 35.0%
GAGCTCAAAGACAAATTCTT+TGG + chr7_2:52559300-52559319 Msa1062060:CDS 35.0%
CTCAAAGACAAATTCTTTGG+TGG + chr7_2:52559303-52559322 Msa1062060:CDS 35.0%
CAAAGACAAATTCTTTGGTG+GGG + chr7_2:52559305-52559324 Msa1062060:CDS 35.0%
GATCCAAAAAGATATGACCA+CGG - chr7_2:52559358-52559377 None:intergenic 35.0%
AGTTCAAATGCTTCTTGTAC+AGG - chr7_2:52559384-52559403 None:intergenic 35.0%
ACTGAAATTGTTCACTAGTG+AGG + chr7_2:52559401-52559420 Msa1062060:CDS 35.0%
TGGCTCCAATTATAAAGCTT+TGG - chr7_2:52559432-52559451 None:intergenic 35.0%
! AGCTTTGTAGAATGCCAAAA+GGG - chr7_2:52559505-52559524 None:intergenic 35.0%
AACACGATGCATAAAGTGAA+TGG + chr7_2:52559678-52559697 Msa1062060:three_prime_UTR 35.0%
TAATTGAACAAGCTCTACGA+TGG + chr7_2:52557468-52557487 Msa1062060:exon 35.0%
ATCAAATAAGGAAGAGGTGA+AGG + chr7_2:52557492-52557511 Msa1062060:CDS 35.0%
!!! GTGAAGGTTTTTGGAATTGT+GGG + chr7_2:52557508-52557527 Msa1062060:CDS 35.0%
!! GGAAATAGCTCTAAAGTTGA+AGG + chr7_2:52557552-52557571 Msa1062060:CDS 35.0%
AAAGGATCAGAAGGTAAGAT+AGG - chr7_2:52557742-52557761 None:intergenic 35.0%
TACCTTGTCATCTATGAACT+TGG - chr7_2:52557791-52557810 None:intergenic 35.0%
!! AAGAGCGTTTAGATGAGATT+AGG + chr7_2:52557995-52558014 Msa1062060:intron 35.0%
! AGAGCGTTTAGATGAGATTA+GGG + chr7_2:52557996-52558015 Msa1062060:intron 35.0%
TCCTATACGATTATGGTCTT+GGG - chr7_2:52558058-52558077 None:intergenic 35.0%
CTAGTCAATAGTATCACAGT+TGG - chr7_2:52558108-52558127 None:intergenic 35.0%
! AAACCCACTAATTTTCAGTC+TGG + chr7_2:52558134-52558153 Msa1062060:intron 35.0%
! AACCCACTAATTTTCAGTCT+GGG + chr7_2:52558135-52558154 Msa1062060:intron 35.0%
AACCCAGACTGAAAATTAGT+GGG - chr7_2:52558140-52558159 None:intergenic 35.0%
TCCGTACATCATTCATATAC+TGG - chr7_2:52559200-52559219 None:intergenic 35.0%
!! GAGTATTGAGGAAACAAAAG+AGG + chr7_2:52559257-52559276 Msa1062060:CDS 35.0%
GAGCTCAAAGACAAATTCTT+TGG + chr7_2:52559300-52559319 Msa1062060:CDS 35.0%
CTCAAAGACAAATTCTTTGG+TGG + chr7_2:52559303-52559322 Msa1062060:CDS 35.0%
CAAAGACAAATTCTTTGGTG+GGG + chr7_2:52559305-52559324 Msa1062060:CDS 35.0%
GATCCAAAAAGATATGACCA+CGG - chr7_2:52559358-52559377 None:intergenic 35.0%
AGTTCAAATGCTTCTTGTAC+AGG - chr7_2:52559384-52559403 None:intergenic 35.0%
ACTGAAATTGTTCACTAGTG+AGG + chr7_2:52559401-52559420 Msa1062060:CDS 35.0%
TGGCTCCAATTATAAAGCTT+TGG - chr7_2:52559432-52559451 None:intergenic 35.0%
! AGCTTTGTAGAATGCCAAAA+GGG - chr7_2:52559505-52559524 None:intergenic 35.0%
AACACGATGCATAAAGTGAA+TGG + chr7_2:52559678-52559697 Msa1062060:three_prime_UTR 35.0%
CTCTACGATGGCATCAAATA+AGG + chr7_2:52557480-52557499 Msa1062060:exon 40.0%
GATGGCATCAAATAAGGAAG+AGG + chr7_2:52557486-52557505 Msa1062060:exon 40.0%
! AAGGAAGAGGTGAAGGTTTT+TGG + chr7_2:52557499-52557518 Msa1062060:CDS 40.0%
!!! GGTGAAGGTTTTTGGAATTG+TGG + chr7_2:52557507-52557526 Msa1062060:CDS 40.0%
ATCACAAGTGACTCTGCTAT+AGG - chr7_2:52557685-52557704 None:intergenic 40.0%
!! GCTCTTTTGAAAGGATCAGA+AGG - chr7_2:52557751-52557770 None:intergenic 40.0%
TGATCCTTTCAAAAGAGCCT+TGG + chr7_2:52557753-52557772 Msa1062060:CDS 40.0%
GACCAAGTTCATAGATGACA+AGG + chr7_2:52557786-52557805 Msa1062060:CDS 40.0%
ACTAGAGTTGGATACGAACT+TGG - chr7_2:52557854-52557873 None:intergenic 40.0%
AGTTCGTATCCAACTCTAGT+TGG + chr7_2:52557854-52557873 Msa1062060:intron 40.0%
GAGCGTTTAGATGAGATTAG+GGG + chr7_2:52557997-52558016 Msa1062060:intron 40.0%
TGATCAAACCCAACCTAAAC+CGG - chr7_2:52558033-52558052 None:intergenic 40.0%
ACCCAAGACCATAATCGTAT+AGG + chr7_2:52558054-52558073 Msa1062060:intron 40.0%
GTCCTATACGATTATGGTCT+TGG - chr7_2:52558059-52558078 None:intergenic 40.0%
CACAGTGTCCTATACGATTA+TGG - chr7_2:52558065-52558084 None:intergenic 40.0%
CATAATCGTATAGGACACTG+TGG + chr7_2:52558063-52558082 Msa1062060:intron 40.0%
CAACCCAGACTGAAAATTAG+TGG - chr7_2:52558141-52558160 None:intergenic 40.0%
GGAAAGAAGGAGAATACCAA+AGG - chr7_2:52558519-52558538 None:intergenic 40.0%
! TAGTGGGTAAGTGGGTTTAT+TGG + chr7_2:52558568-52558587 Msa1062060:intron 40.0%
! AGTGGGTAAGTGGGTTTATT+GGG + chr7_2:52558569-52558588 Msa1062060:intron 40.0%
GTTGGGTAATTGTGTGAGTA+TGG - chr7_2:52558653-52558672 None:intergenic 40.0%
ACTCACACAATTACCCAACT+CGG + chr7_2:52558654-52558673 Msa1062060:intron 40.0%
TCAAAAAAGTGGACCGAGTT+GGG - chr7_2:52558670-52558689 None:intergenic 40.0%
TTGGGTCAACTTGAAAACCA+CGG - chr7_2:52558712-52558731 None:intergenic 40.0%
!! AGAACGTGAGAAGAGTATTG+AGG + chr7_2:52559245-52559264 Msa1062060:CDS 40.0%
! TTTTGTTGATATTGCTGCCG+TGG + chr7_2:52559338-52559357 Msa1062060:CDS 40.0%
TTGGGTGGTTGTTGAATTCT+TGG - chr7_2:52559452-52559471 None:intergenic 40.0%
CAACAACCACCCAATTGTTA+AGG + chr7_2:52559458-52559477 Msa1062060:CDS 40.0%
! GAGCTTTGTAGAATGCCAAA+AGG - chr7_2:52559506-52559525 None:intergenic 40.0%
CTCTACGATGGCATCAAATA+AGG + chr7_2:52557480-52557499 Msa1062060:exon 40.0%
GATGGCATCAAATAAGGAAG+AGG + chr7_2:52557486-52557505 Msa1062060:exon 40.0%
! AAGGAAGAGGTGAAGGTTTT+TGG + chr7_2:52557499-52557518 Msa1062060:CDS 40.0%
!!! GGTGAAGGTTTTTGGAATTG+TGG + chr7_2:52557507-52557526 Msa1062060:CDS 40.0%
ATCACAAGTGACTCTGCTAT+AGG - chr7_2:52557685-52557704 None:intergenic 40.0%
!! GCTCTTTTGAAAGGATCAGA+AGG - chr7_2:52557751-52557770 None:intergenic 40.0%
TGATCCTTTCAAAAGAGCCT+TGG + chr7_2:52557753-52557772 Msa1062060:CDS 40.0%
GACCAAGTTCATAGATGACA+AGG + chr7_2:52557786-52557805 Msa1062060:CDS 40.0%
ACTAGAGTTGGATACGAACT+TGG - chr7_2:52557854-52557873 None:intergenic 40.0%
AGTTCGTATCCAACTCTAGT+TGG + chr7_2:52557854-52557873 Msa1062060:intron 40.0%
GAGCGTTTAGATGAGATTAG+GGG + chr7_2:52557997-52558016 Msa1062060:intron 40.0%
TGATCAAACCCAACCTAAAC+CGG - chr7_2:52558033-52558052 None:intergenic 40.0%
ACCCAAGACCATAATCGTAT+AGG + chr7_2:52558054-52558073 Msa1062060:intron 40.0%
GTCCTATACGATTATGGTCT+TGG - chr7_2:52558059-52558078 None:intergenic 40.0%
CACAGTGTCCTATACGATTA+TGG - chr7_2:52558065-52558084 None:intergenic 40.0%
CATAATCGTATAGGACACTG+TGG + chr7_2:52558063-52558082 Msa1062060:intron 40.0%
CAACCCAGACTGAAAATTAG+TGG - chr7_2:52558141-52558160 None:intergenic 40.0%
GGAAAGAAGGAGAATACCAA+AGG - chr7_2:52558519-52558538 None:intergenic 40.0%
! TAGTGGGTAAGTGGGTTTAT+TGG + chr7_2:52558568-52558587 Msa1062060:intron 40.0%
! AGTGGGTAAGTGGGTTTATT+GGG + chr7_2:52558569-52558588 Msa1062060:intron 40.0%
GTTGGGTAATTGTGTGAGTA+TGG - chr7_2:52558653-52558672 None:intergenic 40.0%
ACTCACACAATTACCCAACT+CGG + chr7_2:52558654-52558673 Msa1062060:intron 40.0%
TCAAAAAAGTGGACCGAGTT+GGG - chr7_2:52558670-52558689 None:intergenic 40.0%
TTGGGTCAACTTGAAAACCA+CGG - chr7_2:52558712-52558731 None:intergenic 40.0%
!! AGAACGTGAGAAGAGTATTG+AGG + chr7_2:52559245-52559264 Msa1062060:CDS 40.0%
! TTTTGTTGATATTGCTGCCG+TGG + chr7_2:52559338-52559357 Msa1062060:CDS 40.0%
TTGGGTGGTTGTTGAATTCT+TGG - chr7_2:52559452-52559471 None:intergenic 40.0%
CAACAACCACCCAATTGTTA+AGG + chr7_2:52559458-52559477 Msa1062060:CDS 40.0%
! GAGCTTTGTAGAATGCCAAA+AGG - chr7_2:52559506-52559525 None:intergenic 40.0%
TTGGAATTGTGGGAAGTCCA+TGG + chr7_2:52557518-52557537 Msa1062060:CDS 45.0%
!! CTTTAGAGCTATTTCCACCC+TGG - chr7_2:52557548-52557567 None:intergenic 45.0%
! GATGAGATTAGGGGTGTATG+TGG + chr7_2:52558006-52558025 Msa1062060:intron 45.0%
! TATGTGGACCGGTTTAGGTT+GGG + chr7_2:52558022-52558041 Msa1062060:intron 45.0%
CGTATAGGACACTGTGGTTT+CGG + chr7_2:52558069-52558088 Msa1062060:intron 45.0%
! ATTTTCAGTCTGGGTTGCGT+TGG + chr7_2:52558144-52558163 Msa1062060:intron 45.0%
! TGTTGGCATTAGTGGGTAAG+TGG + chr7_2:52558559-52558578 Msa1062060:intron 45.0%
! GTTGGCATTAGTGGGTAAGT+GGG + chr7_2:52558560-52558579 Msa1062060:intron 45.0%
CTCAAAAAAGTGGACCGAGT+TGG - chr7_2:52558671-52558690 None:intergenic 45.0%
AGACAAATTCTTTGGTGGGG+AGG + chr7_2:52559308-52559327 Msa1062060:CDS 45.0%
! CTGCCGTGGTCATATCTTTT+TGG + chr7_2:52559352-52559371 Msa1062060:CDS 45.0%
AATGCCAAAAGGGTCTCTCT+TGG - chr7_2:52559495-52559514 None:intergenic 45.0%
TTGGAATTGTGGGAAGTCCA+TGG + chr7_2:52557518-52557537 Msa1062060:CDS 45.0%
!! CTTTAGAGCTATTTCCACCC+TGG - chr7_2:52557548-52557567 None:intergenic 45.0%
! GATGAGATTAGGGGTGTATG+TGG + chr7_2:52558006-52558025 Msa1062060:intron 45.0%
! TATGTGGACCGGTTTAGGTT+GGG + chr7_2:52558022-52558041 Msa1062060:intron 45.0%
CGTATAGGACACTGTGGTTT+CGG + chr7_2:52558069-52558088 Msa1062060:intron 45.0%
! ATTTTCAGTCTGGGTTGCGT+TGG + chr7_2:52558144-52558163 Msa1062060:intron 45.0%
! TGTTGGCATTAGTGGGTAAG+TGG + chr7_2:52558559-52558578 Msa1062060:intron 45.0%
! GTTGGCATTAGTGGGTAAGT+GGG + chr7_2:52558560-52558579 Msa1062060:intron 45.0%
CTCAAAAAAGTGGACCGAGT+TGG - chr7_2:52558671-52558690 None:intergenic 45.0%
AGACAAATTCTTTGGTGGGG+AGG + chr7_2:52559308-52559327 Msa1062060:CDS 45.0%
! CTGCCGTGGTCATATCTTTT+TGG + chr7_2:52559352-52559371 Msa1062060:CDS 45.0%
AATGCCAAAAGGGTCTCTCT+TGG - chr7_2:52559495-52559514 None:intergenic 45.0%
!!! ATTTTTATTTTTATTTTCAT+AGG - chr7_2:52558540-52558559 None:intergenic 5.0%
!!! ATTTTTATTTTTATTTTCAT+AGG - chr7_2:52558540-52558559 None:intergenic 5.0%
ATTTCCACCCTGGTTGACCA+TGG - chr7_2:52557538-52557557 None:intergenic 50.0%
! CGAGCCAAGGCTCTTTTGAA+AGG - chr7_2:52557760-52557779 None:intergenic 50.0%
! AAAGAGCCTTGGCTCGTTTC+TGG + chr7_2:52557764-52557783 Msa1062060:CDS 50.0%
! GATTAGGGGTGTATGTGGAC+CGG + chr7_2:52558011-52558030 Msa1062060:intron 50.0%
! GTATGTGGACCGGTTTAGGT+TGG + chr7_2:52558021-52558040 Msa1062060:intron 50.0%
TTCTTTGGTGGGGAGGAGAT+TGG + chr7_2:52559315-52559334 Msa1062060:CDS 50.0%
ATTTCCACCCTGGTTGACCA+TGG - chr7_2:52557538-52557557 None:intergenic 50.0%
! CGAGCCAAGGCTCTTTTGAA+AGG - chr7_2:52557760-52557779 None:intergenic 50.0%
! AAAGAGCCTTGGCTCGTTTC+TGG + chr7_2:52557764-52557783 Msa1062060:CDS 50.0%
! GATTAGGGGTGTATGTGGAC+CGG + chr7_2:52558011-52558030 Msa1062060:intron 50.0%
! GTATGTGGACCGGTTTAGGT+TGG + chr7_2:52558021-52558040 Msa1062060:intron 50.0%
TTCTTTGGTGGGGAGGAGAT+TGG + chr7_2:52559315-52559334 Msa1062060:CDS 50.0%
TGGGAAGTCCATGGTCAACC+AGG + chr7_2:52557527-52557546 Msa1062060:CDS 55.0%
GGGAAGTCCATGGTCAACCA+GGG + chr7_2:52557528-52557547 Msa1062060:CDS 55.0%
AAGTCCATGGTCAACCAGGG+TGG + chr7_2:52557531-52557550 Msa1062060:CDS 55.0%
CTTGGTCCAGAAACGAGCCA+AGG - chr7_2:52557773-52557792 None:intergenic 55.0%
! GGGTGTATGTGGACCGGTTT+AGG + chr7_2:52558017-52558036 Msa1062060:intron 55.0%
AGGACACTGTGGTTTCGGTG+AGG + chr7_2:52558074-52558093 Msa1062060:intron 55.0%
! GCCTCCAAGAGAGACCCTTT+TGG + chr7_2:52559488-52559507 Msa1062060:CDS 55.0%
GCCAAAAGGGTCTCTCTTGG+AGG - chr7_2:52559492-52559511 None:intergenic 55.0%
TGGGAAGTCCATGGTCAACC+AGG + chr7_2:52557527-52557546 Msa1062060:CDS 55.0%
GGGAAGTCCATGGTCAACCA+GGG + chr7_2:52557528-52557547 Msa1062060:CDS 55.0%
AAGTCCATGGTCAACCAGGG+TGG + chr7_2:52557531-52557550 Msa1062060:CDS 55.0%
CTTGGTCCAGAAACGAGCCA+AGG - chr7_2:52557773-52557792 None:intergenic 55.0%
! GGGTGTATGTGGACCGGTTT+AGG + chr7_2:52558017-52558036 Msa1062060:intron 55.0%
AGGACACTGTGGTTTCGGTG+AGG + chr7_2:52558074-52558093 Msa1062060:intron 55.0%
! GCCTCCAAGAGAGACCCTTT+TGG + chr7_2:52559488-52559507 Msa1062060:CDS 55.0%
GCCAAAAGGGTCTCTCTTGG+AGG - chr7_2:52559492-52559511 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 52557438 52559712 52557438 ID=Msa1062060;Name=Msa1062060
chr7_2 mRNA 52557438 52559712 52557438 ID=Msa1062060-mRNA-1;Parent=Msa1062060;Name=Msa1062060-mRNA-1;_AED=0.39;_eAED=0.39;_QI=49|1|1|1|1|1|2|158|224
chr7_2 exon 52557438 52557807 52557438 ID=Msa1062060-mRNA-1:exon:9492;Parent=Msa1062060-mRNA-1
chr7_2 exon 52559201 52559712 52559201 ID=Msa1062060-mRNA-1:exon:9493;Parent=Msa1062060-mRNA-1
chr7_2 five_prime_UTR 52557438 52557486 52557438 ID=Msa1062060-mRNA-1:five_prime_utr;Parent=Msa1062060-mRNA-1
chr7_2 CDS 52557487 52557807 52557487 ID=Msa1062060-mRNA-1:cds;Parent=Msa1062060-mRNA-1
chr7_2 CDS 52559201 52559554 52559201 ID=Msa1062060-mRNA-1:cds;Parent=Msa1062060-mRNA-1
chr7_2 three_prime_UTR 52559555 52559712 52559555 ID=Msa1062060-mRNA-1:three_prime_utr;Parent=Msa1062060-mRNA-1
Gene Sequence

>Msa1062060

ATGGCATCAAATAAGGAAGAGGTGAAGGTTTTTGGAATTGTGGGAAGTCCATGGTCAACCAGGGTGGAAATAGCTCTAAAGTTGAAGGGAGTTGAATACAAATATGAGAACGAAGAGTTTGGGAACTTGAGTGATGCACTCAAAGAATACAACCCTGTTTATAAGAAAGTTCCTGTTTTTGTTCATAATGGCAAGCCTATAGCAGAGTCACTTGTGATTCTTGAGTATATTGATGAGACTTGGAAACAAAATCCTATCTTACCTTCTGATCCTTTCAAAAGAGCCTTGGCTCGTTTCTGGACCAAGTTCATAGATGACAAGTATATGAATGATGTACGGAAAGCTTGTTTCACTTTTGATGAGAAAGAACGTGAGAAGAGTATTGAGGAAACAAAAGAGGCTCTTAAATTTCTTGAGAATGAGCTCAAAGACAAATTCTTTGGTGGGGAGGAGATTGGTTTTGTTGATATTGCTGCCGTGGTCATATCTTTTTGGATCTCTCCTGTACAAGAAGCATTTGAACTGAAATTGTTCACTAGTGAGGAATTTCCAAAGCTTTATAATTGGAGCCAAGAATTCAACAACCACCCAATTGTTAAGGAAAAATTGCCTCCAAGAGAGACCCTTTTGGCATTCTACAAAGCTCGTTATGAAGATCATTTGAGTTCAAAATAG

Protein sequence

>Msa1062060

MASNKEEVKVFGIVGSPWSTRVEIALKLKGVEYKYENEEFGNLSDALKEYNPVYKKVPVFVHNGKPIAESLVILEYIDETWKQNPILPSDPFKRALARFWTKFIDDKYMNDVRKACFTFDEKEREKSIEETKEALKFLENELKDKFFGGEEIGFVDIAAVVISFWISPVQEAFELKLFTSEEFPKLYNWSQEFNNHPIVKEKLPPRETLLAFYKARYEDHLSSK*