Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0325430 | AES79080.2 | 53.165 | 316 | 78 | 7 | 37 | 283 | 65 | 379 | 1.30e-83 | 268 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0325430 | sp|Q9C7R6|PUB17_ARATH | 66.372 | 113 | 33 | 2 | 230 | 342 | 619 | 726 | 1.36e-36 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0325430 | Msa0791870 | 0.939300 | 1.601107e-99 | -8.615850e-47 |
| Msa0325430 | Msa0811200 | 0.844150 | 9.035865e-59 | -8.615850e-47 |
| Msa0325430 | Msa1312590 | 0.936066 | 3.140354e-97 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0325430 | MtrunA17_Chr2g0284461 | 92.857 | 112 | 8 | 0 | 232 | 343 | 609 | 720 | 8.06e-62 | 209 |
| Msa0325430 | MtrunA17_Chr3g0139641 | 90.625 | 96 | 9 | 0 | 234 | 329 | 37 | 132 | 5.75e-53 | 171 |
| Msa0325430 | MtrunA17_Chr2g0314681 | 63.889 | 108 | 27 | 2 | 39 | 137 | 124 | 228 | 8.83e-33 | 124 |
| Msa0325430 | MtrunA17_Chr5g0397801 | 47.647 | 170 | 66 | 5 | 113 | 277 | 8 | 159 | 1.77e-31 | 119 |
| Msa0325430 | MtrunA17_Chr8g0386391 | 88.136 | 59 | 7 | 0 | 113 | 171 | 8 | 66 | 1.71e-29 | 107 |
| Msa0325430 | MtrunA17_Chr7g0235141 | 92.157 | 51 | 4 | 0 | 233 | 283 | 5 | 55 | 2.91e-25 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0325430 | AT1G29340.1 | 66.372 | 113 | 33 | 2 | 230 | 342 | 619 | 726 | 1.38e-37 | 143 |
| Msa0325430 | AT4G20330.1 | 44.828 | 174 | 86 | 4 | 113 | 281 | 8 | 176 | 3.23e-28 | 111 |
| Msa0325430 | AT1G78620.1 | 63.043 | 92 | 25 | 1 | 39 | 121 | 133 | 224 | 6.80e-27 | 108 |
| Msa0325430 | AT1G78620.2 | 60.204 | 98 | 30 | 1 | 33 | 121 | 136 | 233 | 9.72e-27 | 108 |
| Msa0325430 | AT4G21010.1 | 50.413 | 121 | 53 | 4 | 113 | 230 | 8 | 124 | 2.55e-18 | 84.0 |
Find 71 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTACATTATGGTGTATT+AGG | 0.247651 | 2_4:+32866331 | Msa0325430:CDS |
| GCAGCCACCACCGGAGTATT+AGG | 0.268237 | 2_4:-32864582 | None:intergenic |
| AGGGGTCCAGGGAGTGTAAT+TGG | 0.309595 | 2_4:+32863084 | Msa0325430:CDS |
| CTTCAAACCCTACTATTTAC+CGG | 0.331149 | 2_4:+32866244 | Msa0325430:CDS |
| CGCTCCATCTGAGCACCAAC+GGG | 0.368841 | 2_4:-32864699 | None:intergenic |
| CATACTTCATTTATTTGCTC+TGG | 0.378031 | 2_4:-32865236 | None:intergenic |
| GCTTTGTCCCGGTAAATAGT+AGG | 0.385439 | 2_4:-32866252 | None:intergenic |
| TGCAATTGAAAGGGCGGTTA+AGG | 0.401505 | 2_4:+32866201 | Msa0325430:CDS |
| GAAAATGCATCTCTACATTA+TGG | 0.412312 | 2_4:+32866322 | Msa0325430:CDS |
| CTAGCAATTCAGCTCAAACT+AGG | 0.421052 | 2_4:+32866371 | Msa0325430:CDS |
| AGAAAAGGAAGAAGGGGTCC+AGG | 0.424572 | 2_4:+32863072 | Msa0325430:CDS |
| ATGCGTTGTGGAACACCAAC+GGG | 0.428183 | 2_4:+32866124 | Msa0325430:CDS |
| GTGTTTGTTTAGGGTACAGC+TGG | 0.432468 | 2_4:+32863027 | Msa0325430:intron |
| GTATTATACCACTATATTAC+AGG | 0.432916 | 2_4:-32866445 | None:intergenic |
| GTTAAGGCACCAACTATTGC+CGG | 0.433899 | 2_4:+32866217 | Msa0325430:CDS |
| GCTGCAAATGCTTCATCAAA+TGG | 0.435679 | 2_4:+32864600 | Msa0325430:CDS |
| TAGGGTACAGCTGGAACAAA+AGG | 0.436184 | 2_4:+32863036 | Msa0325430:intron |
| CTGAAATCTCCTTCCAAAAG+TGG | 0.457769 | 2_4:-32865506 | None:intergenic |
| TAGTAGGGTTTGAAGTAATC+CGG | 0.457922 | 2_4:-32866236 | None:intergenic |
| TTTCTCAGCTTTGGAGACTT+GGG | 0.460386 | 2_4:+32863169 | Msa0325430:CDS |
| CAGAATTTGAGGGAGGGGAG+TGG | 0.461437 | 2_4:+32861600 | Msa0325430:intron |
| CTGAGAAAAGAAAAGGAAGA+AGG | 0.478719 | 2_4:+32863064 | Msa0325430:CDS |
| AGGGATTCAAGCTTTGCTGC+AGG | 0.485529 | 2_4:+32866391 | Msa0325430:CDS |
| AGAATTGCGTCGAGCAAAGT+TGG | 0.491272 | 2_4:+32864549 | Msa0325430:CDS |
| CTTTGTCCCGGTAAATAGTA+GGG | 0.497495 | 2_4:-32866251 | None:intergenic |
| TTCAAACCCTACTATTTACC+GGG | 0.497622 | 2_4:+32866245 | Msa0325430:CDS |
| GGGGTTGCTGAGAAAAGAAA+AGG | 0.497980 | 2_4:+32863057 | Msa0325430:CDS |
| TGAAGTAATCCGGCAATAGT+TGG | 0.499205 | 2_4:-32866226 | None:intergenic |
| GAGGTTCAGCTGCAATTGAA+AGG | 0.514449 | 2_4:+32866191 | Msa0325430:CDS |
| GGATTCAAGCTTTGCTGCAG+GGG | 0.516848 | 2_4:+32866393 | Msa0325430:CDS |
| CTGTATCCAATTACACTCCC+TGG | 0.520035 | 2_4:-32863090 | None:intergenic |
| GGGATTCAAGCTTTGCTGCA+GGG | 0.523093 | 2_4:+32866392 | Msa0325430:CDS |
| AGGGTACAGCTGGAACAAAA+GGG | 0.526901 | 2_4:+32863037 | Msa0325430:intron |
| GAAGCATTTGCAGCCACCAC+CGG | 0.530483 | 2_4:-32864591 | None:intergenic |
| ACGTCTAGATCGCTTTGTCC+CGG | 0.534083 | 2_4:-32866263 | None:intergenic |
| TAGCAATTCAGCTCAAACTA+GGG | 0.535704 | 2_4:+32866372 | Msa0325430:CDS |
| GAGGAAAGCACAAACGCAAT+CGG | 0.535952 | 2_4:-32863118 | None:intergenic |
| TGAGACTGTGTCACTCAACT+TGG | 0.545176 | 2_4:-32863211 | None:intergenic |
| ACTGCATTCTCCTTGCCCGT+TGG | 0.551429 | 2_4:-32866139 | None:intergenic |
| CATTATGGTGTATTAGGTGT+AGG | 0.552166 | 2_4:+32866337 | Msa0325430:CDS |
| TATCTGTCACTACGGCGCTA+TGG | 0.558258 | 2_4:+32862308 | Msa0325430:CDS |
| GAAAAGGAAGAAGGGGTCCA+GGG | 0.558281 | 2_4:+32863073 | Msa0325430:CDS |
| TGTTATTGATCTATTGCTTG+AGG | 0.558507 | 2_4:+32864722 | Msa0325430:CDS |
| TTGTGGAACACCAACGGGCA+AGG | 0.564559 | 2_4:+32866129 | Msa0325430:CDS |
| ACGCTCCATCTGAGCACCAA+CGG | 0.570793 | 2_4:-32864700 | None:intergenic |
| TGAGAAAAGAAAAGGAAGAA+GGG | 0.576058 | 2_4:+32863065 | Msa0325430:CDS |
| AAAACCTAATACTCCGGTGG+TGG | 0.582600 | 2_4:+32864578 | Msa0325430:CDS |
| AGGTTCAGCTGCAATTGAAA+GGG | 0.584279 | 2_4:+32866192 | Msa0325430:CDS |
| GATGCGTTGTGGAACACCAA+CGG | 0.586704 | 2_4:+32866123 | Msa0325430:CDS |
| TAGCAGAAAACCTAATACTC+CGG | 0.589094 | 2_4:+32864572 | Msa0325430:CDS |
| TGAGAAGGAGAAATTTGAAG+AGG | 0.591853 | 2_4:+32861644 | Msa0325430:CDS |
| AAGTATGCTATGTTGATATG+AGG | 0.595797 | 2_4:+32865252 | Msa0325430:CDS |
| ATTAGGTGTAGGCTATGCAT+TGG | 0.596170 | 2_4:+32866348 | Msa0325430:CDS |
| AAATCATGTGCAAAATGAGA+AGG | 0.599565 | 2_4:+32861629 | Msa0325430:CDS |
| TTCAGCTGCAATTGAAAGGG+CGG | 0.609680 | 2_4:+32866195 | Msa0325430:CDS |
| TTATGGAATATCTGTCACTA+CGG | 0.625580 | 2_4:+32862300 | Msa0325430:CDS |
| CTCGAGTTATGTCGAAGTGG+AGG | 0.626135 | 2_4:+32866172 | Msa0325430:CDS |
| CTATATTACAGGTACAGAGA+TGG | 0.627725 | 2_4:-32866434 | None:intergenic |
| GGGTACAGCTGGAACAAAAG+GGG | 0.630163 | 2_4:+32863038 | Msa0325430:intron |
| GAGAAAAGAAAAGGAAGAAG+GGG | 0.634746 | 2_4:+32863066 | Msa0325430:CDS |
| ACAGGTACAGAGATGGACAT+TGG | 0.635671 | 2_4:-32866427 | None:intergenic |
| AAACACTATAGCAAGTGAAG+CGG | 0.655689 | 2_4:-32866290 | None:intergenic |
| AATTCTCAAATGATACTGAG+AGG | 0.667400 | 2_4:+32864646 | Msa0325430:CDS |
| CTCCATCTGAGCACCAACGG+GGG | 0.668583 | 2_4:-32864697 | None:intergenic |
| TTGCTCGAGTTATGTCGAAG+TGG | 0.672460 | 2_4:+32866169 | Msa0325430:CDS |
| TACGGCGCTATGGCAGATTG+CGG | 0.677578 | 2_4:+32862318 | Msa0325430:CDS |
| TTGATAGGAATGATGCGTTG+TGG | 0.684688 | 2_4:+32866112 | Msa0325430:intron |
| GCTCCATCTGAGCACCAACG+GGG | 0.691668 | 2_4:-32864698 | None:intergenic |
| CAGAAAACCTAATACTCCGG+TGG | 0.697637 | 2_4:+32864575 | Msa0325430:CDS |
| GCAAGATGGTTCTACCTACG+TGG | 0.709144 | 2_4:+32865475 | Msa0325430:intron |
| AAGTGGTAACAAAACCACGT+AGG | 0.744385 | 2_4:-32865489 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAATATCATATTGTTA+CGG | - | chr2_4:32861728-32861747 | None:intergenic | 10.0% |
| !!! | AAATATTAATCCATTTTATT+GGG | - | chr2_4:32863847-32863866 | None:intergenic | 10.0% |
| !!! | AAAATATTAATCCATTTTAT+TGG | - | chr2_4:32863848-32863867 | None:intergenic | 10.0% |
| !!! | ATTAATATTTTACTGAATAA+GGG | + | chr2_4:32863857-32863876 | Msa0325430:intron | 10.0% |
| !!! | TTTCTATAGTTATCTTTTTT+TGG | + | chr2_4:32861562-32861581 | Msa0325430:intron | 15.0% |
| !!! | ATGAAAATTTTCATTGTTTT+TGG | + | chr2_4:32862961-32862980 | Msa0325430:intron | 15.0% |
| !!! | AACATTAAGTTTTGAATTTT+AGG | + | chr2_4:32863551-32863570 | Msa0325430:intron | 15.0% |
| !! | ATTAAAGTATGCTAAAAAAT+TGG | + | chr2_4:32863617-32863636 | Msa0325430:intron | 15.0% |
| !!! | ATATTTGAATTTTTAGTTAG+TGG | + | chr2_4:32863812-32863831 | Msa0325430:intron | 15.0% |
| !!! | GATTAATATTTTACTGAATA+AGG | + | chr2_4:32863856-32863875 | Msa0325430:intron | 15.0% |
| !! | ATGAAAAAAAAATGAAACAT+TGG | - | chr2_4:32863949-32863968 | None:intergenic | 15.0% |
| !!! | TTTCTTCTACATTATTTTAA+TGG | + | chr2_4:32865453-32865472 | Msa0325430:intron | 15.0% |
| !!! | ATACTGGGAATTTTTTTTTA+TGG | - | chr2_4:32861419-32861438 | None:intergenic | 20.0% |
| !! | CAAAGAAAGAATTTCTTTAT+TGG | - | chr2_4:32861458-32861477 | None:intergenic | 20.0% |
| !!! | TATAGTTATCTTTTTTTGGT+AGG | + | chr2_4:32861566-32861585 | Msa0325430:intron | 20.0% |
| !!! | TATTTCTTTTTCAGAATTTG+AGG | + | chr2_4:32861589-32861608 | Msa0325430:intron | 20.0% |
| !!! | ATTTCTTTTTCAGAATTTGA+GGG | + | chr2_4:32861590-32861609 | Msa0325430:intron | 20.0% |
| !!! | GTTATTTTCTGTTACTTTAA+AGG | + | chr2_4:32861693-32861712 | Msa0325430:intron | 20.0% |
| !! | TATAAACTTAAAAATCAGGA+GGG | - | chr2_4:32861830-32861849 | None:intergenic | 20.0% |
| !!! | CAAGTTTAAGTTGTTAATTT+GGG | + | chr2_4:32861894-32861913 | Msa0325430:intron | 20.0% |
| !!! | TATAATTCTGGTTCTTTTAT+AGG | + | chr2_4:32862547-32862566 | Msa0325430:intron | 20.0% |
| !! | TTCATTATCAAAATGAAAAC+AGG | - | chr2_4:32862728-32862747 | None:intergenic | 20.0% |
| !!! | TTTGATAATGAACTTAATTC+TGG | + | chr2_4:32862736-32862755 | Msa0325430:intron | 20.0% |
| !!! | TTTTATACTTTAGAGTTGAT+TGG | + | chr2_4:32863000-32863019 | Msa0325430:intron | 20.0% |
| !! | TGTTTCATTGTGTTAAAAAT+TGG | + | chr2_4:32863479-32863498 | Msa0325430:intron | 20.0% |
| !! | GTTTCATTGTGTTAAAAATT+GGG | + | chr2_4:32863480-32863499 | Msa0325430:intron | 20.0% |
| !!! | TTTTAGCATACTTTAATTTC+AGG | - | chr2_4:32863614-32863633 | None:intergenic | 20.0% |
| !! | TTTACAGAGAAATAAACAAA+TGG | - | chr2_4:32863979-32863998 | None:intergenic | 20.0% |
| !! | CATTAAGAAAGGATATAAAT+TGG | + | chr2_4:32864193-32864212 | Msa0325430:intron | 20.0% |
| !!! | TATTAGTTTCAATTTGCAAT+TGG | - | chr2_4:32864954-32864973 | None:intergenic | 20.0% |
| !! | CAAATTGAAACTAATATGTT+TGG | + | chr2_4:32864958-32864977 | Msa0325430:intron | 20.0% |
| !! | AAAGTTTATCACTGTAAATT+AGG | - | chr2_4:32865963-32865982 | None:intergenic | 20.0% |
| !! | TGAACAAAGAAAAAAATTGA+TGG | - | chr2_4:32866019-32866038 | None:intergenic | 20.0% |
| ! | TTTCCAGAAATTTAACCAAT+TGG | + | chr2_4:32861390-32861409 | Msa0325430:intron | 25.0% |
| ! | ACATAATTGAATTCACACAA+GGG | - | chr2_4:32861500-32861519 | None:intergenic | 25.0% |
| ! | TTCAATTATGTCCTTTGATT+TGG | + | chr2_4:32861509-32861528 | Msa0325430:intron | 25.0% |
| ! | ATTTGAAGAGGTAATTCTTA+TGG | + | chr2_4:32861656-32861675 | Msa0325430:intron | 25.0% |
| ! | TAGAGTGAATAAATCCATTA+AGG | + | chr2_4:32861773-32861792 | Msa0325430:intron | 25.0% |
| ! | CTATAAACTTAAAAATCAGG+AGG | - | chr2_4:32861831-32861850 | None:intergenic | 25.0% |
| ! | CAGCTATAAACTTAAAAATC+AGG | - | chr2_4:32861834-32861853 | None:intergenic | 25.0% |
| !!! | TTAATTTGTGCAACTTGATA+TGG | + | chr2_4:32861871-32861890 | Msa0325430:intron | 25.0% |
| !!! | GCAAGTTTAAGTTGTTAATT+TGG | + | chr2_4:32861893-32861912 | Msa0325430:intron | 25.0% |
| !!! | GTTACTTTGTATTGTGTTTT+AGG | + | chr2_4:32861916-32861935 | Msa0325430:intron | 25.0% |
| !!! | TGATTCCATTTTTGTTCTAT+AGG | + | chr2_4:32862094-32862113 | Msa0325430:intron | 25.0% |
| ! | AAAAGCCTATAGAACAAAAA+TGG | - | chr2_4:32862102-32862121 | None:intergenic | 25.0% |
| ! | AAAAAAGAAGTCAAATGAGA+AGG | + | chr2_4:32862173-32862192 | Msa0325430:intron | 25.0% |
| ! | CATGTTATAGCAGAAAATAT+GGG | - | chr2_4:32862388-32862407 | None:intergenic | 25.0% |
| !!! | GAACTTGATTTGGTTTATTA+AGG | + | chr2_4:32862678-32862697 | Msa0325430:intron | 25.0% |
| !! | TATTAAGGTCTGTAGAATTT+TGG | + | chr2_4:32862693-32862712 | Msa0325430:intron | 25.0% |
| !! | ATTAAGGTCTGTAGAATTTT+GGG | + | chr2_4:32862694-32862713 | Msa0325430:intron | 25.0% |
| ! | TGTCTATGCAATTATGATAA+TGG | + | chr2_4:32862936-32862955 | Msa0325430:intron | 25.0% |
| !!! | TTTTCATTGTTTTTGGTTCT+AGG | + | chr2_4:32862968-32862987 | Msa0325430:intron | 25.0% |
| !!! | TTTCATTGTTTTTGGTTCTA+GGG | + | chr2_4:32862969-32862988 | Msa0325430:intron | 25.0% |
| !! | TAGATATATGTTAGTTTCCA+AGG | + | chr2_4:32863295-32863314 | Msa0325430:intron | 25.0% |
| !!! | AGTTTTAAGTATGAAGTTCA+GGG | - | chr2_4:32863327-32863346 | None:intergenic | 25.0% |
| !!! | ATTTGGTTTTGATTCCAAAT+TGG | + | chr2_4:32863512-32863531 | Msa0325430:intron | 25.0% |
| !!! | TTTGGTTTTGATTCCAAATT+GGG | + | chr2_4:32863513-32863532 | Msa0325430:intron | 25.0% |
| ! | GTTTCAAAAATTCCAAATCA+TGG | - | chr2_4:32863726-32863745 | None:intergenic | 25.0% |
| ! | GTTCAAATGCACAATTTATT+TGG | + | chr2_4:32863764-32863783 | Msa0325430:intron | 25.0% |
| ! | AATGGAAGAAATTCAAAAAC+TGG | + | chr2_4:32864618-32864637 | Msa0325430:CDS | 25.0% |
| ! | TAATTATTGTTAGTGACTTG+CGG | + | chr2_4:32864790-32864809 | Msa0325430:intron | 25.0% |
| !! | ATTTCTCAATATGTTTTGCT+GGG | - | chr2_4:32865062-32865081 | None:intergenic | 25.0% |
| !! | AATTTCTCAATATGTTTTGC+TGG | - | chr2_4:32865063-32865082 | None:intergenic | 25.0% |
| !! | TCGTTAAAACCATATTGATT+TGG | + | chr2_4:32865176-32865195 | Msa0325430:intron | 25.0% |
| !! | ATGAAGAAGTTATTTGCTAA+AGG | - | chr2_4:32865400-32865419 | None:intergenic | 25.0% |
| !!! | ACATTATTTTAATGGCAAGA+TGG | + | chr2_4:32865461-32865480 | Msa0325430:intron | 25.0% |
| !!! | GCATTTGTTATAACTTCATA+AGG | - | chr2_4:32865805-32865824 | None:intergenic | 25.0% |
| !!! | ATCTTTTTGTTTGCTTTGTT+TGG | + | chr2_4:32866088-32866107 | Msa0325430:intron | 25.0% |
| !!! | TTTTTTTTATGGCGACCAAT+TGG | - | chr2_4:32861408-32861427 | None:intergenic | 30.0% |
| TTTCTTTATTGGTCATGTGT+TGG | - | chr2_4:32861447-32861466 | None:intergenic | 30.0% | |
| GACATAATTGAATTCACACA+AGG | - | chr2_4:32861501-32861520 | None:intergenic | 30.0% | |
| !! | AATTATGTCCTTTGATTTGG+TGG | + | chr2_4:32861512-32861531 | Msa0325430:intron | 30.0% |
| AATGAAATCCACCAAATCAA+AGG | - | chr2_4:32861523-32861542 | None:intergenic | 30.0% | |
| !! | ATTTGGTGGATTTCATTTCT+TGG | + | chr2_4:32861526-32861545 | Msa0325430:intron | 30.0% |
| AAATCATGTGCAAAATGAGA+AGG | + | chr2_4:32861629-32861648 | Msa0325430:CDS | 30.0% | |
| !! | ACTTTGTATTGTGTTTTAGG+TGG | + | chr2_4:32861919-32861938 | Msa0325430:intron | 30.0% |
| !! | TATTGTGTTTTAGGTGGTAT+AGG | + | chr2_4:32861925-32861944 | Msa0325430:intron | 30.0% |
| TCTTAAACAATCTGAACCAA+AGG | + | chr2_4:32862005-32862024 | Msa0325430:intron | 30.0% | |
| ! | TATTGTTGTAGCACTTTTGA+TGG | + | chr2_4:32862061-32862080 | Msa0325430:intron | 30.0% |
| !! | TTTTGAAGATGCTAAAAGGT+TGG | + | chr2_4:32862118-32862137 | Msa0325430:intron | 30.0% |
| GTGAGATTGCACAATTTATA+AGG | + | chr2_4:32862200-32862219 | Msa0325430:intron | 30.0% | |
| !! | GCTTTTTCTTAGCATTGTTA+TGG | + | chr2_4:32862283-32862302 | Msa0325430:intron | 30.0% |
| TTATGGAATATCTGTCACTA+CGG | + | chr2_4:32862300-32862319 | Msa0325430:CDS | 30.0% | |
| ! | GGTGATAGTTTTTATGTTCT+CGG | + | chr2_4:32862339-32862358 | Msa0325430:CDS | 30.0% |
| ! | AGTTTTTATGTTCTCGGTTA+TGG | + | chr2_4:32862345-32862364 | Msa0325430:CDS | 30.0% |
| CCATGTTATAGCAGAAAATA+TGG | - | chr2_4:32862389-32862408 | None:intergenic | 30.0% | |
| ! | CCATATTTTCTGCTATAACA+TGG | + | chr2_4:32862386-32862405 | Msa0325430:intron | 30.0% |
| ! | GTTACTGATTGGAATTTCTT+AGG | + | chr2_4:32862430-32862449 | Msa0325430:intron | 30.0% |
| ! | TTTCTGTTTGTTAAACCACA+TGG | + | chr2_4:32862493-32862512 | Msa0325430:intron | 30.0% |
| AGAATTATACAGCTTGGTTA+AGG | - | chr2_4:32862536-32862555 | None:intergenic | 30.0% | |
| TTAACCAAGCTGTATAATTC+TGG | + | chr2_4:32862535-32862554 | Msa0325430:intron | 30.0% | |
| ! | CTTTTATAGGATCAGACATT+TGG | + | chr2_4:32862560-32862579 | Msa0325430:intron | 30.0% |
| ! | TTAAGGTCTGTAGAATTTTG+GGG | + | chr2_4:32862695-32862714 | Msa0325430:intron | 30.0% |
| AATGACAGAATCATATCATC+AGG | + | chr2_4:32862843-32862862 | Msa0325430:intron | 30.0% | |
| !! | CACAATTTGGATTTGAGTTT+TGG | + | chr2_4:32862879-32862898 | Msa0325430:intron | 30.0% |
| ! | TTGGAAATTCAAGTTCTACA+AGG | + | chr2_4:32862898-32862917 | Msa0325430:intron | 30.0% |
| !! | TACTTTAGAGTTGATTGGTT+TGG | + | chr2_4:32863005-32863024 | Msa0325430:intron | 30.0% |
| !! | ATTGGTTTGGTGTTTGTTTA+GGG | + | chr2_4:32863018-32863037 | Msa0325430:intron | 30.0% |
| TGAGAAAAGAAAAGGAAGAA+GGG | + | chr2_4:32863065-32863084 | Msa0325430:CDS | 30.0% | |
| !!! | GAGTTTTAAGTATGAAGTTC+AGG | - | chr2_4:32863328-32863347 | None:intergenic | 30.0% |
| AAAAGTTTGATATCCATCGA+AGG | - | chr2_4:32863350-32863369 | None:intergenic | 30.0% | |
| ! | TGTCCTGTTTGAAATTAAAG+TGG | + | chr2_4:32863391-32863410 | Msa0325430:intron | 30.0% |
| ! | GTTCCACTTTAATTTCAAAC+AGG | - | chr2_4:32863397-32863416 | None:intergenic | 30.0% |
| GAAATTAAAGTGGAACAAGA+AGG | + | chr2_4:32863401-32863420 | Msa0325430:intron | 30.0% | |
| !! | ATTGTTTGTTAGCCTTTGTT+TGG | + | chr2_4:32863439-32863458 | Msa0325430:intron | 30.0% |
| CACAATGAAACAATCATCAA+TGG | - | chr2_4:32863471-32863490 | None:intergenic | 30.0% | |
| !! | AAATTGGGTTGACATTCATT+TGG | + | chr2_4:32863495-32863514 | Msa0325430:intron | 30.0% |
| AACTTAATGTTGTTGCACAT+GGG | - | chr2_4:32863542-32863561 | None:intergenic | 30.0% | |
| AAACTTAATGTTGTTGCACA+TGG | - | chr2_4:32863543-32863562 | None:intergenic | 30.0% | |
| CCATTGAACATGTTTATCAA+AGG | - | chr2_4:32863660-32863679 | None:intergenic | 30.0% | |
| CCTTTGATAAACATGTTCAA+TGG | + | chr2_4:32863657-32863676 | Msa0325430:intron | 30.0% | |
| !!! | ATAAGGGTTTTGAAGTTTGT+AGG | + | chr2_4:32863873-32863892 | Msa0325430:intron | 30.0% |
| ! | TTTGAAGTTTGTAGGATTGA+TGG | + | chr2_4:32863881-32863900 | Msa0325430:intron | 30.0% |
| ATATCATAGTTCCAATCTCA+CGG | - | chr2_4:32863909-32863928 | None:intergenic | 30.0% | |
| ! | GAACTATGATATAAAAGTGC+AGG | + | chr2_4:32863917-32863936 | Msa0325430:intron | 30.0% |
| TTCCTTTGTGCATATTTAGA+AGG | + | chr2_4:32864063-32864082 | Msa0325430:intron | 30.0% | |
| ATCCTTCTAAATATGCACAA+AGG | - | chr2_4:32864068-32864087 | None:intergenic | 30.0% | |
| TTTGTGCATATTTAGAAGGA+TGG | + | chr2_4:32864067-32864086 | Msa0325430:intron | 30.0% | |
| CCAACAATTTCTGATTCAAA+TGG | - | chr2_4:32864124-32864143 | None:intergenic | 30.0% | |
| CCATTTGAATCAGAAATTGT+TGG | + | chr2_4:32864121-32864140 | Msa0325430:intron | 30.0% | |
| ATACATGGTGATATCATGTA+TGG | + | chr2_4:32864168-32864187 | Msa0325430:intron | 30.0% | |
| CATGTATGGAACATTAAGAA+AGG | + | chr2_4:32864182-32864201 | Msa0325430:intron | 30.0% | |
| ACAACAGCACAATAATCTTA+AGG | + | chr2_4:32864220-32864239 | Msa0325430:intron | 30.0% | |
| ! | GGTACAAATGTTTGAAACTT+TGG | + | chr2_4:32864254-32864273 | Msa0325430:intron | 30.0% |
| ! | GTTTGAAACTTTGGATACTT+CGG | + | chr2_4:32864263-32864282 | Msa0325430:intron | 30.0% |
| !! | AAGTACAAACTTTTGGGAAA+AGG | - | chr2_4:32864292-32864311 | None:intergenic | 30.0% |
| !! | CAGAGAAAGTACAAACTTTT+GGG | - | chr2_4:32864298-32864317 | None:intergenic | 30.0% |
| !! | TCAGAGAAAGTACAAACTTT+TGG | - | chr2_4:32864299-32864318 | None:intergenic | 30.0% |
| AAAGTTTGTACTTTCTCTGA+AGG | + | chr2_4:32864299-32864318 | Msa0325430:intron | 30.0% | |
| TCTGAAGGACTAATAGATTT+AGG | + | chr2_4:32864314-32864333 | Msa0325430:intron | 30.0% | |
| ! | GGTTTAATGAGTTATTTCAG+AGG | + | chr2_4:32864335-32864354 | Msa0325430:intron | 30.0% |
| AATTCTCAAATGATACTGAG+AGG | + | chr2_4:32864646-32864665 | Msa0325430:CDS | 30.0% | |
| TGTTATTGATCTATTGCTTG+AGG | + | chr2_4:32864722-32864741 | Msa0325430:CDS | 30.0% | |
| ! | TCTATTGCTTGAGGTAATTT+TGG | + | chr2_4:32864731-32864750 | Msa0325430:intron | 30.0% |
| ! | GGTGACTTTTAAGCTATAAT+GGG | - | chr2_4:32864933-32864952 | None:intergenic | 30.0% |
| ! | TGGTGACTTTTAAGCTATAA+TGG | - | chr2_4:32864934-32864953 | None:intergenic | 30.0% |
| !! | AAACTAATATGTTTGGCTTG+TGG | + | chr2_4:32864965-32864984 | Msa0325430:intron | 30.0% |
| AACGAATCAATTCCTAATTG+TGG | - | chr2_4:32865161-32865180 | None:intergenic | 30.0% | |
| !!! | ACCATATTGATTTGGTGTTT+TGG | + | chr2_4:32865184-32865203 | Msa0325430:intron | 30.0% |
| ACCAAAACACCAAATCAATA+TGG | - | chr2_4:32865188-32865207 | None:intergenic | 30.0% | |
| CATACTTCATTTATTTGCTC+TGG | - | chr2_4:32865239-32865258 | None:intergenic | 30.0% | |
| AAGTATGCTATGTTGATATG+AGG | + | chr2_4:32865252-32865271 | Msa0325430:CDS | 30.0% | |
| ATTGAGATTTGTGTTGAAAG+TGG | + | chr2_4:32865560-32865579 | Msa0325430:intron | 30.0% | |
| ! | TACATAACACACATTAGTCT+CGG | - | chr2_4:32865711-32865730 | None:intergenic | 30.0% |
| TGTGTGTTATGTATGATTGT+AGG | + | chr2_4:32865718-32865737 | Msa0325430:intron | 30.0% | |
| TTTGTTCAGTACTATTGAGT+CGG | + | chr2_4:32866031-32866050 | Msa0325430:intron | 30.0% | |
| !! | TTTGCTTTGTTTGGATTGAT+AGG | + | chr2_4:32866097-32866116 | Msa0325430:intron | 30.0% |
| GAAAATGCATCTCTACATTA+TGG | + | chr2_4:32866322-32866341 | Msa0325430:CDS | 30.0% | |
| TCTCTACATTATGGTGTATT+AGG | + | chr2_4:32866331-32866350 | Msa0325430:CDS | 30.0% | |
| CGACCAATTGGTTAAATTTC+TGG | - | chr2_4:32861396-32861415 | None:intergenic | 35.0% | |
| CATGTGTTGGAGATAATACT+GGG | - | chr2_4:32861434-32861453 | None:intergenic | 35.0% | |
| TCATGTGTTGGAGATAATAC+TGG | - | chr2_4:32861435-32861454 | None:intergenic | 35.0% | |
| !! | CATTTCTTGGTTTGTGACTA+TGG | + | chr2_4:32861539-32861558 | Msa0325430:intron | 35.0% |
| !!! | TCTTTTTCAGAATTTGAGGG+AGG | + | chr2_4:32861593-32861612 | Msa0325430:intron | 35.0% |
| !!! | CTTTTTCAGAATTTGAGGGA+GGG | + | chr2_4:32861594-32861613 | Msa0325430:intron | 35.0% |
| !! | TTTTTCAGAATTTGAGGGAG+GGG | + | chr2_4:32861595-32861614 | Msa0325430:intron | 35.0% |
| ! | CTCATTTTGCACATGATTTG+AGG | - | chr2_4:32861628-32861647 | None:intergenic | 35.0% |
| TGAGAAGGAGAAATTTGAAG+AGG | + | chr2_4:32861644-32861663 | Msa0325430:CDS | 35.0% | |
| TTTAGGTGGTATAGGTACAA+AGG | + | chr2_4:32861933-32861952 | Msa0325430:intron | 35.0% | |
| TTAGGTGGTATAGGTACAAA+GGG | + | chr2_4:32861934-32861953 | Msa0325430:intron | 35.0% | |
| !! | GATGGTACTGATCAAGTTAA+TGG | + | chr2_4:32861963-32861982 | Msa0325430:intron | 35.0% |
| TTAGTGGTGTTTAGTGGTTA+AGG | + | chr2_4:32862028-32862047 | Msa0325430:intron | 35.0% | |
| !! | AGGCTTTTGAAGATGCTAAA+AGG | + | chr2_4:32862114-32862133 | Msa0325430:intron | 35.0% |
| CAACATCCAGACATATTGTA+AGG | + | chr2_4:32862227-32862246 | Msa0325430:intron | 35.0% | |
| ATCTCACCTTACAATATGTC+TGG | - | chr2_4:32862236-32862255 | None:intergenic | 35.0% | |
| CATATTGTAAGGTGAGATTC+TGG | + | chr2_4:32862238-32862257 | Msa0325430:intron | 35.0% | |
| ATGTTCTCGGTTATGGTAAA+TGG | + | chr2_4:32862352-32862371 | Msa0325430:intron | 35.0% | |
| GTAACAATTGTCGATCAAGA+AGG | - | chr2_4:32862415-32862434 | None:intergenic | 35.0% | |
| GATCGACAATTGTTACTGAT+TGG | + | chr2_4:32862419-32862438 | Msa0325430:intron | 35.0% | |
| AGAACCAGAATTATACAGCT+TGG | - | chr2_4:32862542-32862561 | None:intergenic | 35.0% | |
| GGATCAGACATTTGGAAAAT+TGG | + | chr2_4:32862568-32862587 | Msa0325430:intron | 35.0% | |
| ! | GATTTAGAGTCCTTGAATCT+TGG | + | chr2_4:32862590-32862609 | Msa0325430:intron | 35.0% |
| !! | TTCTGGCTAGCACTTTTAAT+TGG | + | chr2_4:32862753-32862772 | Msa0325430:intron | 35.0% |
| TAATGCTGCAGATCACAATT+TGG | + | chr2_4:32862866-32862885 | Msa0325430:intron | 35.0% | |
| !! | GATTGGTTTGGTGTTTGTTT+AGG | + | chr2_4:32863017-32863036 | Msa0325430:intron | 35.0% |
| CTGAGAAAAGAAAAGGAAGA+AGG | + | chr2_4:32863064-32863083 | Msa0325430:CDS | 35.0% | |
| GAGAAAAGAAAAGGAAGAAG+GGG | + | chr2_4:32863066-32863085 | Msa0325430:CDS | 35.0% | |
| ! | TGTGCTTTCCTCACAATTTT+TGG | + | chr2_4:32863129-32863148 | Msa0325430:CDS | 35.0% |
| !!! | TTCCTCACAATTTTTGGAGT+TGG | + | chr2_4:32863135-32863154 | Msa0325430:CDS | 35.0% |
| AGTGAGATAGGCAAAACATA+TGG | + | chr2_4:32863234-32863253 | Msa0325430:intron | 35.0% | |
| CATACTTAAAACTCCTTCGA+TGG | + | chr2_4:32863334-32863353 | Msa0325430:intron | 35.0% | |
| CAATGGAAGTAACCAAACAA+AGG | - | chr2_4:32863454-32863473 | None:intergenic | 35.0% | |
| ATGTTCAATGGCATGTTACA+TGG | + | chr2_4:32863669-32863688 | Msa0325430:intron | 35.0% | |
| !! | CTTGATGATGAACCATGATT+TGG | + | chr2_4:32863711-32863730 | Msa0325430:intron | 35.0% |
| GAACAAAATATGACTGTGAG+TGG | - | chr2_4:32863748-32863767 | None:intergenic | 35.0% | |
| ! | GACTAAAGTGCCCAATAAAA+TGG | + | chr2_4:32863834-32863853 | Msa0325430:intron | 35.0% |
| TCAGAAATTGTTGGCAAGTT+TGG | + | chr2_4:32864130-32864149 | Msa0325430:intron | 35.0% | |
| CAGAAATTGTTGGCAAGTTT+GGG | + | chr2_4:32864131-32864150 | Msa0325430:intron | 35.0% | |
| AATCTTAAGGAGACAGAAAC+AGG | + | chr2_4:32864233-32864252 | Msa0325430:intron | 35.0% | |
| GAAGCACATTTGAATGTTTG+TGG | + | chr2_4:32864470-32864489 | Msa0325430:intron | 35.0% | |
| TAGCAGAAAACCTAATACTC+CGG | + | chr2_4:32864572-32864591 | Msa0325430:CDS | 35.0% | |
| !! | TGATTTTGATGCATGAGATG+AGG | + | chr2_4:32864824-32864843 | Msa0325430:intron | 35.0% |
| !! | GATTTTGATGCATGAGATGA+GGG | + | chr2_4:32864825-32864844 | Msa0325430:intron | 35.0% |
| TAACCTCAAACTTAACAGCT+GGG | - | chr2_4:32864905-32864924 | None:intergenic | 35.0% | |
| TTAACCTCAAACTTAACAGC+TGG | - | chr2_4:32864906-32864925 | None:intergenic | 35.0% | |
| TGAAGCTTCAACAAAATCAC+AGG | - | chr2_4:32864992-32865011 | None:intergenic | 35.0% | |
| ACCAATGAAAGTCCACAATT+AGG | + | chr2_4:32865146-32865165 | Msa0325430:intron | 35.0% | |
| TCCTAATTGTGGACTTTCAT+TGG | - | chr2_4:32865150-32865169 | None:intergenic | 35.0% | |
| !! | GTTTTGTTACCACTTTTGGA+AGG | + | chr2_4:32865497-32865516 | Msa0325430:CDS | 35.0% |
| !! | ACTTTTGGAAGGAGATTTCA+GGG | + | chr2_4:32865508-32865527 | Msa0325430:CDS | 35.0% |
| !! | GGACTCATTTGGTGTTTATT+GGG | + | chr2_4:32865767-32865786 | Msa0325430:intron | 35.0% |
| !! | GACTCATTTGGTGTTTATTG+GGG | + | chr2_4:32865768-32865787 | Msa0325430:intron | 35.0% |
| TGTCAAACTCACTTGATCAA+AGG | - | chr2_4:32865832-32865851 | None:intergenic | 35.0% | |
| TGTTCCATTAGTGCAGTATT+AGG | + | chr2_4:32865905-32865924 | Msa0325430:intron | 35.0% | |
| AAGTCCTAATACTGCACTAA+TGG | - | chr2_4:32865912-32865931 | None:intergenic | 35.0% | |
| TTGTTCAGTACTATTGAGTC+GGG | + | chr2_4:32866032-32866051 | Msa0325430:intron | 35.0% | |
| ! | TAGTAGGGTTTGAAGTAATC+CGG | - | chr2_4:32866239-32866258 | None:intergenic | 35.0% |
| CTTCAAACCCTACTATTTAC+CGG | + | chr2_4:32866244-32866263 | Msa0325430:CDS | 35.0% | |
| TTCAAACCCTACTATTTACC+GGG | + | chr2_4:32866245-32866264 | Msa0325430:CDS | 35.0% | |
| AAACACTATAGCAAGTGAAG+CGG | - | chr2_4:32866293-32866312 | None:intergenic | 35.0% | |
| CATTATGGTGTATTAGGTGT+AGG | + | chr2_4:32866337-32866356 | Msa0325430:CDS | 35.0% | |
| TAGCAATTCAGCTCAAACTA+GGG | + | chr2_4:32866372-32866391 | Msa0325430:CDS | 35.0% | |
| TAACTTGACGTGTTCTTGAC+AGG | + | chr2_4:32861745-32861764 | Msa0325430:intron | 40.0% | |
| AGGTACAAAGGGAATGATGA+TGG | + | chr2_4:32861945-32861964 | Msa0325430:intron | 40.0% | |
| CAATCTGAACCAAAGGTTAG+TGG | + | chr2_4:32862012-32862031 | Msa0325430:intron | 40.0% | |
| CACTAAACACCACTAACCTT+TGG | - | chr2_4:32862024-32862043 | None:intergenic | 40.0% | |
| CAAAGGTTAGTGGTGTTTAG+TGG | + | chr2_4:32862022-32862041 | Msa0325430:intron | 40.0% | |
| ! | AAGGTTGGTCAATCAAGAGA+AGG | + | chr2_4:32862133-32862152 | Msa0325430:intron | 40.0% |
| CAGTGACAATCCAAGATTCA+AGG | - | chr2_4:32862603-32862622 | None:intergenic | 40.0% | |
| CTTGAATCTTGGATTGTCAC+TGG | + | chr2_4:32862601-32862620 | Msa0325430:intron | 40.0% | |
| GTAGGACTACGAACTTGATT+TGG | + | chr2_4:32862668-32862687 | Msa0325430:intron | 40.0% | |
| CTCCAACTCCAAAAATTGTG+AGG | - | chr2_4:32863140-32863159 | None:intergenic | 40.0% | |
| !!! | CTCACAATTTTTGGAGTTGG+AGG | + | chr2_4:32863138-32863157 | Msa0325430:CDS | 40.0% |
| !!! | AATTTTTGGAGTTGGAGGAG+CGG | + | chr2_4:32863143-32863162 | Msa0325430:CDS | 40.0% |
| !!! | TTTTCTCAGCTTTGGAGACT+TGG | + | chr2_4:32863168-32863187 | Msa0325430:CDS | 40.0% |
| !! | TTTCTCAGCTTTGGAGACTT+GGG | + | chr2_4:32863169-32863188 | Msa0325430:CDS | 40.0% |
| ACTAACGCTGCATATAGTGA+TGG | - | chr2_4:32864382-32864401 | None:intergenic | 40.0% | |
| GCACATTTGAATGTTTGTGG+CGG | + | chr2_4:32864473-32864492 | Msa0325430:intron | 40.0% | |
| GCTGCAAATGCTTCATCAAA+TGG | + | chr2_4:32864600-32864619 | Msa0325430:CDS | 40.0% | |
| ! | TCTCAATATGTTTTGCTGGG+CGG | - | chr2_4:32865059-32865078 | None:intergenic | 40.0% |
| !!! | TGGTGTTTTGGTTTGCTGAT+AGG | + | chr2_4:32865196-32865215 | Msa0325430:intron | 40.0% |
| ! | AAGATGTTTCTGAGAGTCTG+AGG | + | chr2_4:32865281-32865300 | Msa0325430:intron | 40.0% |
| AAACCAAACGTAGCATACGA+CGG | + | chr2_4:32865307-32865326 | Msa0325430:intron | 40.0% | |
| AAGTGGTAACAAAACCACGT+AGG | - | chr2_4:32865492-32865511 | None:intergenic | 40.0% | |
| !!! | CGTGGTTTTGTTACCACTTT+TGG | + | chr2_4:32865493-32865512 | Msa0325430:CDS | 40.0% |
| CTGAAATCTCCTTCCAAAAG+TGG | - | chr2_4:32865509-32865528 | None:intergenic | 40.0% | |
| !! | CACTTTTGGAAGGAGATTTC+AGG | + | chr2_4:32865507-32865526 | Msa0325430:CDS | 40.0% |
| AGATTTCAGGGTTGTTCTTC+AGG | + | chr2_4:32865520-32865539 | Msa0325430:intron | 40.0% | |
| GATTTCAGGGTTGTTCTTCA+GGG | + | chr2_4:32865521-32865540 | Msa0325430:intron | 40.0% | |
| ATTTCAGGGTTGTTCTTCAG+GGG | + | chr2_4:32865522-32865541 | Msa0325430:intron | 40.0% | |
| CAATGGTAGAAACAAATCCC+CGG | + | chr2_4:32865665-32865684 | Msa0325430:intron | 40.0% | |
| !! | GGGACTCATTTGGTGTTTAT+TGG | + | chr2_4:32865766-32865785 | Msa0325430:intron | 40.0% |
| TTGATAGGAATGATGCGTTG+TGG | + | chr2_4:32866112-32866131 | Msa0325430:intron | 40.0% | |
| AGGTTCAGCTGCAATTGAAA+GGG | + | chr2_4:32866192-32866211 | Msa0325430:CDS | 40.0% | |
| TGAAGTAATCCGGCAATAGT+TGG | - | chr2_4:32866229-32866248 | None:intergenic | 40.0% | |
| CTTTGTCCCGGTAAATAGTA+GGG | - | chr2_4:32866254-32866273 | None:intergenic | 40.0% | |
| ATTAGGTGTAGGCTATGCAT+TGG | + | chr2_4:32866348-32866367 | Msa0325430:CDS | 40.0% | |
| CTAGCAATTCAGCTCAAACT+AGG | + | chr2_4:32866371-32866390 | Msa0325430:CDS | 40.0% | |
| CATTTCCCATCTCTCATGCA+AGG | + | chr2_4:32862466-32862485 | Msa0325430:intron | 45.0% | |
| ACTCACCTTGCATGAGAGAT+GGG | - | chr2_4:32862474-32862493 | None:intergenic | 45.0% | |
| AACTCACCTTGCATGAGAGA+TGG | - | chr2_4:32862475-32862494 | None:intergenic | 45.0% | |
| ! | GTGTTTGTTTAGGGTACAGC+TGG | + | chr2_4:32863027-32863046 | Msa0325430:intron | 45.0% |
| TAGGGTACAGCTGGAACAAA+AGG | + | chr2_4:32863036-32863055 | Msa0325430:intron | 45.0% | |
| AGGGTACAGCTGGAACAAAA+GGG | + | chr2_4:32863037-32863056 | Msa0325430:intron | 45.0% | |
| GGGGTTGCTGAGAAAAGAAA+AGG | + | chr2_4:32863057-32863076 | Msa0325430:CDS | 45.0% | |
| CTGTATCCAATTACACTCCC+TGG | - | chr2_4:32863093-32863112 | None:intergenic | 45.0% | |
| ! | GAGGAAAGCACAAACGCAAT+CGG | - | chr2_4:32863121-32863140 | None:intergenic | 45.0% |
| ! | TGAGACTGTGTCACTCAACT+TGG | - | chr2_4:32863214-32863233 | None:intergenic | 45.0% |
| GACACAGTCTCAAGTGAGAT+AGG | + | chr2_4:32863222-32863241 | Msa0325430:intron | 45.0% | |
| GAAGTTCAGGGTTTGATCCT+TGG | - | chr2_4:32863315-32863334 | None:intergenic | 45.0% | |
| TGCACATGGGAATCCCAATT+TGG | - | chr2_4:32863529-32863548 | None:intergenic | 45.0% | |
| ! | GATTGATGGTTCCGTGAGAT+TGG | + | chr2_4:32863895-32863914 | Msa0325430:intron | 45.0% |
| ! | GTAGCGCTGAAGAAGATACA+TGG | + | chr2_4:32864153-32864172 | Msa0325430:intron | 45.0% |
| TCTAGCCACACATTGTGTCA+TGG | + | chr2_4:32864443-32864462 | Msa0325430:intron | 45.0% | |
| ! | TTGTGGCGGAAAAGCTAGAT+AGG | + | chr2_4:32864487-32864506 | Msa0325430:intron | 45.0% |
| AGAATTGCGTCGAGCAAAGT+TGG | + | chr2_4:32864549-32864568 | Msa0325430:CDS | 45.0% | |
| CAGAAAACCTAATACTCCGG+TGG | + | chr2_4:32864575-32864594 | Msa0325430:CDS | 45.0% | |
| AAAACCTAATACTCCGGTGG+TGG | + | chr2_4:32864578-32864597 | Msa0325430:CDS | 45.0% | |
| AATATACGTAAAGCCCCCGT+TGG | + | chr2_4:32864684-32864703 | Msa0325430:CDS | 45.0% | |
| AAGCCCAGCTGTTAAGTTTG+AGG | + | chr2_4:32864899-32864918 | Msa0325430:intron | 45.0% | |
| AACCAAACGTAGCATACGAC+GGG | + | chr2_4:32865308-32865327 | Msa0325430:intron | 45.0% | |
| CGTGTATTCTCTGCTCACAA+TGG | + | chr2_4:32865648-32865667 | Msa0325430:intron | 45.0% | |
| TAGAAACAAATCCCCGGAGT+TGG | + | chr2_4:32865671-32865690 | Msa0325430:intron | 45.0% | |
| AGAAACAAATCCCCGGAGTT+GGG | + | chr2_4:32865672-32865691 | Msa0325430:intron | 45.0% | |
| ! | ACACATTAGTCTCGGCATTG+TGG | - | chr2_4:32865703-32865722 | None:intergenic | 45.0% |
| GATTGTAGGTTGTCCTGATG+TGG | + | chr2_4:32865732-32865751 | Msa0325430:intron | 45.0% | |
| CTGATGTGGAGGAATTCGAT+GGG | + | chr2_4:32865746-32865765 | Msa0325430:intron | 45.0% | |
| GGAATTCGATGGGACTCATT+TGG | + | chr2_4:32865756-32865775 | Msa0325430:intron | 45.0% | |
| !! | CATTTGGTGTTTATTGGGGC+TGG | + | chr2_4:32865772-32865791 | Msa0325430:intron | 45.0% |
| TTGCTCGAGTTATGTCGAAG+TGG | + | chr2_4:32866169-32866188 | Msa0325430:CDS | 45.0% | |
| GAGGTTCAGCTGCAATTGAA+AGG | + | chr2_4:32866191-32866210 | Msa0325430:CDS | 45.0% | |
| TTCAGCTGCAATTGAAAGGG+CGG | + | chr2_4:32866195-32866214 | Msa0325430:CDS | 45.0% | |
| TGCAATTGAAAGGGCGGTTA+AGG | + | chr2_4:32866201-32866220 | Msa0325430:CDS | 45.0% | |
| ! | GTTAAGGCACCAACTATTGC+CGG | + | chr2_4:32866217-32866236 | Msa0325430:CDS | 45.0% |
| GCTTTGTCCCGGTAAATAGT+AGG | - | chr2_4:32866255-32866274 | None:intergenic | 45.0% | |
| ACAGGTACAGAGATGGACAT+TGG | - | chr2_4:32866430-32866449 | None:intergenic | 45.0% | |
| CACACAAGGGAGACAGAGAA+AGG | - | chr2_4:32861487-32861506 | None:intergenic | 50.0% | |
| TGCTGTCAGCAACAAGCTTG+CGG | + | chr2_4:32861800-32861819 | Msa0325430:intron | 50.0% | |
| TATCTGTCACTACGGCGCTA+TGG | + | chr2_4:32862308-32862327 | Msa0325430:CDS | 50.0% | |
| CATAGGGTTCATGGTCCATG+TGG | - | chr2_4:32862511-32862530 | None:intergenic | 50.0% | |
| GTTAAGGCGCATAGGGTTCA+TGG | - | chr2_4:32862520-32862539 | None:intergenic | 50.0% | |
| CAGCTTGGTTAAGGCGCATA+GGG | - | chr2_4:32862527-32862546 | None:intergenic | 50.0% | |
| ACAGCTTGGTTAAGGCGCAT+AGG | - | chr2_4:32862528-32862547 | None:intergenic | 50.0% | |
| ACTTCTTCACCAAGCCACTC+AGG | + | chr2_4:32862646-32862665 | Msa0325430:intron | 50.0% | |
| AGTTCGTAGTCCTACCTGAG+TGG | - | chr2_4:32862663-32862682 | None:intergenic | 50.0% | |
| GGGTACAGCTGGAACAAAAG+GGG | + | chr2_4:32863038-32863057 | Msa0325430:intron | 50.0% | |
| AGAAAAGGAAGAAGGGGTCC+AGG | + | chr2_4:32863072-32863091 | Msa0325430:CDS | 50.0% | |
| GAAAAGGAAGAAGGGGTCCA+GGG | + | chr2_4:32863073-32863092 | Msa0325430:CDS | 50.0% | |
| !! | GAGCGGCTTTTTCTCAGCTT+TGG | + | chr2_4:32863160-32863179 | Msa0325430:CDS | 50.0% |
| AGCCACACATTGTGTCATGG+TGG | + | chr2_4:32864446-32864465 | Msa0325430:intron | 50.0% | |
| CTCCACCATGACACAATGTG+TGG | - | chr2_4:32864451-32864470 | None:intergenic | 50.0% | |
| ! | GCAAGATGGTTCTACCTACG+TGG | + | chr2_4:32865475-32865494 | Msa0325430:intron | 50.0% |
| ATTGTGGTCCTACCCAACTC+CGG | - | chr2_4:32865687-32865706 | None:intergenic | 50.0% | |
| TGTAGGTTGTCCTGATGTGG+AGG | + | chr2_4:32865735-32865754 | Msa0325430:intron | 50.0% | |
| CCATCGAATTCCTCCACATC+AGG | - | chr2_4:32865748-32865767 | None:intergenic | 50.0% | |
| CCTGATGTGGAGGAATTCGA+TGG | + | chr2_4:32865745-32865764 | Msa0325430:intron | 50.0% | |
| GATGCGTTGTGGAACACCAA+CGG | + | chr2_4:32866123-32866142 | Msa0325430:CDS | 50.0% | |
| ATGCGTTGTGGAACACCAAC+GGG | + | chr2_4:32866124-32866143 | Msa0325430:CDS | 50.0% | |
| CTCGAGTTATGTCGAAGTGG+AGG | + | chr2_4:32866172-32866191 | Msa0325430:CDS | 50.0% | |
| ACGTCTAGATCGCTTTGTCC+CGG | - | chr2_4:32866266-32866285 | None:intergenic | 50.0% | |
| AGGGATTCAAGCTTTGCTGC+AGG | + | chr2_4:32866391-32866410 | Msa0325430:CDS | 50.0% | |
| GGGATTCAAGCTTTGCTGCA+GGG | + | chr2_4:32866392-32866411 | Msa0325430:CDS | 50.0% | |
| GGATTCAAGCTTTGCTGCAG+GGG | + | chr2_4:32866393-32866412 | Msa0325430:CDS | 50.0% | |
| CAGAATTTGAGGGAGGGGAG+TGG | + | chr2_4:32861600-32861619 | Msa0325430:intron | 55.0% | |
| GCTGACAGCAGGCACCTTAA+TGG | - | chr2_4:32861790-32861809 | None:intergenic | 55.0% | |
| !! | GCAAGCTTGTTGCTGACAGC+AGG | - | chr2_4:32861801-32861820 | None:intergenic | 55.0% |
| TACGGCGCTATGGCAGATTG+CGG | + | chr2_4:32862318-32862337 | Msa0325430:CDS | 55.0% | |
| CTTCACCAAGCCACTCAGGT+AGG | + | chr2_4:32862650-32862669 | Msa0325430:intron | 55.0% | |
| GTAGTCCTACCTGAGTGGCT+TGG | - | chr2_4:32862658-32862677 | None:intergenic | 55.0% | |
| ! | AGGGGTCCAGGGAGTGTAAT+TGG | + | chr2_4:32863084-32863103 | Msa0325430:CDS | 55.0% |
| ! | GAAGCATTTGCAGCCACCAC+CGG | - | chr2_4:32864594-32864613 | None:intergenic | 55.0% |
| ACGCTCCATCTGAGCACCAA+CGG | - | chr2_4:32864703-32864722 | None:intergenic | 55.0% | |
| TGCCCGTCGTATGCTACGTT+TGG | - | chr2_4:32865313-32865332 | None:intergenic | 55.0% | |
| ACGTAGCATACGACGGGCAA+CGG | + | chr2_4:32865314-32865333 | Msa0325430:intron | 55.0% | |
| ACAAATCCCCGGAGTTGGGT+AGG | + | chr2_4:32865676-32865695 | Msa0325430:intron | 55.0% | |
| TTGTGGTCCTACCCAACTCC+GGG | - | chr2_4:32865686-32865705 | None:intergenic | 55.0% | |
| TTGTGGAACACCAACGGGCA+AGG | + | chr2_4:32866129-32866148 | Msa0325430:CDS | 55.0% | |
| ACTGCATTCTCCTTGCCCGT+TGG | - | chr2_4:32866142-32866161 | None:intergenic | 55.0% | |
| ! | GCAGCCACCACCGGAGTATT+AGG | - | chr2_4:32864585-32864604 | None:intergenic | 60.0% |
| CTCCATCTGAGCACCAACGG+GGG | - | chr2_4:32864700-32864719 | None:intergenic | 60.0% | |
| GCTCCATCTGAGCACCAACG+GGG | - | chr2_4:32864701-32864720 | None:intergenic | 60.0% | |
| CGCTCCATCTGAGCACCAAC+GGG | - | chr2_4:32864702-32864721 | None:intergenic | 60.0% | |
| TGTGGTCCTACCCAACTCCG+GGG | - | chr2_4:32865685-32865704 | None:intergenic | 60.0% | |
| ! | AGCCCCCGTTGGTGCTCAGA+TGG | + | chr2_4:32864695-32864714 | Msa0325430:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 32861365 | 32866453 | 32861365 | ID=Msa0325430;Name=Msa0325430 |
| chr2_4 | mRNA | 32861365 | 32866453 | 32861365 | ID=Msa0325430-mRNA-1;Parent=Msa0325430;Name=Msa0325430-mRNA-1;_AED=0.23;_eAED=0.28;_QI=0|0|0|0.62|0.42|0.37|8|0|343 |
| chr2_4 | exon | 32861365 | 32861370 | 32861365 | ID=Msa0325430-mRNA-1:exon:10626;Parent=Msa0325430-mRNA-1 |
| chr2_4 | exon | 32861603 | 32861665 | 32861603 | ID=Msa0325430-mRNA-1:exon:10627;Parent=Msa0325430-mRNA-1 |
| chr2_4 | exon | 32862295 | 32862366 | 32862295 | ID=Msa0325430-mRNA-1:exon:10628;Parent=Msa0325430-mRNA-1 |
| chr2_4 | exon | 32863039 | 32863234 | 32863039 | ID=Msa0325430-mRNA-1:exon:10629;Parent=Msa0325430-mRNA-1 |
| chr2_4 | exon | 32864505 | 32864743 | 32864505 | ID=Msa0325430-mRNA-1:exon:10630;Parent=Msa0325430-mRNA-1 |
| chr2_4 | exon | 32865218 | 32865285 | 32865218 | ID=Msa0325430-mRNA-1:exon:10631;Parent=Msa0325430-mRNA-1 |
| chr2_4 | exon | 32865480 | 32865529 | 32865480 | ID=Msa0325430-mRNA-1:exon:10632;Parent=Msa0325430-mRNA-1 |
| chr2_4 | exon | 32866119 | 32866453 | 32866119 | ID=Msa0325430-mRNA-1:exon:10633;Parent=Msa0325430-mRNA-1 |
| chr2_4 | CDS | 32861365 | 32861370 | 32861365 | ID=Msa0325430-mRNA-1:cds;Parent=Msa0325430-mRNA-1 |
| chr2_4 | CDS | 32861603 | 32861665 | 32861603 | ID=Msa0325430-mRNA-1:cds;Parent=Msa0325430-mRNA-1 |
| chr2_4 | CDS | 32862295 | 32862366 | 32862295 | ID=Msa0325430-mRNA-1:cds;Parent=Msa0325430-mRNA-1 |
| chr2_4 | CDS | 32863039 | 32863234 | 32863039 | ID=Msa0325430-mRNA-1:cds;Parent=Msa0325430-mRNA-1 |
| chr2_4 | CDS | 32864505 | 32864743 | 32864505 | ID=Msa0325430-mRNA-1:cds;Parent=Msa0325430-mRNA-1 |
| chr2_4 | CDS | 32865218 | 32865285 | 32865218 | ID=Msa0325430-mRNA-1:cds;Parent=Msa0325430-mRNA-1 |
| chr2_4 | CDS | 32865480 | 32865529 | 32865480 | ID=Msa0325430-mRNA-1:cds;Parent=Msa0325430-mRNA-1 |
| chr2_4 | CDS | 32866119 | 32866453 | 32866119 | ID=Msa0325430-mRNA-1:cds;Parent=Msa0325430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
