AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0327570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0327570 MtrunA17_Chr2g0308861 99.576 472 2 0 1 472 1 472 0.0 972
Msa0327570 MtrunA17_Chr5g0443521 27.390 387 237 16 90 459 109 468 5.40e-28 116
Msa0327570 MtrunA17_Chr3g0097771 27.390 387 237 17 90 459 115 474 2.35e-26 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0327570 AT2G44350.1 73.118 465 124 1 1 465 1 464 0.0 730
Msa0327570 AT2G44350.4 73.118 465 124 1 1 465 1 464 0.0 730
Msa0327570 AT2G44350.3 72.961 466 124 2 1 465 1 465 0.0 726
Msa0327570 AT2G44350.2 72.961 466 124 2 1 465 1 465 0.0 726
Msa0327570 AT3G60100.2 72.921 469 122 3 1 468 1 465 0.0 710
Msa0327570 AT3G60100.1 72.281 469 120 4 1 468 1 460 0.0 696
Msa0327570 AT3G60100.3 73.821 424 106 3 1 423 1 420 0.0 648
Msa0327570 AT3G58750.1 28.288 403 238 18 61 438 71 447 7.39e-29 119
Msa0327570 AT2G42790.1 27.907 387 235 17 90 459 105 464 2.26e-28 118
Msa0327570 AT3G58740.1 24.277 346 224 13 90 421 107 428 1.29e-19 91.7

Find 130 sgRNAs with CRISPR-Local

Find 515 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATCCACTTGCTCTTTATT+TGG 0.159556 2_4:+39353102 None:intergenic
CCTCTGTATTCTTTCTAAAT+AGG 0.173245 2_4:-39347171 Msa0327570:three_prime_UTR
CATACCATTGGATGATTCTT+TGG 0.185625 2_4:-39350659 Msa0327570:CDS
CTCATAAACTCAAGCATTTC+CGG 0.200318 2_4:+39350595 None:intergenic
TTGAGAATATGTTGGTATTT+AGG 0.213582 2_4:-39347302 Msa0327570:three_prime_UTR
ATAAATGGTGCTTTAATTTC+AGG 0.227190 2_4:+39347461 None:intergenic
TTGGATGATTCTTTGGATTA+TGG 0.241055 2_4:-39350652 Msa0327570:CDS
GAATAAAGGCATTATTGTTT+TGG 0.242772 2_4:-39347201 Msa0327570:three_prime_UTR
GTTCTATTGATTCATCTAAA+TGG 0.244147 2_4:-39355462 Msa0327570:exon
TGTTGTTAACTTGAAAATTT+TGG 0.247238 2_4:-39347400 Msa0327570:three_prime_UTR
ATTGAAATATTTACCTCATC+TGG 0.266300 2_4:+39353592 None:intergenic
AATTGTTCTGTACTTATGTT+TGG 0.284939 2_4:+39349652 None:intergenic
TTGCAGGTTGTGCCTGGATA+TGG 0.296466 2_4:-39348779 Msa0327570:intron
AGAAATATAGTTAAGGAGTT+TGG 0.298747 2_4:-39349679 Msa0327570:CDS
CCTTTATTCTGATGCTCCCT+TGG 0.332132 2_4:+39347215 None:intergenic
GGAACTAGTTCCAGAGTATC+AGG 0.337703 2_4:-39354527 Msa0327570:intron
GTCTCGCTAATTCAGTTAGA+TGG 0.341818 2_4:-39355264 Msa0327570:CDS
AGCTATTATACCGTTCTCTT+TGG 0.356864 2_4:-39347688 Msa0327570:CDS
AGAGCATGGAAGTGTTGAAT+TGG 0.358355 2_4:-39353819 Msa0327570:CDS
GCTGTGTGGGTATAGGTATT+GGG 0.360592 2_4:-39350903 Msa0327570:intron
CTTAGCAATCAACAGATAAA+TGG 0.361994 2_4:+39347446 None:intergenic
AATTTAATTGCTCGTTTGCC+TGG 0.363065 2_4:-39350857 Msa0327570:CDS
GACTGTCAGAAAACACTTCC+AGG 0.363445 2_4:-39353399 Msa0327570:CDS
ACTGGAGAAACTTGAGAAAT+TGG 0.367503 2_4:-39347496 Msa0327570:CDS
CCTCCTATTCTGACCAAGTT+AGG 0.371594 2_4:-39348540 Msa0327570:CDS
GCAAACTATGCTCACATGTT+AGG 0.376742 2_4:-39350628 Msa0327570:CDS
CCAAGGGAGCATCAGAATAA+AGG 0.385123 2_4:-39347215 Msa0327570:three_prime_UTR
CTTTATTCTGATGCTCCCTT+GGG 0.388216 2_4:+39347216 None:intergenic
GAGAAGAGCGTTTACCGGTT+GGG 0.397135 2_4:+39355677 None:intergenic
TCCCTCTGGCAAGTGTATCT+TGG 0.398610 2_4:+39348731 None:intergenic
ATGAGTTTACTTGAAGTTTG+TGG 0.399247 2_4:-39347108 Msa0327570:three_prime_UTR
TGTCAAAAGAAGCCACAATA+TGG 0.404498 2_4:+39353344 None:intergenic
GCATTTGCAGCTGCTCTGAA+TGG 0.405218 2_4:-39350121 Msa0327570:CDS
TTGATATGGGACCGGGCTCT+TGG 0.411393 2_4:-39347549 Msa0327570:CDS
GAGATGTCATACAGTGTTAG+TGG 0.411690 2_4:+39355225 None:intergenic
ATATGTTGGTATTTAGGAAA+AGG 0.414102 2_4:-39347296 Msa0327570:three_prime_UTR
ACTGCATGGTTTAGCCAATC+AGG 0.415933 2_4:-39350086 Msa0327570:intron
AGCTGGAAAAGTGGATCATT+AGG 0.420903 2_4:+39348689 None:intergenic
TGACATTACCTTGCCTAACT+TGG 0.421588 2_4:+39348527 None:intergenic
TGCAGACAAACCTGATACTC+TGG 0.421644 2_4:+39354517 None:intergenic
GGCTGTATGTTTCTATCCAC+AGG 0.423756 2_4:-39350573 Msa0327570:intron
TACTGGTGTAATGGCCCTCC+AGG 0.424587 2_4:-39352419 Msa0327570:intron
TATGTTGGTATTTAGGAAAA+GGG 0.428786 2_4:-39347295 Msa0327570:three_prime_UTR
GTCATTGGATGAGCAGAAAC+AGG 0.436951 2_4:+39352451 None:intergenic
CGGAAATGCTTGAGTTTATG+AGG 0.437582 2_4:-39350594 Msa0327570:CDS
TTGGATTTGCAGGTTGTGCC+TGG 0.452455 2_4:-39348785 Msa0327570:intron
CCTCCACTAATGACTGAATC+AGG 0.455300 2_4:-39355814 None:intergenic
CACAATATGGCCTCAGGCAA+AGG 0.458721 2_4:+39353357 None:intergenic
GAGCATGGAAGTGTTGAATT+GGG 0.461632 2_4:-39353818 Msa0327570:CDS
ATTTGCAGAGTATGCTTACA+AGG 0.466451 2_4:-39352488 Msa0327570:intron
AAATAACAAAATAACCTGAT+TGG 0.471116 2_4:+39350072 None:intergenic
GATACACTCTGGTGATATGT+AGG 0.472026 2_4:-39347424 Msa0327570:three_prime_UTR
GCTTCAATGCAAACTCCCTC+TGG 0.472659 2_4:+39348717 None:intergenic
GCAAGTGGATTCATTAGCTC+AGG 0.473278 2_4:-39353091 Msa0327570:CDS
ACAATTCACTACTGGTGTAA+TGG 0.476175 2_4:-39352428 Msa0327570:CDS
TAAATGTAAGCAGCAATTCC+AGG 0.476938 2_4:+39350839 None:intergenic
CCACTGTGAGCATCAACATT+AGG 0.478544 2_4:+39347843 None:intergenic
CATGTTAGGATTTGATGATC+CGG 0.483789 2_4:-39350614 Msa0327570:CDS
CGAAGTCGTGCGAAAATCCC+AGG 0.483821 2_4:-39353063 Msa0327570:intron
TCTGATTAAAAGGTACTTGG+TGG 0.484331 2_4:-39353661 Msa0327570:intron
TTTGGTGTCGCAAGGAGTAT+TGG 0.484554 2_4:-39347670 Msa0327570:CDS
ATGGATCAGAAATATAGTTA+AGG 0.495096 2_4:-39349686 Msa0327570:CDS
TAAAACTCTGAACAGTGGCC+AGG 0.495286 2_4:-39349614 Msa0327570:intron
GAGTATTGGAGTTGGCCCTC+AGG 0.499686 2_4:-39347656 Msa0327570:intron
CCAGTAGTGAATTGTGTCAT+TGG 0.501524 2_4:+39352436 None:intergenic
TGGTGGGGAGCCTTTGCCTG+AGG 0.502216 2_4:-39353367 Msa0327570:CDS
GGCTAAACCATGCAGTGGGC+CGG 0.503287 2_4:+39350093 None:intergenic
AAGGTACTTGGTGGAATGAG+AGG 0.504202 2_4:-39353652 Msa0327570:CDS
GGTTTAGCCGGCCCACTGCA+TGG 0.504218 2_4:-39350100 Msa0327570:CDS
TTCAAGCTATCCTCATAAGT+TGG 0.509007 2_4:+39350878 None:intergenic
TGGAAAGCGCAGAAACGCTT+CGG 0.509891 2_4:+39355432 None:intergenic
TTGCCTAACTTGGTCAGAAT+AGG 0.514733 2_4:+39348537 None:intergenic
TTGAAATATTTACCTCATCT+GGG 0.515259 2_4:+39353593 None:intergenic
TCAGGCAAAGGCTCCCCACC+AGG 0.518613 2_4:+39353369 None:intergenic
GGAGTACTACTGAACTACTA+TGG 0.523818 2_4:-39347822 Msa0327570:CDS
AGAAGCCACAATATGGCCTC+AGG 0.528313 2_4:+39353351 None:intergenic
GTATTGGGAGCCAACTTATG+AGG 0.532378 2_4:-39350888 Msa0327570:CDS
CCAATGACACAATTCACTAC+TGG 0.535441 2_4:-39352436 Msa0327570:CDS
CGAATTTACAAAGGCATACG+AGG 0.536029 2_4:-39351000 Msa0327570:CDS
CCGTTCTCTTTGGTGTCGCA+AGG 0.537309 2_4:-39347678 Msa0327570:CDS
CTCTTGGAATGCCACTTGAA+AGG 0.537697 2_4:-39347533 Msa0327570:CDS
GATACCAAATAAAGAGCAAG+TGG 0.542297 2_4:-39353106 Msa0327570:CDS
CTTTGCCTGAGGCCATATTG+TGG 0.543494 2_4:-39353356 Msa0327570:CDS
AAAACTCCATGTCCATATCC+AGG 0.545465 2_4:+39348767 None:intergenic
CAAGTGGCATTCCAAGAGCC+CGG 0.548890 2_4:+39347538 None:intergenic
GTTGGTATTTAGGAAAAGGG+TGG 0.549900 2_4:-39347292 Msa0327570:three_prime_UTR
GCAGCTGCAAATGCAAGATA+AGG 0.554314 2_4:+39350130 None:intergenic
CCTAACTTGGTCAGAATAGG+AGG 0.560534 2_4:+39348540 None:intergenic
GCTGCTCTGAATGGTTTAGC+CGG 0.568292 2_4:-39350112 Msa0327570:CDS
ATACACTCTGGTGATATGTA+GGG 0.571478 2_4:-39347423 Msa0327570:three_prime_UTR
CTAACTGAATTAGCGAGACT+AGG 0.577132 2_4:+39355268 None:intergenic
TTGCTGCTTACATTTATCGA+CGG 0.581460 2_4:-39350832 Msa0327570:intron
TACGACGCGAGATCGAAGCT+TGG 0.582971 2_4:+39355412 None:intergenic
TTTCAGGGAATTCGCTTTAG+GGG 0.586113 2_4:-39353435 Msa0327570:intron
ACAGCATAAATTAGGTCCCA+AGG 0.590628 2_4:-39347232 Msa0327570:three_prime_UTR
AAGAAGCTGAAGAAAGAGCA+TGG 0.593745 2_4:-39353833 Msa0327570:CDS
TTACAAAGGCATACGAGGGT+GGG 0.601148 2_4:-39350995 Msa0327570:CDS
TTTACAAAGGCATACGAGGG+TGG 0.602923 2_4:-39350996 Msa0327570:CDS
GTCGCAAGGAGTATTGGAGT+TGG 0.606634 2_4:-39347664 Msa0327570:CDS
TGAGCATCAACATTAGGCCA+TGG 0.610028 2_4:+39347849 None:intergenic
GAGAAACTTGAGAAATTGGT+CGG 0.612925 2_4:-39347492 Msa0327570:CDS
CTATTTAGAAAGAATACAGA+GGG 0.615356 2_4:+39347172 None:intergenic
TGTTCTGATTGAGAATATGT+TGG 0.615458 2_4:-39347310 Msa0327570:three_prime_UTR
TCCCCACCAGGAAAAGCACC+TGG 0.616236 2_4:+39353381 None:intergenic
TCCAAGATACACTTGCCAGA+GGG 0.616781 2_4:-39348732 Msa0327570:CDS
TAATCCAAAGAATCATCCAA+TGG 0.620771 2_4:+39350655 None:intergenic
TATTCTGACCAAGTTAGGCA+AGG 0.623130 2_4:-39348535 Msa0327570:intron
CAGCATAAATTAGGTCCCAA+GGG 0.626145 2_4:-39347231 Msa0327570:three_prime_UTR
ATGACAGCTTTAGTGTGGCT+AGG 0.626895 2_4:-39353628 Msa0327570:CDS
GGTGGAGAGCGAATTTACAA+AGG 0.630867 2_4:-39351009 Msa0327570:CDS
CTCAGCTGTTGACCCAGATG+AGG 0.633642 2_4:-39353605 Msa0327570:intron
CCTTGCGACACCAAAGAGAA+CGG 0.640152 2_4:+39347678 None:intergenic
TGATTGGCTAAACCATGCAG+TGG 0.651254 2_4:+39350088 None:intergenic
AGGGTGGGATACATAAGTCA+AGG 0.654340 2_4:-39350980 Msa0327570:intron
GATTGGCTAAACCATGCAGT+GGG 0.661247 2_4:+39350089 None:intergenic
ATATTCTCAATCAGAACATG+CGG 0.669211 2_4:+39347315 None:intergenic
GTTGTGCCTGGATATGGACA+TGG 0.672928 2_4:-39348773 Msa0327570:CDS
GAGGAATGACAGCTTTAGTG+TGG 0.675279 2_4:-39353633 Msa0327570:CDS
ATGTGCAGTGATCATGAAGG+CGG 0.675536 2_4:-39350423 Msa0327570:intron
ATCCAAGATACACTTGCCAG+AGG 0.678943 2_4:-39348733 Msa0327570:CDS
ATGTCATACAGTGTTAGTGG+AGG 0.680095 2_4:+39355228 None:intergenic
AATCTGTTACTCAACCTGGA+GGG 0.680688 2_4:+39352405 None:intergenic
ATTCATAAAACTCTGAACAG+TGG 0.683094 2_4:-39349619 Msa0327570:CDS
CCTATTTAGAAAGAATACAG+AGG 0.686044 2_4:+39347171 None:intergenic
TGTTACAGGAAGTTCTACGA+TGG 0.687651 2_4:-39349705 Msa0327570:intron
TTGATTGCTAAGATACACTC+TGG 0.692641 2_4:-39347435 Msa0327570:three_prime_UTR
TTCATGTGCAGTGATCATGA+AGG 0.695871 2_4:-39350426 Msa0327570:intron
GAACTACTATGGTCTAACTG+AGG 0.714548 2_4:-39347811 Msa0327570:CDS
GAATTTACAAAGGCATACGA+GGG 0.725539 2_4:-39350999 Msa0327570:CDS
CCTAATGTTGATGCTCACAG+TGG 0.737956 2_4:-39347843 Msa0327570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATATTATAAAATAT+AGG - chr2_4:39350982-39351001 Msa0327570:CDS 0.0%
!! AAAAATAATAAGAATGATAA+GGG + chr2_4:39347370-39347389 None:intergenic 10.0%
!! AAAAAATAATAAGAATGATA+AGG + chr2_4:39347371-39347390 None:intergenic 10.0%
!! AAACAATAAAAAAAAAGAAA+AGG + chr2_4:39347545-39347564 None:intergenic 10.0%
!! ATTTATTTATATATAGATGT+TGG - chr2_4:39349600-39349619 Msa0327570:intron 10.0%
!! ATAATAAGTTTAATAATCAT+AGG - chr2_4:39349974-39349993 Msa0327570:intron 10.0%
!! AATATTATAAAATATAGGAT+TGG - chr2_4:39350987-39351006 Msa0327570:CDS 10.0%
!!! ATTATTTAATATTTTTTGTG+GGG + chr2_4:39351586-39351605 None:intergenic 10.0%
!!! ATATCACAATTTTTTTTTTT+TGG + chr2_4:39351798-39351817 None:intergenic 10.0%
!! AATTATATAATTATGAGTAT+TGG - chr2_4:39353069-39353088 Msa0327570:CDS 10.0%
!!! AAAATTTTATCATAACAAAT+TGG + chr2_4:39353547-39353566 None:intergenic 10.0%
!!! TTTAATAAAAGGATTTTTTT+TGG - chr2_4:39353568-39353587 Msa0327570:intron 10.0%
!!! TAATTTTCTCAAATTACTAT+CGG + chr2_4:39347998-39348017 None:intergenic 15.0%
!! AAAAGAAAAATTTATGCAAA+AGG + chr2_4:39350551-39350570 None:intergenic 15.0%
!! GTATAAAGATAAATATACAT+AGG + chr2_4:39351284-39351303 None:intergenic 15.0%
!! TAATTAATAATGTACATGTT+AGG + chr2_4:39351431-39351450 None:intergenic 15.0%
!! CAATAAAAAAAATTCATTTC+AGG - chr2_4:39351870-39351889 Msa0327570:intron 15.0%
!! ATTAAACATTTAATATGCAT+TGG - chr2_4:39352118-39352137 Msa0327570:intron 15.0%
!! TTAAACATTTAATATGCATT+GGG - chr2_4:39352119-39352138 Msa0327570:intron 15.0%
!!! GATTTCTTATCATATTTTAA+AGG - chr2_4:39352198-39352217 Msa0327570:intron 15.0%
!! ATTACAATAATAATAACAAC+CGG + chr2_4:39352701-39352720 None:intergenic 15.0%
!! AATCATATTATATATCTCAT+TGG + chr2_4:39353110-39353129 None:intergenic 15.0%
!! AAAGTAATAATATACAGATA+AGG + chr2_4:39353148-39353167 None:intergenic 15.0%
!! TAAATATTGTTGATATGTTA+TGG - chr2_4:39353401-39353420 Msa0327570:CDS 15.0%
!! TATTTAATGTTGTGAAATAA+CGG - chr2_4:39353956-39353975 Msa0327570:intron 15.0%
!!! TACAAAATGATTGTTTTAAA+AGG - chr2_4:39354010-39354029 Msa0327570:intron 15.0%
!! AGGAATATATAAAAAAAATG+TGG + chr2_4:39354953-39354972 None:intergenic 15.0%
!! AAAAAATTGGAAAATTGAAC+TGG + chr2_4:39347174-39347193 None:intergenic 20.0%
!!! GTTCAATTTTCCAATTTTTT+TGG - chr2_4:39347174-39347193 Msa0327570:three_prime_UTR 20.0%
!! AAGGAAATATATTGAAAGAA+TGG + chr2_4:39347526-39347545 None:intergenic 20.0%
!!! TTTATGATGATGATTTTTGA+TGG - chr2_4:39347597-39347616 Msa0327570:intron 20.0%
!!! TCATTTTCTCAAATTACTAT+CGG + chr2_4:39347878-39347897 None:intergenic 20.0%
!!! AATTTTCTCAAATTACTATC+GGG + chr2_4:39347997-39348016 None:intergenic 20.0%
!! TTATAAAATTCCAAACTACA+CGG + chr2_4:39348203-39348222 None:intergenic 20.0%
!!! TAATGTAGTTTAGATTTTGT+TGG - chr2_4:39348220-39348239 Msa0327570:intron 20.0%
!!! TGAAAATAATTTGTGAACAA+TGG - chr2_4:39348755-39348774 Msa0327570:CDS 20.0%
!!! TTTTAATTATCTGGTTGTAA+TGG - chr2_4:39348873-39348892 Msa0327570:intron 20.0%
!! TTTAATTATCTGGTTGTAAT+GGG - chr2_4:39348874-39348893 Msa0327570:intron 20.0%
!!! TCTATGATATGTTTTAATCT+TGG - chr2_4:39349017-39349036 Msa0327570:intron 20.0%
!! TTGTTGTGTAGTAAATTTAT+AGG - chr2_4:39350132-39350151 Msa0327570:CDS 20.0%
!! TTTAGTCTGTTATAAGTTAT+TGG - chr2_4:39351522-39351541 Msa0327570:intron 20.0%
!! TAAAAAAAATTCATTTCAGG+TGG - chr2_4:39351873-39351892 Msa0327570:intron 20.0%
!!! CATATTTTAAAGGATATACA+AGG - chr2_4:39352208-39352227 Msa0327570:intron 20.0%
!!! CTGTTTGATTTTTTATGTTT+TGG - chr2_4:39352445-39352464 Msa0327570:CDS 20.0%
!! AAATAACAAAATAACCTGAT+TGG + chr2_4:39352831-39352850 None:intergenic 20.0%
!! CATATACTTAAAATTTCTCA+AGG + chr2_4:39353380-39353399 None:intergenic 20.0%
!!! AAAATCGAAATCCTTTTTAA+TGG + chr2_4:39353809-39353828 None:intergenic 20.0%
!! ATTTAATGTTGTGAAATAAC+GGG - chr2_4:39353957-39353976 Msa0327570:intron 20.0%
!!! GGTTTTTCTTTTTCTATTTT+TGG - chr2_4:39354096-39354115 Msa0327570:intron 20.0%
!!! ATTTTAGATTTTGTTTGCTT+TGG - chr2_4:39354247-39354266 Msa0327570:intron 20.0%
!!! TATGAACTTTTATTTCTTTG+TGG - chr2_4:39354615-39354634 Msa0327570:intron 20.0%
!!! ATTTTGTTGGAAAAGAAATA+AGG - chr2_4:39354704-39354723 Msa0327570:intron 20.0%
!! CATAAAAAAAGGTAAGAAAA+AGG + chr2_4:39354782-39354801 None:intergenic 20.0%
!!! CTTTTTCTTACCTTTTTTTA+TGG - chr2_4:39354780-39354799 Msa0327570:intron 20.0%
!! AAAAACTATGCCATAAAAAA+AGG + chr2_4:39354793-39354812 None:intergenic 20.0%
!!! TTTTATAGGTTAAAAATCCA+TGG - chr2_4:39355034-39355053 Msa0327570:intron 20.0%
!!! TCAATTTGCTATTACTTTTT+AGG - chr2_4:39355158-39355177 Msa0327570:intron 20.0%
!!! CAATTTGCTATTACTTTTTA+GGG - chr2_4:39355159-39355178 Msa0327570:intron 20.0%
!! ATCAACTAAAATACAATGAA+AGG + chr2_4:39355336-39355355 None:intergenic 20.0%
!!! TCATTGTATTTTAGTTGATA+TGG - chr2_4:39355337-39355356 Msa0327570:intron 20.0%
!!! CATTGTATTTTAGTTGATAT+GGG - chr2_4:39355338-39355357 Msa0327570:intron 20.0%
!!! TGTTGTTAACTTGAAAATTT+TGG - chr2_4:39355500-39355519 Msa0327570:intron 20.0%
!! CAAAATAACCAGAAAAATAA+GGG + chr2_4:39355564-39355583 None:intergenic 20.0%
!! ACAAAATAACCAGAAAAATA+AGG + chr2_4:39355565-39355584 None:intergenic 20.0%
!!! AATAAAGGCATTATTGTTTT+GGG - chr2_4:39355700-39355719 Msa0327570:five_prime_UTR 20.0%
! TGATTACGATCCAAAAAAAT+TGG + chr2_4:39347187-39347206 None:intergenic 25.0%
! GATAAGGGATTGAAAAAAAT+AGG + chr2_4:39347355-39347374 None:intergenic 25.0%
!!! GTTCTATTGATTCATCTAAA+TGG - chr2_4:39347438-39347457 Msa0327570:three_prime_UTR 25.0%
!! CATTTTCTCAAATTACTATC+GGG + chr2_4:39347877-39347896 None:intergenic 25.0%
! ATACAAATTCAAGACAAACA+GGG + chr2_4:39348281-39348300 None:intergenic 25.0%
! AATACAAATTCAAGACAAAC+AGG + chr2_4:39348282-39348301 None:intergenic 25.0%
!!! TTGTCTGCATTTTTAAGTTT+TGG - chr2_4:39348397-39348416 Msa0327570:intron 25.0%
!!! CTTGCAATGTAACTTATTTT+TGG - chr2_4:39349206-39349225 Msa0327570:intron 25.0%
!! AACTGCATTTTCTGATTAAA+AGG - chr2_4:39349229-39349248 Msa0327570:intron 25.0%
!!! TTTTCTGATTAAAAGGTACT+TGG - chr2_4:39349236-39349255 Msa0327570:intron 25.0%
! TTGAAATATTTACCTCATCT+GGG + chr2_4:39349310-39349329 None:intergenic 25.0%
! ATTGAAATATTTACCTCATC+TGG + chr2_4:39349311-39349330 None:intergenic 25.0%
!! GTAAATATTTCAATTGACTC+AGG - chr2_4:39349317-39349336 Msa0327570:intron 25.0%
!!! AATAGCATGTTTTGTTTTTC+AGG - chr2_4:39349449-39349468 Msa0327570:intron 25.0%
!!! ATAGCATGTTTTGTTTTTCA+GGG - chr2_4:39349450-39349469 Msa0327570:intron 25.0%
! TTACAAAAGGAAATTAACCT+GGG + chr2_4:39349857-39349876 None:intergenic 25.0%
! ATTACAAAAGGAAATTAACC+TGG + chr2_4:39349858-39349877 None:intergenic 25.0%
!! TTCCTTTTGTAATCATATCT+TGG - chr2_4:39349865-39349884 Msa0327570:intron 25.0%
! TACCAAGATATGATTACAAA+AGG + chr2_4:39349870-39349889 None:intergenic 25.0%
! AAAAGAACTATACATAACCA+TGG + chr2_4:39349947-39349966 None:intergenic 25.0%
! CTCTGCAAATAAAGAAAATA+AGG + chr2_4:39350402-39350421 None:intergenic 25.0%
!!! TATTGAACCACTGATTTTTA+AGG - chr2_4:39350521-39350540 Msa0327570:intron 25.0%
!! ACTATACTTTCTGAAGAAAA+AGG + chr2_4:39350635-39350654 None:intergenic 25.0%
! AAAATTAATCAAAGGGTGAT+AGG - chr2_4:39350736-39350755 Msa0327570:intron 25.0%
!!! CAAATTTTAGCTCAGAAAAT+TGG - chr2_4:39350767-39350786 Msa0327570:intron 25.0%
! GACTAAGAAAATACTTCAAT+AGG - chr2_4:39350801-39350820 Msa0327570:intron 25.0%
!! TATCGATAATCGTAGTATTT+TGG - chr2_4:39351026-39351045 Msa0327570:intron 25.0%
!! ATCGATAATCGTAGTATTTT+GGG - chr2_4:39351027-39351046 Msa0327570:intron 25.0%
! GTTAATTCTCTTTCTTCATT+GGG + chr2_4:39351185-39351204 None:intergenic 25.0%
! AATGAAGAAAGAGAATTAAC+CGG - chr2_4:39351185-39351204 Msa0327570:intron 25.0%
! TTAACGTGTTGCAAAAATTA+AGG + chr2_4:39351375-39351394 None:intergenic 25.0%
! AATATCACTAAGCAAAAACT+TGG + chr2_4:39351699-39351718 None:intergenic 25.0%
! AATCCATCCAAAATGTTAAA+AGG + chr2_4:39352182-39352201 None:intergenic 25.0%
!!! TTTTAAAGGATATACAAGGA+TGG - chr2_4:39352212-39352231 Msa0327570:intron 25.0%
! AAATCAAACAGCAAATACAA+CGG + chr2_4:39352436-39352455 None:intergenic 25.0%
! CTTGTTCTTAGTTTATTCAT+TGG - chr2_4:39352637-39352656 Msa0327570:intron 25.0%
! AAAAACAGAAAACATGGTTA+GGG + chr2_4:39352860-39352879 None:intergenic 25.0%
! TATCAGAAAAACAGAAAACA+TGG + chr2_4:39352866-39352885 None:intergenic 25.0%
!!! GCTTCATTTTCAAGTAAAAA+TGG + chr2_4:39352958-39352977 None:intergenic 25.0%
!! CAAAACTTTTCAGCAATAAA+AGG + chr2_4:39353049-39353068 None:intergenic 25.0%
! ATACAGATAAGGAACAATTT+GGG + chr2_4:39353137-39353156 None:intergenic 25.0%
! TATACAGATAAGGAACAATT+TGG + chr2_4:39353138-39353157 None:intergenic 25.0%
! ATGGATCAGAAATATAGTTA+AGG - chr2_4:39353214-39353233 Msa0327570:intron 25.0%
! AGAAATATAGTTAAGGAGTT+TGG - chr2_4:39353221-39353240 Msa0327570:intron 25.0%
! AATTGTTCTGTACTTATGTT+TGG + chr2_4:39353251-39353270 None:intergenic 25.0%
!!! TTTTCTATTTTTGGATTTGC+AGG - chr2_4:39354105-39354124 Msa0327570:intron 25.0%
!!! TTTAATTTTTGACACCTGAA+AGG + chr2_4:39354331-39354350 None:intergenic 25.0%
!!! GAAAGGTATTCATAAAATAC+AGG + chr2_4:39354492-39354511 None:intergenic 25.0%
! AAACCTTTATAATCCATCTA+TGG + chr2_4:39354524-39354543 None:intergenic 25.0%
! TTTCTTTGTGGAATTTCTAA+TGG - chr2_4:39354627-39354646 Msa0327570:intron 25.0%
! TTCTTTGTGGAATTTCTAAT+GGG - chr2_4:39354628-39354647 Msa0327570:intron 25.0%
! CTAAAATACAATGAAAGGAA+GGG + chr2_4:39355331-39355350 None:intergenic 25.0%
! ACTAAAATACAATGAAAGGA+AGG + chr2_4:39355332-39355351 None:intergenic 25.0%
!! ATAAATGGTGCTTTAATTTC+AGG + chr2_4:39355442-39355461 None:intergenic 25.0%
! TTGAGAATATGTTGGTATTT+AGG - chr2_4:39355598-39355617 Msa0327570:intron 25.0%
! ATATGTTGGTATTTAGGAAA+AGG - chr2_4:39355604-39355623 Msa0327570:intron 25.0%
! TATGTTGGTATTTAGGAAAA+GGG - chr2_4:39355605-39355624 Msa0327570:intron 25.0%
!!! GAATAAAGGCATTATTGTTT+TGG - chr2_4:39355699-39355718 Msa0327570:five_prime_UTR 25.0%
!!! ATAAAGGCATTATTGTTTTG+GGG - chr2_4:39355701-39355720 Msa0327570:five_prime_UTR 25.0%
! CTATTTAGAAAGAATACAGA+GGG + chr2_4:39355731-39355750 None:intergenic 25.0%
ATAGAGAATCAAAACGATGA+AGG + chr2_4:39347293-39347312 None:intergenic 30.0%
!! CTCTCATCATTCTAAAATTG+TGG - chr2_4:39347705-39347724 Msa0327570:intron 30.0%
!!! GTTTTTTTAAGCACAAACAC+CGG - chr2_4:39347746-39347765 Msa0327570:intron 30.0%
CTTAATAGACATTGACACAT+GGG + chr2_4:39347832-39347851 None:intergenic 30.0%
! ATTATGAATTTTGCTGACAG+AGG - chr2_4:39348308-39348327 Msa0327570:intron 30.0%
! TTATGAATTTTGCTGACAGA+GGG - chr2_4:39348309-39348328 Msa0327570:intron 30.0%
!!! GCATTTTTAAGTTTTGGCAT+TGG - chr2_4:39348403-39348422 Msa0327570:intron 30.0%
!! TAATATATGCTGCTTTGTTG+TGG - chr2_4:39348454-39348473 Msa0327570:intron 30.0%
TACTCCTGATACATAAATGT+GGG - chr2_4:39348531-39348550 Msa0327570:intron 30.0%
ATAAGCTGTTTATCCAAACA+GGG + chr2_4:39348590-39348609 None:intergenic 30.0%
AATAAGCTGTTTATCCAAAC+AGG + chr2_4:39348591-39348610 None:intergenic 30.0%
! TAGATTTTGTGAGACAGTTT+GGG + chr2_4:39348804-39348823 None:intergenic 30.0%
! ATAGATTTTGTGAGACAGTT+TGG + chr2_4:39348805-39348824 None:intergenic 30.0%
!!! CTTGGAGTGTTTTAATTATC+TGG - chr2_4:39348864-39348883 Msa0327570:intron 30.0%
AACTACAACTAAATGCACAT+TGG + chr2_4:39348945-39348964 None:intergenic 30.0%
TTTAATCTTGGCATAAAACC+TGG - chr2_4:39349029-39349048 Msa0327570:intron 30.0%
TAAGTTACATTGCAAGCTTA+TGG + chr2_4:39349202-39349221 None:intergenic 30.0%
TGTAATCATATCTTGGTATC+TGG - chr2_4:39349872-39349891 Msa0327570:intron 30.0%
TGGGTATATGATATGAACTA+GGG - chr2_4:39350075-39350094 Msa0327570:intron 30.0%
! TAGTAAATTTATAGGCATCG+CGG - chr2_4:39350140-39350159 Msa0327570:CDS 30.0%
! TTGTTCTTTTGATGTGTATG+TGG - chr2_4:39350181-39350200 Msa0327570:intron 30.0%
TACATTGTTTATGATGCACA+TGG - chr2_4:39350360-39350379 Msa0327570:intron 30.0%
!!! ATTTTAGCTCAGAAAATTGG+AGG - chr2_4:39350770-39350789 Msa0327570:intron 30.0%
ATTAATTGAACTCTTGCATG+AGG + chr2_4:39350965-39350984 None:intergenic 30.0%
GGTTAATTCTCTTTCTTCAT+TGG + chr2_4:39351186-39351205 None:intergenic 30.0%
ATGAAGAAAGAGAATTAACC+GGG - chr2_4:39351186-39351205 Msa0327570:intron 30.0%
ATATACATAGGAAAGAGAAC+AGG + chr2_4:39351272-39351291 None:intergenic 30.0%
AAACTTACTTTAGATGGACA+TGG + chr2_4:39351316-39351335 None:intergenic 30.0%
AGGAAGAAACTTACTTTAGA+TGG + chr2_4:39351322-39351341 None:intergenic 30.0%
!!! AGTTTCTTCCTTTTTTGAAG+AGG - chr2_4:39351331-39351350 Msa0327570:intron 30.0%
!!! GTTTCTTCCTTTTTTGAAGA+GGG - chr2_4:39351332-39351351 Msa0327570:intron 30.0%
ATCTAAGTGTGTATAACTGT+GGG - chr2_4:39351479-39351498 Msa0327570:intron 30.0%
ATCCAGAAGTTTCAATTAGT+GGG + chr2_4:39351825-39351844 None:intergenic 30.0%
! CTCTCATCCTTTTAACATTT+TGG - chr2_4:39352172-39352191 Msa0327570:intron 30.0%
! CATCCTTTTAACATTTTGGA+TGG - chr2_4:39352176-39352195 Msa0327570:intron 30.0%
TAATCCAAAGAATCATCCAA+TGG + chr2_4:39352248-39352267 None:intergenic 30.0%
TTGGATGATTCTTTGGATTA+TGG - chr2_4:39352248-39352267 Msa0327570:intron 30.0%
ATAATAACAACCGGAATCAA+AGG + chr2_4:39352692-39352711 None:intergenic 30.0%
TATTCTATTGTGTTCACTTC+AGG - chr2_4:39352727-39352746 Msa0327570:intron 30.0%
GAAAAACAGAAAACATGGTT+AGG + chr2_4:39352861-39352880 None:intergenic 30.0%
TCCATTTCATAAACCATGTT+TGG - chr2_4:39352908-39352927 Msa0327570:intron 30.0%
TCCAAACATGGTTTATGAAA+TGG + chr2_4:39352912-39352931 None:intergenic 30.0%
GTAAAAATGGCAAATATGAC+AGG + chr2_4:39352945-39352964 None:intergenic 30.0%
ATTCATAAAACTCTGAACAG+TGG - chr2_4:39353281-39353300 Msa0327570:intron 30.0%
TTCATATCAGTTACATTACC+TGG + chr2_4:39353307-39353326 None:intergenic 30.0%
AACAAAAGCTAAATAGGAAG+AGG + chr2_4:39353356-39353375 None:intergenic 30.0%
CAAGGAAACAAAAGCTAAAT+AGG + chr2_4:39353362-39353381 None:intergenic 30.0%
!!! AAAGGATTTTTTTTGGCTGA+AGG - chr2_4:39353575-39353594 Msa0327570:intron 30.0%
!!! AAGGATTTTTTTTGGCTGAA+GGG - chr2_4:39353576-39353595 Msa0327570:intron 30.0%
!!! CTCCTTGTTTTACATGTATA+TGG - chr2_4:39353616-39353635 Msa0327570:CDS 30.0%
GTCCATATACATGTAAAACA+AGG + chr2_4:39353621-39353640 None:intergenic 30.0%
TCTAATTATTGGATTGTCCT+CGG + chr2_4:39353752-39353771 None:intergenic 30.0%
TACAAGCCAAACCATTAAAA+AGG - chr2_4:39353795-39353814 Msa0327570:intron 30.0%
! CGAAATCCTTTTTAATGGTT+TGG + chr2_4:39353804-39353823 None:intergenic 30.0%
AAATTGAGAAAAATACCAGC+TGG + chr2_4:39354231-39354250 None:intergenic 30.0%
TCAGGTGTCAAAAATTAAAG+AGG - chr2_4:39354332-39354351 Msa0327570:intron 30.0%
! TTTAGTTCCCAATCTTGAAA+TGG - chr2_4:39354435-39354454 Msa0327570:intron 30.0%
GCAAAAACCATTTCAAGATT+GGG + chr2_4:39354445-39354464 None:intergenic 30.0%
AGCAAAAACCATTTCAAGAT+TGG + chr2_4:39354446-39354465 None:intergenic 30.0%
ATTCATAAAATACAGGCATG+TGG + chr2_4:39354485-39354504 None:intergenic 30.0%
!! AGACCATAGATGGATTATAA+AGG - chr2_4:39354518-39354537 Msa0327570:intron 30.0%
TGGATTATAAAGGTTTAGCT+CGG - chr2_4:39354528-39354547 Msa0327570:CDS 30.0%
ACAAGAAAGATGATCTGATA+GGG - chr2_4:39354578-39354597 Msa0327570:intron 30.0%
!!! ATGGCATAGTTTTTGTTTTG+AGG - chr2_4:39354799-39354818 Msa0327570:intron 30.0%
!!! CATAGTTTTTGTTTTGAGGA+TGG - chr2_4:39354803-39354822 Msa0327570:intron 30.0%
! ATTCCTGCATCAAATTTTGA+TGG - chr2_4:39354967-39354986 Msa0327570:intron 30.0%
TATTCAGTACATCTGGTATA+AGG + chr2_4:39354994-39355013 None:intergenic 30.0%
!!! TGCTCACTTGCTATTTTTAT+AGG - chr2_4:39355020-39355039 Msa0327570:intron 30.0%
!!! TATTTTAGTTGATATGGGAC+CGG - chr2_4:39355343-39355362 Msa0327570:intron 30.0%
CTTAGCAATCAACAGATAAA+TGG + chr2_4:39355457-39355476 None:intergenic 30.0%
ATAACCAGAAAAATAAGGGA+GGG + chr2_4:39355560-39355579 None:intergenic 30.0%
AATAACCAGAAAAATAAGGG+AGG + chr2_4:39355561-39355580 None:intergenic 30.0%
ATATTCTCAATCAGAACATG+CGG + chr2_4:39355588-39355607 None:intergenic 30.0%
TGTTCTGATTGAGAATATGT+TGG - chr2_4:39355590-39355609 Msa0327570:intron 30.0%
! TTTTCTGCACAGCATAAATT+AGG - chr2_4:39355660-39355679 Msa0327570:intron 30.0%
CCTATTTAGAAAGAATACAG+AGG + chr2_4:39355732-39355751 None:intergenic 30.0%
CCTCTGTATTCTTTCTAAAT+AGG - chr2_4:39355729-39355748 Msa0327570:five_prime_UTR 30.0%
! ACTCGTATTTTTCGTCAAAA+GGG + chr2_4:39355761-39355780 None:intergenic 30.0%
! AACTCGTATTTTTCGTCAAA+AGG + chr2_4:39355762-39355781 None:intergenic 30.0%
ATGAGTTTACTTGAAGTTTG+TGG - chr2_4:39355792-39355811 Msa0327570:five_prime_UTR 30.0%
GATGAAAGATCGATCAATGA+TGG + chr2_4:39347324-39347343 None:intergenic 35.0%
!! TGATGATGATTTTTGATGGC+AGG - chr2_4:39347601-39347620 Msa0327570:intron 35.0%
!! GATGATGATTTTTGATGGCA+GGG - chr2_4:39347602-39347621 Msa0327570:intron 35.0%
GCTTAATAGACATTGACACA+TGG + chr2_4:39347833-39347852 None:intergenic 35.0%
TTGAACGTAATCACATGTGT+TGG - chr2_4:39348023-39348042 Msa0327570:intron 35.0%
! TGACTGATGAAAGGTGTATT+CGG + chr2_4:39348075-39348094 None:intergenic 35.0%
ACTGTTATTACCGTGTAGTT+TGG - chr2_4:39348190-39348209 Msa0327570:intron 35.0%
! TATGAATTTTGCTGACAGAG+GGG - chr2_4:39348310-39348329 Msa0327570:intron 35.0%
! GGTTATTTGTTCTGTTTTGC+AGG - chr2_4:39348331-39348350 Msa0327570:intron 35.0%
! GGATCTTTTTACTGAGATGA+AGG - chr2_4:39348352-39348371 Msa0327570:intron 35.0%
!!! GGCATTGGTACTTTTTTTGT+TGG - chr2_4:39348418-39348437 Msa0327570:intron 35.0%
GTACTCCTGATACATAAATG+TGG - chr2_4:39348530-39348549 Msa0327570:intron 35.0%
!! GGGCTTCATAGTTTTACTAT+TGG - chr2_4:39348551-39348570 Msa0327570:CDS 35.0%
!!! ACATAGTTTTAGACCCTGTT+TGG - chr2_4:39348574-39348593 Msa0327570:intron 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG - chr2_4:39348713-39348732 Msa0327570:CDS 35.0%
TCAAAAAAGCCAATCCAATC+AGG - chr2_4:39348839-39348858 Msa0327570:intron 35.0%
CAAAAAAGCCAATCCAATCA+GGG - chr2_4:39348840-39348859 Msa0327570:intron 35.0%
! AATTATCTGGTTGTAATGGG+TGG - chr2_4:39348877-39348896 Msa0327570:intron 35.0%
TAAATGAAGTCCCACTTTCT+TGG - chr2_4:39349176-39349195 Msa0327570:intron 35.0%
!! TCTGATTAAAAGGTACTTGG+TGG - chr2_4:39349239-39349258 Msa0327570:intron 35.0%
!!! TTTTTCAGGGAATTCGCTTT+AGG - chr2_4:39349463-39349482 Msa0327570:intron 35.0%
!! TTTTCAGGGAATTCGCTTTA+GGG - chr2_4:39349464-39349483 Msa0327570:intron 35.0%
TGTCAAAAGAAGCCACAATA+TGG + chr2_4:39349559-39349578 None:intergenic 35.0%
! ATATTGTGGCTTCTTTTGAC+AGG - chr2_4:39349558-39349577 Msa0327570:intron 35.0%
GTACCAAAACACTTTCATAC+AGG + chr2_4:39349660-39349679 None:intergenic 35.0%
GTACCAAAACACTTTCATAC+AGG + chr2_4:39349660-39349679 None:intergenic 35.0%
TATTTGGTATCTGTGACACA+AGG + chr2_4:39349785-39349804 None:intergenic 35.0%
GATACCAAATAAAGAGCAAG+TGG - chr2_4:39349794-39349813 Msa0327570:intron 35.0%
GAATCCACTTGCTCTTTATT+TGG + chr2_4:39349801-39349820 None:intergenic 35.0%
TCATAGGCACTATACTTTAG+AGG - chr2_4:39349990-39350009 Msa0327570:intron 35.0%
GACACAAAATAGACAATGCA+TGG - chr2_4:39350038-39350057 Msa0327570:intron 35.0%
CATGGCAATATGTTAAGACT+GGG - chr2_4:39350056-39350075 Msa0327570:intron 35.0%
CTGGGTATATGATATGAACT+AGG - chr2_4:39350074-39350093 Msa0327570:intron 35.0%
GGGTATATGATATGAACTAG+GGG - chr2_4:39350076-39350095 Msa0327570:intron 35.0%
ATTTGCAGAGTATGCTTACA+AGG - chr2_4:39350412-39350431 Msa0327570:CDS 35.0%
ACAATTCACTACTGGTGTAA+TGG - chr2_4:39350472-39350491 Msa0327570:intron 35.0%
AAAGAATCTGTTACTCAACC+TGG + chr2_4:39350502-39350521 None:intergenic 35.0%
AGGAAGACCTTAAAAATCAG+TGG + chr2_4:39350531-39350550 None:intergenic 35.0%
CTGACTACCATAATCATTCA+TGG - chr2_4:39350585-39350604 Msa0327570:CDS 35.0%
CGAGTTTCCATGAATGATTA+TGG + chr2_4:39350595-39350614 None:intergenic 35.0%
!!! TTCCTTTTTTGAAGAGGGAA+AGG - chr2_4:39351337-39351356 Msa0327570:intron 35.0%
CTTGTAATGACACACATGAA+CGG - chr2_4:39351456-39351475 Msa0327570:intron 35.0%
GATCTAAGTGTGTATAACTG+TGG - chr2_4:39351478-39351497 Msa0327570:intron 35.0%
CAGACTAAATAAGCTAGTGT+GGG + chr2_4:39351511-39351530 None:intergenic 35.0%
ACAGACTAAATAAGCTAGTG+TGG + chr2_4:39351512-39351531 None:intergenic 35.0%
!!! GGACAAGACTTCATTTTTTG+TGG + chr2_4:39351565-39351584 None:intergenic 35.0%
GATCCAGAAGTTTCAATTAG+TGG + chr2_4:39351826-39351845 None:intergenic 35.0%
! GAATTTACAAAGGCATACGA+GGG - chr2_4:39351901-39351920 Msa0327570:intron 35.0%
AAACGCTACAGTAGCTTATA+AGG + chr2_4:39351975-39351994 None:intergenic 35.0%
TTCAAGCTATCCTCATAAGT+TGG + chr2_4:39352025-39352044 None:intergenic 35.0%
AATTTAATTGCTCGTTTGCC+TGG - chr2_4:39352043-39352062 Msa0327570:intron 35.0%
TAAATGTAAGCAGCAATTCC+AGG + chr2_4:39352064-39352083 None:intergenic 35.0%
! TTGCTGCTTACATTTATCGA+CGG - chr2_4:39352068-39352087 Msa0327570:intron 35.0%
GGATGGAAAAATCATACCAT+TGG - chr2_4:39352229-39352248 Msa0327570:intron 35.0%
CATACCATTGGATGATTCTT+TGG - chr2_4:39352241-39352260 Msa0327570:intron 35.0%
! CATGTTAGGATTTGATGATC+CGG - chr2_4:39352286-39352305 Msa0327570:intron 35.0%
CTCATAAACTCAAGCATTTC+CGG + chr2_4:39352308-39352327 None:intergenic 35.0%
CAATCAAAATTGCAACTGGA+TGG + chr2_4:39352558-39352577 None:intergenic 35.0%
!! CATCCAGTTGCAATTTTGAT+TGG - chr2_4:39352556-39352575 Msa0327570:intron 35.0%
TCACCAATCAAAATTGCAAC+TGG + chr2_4:39352562-39352581 None:intergenic 35.0%
TGATTCCTGAGAGAATAGTA+TGG - chr2_4:39352663-39352682 Msa0327570:intron 35.0%
ATGAAATGGAAGAGGAAATG+TGG + chr2_4:39352898-39352917 None:intergenic 35.0%
CATGGTTTATGAAATGGAAG+AGG + chr2_4:39352906-39352925 None:intergenic 35.0%
ACAGCAAATACTAGTAATGC+AGG + chr2_4:39352984-39353003 None:intergenic 35.0%
AACTTCCTGTAACAACGTAT+TGG + chr2_4:39353189-39353208 None:intergenic 35.0%
AAAGCTAAATAGGAAGAGGA+AGG + chr2_4:39353352-39353371 None:intergenic 35.0%
AATTCAGTAGTGTAGATCAG+AGG - chr2_4:39353465-39353484 Msa0327570:intron 35.0%
TTGGAAACTTTCTCTTGAGA+AGG + chr2_4:39353657-39353676 None:intergenic 35.0%
!! AATTATAAGTTAGAGTGCCG+AGG - chr2_4:39353732-39353751 Msa0327570:intron 35.0%
GAGGACAATCCAATAATTAG+AGG - chr2_4:39353751-39353770 Msa0327570:intron 35.0%
GACAATCCAATAATTAGAGG+TGG - chr2_4:39353754-39353773 Msa0327570:intron 35.0%
AATCCAATAATTAGAGGTGG+AGG - chr2_4:39353757-39353776 Msa0327570:intron 35.0%
ATCCAATAATTAGAGGTGGA+GGG - chr2_4:39353758-39353777 Msa0327570:intron 35.0%
! ACGTCAAAGCTTTGTATAGT+TGG - chr2_4:39353857-39353876 Msa0327570:intron 35.0%
ATTAGATAGAGCCAGTTACA+TGG + chr2_4:39353888-39353907 None:intergenic 35.0%
!! ATGTAACTGGCTCTATCTAA+TGG - chr2_4:39353887-39353906 Msa0327570:intron 35.0%
GGCTTCTCAATAGAAGAATT+TGG + chr2_4:39354054-39354073 None:intergenic 35.0%
AAAAATACCAGCTGGAAAAG+TGG + chr2_4:39354223-39354242 None:intergenic 35.0%
! GGATTATAAAGGTTTAGCTC+GGG - chr2_4:39354529-39354548 Msa0327570:CDS 35.0%
CACAAGAAAGATGATCTGAT+AGG - chr2_4:39354577-39354596 Msa0327570:intron 35.0%
!! TTCTGTGTGGAGTATTTTGT+TGG - chr2_4:39354691-39354710 Msa0327570:intron 35.0%
! TTTTGATGAAGACTCAAGAG+AGG - chr2_4:39354728-39354747 Msa0327570:intron 35.0%
TAGACTTTCACGTATTAGCT+TGG - chr2_4:39354869-39354888 Msa0327570:intron 35.0%
AAGTGAGTATTCAGTACATC+TGG + chr2_4:39355001-39355020 None:intergenic 35.0%
AGCTATTATACCGTTCTCTT+TGG - chr2_4:39355212-39355231 Msa0327570:intron 35.0%
ACCTTTGCAAGGAAATAACA+GGG + chr2_4:39355279-39355298 None:intergenic 35.0%
AACCTTTGCAAGGAAATAAC+AGG + chr2_4:39355280-39355299 None:intergenic 35.0%
CAAATAGAGTAACCTTTGCA+AGG + chr2_4:39355290-39355309 None:intergenic 35.0%
GCAAAGGTTACTCTATTTGT+TGG - chr2_4:39355291-39355310 Msa0327570:intron 35.0%
!!! ATTTTAGTTGATATGGGACC+GGG - chr2_4:39355344-39355363 Msa0327570:intron 35.0%
ACTGGAGAAACTTGAGAAAT+TGG - chr2_4:39355404-39355423 Msa0327570:intron 35.0%
GAGAAACTTGAGAAATTGGT+CGG - chr2_4:39355408-39355427 Msa0327570:intron 35.0%
TTGATTGCTAAGATACACTC+TGG - chr2_4:39355465-39355484 Msa0327570:exon 35.0%
ATACACTCTGGTGATATGTA+GGG - chr2_4:39355477-39355496 Msa0327570:intron 35.0%
TAACCAGAAAAATAAGGGAG+GGG + chr2_4:39355559-39355578 None:intergenic 35.0%
! CTCGTATTTTTCGTCAAAAG+GGG + chr2_4:39355760-39355779 None:intergenic 35.0%
!! ATTCTGCTTTTCAACCCAAC+CGG - chr2_4:39347209-39347228 Msa0327570:three_prime_UTR 40.0%
!! AAAGAGAGAAGAGCGTTTAC+CGG + chr2_4:39347231-39347250 None:intergenic 40.0%
ATTGAGAAGTAGCTAGGGTT+TGG + chr2_4:39347266-39347285 None:intergenic 40.0%
GTGAGATTGAGAAGTAGCTA+GGG + chr2_4:39347271-39347290 None:intergenic 40.0%
CTAACTGAATTAGCGAGACT+AGG + chr2_4:39347635-39347654 None:intergenic 40.0%
GTCTCGCTAATTCAGTTAGA+TGG - chr2_4:39347636-39347655 Msa0327570:intron 40.0%
ATGTCATACAGTGTTAGTGG+AGG + chr2_4:39347675-39347694 None:intergenic 40.0%
GAGATGTCATACAGTGTTAG+TGG + chr2_4:39347678-39347697 None:intergenic 40.0%
!! TGTCTATTAAGCACTGACAC+TGG - chr2_4:39347841-39347860 Msa0327570:CDS 40.0%
ATGAACGTAAGCACATGTGT+CGG - chr2_4:39347903-39347922 Msa0327570:intron 40.0%
!! CTGTTGCATTGACTGATGAA+AGG + chr2_4:39348084-39348103 None:intergenic 40.0%
AACTCAGAGTATGCAGTTGA+AGG + chr2_4:39348505-39348524 None:intergenic 40.0%
TCAACTGCATACTCTGAGTT+AGG - chr2_4:39348505-39348524 Msa0327570:intron 40.0%
GAAGCCCACATTTATGTATC+AGG + chr2_4:39348538-39348557 None:intergenic 40.0%
TTGGCATAAAACCTGGTTGT+AGG - chr2_4:39349036-39349055 Msa0327570:intron 40.0%
AAGAAGCTGAAGAAAGAGCA+TGG - chr2_4:39349067-39349086 Msa0327570:intron 40.0%
!! AGAGCATGGAAGTGTTGAAT+TGG - chr2_4:39349081-39349100 Msa0327570:intron 40.0%
!! GAGCATGGAAGTGTTGAATT+GGG - chr2_4:39349082-39349101 Msa0327570:intron 40.0%
GGGAAAAATCACTGCTGATA+TGG - chr2_4:39349102-39349121 Msa0327570:intron 40.0%
AAGCTTATGGCCAAGAAAGT+GGG + chr2_4:39349189-39349208 None:intergenic 40.0%
TTTCAGGGAATTCGCTTTAG+GGG - chr2_4:39349465-39349484 Msa0327570:intron 40.0%
!!! CAGCCTGTATGAAAGTGTTT+TGG - chr2_4:39349654-39349673 Msa0327570:CDS 40.0%
!!! CAGCCTGTATGAAAGTGTTT+TGG - chr2_4:39349654-39349673 Msa0327570:CDS 40.0%
GTGACACAAGGTATGAATTG+AGG + chr2_4:39349773-39349792 None:intergenic 40.0%
CATAACCATGGCATTCAACT+TGG + chr2_4:39349935-39349954 None:intergenic 40.0%
GCATGGCAATATGTTAAGAC+TGG - chr2_4:39350055-39350074 Msa0327570:intron 40.0%
!! GAAACGCTCACTGATTTCTA+AGG - chr2_4:39350216-39350235 Msa0327570:intron 40.0%
ACCAAGAGCAAGTAGAATGT+TGG + chr2_4:39350300-39350319 None:intergenic 40.0%
!! ATGCACATGGCTCTAAATTG+TGG - chr2_4:39350373-39350392 Msa0327570:intron 40.0%
CCAGTAGTGAATTGTGTCAT+TGG + chr2_4:39350467-39350486 None:intergenic 40.0%
CCAATGACACAATTCACTAC+TGG - chr2_4:39350464-39350483 Msa0327570:intron 40.0%
AATCTGTTACTCAACCTGGA+GGG + chr2_4:39350498-39350517 None:intergenic 40.0%
AATCAAAGGGTGATAGGTAG+TGG - chr2_4:39350742-39350761 Msa0327570:intron 40.0%
TTTGCTGAGATTAGACAGAG+TGG + chr2_4:39350840-39350859 None:intergenic 40.0%
! TGTCAGGTGAGTTTTTGTGA+GGG + chr2_4:39350912-39350931 None:intergenic 40.0%
! ATGTCAGGTGAGTTTTTGTG+AGG + chr2_4:39350913-39350932 None:intergenic 40.0%
! TCCTTTGCATCTAGTTTCTG+TGG - chr2_4:39351054-39351073 Msa0327570:intron 40.0%
ACCACAGAAACTAGATGCAA+AGG + chr2_4:39351058-39351077 None:intergenic 40.0%
ATGTGCATTAGAGACGAAGT+GGG + chr2_4:39351155-39351174 None:intergenic 40.0%
TACATAGGAAAGAGAACAGG+AGG + chr2_4:39351269-39351288 None:intergenic 40.0%
CTCCTTTCCCTCTTCAAAAA+AGG + chr2_4:39351342-39351361 None:intergenic 40.0%
!!! CTTTTTTGAAGAGGGAAAGG+AGG - chr2_4:39351340-39351359 Msa0327570:intron 40.0%
CTCCCACTAATTGAAACTTC+TGG - chr2_4:39351820-39351839 Msa0327570:intron 40.0%
AATGAGTCTGTCATCAGGAA+CGG + chr2_4:39351848-39351867 None:intergenic 40.0%
TTGAGAATGAGTCTGTCATC+AGG + chr2_4:39351853-39351872 None:intergenic 40.0%
! CGAATTTACAAAGGCATACG+AGG - chr2_4:39351900-39351919 Msa0327570:intron 40.0%
GCAAACTATGCTCACATGTT+AGG - chr2_4:39352272-39352291 Msa0327570:intron 40.0%
CGGAAATGCTTGAGTTTATG+AGG - chr2_4:39352306-39352325 Msa0327570:intron 40.0%
ATGAATGGAACACAAACCTG+TGG + chr2_4:39352346-39352365 None:intergenic 40.0%
CAGCTCATCATGATCATAAG+AGG + chr2_4:39352379-39352398 None:intergenic 40.0%
TTCATGTGCAGTGATCATGA+AGG - chr2_4:39352474-39352493 Msa0327570:CDS 40.0%
AGTATGGTGTCCTTTGATTC+CGG - chr2_4:39352679-39352698 Msa0327570:intron 40.0%
CACATCCAATACGTTGTTAC+AGG - chr2_4:39353181-39353200 Msa0327570:intron 40.0%
TGTTACAGGAAGTTCTACGA+TGG - chr2_4:39353195-39353214 Msa0327570:intron 40.0%
! TACAAAGCTTTGACGTGCAT+TGG + chr2_4:39353853-39353872 None:intergenic 40.0%
AGTTGGTTGATCCATGTAAC+TGG - chr2_4:39353874-39353893 Msa0327570:intron 40.0%
! AGAATTTGGAACTGAGACAG+TGG + chr2_4:39354040-39354059 None:intergenic 40.0%
AAAACTCCATGTCCATATCC+AGG + chr2_4:39354136-39354155 None:intergenic 40.0%
AGCTGGAAAAGTGGATCATT+AGG + chr2_4:39354214-39354233 None:intergenic 40.0%
!! TAATGATCCACTTTTCCAGC+TGG - chr2_4:39354213-39354232 Msa0327570:intron 40.0%
ATACTCTCGAAGTTCGTTTC+TGG - chr2_4:39354271-39354290 Msa0327570:intron 40.0%
TGTGACTTTGTGATCCTTTC+AGG - chr2_4:39354314-39354333 Msa0327570:intron 40.0%
TTGCCTAACTTGGTCAGAAT+AGG + chr2_4:39354366-39354385 None:intergenic 40.0%
TATTCTGACCAAGTTAGGCA+AGG - chr2_4:39354365-39354384 Msa0327570:intron 40.0%
TGACATTACCTTGCCTAACT+TGG + chr2_4:39354376-39354395 None:intergenic 40.0%
ATCTATGGTCTAGACTCGAA+AGG + chr2_4:39354509-39354528 None:intergenic 40.0%
! TTTCGAGTCTAGACCATAGA+TGG - chr2_4:39354508-39354527 Msa0327570:intron 40.0%
GGTCCATCAAAATTTGATGC+AGG + chr2_4:39354973-39354992 None:intergenic 40.0%
! GGAGTACTACTGAACTACTA+TGG - chr2_4:39355078-39355097 Msa0327570:intron 40.0%
GAACTACTATGGTCTAACTG+AGG - chr2_4:39355089-39355108 Msa0327570:intron 40.0%
!! ACACTTTTTGGCCTTTCAAG+TGG + chr2_4:39355381-39355400 None:intergenic 40.0%
! TTCTCCAGTGTGACACTTTT+TGG + chr2_4:39355393-39355412 None:intergenic 40.0%
GATACACTCTGGTGATATGT+AGG - chr2_4:39355476-39355495 Msa0327570:intron 40.0%
GTTGGTATTTAGGAAAAGGG+TGG - chr2_4:39355608-39355627 Msa0327570:intron 40.0%
ACAGCATAAATTAGGTCCCA+AGG - chr2_4:39355668-39355687 Msa0327570:intron 40.0%
CAGCATAAATTAGGTCCCAA+GGG - chr2_4:39355669-39355688 Msa0327570:intron 40.0%
CTTTATTCTGATGCTCCCTT+GGG + chr2_4:39355687-39355706 None:intergenic 40.0%
GGTGAGATTGAGAAGTAGCT+AGG + chr2_4:39347272-39347291 None:intergenic 45.0%
! TCGGAGACACTGACACATTT+TGG + chr2_4:39348056-39348075 None:intergenic 45.0%
AATGCAACAGACGTCAGTGT+CGG - chr2_4:39348094-39348113 Msa0327570:intron 45.0%
! GGAACTAGTTCCAGAGTATC+AGG - chr2_4:39348373-39348392 Msa0327570:intron 45.0%
TGCAGACAAACCTGATACTC+TGG + chr2_4:39348386-39348405 None:intergenic 45.0%
AAACACTCCAAGACCCTGAT+TGG + chr2_4:39348856-39348875 None:intergenic 45.0%
CTTAACACGTTCCTACAACC+AGG + chr2_4:39349050-39349069 None:intergenic 45.0%
CAAGCTTATGGCCAAGAAAG+TGG + chr2_4:39349190-39349209 None:intergenic 45.0%
! AAGGTACTTGGTGGAATGAG+AGG - chr2_4:39349248-39349267 Msa0327570:intron 45.0%
! GAGGAATGACAGCTTTAGTG+TGG - chr2_4:39349267-39349286 Msa0327570:intron 45.0%
! ATGACAGCTTTAGTGTGGCT+AGG - chr2_4:39349272-39349291 Msa0327570:intron 45.0%
!!! GGAAGTGTTTTCTGACAGTC+AGG + chr2_4:39349501-39349520 None:intergenic 45.0%
GACTGTCAGAAAACACTTCC+AGG - chr2_4:39349501-39349520 Msa0327570:intron 45.0%
! GTGGCTTCTTTTGACAGGAA+AGG - chr2_4:39349563-39349582 Msa0327570:intron 45.0%
!!! GTGTTTTGGTACATGCTCTG+TGG - chr2_4:39349668-39349687 Msa0327570:CDS 45.0%
!!! GTGTTTTGGTACATGCTCTG+TGG - chr2_4:39349668-39349687 Msa0327570:CDS 45.0%
! GCAAGTGGATTCATTAGCTC+AGG - chr2_4:39349809-39349828 Msa0327570:intron 45.0%
TATGAACTAGGGGTCTCTCA+TGG - chr2_4:39350086-39350105 Msa0327570:intron 45.0%
! GTGTATGTGGTCCTTGTTTG+AGG - chr2_4:39350194-39350213 Msa0327570:intron 45.0%
AGTGAGCGTTTCCTCAAACA+AGG + chr2_4:39350208-39350227 None:intergenic 45.0%
GCCAACATTCTACTTGCTCT+TGG - chr2_4:39350296-39350315 Msa0327570:intron 45.0%
GTCATTGGATGAGCAGAAAC+AGG + chr2_4:39350452-39350471 None:intergenic 45.0%
GAATCTGTTACTCAACCTGG+AGG + chr2_4:39350499-39350518 None:intergenic 45.0%
! TCAGGTGAGTTTTTGTGAGG+GGG + chr2_4:39350910-39350929 None:intergenic 45.0%
! GTCAGGTGAGTTTTTGTGAG+GGG + chr2_4:39350911-39350930 None:intergenic 45.0%
GCAGTCACGAAAAACATGTC+AGG + chr2_4:39350928-39350947 None:intergenic 45.0%
! GACATGTTTTTCGTGACTGC+TGG - chr2_4:39350928-39350947 Msa0327570:intron 45.0%
CATGTGCATTAGAGACGAAG+TGG + chr2_4:39351156-39351175 None:intergenic 45.0%
GGTGGAGAGCGAATTTACAA+AGG - chr2_4:39351891-39351910 Msa0327570:intron 45.0%
! TTTACAAAGGCATACGAGGG+TGG - chr2_4:39351904-39351923 Msa0327570:intron 45.0%
! TTACAAAGGCATACGAGGGT+GGG - chr2_4:39351905-39351924 Msa0327570:intron 45.0%
AGGGTGGGATACATAAGTCA+AGG - chr2_4:39351920-39351939 Msa0327570:intron 45.0%
!! ACTGTAGCGTTTTTGCTGTG+TGG - chr2_4:39351983-39352002 Msa0327570:intron 45.0%
!! CTGTAGCGTTTTTGCTGTGT+GGG - chr2_4:39351984-39352003 Msa0327570:intron 45.0%
!! CGTTTTTGCTGTGTGGGTAT+AGG - chr2_4:39351990-39352009 Msa0327570:intron 45.0%
TGCTGTGTGGGTATAGGTAT+TGG - chr2_4:39351996-39352015 Msa0327570:intron 45.0%
GCTGTGTGGGTATAGGTATT+GGG - chr2_4:39351997-39352016 Msa0327570:intron 45.0%
GTATTGGGAGCCAACTTATG+AGG - chr2_4:39352012-39352031 Msa0327570:intron 45.0%
! GGCTGTATGTTTCTATCCAC+AGG - chr2_4:39352327-39352346 Msa0327570:intron 45.0%
AGAGGTGACGTCGTTATGAA+TGG + chr2_4:39352361-39352380 None:intergenic 45.0%
ATGTGCAGTGATCATGAAGG+CGG - chr2_4:39352477-39352496 Msa0327570:CDS 45.0%
GGACACCATACTATTCTCTC+AGG + chr2_4:39352671-39352690 None:intergenic 45.0%
GCAGCTGCAAATGCAAGATA+AGG + chr2_4:39352773-39352792 None:intergenic 45.0%
! GATTGGCTAAACCATGCAGT+GGG + chr2_4:39352814-39352833 None:intergenic 45.0%
! TGATTGGCTAAACCATGCAG+TGG + chr2_4:39352815-39352834 None:intergenic 45.0%
ACTGCATGGTTTAGCCAATC+AGG - chr2_4:39352814-39352833 Msa0327570:intron 45.0%
GGTCAGAGACTATCCAAACA+TGG + chr2_4:39352924-39352943 None:intergenic 45.0%
TAAAACTCTGAACAGTGGCC+AGG - chr2_4:39353286-39353305 Msa0327570:intron 45.0%
CTAAATAGGAAGAGGAAGGC+AGG + chr2_4:39353348-39353367 None:intergenic 45.0%
!!! TTTTTTGGCTGAAGGGCATC+AGG - chr2_4:39353583-39353602 Msa0327570:intron 45.0%
!!! TTTTTGGCTGAAGGGCATCA+GGG - chr2_4:39353584-39353603 Msa0327570:intron 45.0%
! TGCTGTCAAGTTGTCTACAG+GGG + chr2_4:39354075-39354094 None:intergenic 45.0%
! CTGCTGTCAAGTTGTCTACA+GGG + chr2_4:39354076-39354095 None:intergenic 45.0%
CTGTAGACAACTTGACAGCA+GGG - chr2_4:39354075-39354094 Msa0327570:intron 45.0%
ATCCAAGATACACTTGCCAG+AGG - chr2_4:39354167-39354186 Msa0327570:intron 45.0%
TCCAAGATACACTTGCCAGA+GGG - chr2_4:39354168-39354187 Msa0327570:intron 45.0%
CCTAACTTGGTCAGAATAGG+AGG + chr2_4:39354363-39354382 None:intergenic 45.0%
CCTCCTATTCTGACCAAGTT+AGG - chr2_4:39354360-39354379 Msa0327570:intron 45.0%
ACAGAACTCACCATGATCAG+CGG + chr2_4:39354677-39354696 None:intergenic 45.0%
TGATCATGGTGAGTTCTGTG+TGG - chr2_4:39354678-39354697 Msa0327570:intron 45.0%
TTGAGGATGGTCAGTCTACA+CGG - chr2_4:39354816-39354835 Msa0327570:intron 45.0%
TGAGCATCAACATTAGGCCA+TGG + chr2_4:39355054-39355073 None:intergenic 45.0%
CCACTGTGAGCATCAACATT+AGG + chr2_4:39355060-39355079 None:intergenic 45.0%
CCTAATGTTGATGCTCACAG+TGG - chr2_4:39355057-39355076 Msa0327570:intron 45.0%
!! TTTGGTGTCGCAAGGAGTAT+TGG - chr2_4:39355230-39355249 Msa0327570:intron 45.0%
!! GCCCTGTTATTTCCTTGCAA+AGG - chr2_4:39355275-39355294 Msa0327570:CDS 45.0%
! CTCTTGGAATGCCACTTGAA+AGG - chr2_4:39355367-39355386 Msa0327570:intron 45.0%
!! AAGGCCAAAAAGTGTCACAC+TGG - chr2_4:39355386-39355405 Msa0327570:intron 45.0%
!!! AGACCCCTCCCTTATTTTTC+TGG - chr2_4:39355553-39355572 Msa0327570:intron 45.0%
CCTTTATTCTGATGCTCCCT+TGG + chr2_4:39355688-39355707 None:intergenic 45.0%
!! CCAAGGGAGCATCAGAATAA+AGG - chr2_4:39355685-39355704 Msa0327570:intron 45.0%
!!! TAAATTTTTCTTTTATAATT+CGG - chr2_4:39350557-39350576 Msa0327570:intron 5.0%
!! TAATATTATTATCAAATTAT+GGG + chr2_4:39350695-39350714 None:intergenic 5.0%
!! TTAATATTATTATCAAATTA+TGG + chr2_4:39350696-39350715 None:intergenic 5.0%
!! TTTATAATAAAATTAATCAA+AGG - chr2_4:39350728-39350747 Msa0327570:intron 5.0%
!! TTATAATAAAATTAATCAAA+GGG - chr2_4:39350729-39350748 Msa0327570:intron 5.0%
!!! AATTATTTAATATTTTTTGT+GGG + chr2_4:39351587-39351606 None:intergenic 5.0%
!!! AAATTATTTAATATTTTTTG+TGG + chr2_4:39351588-39351607 None:intergenic 5.0%
!!! AAAATATTAAATAATTGTTT+TGG - chr2_4:39351647-39351666 Msa0327570:intron 5.0%
!!! ATAAAATTTTCTTTAATAAA+AGG - chr2_4:39353557-39353576 Msa0327570:intron 5.0%
!!! TAAATTTTATACATTAATTT+TGG + chr2_4:39353676-39353695 None:intergenic 5.0%
!! AAATTAATGTATAAAATTTA+TGG - chr2_4:39353676-39353695 Msa0327570:intron 5.0%
!! GAGAAGAGCGTTTACCGGTT+GGG + chr2_4:39347226-39347245 None:intergenic 50.0%
!! AGAGAAGAGCGTTTACCGGT+TGG + chr2_4:39347227-39347246 None:intergenic 50.0%
! TGGAAAGCGCAGAAACGCTT+CGG + chr2_4:39347471-39347490 None:intergenic 50.0%
! GTAAGCACATGTGTCGGTGT+CGG - chr2_4:39347909-39347928 Msa0327570:intron 50.0%
CACCAACATGTGTCAGACTC+TGG - chr2_4:39347933-39347952 Msa0327570:intron 50.0%
GTCCAGAGTCTGACACATGT+TGG + chr2_4:39347938-39347957 None:intergenic 50.0%
CACCAACATGTGTCAGACTC+CGG - chr2_4:39347933-39347952 Msa0327570:intron 50.0%
TCGGGTATCAATGTCGTGTC+CGG + chr2_4:39347979-39347998 None:intergenic 50.0%
AGCCAATCCAATCAGGGTCT+TGG - chr2_4:39348846-39348865 Msa0327570:intron 50.0%
CTCCAAGACCCTGATTGGAT+TGG + chr2_4:39348851-39348870 None:intergenic 50.0%
! ACACTTCCAGGTGCTTTTCC+TGG - chr2_4:39349513-39349532 Msa0327570:intron 50.0%
! TTCCAGGTGCTTTTCCTGGT+GGG - chr2_4:39349517-39349536 Msa0327570:intron 50.0%
CACAATATGGCCTCAGGCAA+AGG + chr2_4:39349546-39349565 None:intergenic 50.0%
CTTTGCCTGAGGCCATATTG+TGG - chr2_4:39349544-39349563 Msa0327570:intron 50.0%
AGAAGCCACAATATGGCCTC+AGG + chr2_4:39349552-39349571 None:intergenic 50.0%
! AGCGTCCAAGTTGAATGCCA+TGG - chr2_4:39349927-39349946 Msa0327570:intron 50.0%
GTGAAATCTCACGTGTGCAG+AGG - chr2_4:39350318-39350337 Msa0327570:intron 50.0%
! GATTTTTGACCTCTGCGACC+CGG + chr2_4:39351207-39351226 None:intergenic 50.0%
! GCATTTGCAGCTGCTCTGAA+TGG - chr2_4:39352779-39352798 Msa0327570:intron 50.0%
! GCTGCTCTGAATGGTTTAGC+CGG - chr2_4:39352788-39352807 Msa0327570:intron 50.0%
CGCCCTCCACCTCTAATTAT+TGG + chr2_4:39353763-39353782 None:intergenic 50.0%
! CCTGCTGTCAAGTTGTCTAC+AGG + chr2_4:39354077-39354096 None:intergenic 50.0%
CCTGTAGACAACTTGACAGC+AGG - chr2_4:39354074-39354093 Msa0327570:intron 50.0%
TTGGATTTGCAGGTTGTGCC+TGG - chr2_4:39354115-39354134 Msa0327570:intron 50.0%
TTGCAGGTTGTGCCTGGATA+TGG - chr2_4:39354121-39354140 Msa0327570:intron 50.0%
GTTGTGCCTGGATATGGACA+TGG - chr2_4:39354127-39354146 Msa0327570:intron 50.0%
TCCCTCTGGCAAGTGTATCT+TGG + chr2_4:39354172-39354191 None:intergenic 50.0%
GCTTCAATGCAAACTCCCTC+TGG + chr2_4:39354186-39354205 None:intergenic 50.0%
! AAGGTTTAGCTCGGGCAACA+AGG - chr2_4:39354537-39354556 Msa0327570:CDS 50.0%
GAAAACATCCCCGCTGATCA+TGG - chr2_4:39354664-39354683 Msa0327570:intron 50.0%
AGAACTCACCATGATCAGCG+GGG + chr2_4:39354675-39354694 None:intergenic 50.0%
CAGAACTCACCATGATCAGC+GGG + chr2_4:39354676-39354695 None:intergenic 50.0%
CCTTGCGACACCAAAGAGAA+CGG + chr2_4:39355225-39355244 None:intergenic 50.0%
!! GTCGCAAGGAGTATTGGAGT+TGG - chr2_4:39355236-39355255 Msa0327570:intron 50.0%
ACAGGGCATGACAAACCTGA+GGG + chr2_4:39355262-39355281 None:intergenic 50.0%
AACAGGGCATGACAAACCTG+AGG + chr2_4:39355263-39355282 None:intergenic 50.0%
TACGACGCGAGATCGAAGCT+TGG + chr2_4:39347491-39347510 None:intergenic 55.0%
TCGTCGTCAGCGTTTGTGTC+CGG + chr2_4:39347768-39347787 None:intergenic 55.0%
GTCCGGAGTCTGACACATGT+TGG + chr2_4:39347962-39347981 None:intergenic 55.0%
CTCAGCTGTTGACCCAGATG+AGG - chr2_4:39349295-39349314 Msa0327570:intron 55.0%
! CTTCCAGGTGCTTTTCCTGG+TGG - chr2_4:39349516-39349535 Msa0327570:intron 55.0%
! TCCAGGTGCTTTTCCTGGTG+GGG - chr2_4:39349518-39349537 Msa0327570:intron 55.0%
CGAAGTCGTGCGAAAATCCC+AGG - chr2_4:39349837-39349856 Msa0327570:intron 55.0%
AACTAGGGGTCTCTCATGGC+AGG - chr2_4:39350090-39350109 Msa0327570:CDS 55.0%
TACTGGTGTAATGGCCCTCC+AGG - chr2_4:39350481-39350500 Msa0327570:intron 55.0%
GAGAATTAACCGGGTCGCAG+AGG - chr2_4:39351195-39351214 Msa0327570:intron 55.0%
!! CCGTTCTCTTTGGTGTCGCA+AGG - chr2_4:39355222-39355241 Msa0327570:intron 55.0%
!! GAGTATTGGAGTTGGCCCTC+AGG - chr2_4:39355244-39355263 Msa0327570:CDS 55.0%
TTGATATGGGACCGGGCTCT+TGG - chr2_4:39355351-39355370 Msa0327570:intron 55.0%
CAAGTGGCATTCCAAGAGCC+CGG + chr2_4:39355365-39355384 None:intergenic 55.0%
!! TCCCCACCAGGAAAAGCACC+TGG + chr2_4:39349522-39349541 None:intergenic 60.0%
GGCTAAACCATGCAGTGGGC+CGG + chr2_4:39352810-39352829 None:intergenic 60.0%
TCAGGCAAAGGCTCCCCACC+AGG + chr2_4:39349534-39349553 None:intergenic 65.0%
TGGTGGGGAGCCTTTGCCTG+AGG - chr2_4:39349533-39349552 Msa0327570:intron 65.0%
GGTTTAGCCGGCCCACTGCA+TGG - chr2_4:39352800-39352819 Msa0327570:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 39347101 39355821 39347101 ID=Msa0327570;Name=Msa0327570
chr2_4 mRNA 39347101 39355821 39347101 ID=Msa0327570-mRNA-1;Parent=Msa0327570;Name=Msa0327570-mRNA-1;_AED=0.05;_eAED=0.05;_QI=152|1|1|1|0.94|0.9|20|378|472
chr2_4 exon 39347101 39347571 39347101 ID=Msa0327570-mRNA-1:exon:11901;Parent=Msa0327570-mRNA-1
chr2_4 exon 39347657 39347708 39347657 ID=Msa0327570-mRNA-1:exon:11900;Parent=Msa0327570-mRNA-1
chr2_4 exon 39347807 39347880 39347807 ID=Msa0327570-mRNA-1:exon:11899;Parent=Msa0327570-mRNA-1
chr2_4 exon 39348536 39348586 39348536 ID=Msa0327570-mRNA-1:exon:11898;Parent=Msa0327570-mRNA-1
chr2_4 exon 39348688 39348795 39348688 ID=Msa0327570-mRNA-1:exon:11897;Parent=Msa0327570-mRNA-1
chr2_4 exon 39349615 39349719 39349615 ID=Msa0327570-mRNA-1:exon:11896;Parent=Msa0327570-mRNA-1
chr2_4 exon 39350087 39350173 39350087 ID=Msa0327570-mRNA-1:exon:11895;Parent=Msa0327570-mRNA-1
chr2_4 exon 39350395 39350437 39350395 ID=Msa0327570-mRNA-1:exon:11894;Parent=Msa0327570-mRNA-1
chr2_4 exon 39350574 39350702 39350574 ID=Msa0327570-mRNA-1:exon:11893;Parent=Msa0327570-mRNA-1
chr2_4 exon 39350833 39350910 39350833 ID=Msa0327570-mRNA-1:exon:11892;Parent=Msa0327570-mRNA-1
chr2_4 exon 39350981 39351030 39350981 ID=Msa0327570-mRNA-1:exon:11891;Parent=Msa0327570-mRNA-1
chr2_4 exon 39352420 39352502 39352420 ID=Msa0327570-mRNA-1:exon:11890;Parent=Msa0327570-mRNA-1
chr2_4 exon 39353064 39353127 39353064 ID=Msa0327570-mRNA-1:exon:11889;Parent=Msa0327570-mRNA-1
chr2_4 exon 39353338 39353451 39353338 ID=Msa0327570-mRNA-1:exon:11888;Parent=Msa0327570-mRNA-1
chr2_4 exon 39353606 39353671 39353606 ID=Msa0327570-mRNA-1:exon:11887;Parent=Msa0327570-mRNA-1
chr2_4 exon 39353799 39353864 39353799 ID=Msa0327570-mRNA-1:exon:11886;Parent=Msa0327570-mRNA-1
chr2_4 exon 39354528 39354569 39354528 ID=Msa0327570-mRNA-1:exon:11885;Parent=Msa0327570-mRNA-1
chr2_4 exon 39355237 39355299 39355237 ID=Msa0327570-mRNA-1:exon:11884;Parent=Msa0327570-mRNA-1
chr2_4 exon 39355415 39355487 39355415 ID=Msa0327570-mRNA-1:exon:11883;Parent=Msa0327570-mRNA-1
chr2_4 exon 39355692 39355821 39355692 ID=Msa0327570-mRNA-1:exon:11882;Parent=Msa0327570-mRNA-1
chr2_4 five_prime_UTR 39355692 39355821 39355692 ID=Msa0327570-mRNA-1:five_prime_utr;Parent=Msa0327570-mRNA-1
chr2_4 five_prime_UTR 39355466 39355487 39355466 ID=Msa0327570-mRNA-1:five_prime_utr;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39355415 39355465 39355415 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39355237 39355299 39355237 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39354528 39354569 39354528 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39353799 39353864 39353799 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39353606 39353671 39353606 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39353338 39353451 39353338 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39353064 39353127 39353064 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39352420 39352502 39352420 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39350981 39351030 39350981 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39350833 39350910 39350833 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39350574 39350702 39350574 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39350395 39350437 39350395 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39350087 39350173 39350087 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39349615 39349719 39349615 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39348688 39348795 39348688 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39348536 39348586 39348536 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39347807 39347880 39347807 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39347657 39347708 39347657 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 CDS 39347479 39347571 39347479 ID=Msa0327570-mRNA-1:cds;Parent=Msa0327570-mRNA-1
chr2_4 three_prime_UTR 39347101 39347478 39347101 ID=Msa0327570-mRNA-1:three_prime_utr;Parent=Msa0327570-mRNA-1
Gene Sequence

>Msa0327570

ATGGCGTTTTTCCGAAGCGTTTCTGCGCTTTCCAAGCTTCGATCTCGCGTCGGTCAGCAACCTAGTCTCGCTAATTCAGTTAGATGGCTTCAAATGCAGACCTCCACTAACACTGATCTTTTTACTGAGATGAAGGAACTAGTTCCAGAGTATCAGGAACGTGTTAAGAAGCTGAAGAAAGAGCATGGAAGTGTTGAATTGGGAAAAATCACTGCTGATATGGTACTTGGTGGAATGAGAGGAATGACAGCTTTAGTGTGGCTAGGCTCAGCTGTTGACCCAGATGAGGGAATTCGCTTTAGGGGCATGACAATTCCTGACTGTCAGAAAACACTTCCAGGTGCTTTTCCTGGTGGGGAGCCTTTGCCTGAGGCCATATTGTGGCTTCTTTTGACAGGAAAGATACCAAATAAAGAGCAAGTGGATTCATTAGCTCAGGAATTGCGAAGTCGTGCGAAAATCCCAGAGTATGCTTACAAGGCAATTGATGCACTGCCTGTTTCTGCTCATCCAATGACACAATTCACTACTGGTGTAATGGCCCTCCAGGTGGAGAGCGAATTTACAAAGGCATACGAGGGTGGGATACATAAGTCAAGGTATTGGGAGCCAACTTATGAGGATAGCTTGAATTTAATTGCTCGTTTGCCTGGAATTGCTGCTTACATTTATCGACGGATATACAAGGATGGAAAAATCATACCATTGGATGATTCTTTGGATTATGGTGCAAACTATGCTCACATGTTAGGATTTGATGATCCGGAAATGCTTGAGTTTATGAGGCTGTATGTTTCTATCCACAGTGATCATGAAGGCGGCAACGTTAGTTCTCACACAGCTCATCTAGTTGCTAGTTCACTATCAGATCCTTATCTTGCATTTGCAGCTGCTCTGAATGGTTTAGCCGGCCCACTGCATGGTTTAGCCAATCAGGAAGTTCTACGATGGATCAGAAATATAGTTAAGGAGTTTGGAACTCCAAACATAAGTACAGAACAATTGAGCGACTACATTCATAAAACTCTGAACAGTGGCCAGGTTGTGCCTGGATATGGACATGGAGTTTTGCGCAATACTGATCCAAGATACACTTGCCAGAGGGAGTTTGCATTGAAGCATTTACCTAATGATCCACTTTTCCAGCTGGTGTCAAAAATTAAAGAGGTTGTGCCTCCTATTCTGACCAAGTTAGGCAAGGTTAAAAATCCATGGCCTAATGTTGATGCTCACAGTGGAGTACTACTGAACTACTATGGTCTAACTGAGGAAAACTATTATACCGTTCTCTTTGGTGTCGCAAGGAGTATTGGAGTTGGCCCTCAGTTGATATGGGACCGGGCTCTTGGAATGCCACTTGAAAGGCCAAAAAGTGTCACACTGGAGAAACTTGAGAAATTGGTCGGCGCTTCATCCTGA

Protein sequence

>Msa0327570

MAFFRSVSALSKLRSRVGQQPSLANSVRWLQMQTSTNTDLFTEMKELVPEYQERVKKLKKEHGSVELGKITADMVLGGMRGMTALVWLGSAVDPDEGIRFRGMTIPDCQKTLPGAFPGGEPLPEAILWLLLTGKIPNKEQVDSLAQELRSRAKIPEYAYKAIDALPVSAHPMTQFTTGVMALQVESEFTKAYEGGIHKSRYWEPTYEDSLNLIARLPGIAAYIYRRIYKDGKIIPLDDSLDYGANYAHMLGFDDPEMLEFMRLYVSIHSDHEGGNVSSHTAHLVASSLSDPYLAFAAALNGLAGPLHGLANQEVLRWIRNIVKEFGTPNISTEQLSDYIHKTLNSGQVVPGYGHGVLRNTDPRYTCQREFALKHLPNDPLFQLVSKIKEVVPPILTKLGKVKNPWPNVDAHSGVLLNYYGLTEENYYTVLFGVARSIGVGPQLIWDRALGMPLERPKSVTLEKLEKLVGASS*