Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328220 | XP_013463548.1 | 95.881 | 874 | 16 | 3 | 1 | 855 | 1 | 873 | 0.0 | 1721 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328220 | sp|Q3UDE2|TTL12_MOUSE | 37.126 | 501 | 250 | 14 | 381 | 848 | 161 | 629 | 1.97e-94 | 313 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0246180 | Msa0328220 | 0.814521 | 1.476823e-51 | -8.615850e-47 |
| Msa0284700 | Msa0328220 | 0.802846 | 4.621992e-49 | -8.615850e-47 |
| Msa0328220 | Msa0328290 | 0.909883 | 3.476617e-82 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328220 | MtrunA17_Chr2g0300641 | 95.881 | 874 | 16 | 3 | 1 | 855 | 1 | 873 | 0.0 | 1721 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328220 | AT1G77550.1 | 65.665 | 865 | 266 | 6 | 10 | 855 | 3 | 855 | 0.0 | 1158 |
Find 220 sgRNAs with CRISPR-Local
Find 528 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCACTTTCCAATATTT+TGG | 0.092480 | 2_4:+40423896 | None:intergenic |
| CATATTATATCTGCATCTTT+TGG | 0.139160 | 2_4:+40421124 | None:intergenic |
| TATTCCTGTCAGATTGTTTC+TGG | 0.155637 | 2_4:-40420408 | Msa0328220:CDS |
| CAATTTCGGGGAGTGGGCTT+TGG | 0.216553 | 2_4:-40424643 | Msa0328220:CDS |
| CAACTTTCACAAGCAATTTC+GGG | 0.220240 | 2_4:-40424656 | Msa0328220:CDS |
| GTCGAAGAAGGCTTTAATTA+AGG | 0.230506 | 2_4:+40419419 | None:intergenic |
| CACATGATGGGCGTCCTTTA+CGG | 0.233516 | 2_4:-40422699 | Msa0328220:CDS |
| TCAACTTTCACAAGCAATTT+CGG | 0.237496 | 2_4:-40424657 | Msa0328220:CDS |
| ACTCATCTGTCTCAACTTAT+TGG | 0.250244 | 2_4:-40420664 | Msa0328220:CDS |
| CCAAACATTTCTGAACTAAA+TGG | 0.271808 | 2_4:-40423930 | Msa0328220:CDS |
| GGGAAGTGCCATTGAAATTC+TGG | 0.272207 | 2_4:-40423961 | Msa0328220:CDS |
| AGTTTCCATGAGTCGGATTA+TGG | 0.278974 | 2_4:+40420537 | None:intergenic |
| TGCACTCGTGACTTTCTTCT+TGG | 0.281535 | 2_4:-40422974 | Msa0328220:CDS |
| CTGTATCTCTTGCAGTTAAA+TGG | 0.290895 | 2_4:-40419960 | Msa0328220:intron |
| TTAGTGGCACTTAGCCTATA+TGG | 0.294517 | 2_4:-40424931 | Msa0328220:CDS |
| AGGTACGTGATGGATGAATT+TGG | 0.296880 | 2_4:-40423441 | Msa0328220:CDS |
| GTCGATATTCCTGGTCCTCT+TGG | 0.300317 | 2_4:-40423984 | Msa0328220:CDS |
| CAGGTTGTTCAATATACTTC+TGG | 0.310081 | 2_4:+40420500 | None:intergenic |
| TATTTGTGCATCCAAAATAT+TGG | 0.310689 | 2_4:-40423907 | Msa0328220:CDS |
| ACTTCTTGAATAATCAATTC+AGG | 0.312500 | 2_4:+40424892 | None:intergenic |
| CAAAAGATGCAGATATAATA+TGG | 0.314062 | 2_4:-40421123 | Msa0328220:CDS |
| AGCTAACAACCAATATTCTT+TGG | 0.314596 | 2_4:-40420291 | Msa0328220:CDS |
| CGTGACTTTCTTCTTGGTAT+TGG | 0.317812 | 2_4:-40422968 | Msa0328220:CDS |
| TGAAACTCATTTCACTGTTA+TGG | 0.319368 | 2_4:-40420246 | Msa0328220:intron |
| AATAGTGCGGGCCATGTTCC+AGG | 0.320213 | 2_4:+40420588 | None:intergenic |
| GTTGATGATGATGATGTTTC+GGG | 0.325483 | 2_4:-40425754 | Msa0328220:CDS |
| AATTTCGGGGAGTGGGCTTT+GGG | 0.325758 | 2_4:-40424642 | Msa0328220:CDS |
| ACTTACCAATTCTGAAGAAC+TGG | 0.326545 | 2_4:+40424826 | None:intergenic |
| TCAGCTTGATCAGCATTAGA+TGG | 0.330080 | 2_4:+40424588 | None:intergenic |
| TGATGATATGTTTCTCTCAT+TGG | 0.333223 | 2_4:-40425626 | Msa0328220:CDS |
| ACTTGGATAAAATAGTTCTC+TGG | 0.333720 | 2_4:+40422899 | None:intergenic |
| ATTCTCTTGCTTACGTTCAT+TGG | 0.335166 | 2_4:-40424133 | Msa0328220:CDS |
| AATAAATCACAAGAATATTA+AGG | 0.336524 | 2_4:-40420111 | Msa0328220:CDS |
| ACTCGCCGCTTCGGGTTTAC+CGG | 0.347515 | 2_4:-40426539 | Msa0328220:CDS |
| TCGATATTCCTGGTCCTCTT+GGG | 0.347686 | 2_4:-40423983 | Msa0328220:CDS |
| TATGGCCAACACGGAATGTT+TGG | 0.355349 | 2_4:-40423009 | Msa0328220:CDS |
| TCTTAAGGAGTTACCAGAAC+TGG | 0.362100 | 2_4:-40424691 | Msa0328220:CDS |
| ACATGATGGGCGTCCTTTAC+GGG | 0.362567 | 2_4:-40422698 | Msa0328220:CDS |
| ATAACCCAGTTCTTCAGAAT+TGG | 0.365410 | 2_4:-40424831 | Msa0328220:intron |
| AAGTTATACATCTAATTTCC+AGG | 0.366200 | 2_4:+40419369 | None:intergenic |
| TCTAGTGATGGTGATCTTGC+AGG | 0.366268 | 2_4:-40424720 | Msa0328220:intron |
| AGACGGCGGTGGAGGGATTC+CGG | 0.366662 | 2_4:+40426520 | None:intergenic |
| TTGTAAGCTTGTTTCCATAT+AGG | 0.366689 | 2_4:+40424917 | None:intergenic |
| GGCTCATCAGGAGTCCATTC+AGG | 0.370563 | 2_4:+40423840 | None:intergenic |
| TCTTGCAGGTATTATTCTTA+AGG | 0.373169 | 2_4:-40424706 | Msa0328220:CDS |
| CGGAATTCTACTCGCCGCTT+CGG | 0.374406 | 2_4:-40426548 | Msa0328220:CDS |
| GTTGAAGAAATCACAACCTT+TGG | 0.377369 | 2_4:+40419521 | None:intergenic |
| CTCGCCGCCGTCGAAGGTTT+CGG | 0.378738 | 2_4:+40426480 | None:intergenic |
| CTTTCCCTTTCAGAATTTAG+TGG | 0.379886 | 2_4:-40424947 | Msa0328220:intron |
| AAAGGTGCCACTCTAAAGTT+TGG | 0.383885 | 2_4:+40423393 | None:intergenic |
| GGAATTCTACTCGCCGCTTC+GGG | 0.384701 | 2_4:-40426547 | Msa0328220:CDS |
| TGAACAACCTGCTTTATTCC+AGG | 0.384791 | 2_4:-40420488 | Msa0328220:CDS |
| GATGTGTGTGGATATTGATT+TGG | 0.393550 | 2_4:-40425800 | Msa0328220:CDS |
| TTGCAAGCTCGTGTACAATC+AGG | 0.394641 | 2_4:+40419582 | None:intergenic |
| GAAGACTTCGCCAAAGTTCA+CGG | 0.397878 | 2_4:-40426568 | Msa0328220:CDS |
| GGACTTGCCTGCTAGATTCC+CGG | 0.398457 | 2_4:-40425605 | Msa0328220:intron |
| TGTTGATGATGATGATGTTT+CGG | 0.400062 | 2_4:-40425755 | Msa0328220:CDS |
| TTCTTCCTCGCCTTCCTGAA+TGG | 0.401426 | 2_4:-40423854 | Msa0328220:CDS |
| CATTAATCAATTTCCATTTG+AGG | 0.403628 | 2_4:-40421041 | Msa0328220:CDS |
| GAATTATAAATCTCCAGTTC+TGG | 0.404024 | 2_4:+40424678 | None:intergenic |
| GAGAAGGACTAGACAACCTT+TGG | 0.406467 | 2_4:-40420621 | Msa0328220:CDS |
| CTTTCGTACTTGAACATTCG+TGG | 0.406787 | 2_4:-40424207 | Msa0328220:CDS |
| CGGTCATGAATAGGCTCATC+AGG | 0.408012 | 2_4:+40423828 | None:intergenic |
| CCAACATCAAGGGCAATTTA+CGG | 0.409401 | 2_4:-40419856 | Msa0328220:CDS |
| CCATTTAGTTCAGAAATGTT+TGG | 0.413238 | 2_4:+40423930 | None:intergenic |
| AGCAAGTTTGGTTATTTGGC+TGG | 0.415473 | 2_4:-40419263 | Msa0328220:three_prime_UTR |
| GGTTCGGAGCATGCACCCTT+TGG | 0.416642 | 2_4:-40420434 | Msa0328220:CDS |
| GCCACATTGCACTTATAATA+CGG | 0.416942 | 2_4:+40423808 | None:intergenic |
| CTCTCAGAGGACTGCACAGT+GGG | 0.420225 | 2_4:+40422736 | None:intergenic |
| GGTTAGTGTTGTAGAAATGT+TGG | 0.423832 | 2_4:-40425725 | Msa0328220:CDS |
| ATAATCCGACTCATGGAAAC+TGG | 0.425940 | 2_4:-40420535 | Msa0328220:CDS |
| CTTATAATACGGTCATGAAT+AGG | 0.427782 | 2_4:+40423819 | None:intergenic |
| ATGAATTTGGTTCTGCTTTG+CGG | 0.431191 | 2_4:-40423428 | Msa0328220:CDS |
| CTCTTGCTTACGTTCATTGG+AGG | 0.433275 | 2_4:-40424130 | Msa0328220:intron |
| ATAACAAACAGCGGTAATAA+TGG | 0.433806 | 2_4:-40419240 | Msa0328220:three_prime_UTR |
| TTGAGATGGTTGGAGCTTGA+TGG | 0.434714 | 2_4:-40425661 | Msa0328220:CDS |
| CGAAAGGGATGGCAAACAAA+TGG | 0.435231 | 2_4:+40424224 | None:intergenic |
| CTTGGATAAAATAGTTCTCT+GGG | 0.435795 | 2_4:+40422900 | None:intergenic |
| AAGAGATTCCAGAATTTCAA+TGG | 0.443802 | 2_4:+40423953 | None:intergenic |
| GTAACTGAGCTTTGCTCCAA+TGG | 0.447485 | 2_4:+40424180 | None:intergenic |
| CACAAGCAATTTCGGGGAGT+GGG | 0.449915 | 2_4:-40424649 | Msa0328220:CDS |
| ATTAAAGCCTTCTTCGACAA+CGG | 0.451459 | 2_4:-40419414 | Msa0328220:three_prime_UTR |
| TCTCTTCGCAAGGTTCGATC+TGG | 0.454357 | 2_4:+40426452 | None:intergenic |
| TGATCTCCGTTATGTAGTAC+TGG | 0.455881 | 2_4:-40420455 | Msa0328220:CDS |
| AGGTTTCGGTGGAGAGTTTG+TGG | 0.460242 | 2_4:+40426494 | None:intergenic |
| CTTCTTCGACAACGGACTAC+AGG | 0.461269 | 2_4:-40419406 | Msa0328220:three_prime_UTR |
| GATGTTGGACTATGCATCTC+AGG | 0.462658 | 2_4:+40419871 | None:intergenic |
| TTTAGCAGAAACAATTCAAA+AGG | 0.464036 | 2_4:-40420996 | Msa0328220:intron |
| TTACCAACCTCTAGTAACTT+AGG | 0.465893 | 2_4:+40419802 | None:intergenic |
| ATGACAAGACAAGCCTCAAA+TGG | 0.465912 | 2_4:+40421028 | None:intergenic |
| ATTCCTGTCAGATTGTTTCT+GGG | 0.469381 | 2_4:-40420407 | Msa0328220:intron |
| CCCTCTGGCATGAAAAGAAA+AGG | 0.470377 | 2_4:+40423375 | None:intergenic |
| TCCGTTATGTAGTACTGGTT+CGG | 0.471117 | 2_4:-40420450 | Msa0328220:CDS |
| GTTCGAGAGGTGAAAGAGAA+AGG | 0.471606 | 2_4:-40425694 | Msa0328220:CDS |
| TTTATCTTGCTTCAGGCACA+TGG | 0.472517 | 2_4:-40420724 | Msa0328220:intron |
| TGTGGAAGAGACGGCGGTGG+AGG | 0.472903 | 2_4:+40426512 | None:intergenic |
| CACAGTGGGTGGTATTAAAC+TGG | 0.473738 | 2_4:+40422750 | None:intergenic |
| CAGATTACAATTGACTAACC+TGG | 0.478061 | 2_4:+40419463 | None:intergenic |
| ATTGAACCAAGCAGTAAGTC+TGG | 0.478752 | 2_4:+40422925 | None:intergenic |
| ATCTCTTGCAGTTAAATGGT+TGG | 0.478877 | 2_4:-40419956 | Msa0328220:intron |
| TCACAAGCAATTTCGGGGAG+TGG | 0.481347 | 2_4:-40424650 | Msa0328220:CDS |
| TATGACATGGATACCGTTGT+TGG | 0.485794 | 2_4:-40419558 | Msa0328220:CDS |
| TGGATATACATGCAAGAGTA+AGG | 0.489710 | 2_4:-40419936 | Msa0328220:CDS |
| CTGTAGTCCGTTGTCGAAGA+AGG | 0.490502 | 2_4:+40419407 | None:intergenic |
| TATAATATGGACCTGCGTAC+AGG | 0.490503 | 2_4:-40421110 | Msa0328220:CDS |
| CAACCTCTAGTAACTTAGGT+TGG | 0.493695 | 2_4:+40419806 | None:intergenic |
| CCGTAAATTGCCCTTGATGT+TGG | 0.495083 | 2_4:+40419856 | None:intergenic |
| TATGATTCGATCGGTGTTTG+AGG | 0.499225 | 2_4:-40419911 | Msa0328220:CDS |
| CGATATTCCTGGTCCTCTTG+GGG | 0.503309 | 2_4:-40423982 | Msa0328220:CDS |
| GAAATGCTCGCCGCCGTCGA+AGG | 0.504521 | 2_4:+40426474 | None:intergenic |
| GAACATTCGTGGAAATCCAT+TGG | 0.506538 | 2_4:-40424196 | Msa0328220:CDS |
| GAGTAGAATTCCGTGAACTT+TGG | 0.507996 | 2_4:+40426558 | None:intergenic |
| AGAAGTATTCGCCCACATGA+TGG | 0.518087 | 2_4:-40422712 | Msa0328220:CDS |
| AGGCACATGGATCTCCTCAA+TGG | 0.518425 | 2_4:-40420711 | Msa0328220:CDS |
| TTGGACCAGTTTCCATGAGT+CGG | 0.519542 | 2_4:+40420530 | None:intergenic |
| TCCATGAGTCGGATTATGGC+TGG | 0.520674 | 2_4:+40420541 | None:intergenic |
| TGATGATGTTTCGGGAGAGA+AGG | 0.520808 | 2_4:-40425746 | Msa0328220:CDS |
| ATCAAATTTAAGCATCTCAA+AGG | 0.523069 | 2_4:-40424868 | Msa0328220:CDS |
| CTCATGCGATTCTCTTCGCA+AGG | 0.523435 | 2_4:+40426442 | None:intergenic |
| GAAAGGGATGGCAAACAAAT+GGG | 0.527047 | 2_4:+40424225 | None:intergenic |
| TGAGTTTCAAGATTATAAGT+AGG | 0.529055 | 2_4:+40420682 | None:intergenic |
| CCCATCCTCTCTGCTAATCC+CGG | 0.529775 | 2_4:+40425829 | None:intergenic |
| CCTTTCCAAACATTCCGTGT+TGG | 0.533360 | 2_4:+40423004 | None:intergenic |
| TACAGTAGTATCAATAGTGC+GGG | 0.533708 | 2_4:+40420576 | None:intergenic |
| GCCGATGCTAGATTGCCCTC+TGG | 0.535309 | 2_4:+40423360 | None:intergenic |
| TTAAGCATCTCAAAGGACTC+TGG | 0.537705 | 2_4:-40424861 | Msa0328220:CDS |
| ACCTTTGGATCTTAAAACCC+TGG | 0.538572 | 2_4:-40420606 | Msa0328220:CDS |
| GAAGTATTCGCCCACATGAT+GGG | 0.539104 | 2_4:-40422711 | Msa0328220:CDS |
| TGTAGAAATGTTGGAGAGTG+AGG | 0.539327 | 2_4:-40425716 | Msa0328220:CDS |
| AGTTAGACGAAACCTCTGTA+TGG | 0.539543 | 2_4:-40423749 | Msa0328220:intron |
| CACGAATGTTCAAGTACGAA+AGG | 0.541790 | 2_4:+40424208 | None:intergenic |
| TCCGGGATTAGCAGAGAGGA+TGG | 0.541813 | 2_4:-40425830 | Msa0328220:CDS |
| GAACAACCTGCTTTATTCCA+GGG | 0.542789 | 2_4:-40420487 | Msa0328220:CDS |
| TTACTGACCGGGAATCTAGC+AGG | 0.542860 | 2_4:+40425598 | None:intergenic |
| GGATAATTCTAGGTACGTGA+TGG | 0.545152 | 2_4:-40423451 | Msa0328220:intron |
| AGAAGAAGAAATGGTAGCAA+TGG | 0.546649 | 2_4:-40426620 | None:intergenic |
| CAGCTTGATCAGCATTAGAT+GGG | 0.548839 | 2_4:+40424589 | None:intergenic |
| TGCAAGCTCGTGTACAATCA+GGG | 0.549178 | 2_4:+40419583 | None:intergenic |
| GCATCCAAAATATTGGAAAG+TGG | 0.551382 | 2_4:-40423900 | Msa0328220:CDS |
| GTTTGTGGAAGAGACGGCGG+TGG | 0.553090 | 2_4:+40426509 | None:intergenic |
| CGTAAAGGACGCCCATCATG+TGG | 0.553316 | 2_4:+40422700 | None:intergenic |
| GTTGGAGAGTGAGGTTCGAG+AGG | 0.553772 | 2_4:-40425707 | Msa0328220:CDS |
| ATGGATACCGTTGTTGGAGA+AGG | 0.554146 | 2_4:-40419552 | Msa0328220:CDS |
| ATATCTGTGTATACCCGTAA+AGG | 0.555996 | 2_4:+40422685 | None:intergenic |
| AACTTTGGCGAAGTCTTCGA+AGG | 0.557163 | 2_4:+40426573 | None:intergenic |
| GTTCTGCCAGACTTACTGCT+TGG | 0.561878 | 2_4:-40422931 | Msa0328220:CDS |
| GATCTTAAAACCCTGGAACA+TGG | 0.564811 | 2_4:-40420599 | Msa0328220:CDS |
| CTTACCAATTCTGAAGAACT+GGG | 0.565554 | 2_4:+40424827 | None:intergenic |
| ATCGGTGTTTGAGGCAGCTG+CGG | 0.566183 | 2_4:-40419902 | Msa0328220:CDS |
| TGACGGTACATTGAGATGGT+TGG | 0.567506 | 2_4:-40425671 | Msa0328220:CDS |
| TCCACCGAAACCTTCGACGG+CGG | 0.568274 | 2_4:-40426484 | Msa0328220:CDS |
| ACCAGCCATAATCCGACTCA+TGG | 0.571309 | 2_4:-40420542 | Msa0328220:CDS |
| ATACCCAGAAACAATCTGAC+AGG | 0.581860 | 2_4:+40420404 | None:intergenic |
| AGATGCATAGTCCAACATCA+AGG | 0.583143 | 2_4:-40419867 | Msa0328220:CDS |
| ACGAATGTTCAAGTACGAAA+GGG | 0.584367 | 2_4:+40424209 | None:intergenic |
| GTGGAAGAGACGGCGGTGGA+GGG | 0.585364 | 2_4:+40426513 | None:intergenic |
| GGTTGATGAGGAGTTGAAGA+AGG | 0.587491 | 2_4:-40421089 | Msa0328220:CDS |
| AACAACCTGCTTTATTCCAG+GGG | 0.587507 | 2_4:-40420486 | Msa0328220:CDS |
| TTTCCAACCTAAGTTACTAG+AGG | 0.588700 | 2_4:-40419809 | Msa0328220:intron |
| GAGGAGTTGAAGAAGGCCAC+GGG | 0.591379 | 2_4:-40421082 | Msa0328220:CDS |
| TTGCGCAGAGATATATGGAA+AGG | 0.594711 | 2_4:-40424616 | Msa0328220:CDS |
| AGATTACAATTGACTAACCT+GGG | 0.596554 | 2_4:+40419464 | None:intergenic |
| GCCGCCGTCGAAGGTTTCGG+TGG | 0.597756 | 2_4:+40426483 | None:intergenic |
| GCCAGAGGGCAATCTAGCAT+CGG | 0.598031 | 2_4:-40423361 | Msa0328220:CDS |
| TGAGGAGTTGAAGAAGGCCA+CGG | 0.599213 | 2_4:-40421083 | Msa0328220:CDS |
| GGAGAAGGAGGTATTGCCAA+AGG | 0.601959 | 2_4:-40419537 | Msa0328220:CDS |
| AATACCTCCTTCTCCAACAA+CGG | 0.603511 | 2_4:+40419545 | None:intergenic |
| TTGCTGATCTGTTATTCCCG+TGG | 0.606174 | 2_4:+40421066 | None:intergenic |
| CACTTACTGATTGCAAACTC+AGG | 0.606354 | 2_4:+40422634 | None:intergenic |
| CCGGGATTAGCAGAGAGGAT+GGG | 0.606835 | 2_4:-40425829 | Msa0328220:CDS |
| AACTTTCACAAGCAATTTCG+GGG | 0.606957 | 2_4:-40424655 | Msa0328220:CDS |
| TTTCTATTCTATGGCCAACA+CGG | 0.607111 | 2_4:-40423018 | Msa0328220:CDS |
| ATAGTGCGGGCCATGTTCCA+GGG | 0.608612 | 2_4:+40420589 | None:intergenic |
| CTGACAGGAATATCTCCAAA+GGG | 0.611128 | 2_4:+40420419 | None:intergenic |
| TCTGACAGGAATATCTCCAA+AGG | 0.611646 | 2_4:+40420418 | None:intergenic |
| GGAGTCCATTCAGGAAGGCG+AGG | 0.613302 | 2_4:+40423849 | None:intergenic |
| TGGAGAGTTTGTGGAAGAGA+CGG | 0.613450 | 2_4:+40426503 | None:intergenic |
| GATAGTGAAACTGAGGTGAA+TGG | 0.613747 | 2_4:-40425778 | Msa0328220:CDS |
| AGTAAGGACTATGATTCGAT+CGG | 0.623174 | 2_4:-40419920 | Msa0328220:CDS |
| GCTCTCAGAGGACTGCACAG+TGG | 0.626388 | 2_4:+40422735 | None:intergenic |
| CATTCACAATCTGATCAACA+AGG | 0.628020 | 2_4:-40424520 | Msa0328220:intron |
| GATGGGTTCTTTGATGTGTG+TGG | 0.629001 | 2_4:-40425812 | Msa0328220:CDS |
| GATACCGTTGTTGGAGAAGG+AGG | 0.629194 | 2_4:-40419549 | Msa0328220:CDS |
| GATGCATAGTCCAACATCAA+GGG | 0.630418 | 2_4:-40419866 | Msa0328220:CDS |
| TATTATGTACGCAAAAGAGA+AGG | 0.632002 | 2_4:-40420637 | Msa0328220:CDS |
| CTCCTCATCAACCTGTACGC+AGG | 0.634177 | 2_4:+40421099 | None:intergenic |
| TCCGAACCAGTACTACATAA+CGG | 0.635574 | 2_4:+40420449 | None:intergenic |
| CCAACACGGAATGTTTGGAA+AGG | 0.635916 | 2_4:-40423004 | Msa0328220:CDS |
| ATGTTCAAGTACGAAAGGGA+TGG | 0.635997 | 2_4:+40424213 | None:intergenic |
| GCATGTTCTCAGAATTATCG+TGG | 0.636330 | 2_4:-40420137 | Msa0328220:intron |
| TCAGAGGACTGCACAGTGGG+TGG | 0.639769 | 2_4:+40422739 | None:intergenic |
| AAGGTGACGGTACATTGAGA+TGG | 0.641533 | 2_4:-40425675 | Msa0328220:CDS |
| GTCAAGTACTCTTCCACGTG+AGG | 0.644264 | 2_4:+40422661 | None:intergenic |
| AGTGGGTGGTATTAAACTGG+TGG | 0.645039 | 2_4:+40422753 | None:intergenic |
| GACCTGCGTACAGGTTGATG+AGG | 0.645215 | 2_4:-40421101 | Msa0328220:CDS |
| AGATTAGATACACTCAGCAG+TGG | 0.646587 | 2_4:+40424561 | None:intergenic |
| TCTCAGCAGCTCTAACAAGT+CGG | 0.647266 | 2_4:+40424158 | None:intergenic |
| TTACAGTAGTATCAATAGTG+CGG | 0.648290 | 2_4:+40420575 | None:intergenic |
| GCAATCTAGCATCGGCTGTG+AGG | 0.649411 | 2_4:-40423353 | Msa0328220:intron |
| GAATTTGAGGAAGAACATCA+AGG | 0.650482 | 2_4:-40420077 | Msa0328220:intron |
| ACGAGCTTGCAAATATGACA+TGG | 0.651494 | 2_4:-40419571 | Msa0328220:CDS |
| CATCAGGAGTCCATTCAGGA+AGG | 0.654679 | 2_4:+40423844 | None:intergenic |
| CTCTCCACCGAAACCTTCGA+CGG | 0.658578 | 2_4:-40426487 | Msa0328220:CDS |
| GATATTCCTGGTCCTCTTGG+GGG | 0.661353 | 2_4:-40423981 | Msa0328220:CDS |
| GAGGTGAAAGAGAAAGGTGA+CGG | 0.664017 | 2_4:-40425688 | Msa0328220:CDS |
| TGATTTGGATAGTGAAACTG+AGG | 0.668818 | 2_4:-40425785 | Msa0328220:CDS |
| GGATTCCGGTAAACCCGAAG+CGG | 0.670174 | 2_4:+40426534 | None:intergenic |
| TAAGTAGGCTGCAACCATTG+AGG | 0.676253 | 2_4:+40420697 | None:intergenic |
| TGATGAGCCAAACTTTAGAG+TGG | 0.680214 | 2_4:-40423400 | Msa0328220:CDS |
| ATACACAGATATACCTCACG+TGG | 0.685643 | 2_4:-40422674 | Msa0328220:CDS |
| GTAAAGGACGCCCATCATGT+GGG | 0.688444 | 2_4:+40422701 | None:intergenic |
| AAGTTCCGGGATTAGCAGAG+AGG | 0.689466 | 2_4:-40425834 | Msa0328220:CDS |
| GCGAATACTTCTGCTCTCAG+AGG | 0.689727 | 2_4:+40422723 | None:intergenic |
| GAAAGAAAATTACAGCACGC+AGG | 0.698704 | 2_4:+40419322 | None:intergenic |
| ATGAATGTCATACCATACAG+AGG | 0.704504 | 2_4:+40423737 | None:intergenic |
| TTGGATAAAATAGTTCTCTG+GGG | 0.706460 | 2_4:+40422901 | None:intergenic |
| TTTGGCTGGATAACAAACAG+CGG | 0.712994 | 2_4:-40419249 | Msa0328220:three_prime_UTR |
| AGAGTTTGTGGAAGAGACGG+CGG | 0.716886 | 2_4:+40426506 | None:intergenic |
| TAGAATCCGAAGTCAAAACG+AGG | 0.732532 | 2_4:+40426416 | None:intergenic |
| ACCGTATTATAAGTGCAATG+TGG | 0.733685 | 2_4:-40423809 | Msa0328220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAGTTATAATTTCTAT+AGG | - | chr2_4:40420310-40420329 | Msa0328220:intron | 10.0% |
| !! | CAAAATTAAATAAATAACAA+AGG | + | chr2_4:40421785-40421804 | None:intergenic | 10.0% |
| !! | ATATAAAAAAATTCGATTAT+AGG | - | chr2_4:40422615-40422634 | Msa0328220:intron | 10.0% |
| !!! | CTAATTATTTTATTATTTTC+AGG | - | chr2_4:40423041-40423060 | Msa0328220:intron | 10.0% |
| !!! | TTTTAAATAATGAATCATTT+TGG | - | chr2_4:40425090-40425109 | Msa0328220:intron | 10.0% |
| !!! | TTTAAATAATGAATCATTTT+GGG | - | chr2_4:40425091-40425110 | Msa0328220:intron | 10.0% |
| !! | ATATTAAGTGGTTAAATATA+AGG | - | chr2_4:40419782-40419801 | Msa0328220:intron | 15.0% |
| !! | ATGAACAAAATAAAAAAAAC+AGG | + | chr2_4:40420283-40420302 | None:intergenic | 15.0% |
| !! | TCACAATTGTAAATTAAATA+AGG | + | chr2_4:40420592-40420611 | None:intergenic | 15.0% |
| !! | AATACATGTAATTCATAAAA+AGG | + | chr2_4:40422735-40422754 | None:intergenic | 15.0% |
| !!! | TATGAATTACATGTATTTTA+TGG | - | chr2_4:40422738-40422757 | Msa0328220:CDS | 15.0% |
| !!! | TTAAATAATGAATCATTTTG+GGG | - | chr2_4:40425092-40425111 | Msa0328220:intron | 15.0% |
| !!! | TGAATTTTATGTTTTATTTC+AGG | - | chr2_4:40425526-40425545 | Msa0328220:intron | 15.0% |
| !! | TTAAAACTTGATAAGAAAAA+GGG | + | chr2_4:40425676-40425695 | None:intergenic | 15.0% |
| !! | AATAAATCACAAGAATATTA+AGG | - | chr2_4:40425736-40425755 | Msa0328220:CDS | 15.0% |
| !!! | TAAAAAATTTTGGTATTGAA+AGG | + | chr2_4:40426098-40426117 | None:intergenic | 15.0% |
| !!! | TAAATATTTTTTAGCAAGTT+TGG | - | chr2_4:40426572-40426591 | Msa0328220:CDS | 15.0% |
| !! | ATCTTGAAAATAAGCTAAAA+AGG | + | chr2_4:40419609-40419628 | None:intergenic | 20.0% |
| !! | TAACCACTTAATATCAATTT+AGG | + | chr2_4:40419776-40419795 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTTTTGCTTTTG+TGG | - | chr2_4:40419974-40419993 | Msa0328220:intron | 20.0% |
| !!! | AAAAGTGAGTCTTATAATAA+CGG | + | chr2_4:40420467-40420486 | None:intergenic | 20.0% |
| !! | ATTTCCTTGTTCTTTAATAT+TGG | - | chr2_4:40420518-40420537 | Msa0328220:CDS | 20.0% |
| !! | ATAATTGTGAGGATATTTAT+AGG | - | chr2_4:40420646-40420665 | Msa0328220:CDS | 20.0% |
| !! | CAGTATTATTTAATTATCGT+CGG | - | chr2_4:40420761-40420780 | Msa0328220:intron | 20.0% |
| !! | TAGAAAATAAGCATAACAAA+AGG | + | chr2_4:40421358-40421377 | None:intergenic | 20.0% |
| !!! | ATGCTTATTTTCTATCTTAT+TGG | - | chr2_4:40421364-40421383 | Msa0328220:intron | 20.0% |
| !!! | CTAAAAAGATTTTAAACACA+TGG | - | chr2_4:40421512-40421531 | Msa0328220:intron | 20.0% |
| !! | ATAAATAACAAAGGCAATTT+GGG | + | chr2_4:40421776-40421795 | None:intergenic | 20.0% |
| !! | AATAAATAACAAAGGCAATT+TGG | + | chr2_4:40421777-40421796 | None:intergenic | 20.0% |
| !!! | TTTTACTTGTTTTACTTTCT+TGG | - | chr2_4:40422132-40422151 | Msa0328220:intron | 20.0% |
| !! | TATGAAACATATGATCAATT+TGG | - | chr2_4:40422333-40422352 | Msa0328220:intron | 20.0% |
| !!! | TGTTAGTTTTCTTTATTGTT+GGG | + | chr2_4:40422364-40422383 | None:intergenic | 20.0% |
| !!! | ATGTTAGTTTTCTTTATTGT+TGG | + | chr2_4:40422365-40422384 | None:intergenic | 20.0% |
| !! | TTAGTAATAGAAGAATTACT+TGG | + | chr2_4:40422968-40422987 | None:intergenic | 20.0% |
| !! | AAGTAATTCTTCTATTACTA+AGG | - | chr2_4:40422967-40422986 | Msa0328220:CDS | 20.0% |
| !!! | TTATTGATAACAGAAAGAAA+AGG | - | chr2_4:40423407-40423426 | Msa0328220:CDS | 20.0% |
| !!! | TATTGATAACAGAAAGAAAA+GGG | - | chr2_4:40423408-40423427 | Msa0328220:CDS | 20.0% |
| !! | TCTGAACTTTATTAAGAAAT+TGG | + | chr2_4:40423456-40423475 | None:intergenic | 20.0% |
| !! | AACTTTATTAACAAATTGAC+TGG | + | chr2_4:40423529-40423548 | None:intergenic | 20.0% |
| !!! | TTATTGGTTTAAATCATTGT+GGG | - | chr2_4:40423888-40423907 | Msa0328220:CDS | 20.0% |
| !!! | TCTATACTTTGGAAATATAA+TGG | - | chr2_4:40423911-40423930 | Msa0328220:CDS | 20.0% |
| !! | AAACAAGGAAAATTCAATTT+AGG | + | chr2_4:40424545-40424564 | None:intergenic | 20.0% |
| !!! | ATATTATATCTGCATCTTTT+GGG | + | chr2_4:40424725-40424744 | None:intergenic | 20.0% |
| !! | TTTATTCTTATGCTCTTAAA+AGG | - | chr2_4:40425486-40425505 | Msa0328220:intron | 20.0% |
| !!! | TTTATGTTTTATTTCAGGTT+AGG | - | chr2_4:40425531-40425550 | Msa0328220:intron | 20.0% |
| !! | GTTAAAACTTGATAAGAAAA+AGG | + | chr2_4:40425677-40425696 | None:intergenic | 20.0% |
| !! | AAAAATTCATCTATAGAATG+TGG | + | chr2_4:40425808-40425827 | None:intergenic | 20.0% |
| !!! | TTCTATAGATGAATTTTTAG+AGG | - | chr2_4:40425810-40425829 | Msa0328220:CDS | 20.0% |
| !! | TCAAAATATATAATATGCTC+TGG | + | chr2_4:40425839-40425858 | None:intergenic | 20.0% |
| !!! | CAGGTCAATATAAAAAATTT+TGG | + | chr2_4:40426108-40426127 | None:intergenic | 20.0% |
| ! | AAATATAAGGACATGATTGA+TGG | - | chr2_4:40419795-40419814 | Msa0328220:intron | 25.0% |
| ! | TGGTAAGTTGTTAAAATGTT+TGG | - | chr2_4:40419815-40419834 | Msa0328220:CDS | 25.0% |
| ! | GGTAAGTTGTTAAAATGTTT+GGG | - | chr2_4:40419816-40419835 | Msa0328220:CDS | 25.0% |
| ! | ATAGTAAGTGGTTAAATACA+GGG | - | chr2_4:40419848-40419867 | Msa0328220:CDS | 25.0% |
| !! | CTCACTAATTTTCTATAACT+AGG | - | chr2_4:40419919-40419938 | Msa0328220:CDS | 25.0% |
| ! | TGATATGAATTGAATTTGAG+TGG | - | chr2_4:40420411-40420430 | Msa0328220:CDS | 25.0% |
| ! | TTACAACATCAATAATTGTG+AGG | - | chr2_4:40420635-40420654 | Msa0328220:CDS | 25.0% |
| ! | ATTTGACAGGTTTATTGTTA+TGG | - | chr2_4:40420680-40420699 | Msa0328220:CDS | 25.0% |
| ! | AAGAAACGTGAAACTAAAAT+TGG | + | chr2_4:40420838-40420857 | None:intergenic | 25.0% |
| ! | ACTTCTTGAATAATCAATTC+AGG | + | chr2_4:40420958-40420977 | None:intergenic | 25.0% |
| ! | ATCAAATTTAAGCATCTCAA+AGG | - | chr2_4:40420979-40420998 | Msa0328220:intron | 25.0% |
| !! | TTAAACCACATATTCCTTTT+TGG | - | chr2_4:40421066-40421085 | Msa0328220:CDS | 25.0% |
| ! | AATTACTTTACTTCTAGTGA+TGG | - | chr2_4:40421115-40421134 | Msa0328220:CDS | 25.0% |
| ! | AAAACATACATATATGGGAT+TGG | + | chr2_4:40421557-40421576 | None:intergenic | 25.0% |
| ! | CGATCAAAACATACATATAT+GGG | + | chr2_4:40421562-40421581 | None:intergenic | 25.0% |
| ! | TCGATCAAAACATACATATA+TGG | + | chr2_4:40421563-40421582 | None:intergenic | 25.0% |
| ! | TAAATAACAAAGGCAATTTG+GGG | + | chr2_4:40421775-40421794 | None:intergenic | 25.0% |
| ! | TATTTGTGCATCCAAAATAT+TGG | - | chr2_4:40421940-40421959 | Msa0328220:intron | 25.0% |
| ! | TGAAATACACAATTTCATCA+AGG | - | chr2_4:40422224-40422243 | Msa0328220:intron | 25.0% |
| ! | TGTTTAACCATTCAAATTGT+TGG | - | chr2_4:40422298-40422317 | Msa0328220:intron | 25.0% |
| ! | GTTTAACCATTCAAATTGTT+GGG | - | chr2_4:40422299-40422318 | Msa0328220:intron | 25.0% |
| ! | CTAGAATTATCCAAAACAAT+GGG | + | chr2_4:40422388-40422407 | None:intergenic | 25.0% |
| ! | CATGTAATTCATAAAAAGGA+TGG | + | chr2_4:40422731-40422750 | None:intergenic | 25.0% |
| ! | TAACAAAAAGGAACAAAAGT+TGG | + | chr2_4:40423322-40423341 | None:intergenic | 25.0% |
| !! | AACTTTTGTTCCTTTTTGTT+AGG | - | chr2_4:40423321-40423340 | Msa0328220:intron | 25.0% |
| ! | TCTGTTATCAATAAACCTTT+CGG | + | chr2_4:40423401-40423420 | None:intergenic | 25.0% |
| !! | ATTAAGAAATTGGCTTATTC+CGG | + | chr2_4:40423446-40423465 | None:intergenic | 25.0% |
| !!! | AAAAGTGTTAGACATATCAA+AGG | + | chr2_4:40423712-40423731 | None:intergenic | 25.0% |
| !!! | CTTATTGGTTTAAATCATTG+TGG | - | chr2_4:40423887-40423906 | Msa0328220:CDS | 25.0% |
| !!! | GAAGTTAATTAGTTTTGAGT+GGG | + | chr2_4:40424316-40424335 | None:intergenic | 25.0% |
| !! | TGTTTTTCATAAAATTCCCA+TGG | - | chr2_4:40424606-40424625 | Msa0328220:CDS | 25.0% |
| ! | TCATTGAATCAAATATCCAT+GGG | + | chr2_4:40424625-40424644 | None:intergenic | 25.0% |
| ! | ATCATTGAATCAAATATCCA+TGG | + | chr2_4:40424626-40424645 | None:intergenic | 25.0% |
| !! | CATATTATATCTGCATCTTT+TGG | + | chr2_4:40424726-40424745 | None:intergenic | 25.0% |
| ! | CAAAAGATGCAGATATAATA+TGG | - | chr2_4:40424724-40424743 | Msa0328220:intron | 25.0% |
| ! | CATTAATCAATTTCCATTTG+AGG | - | chr2_4:40424806-40424825 | Msa0328220:intron | 25.0% |
| ! | TTTAGCAGAAACAATTCAAA+AGG | - | chr2_4:40424851-40424870 | Msa0328220:CDS | 25.0% |
| ! | TAGAAATGCATAATGAAAAC+AGG | + | chr2_4:40424937-40424956 | None:intergenic | 25.0% |
| ! | ATATTTCTCTGAATGTATGA+TGG | + | chr2_4:40424968-40424987 | None:intergenic | 25.0% |
| ! | TTACAAATGAATTGAAGTGT+TGG | - | chr2_4:40425051-40425070 | Msa0328220:intron | 25.0% |
| ! | TGAGTTTCAAGATTATAAGT+AGG | + | chr2_4:40425168-40425187 | None:intergenic | 25.0% |
| !! | ATATACTTCTGGCATATTTT+TGG | + | chr2_4:40425339-40425358 | None:intergenic | 25.0% |
| ! | CTTAAAAGGTTAAACTCTAA+TGG | - | chr2_4:40425500-40425519 | Msa0328220:intron | 25.0% |
| !! | ATACTCAAAAAGACTACTTT+TGG | + | chr2_4:40425582-40425601 | None:intergenic | 25.0% |
| !! | AGAATATTAAGGATTTTGTG+AGG | - | chr2_4:40425747-40425766 | Msa0328220:CDS | 25.0% |
| !! | GAATATTAAGGATTTTGTGA+GGG | - | chr2_4:40425748-40425767 | Msa0328220:CDS | 25.0% |
| ! | TAATGCTGAATTATCTGATT+AGG | - | chr2_4:40426172-40426191 | Msa0328220:intron | 25.0% |
| !!! | TGACTTGTATTTTATATTGC+AGG | - | chr2_4:40426231-40426250 | Msa0328220:intron | 25.0% |
| ! | AAGTTATACATCTAATTTCC+AGG | + | chr2_4:40426481-40426500 | None:intergenic | 25.0% |
| !! | TTTTAGCAAGTTTGGTTATT+TGG | - | chr2_4:40426580-40426599 | Msa0328220:CDS | 25.0% |
| ATATCAATTTAGGCTCGATT+TGG | + | chr2_4:40419766-40419785 | None:intergenic | 30.0% | |
| GAGCCTAAATTGATATTAAG+TGG | - | chr2_4:40419770-40419789 | Msa0328220:intron | 30.0% | |
| GATAGTAAGTGGTTAAATAC+AGG | - | chr2_4:40419847-40419866 | Msa0328220:CDS | 30.0% | |
| AAATAGTCCCTAACTTTGTA+GGG | + | chr2_4:40419889-40419908 | None:intergenic | 30.0% | |
| AAAATAGTCCCTAACTTTGT+AGG | + | chr2_4:40419890-40419909 | None:intergenic | 30.0% | |
| ! | TACAAAGTTAGGGACTATTT+TGG | - | chr2_4:40419889-40419908 | Msa0328220:CDS | 30.0% |
| !! | TGTTGATGATGATGATGTTT+CGG | - | chr2_4:40420092-40420111 | Msa0328220:CDS | 30.0% |
| TGATGATATGTTTCTCTCAT+TGG | - | chr2_4:40420221-40420240 | Msa0328220:intron | 30.0% | |
| AAATCATGCTCATCAAACTT+AGG | - | chr2_4:40420376-40420395 | Msa0328220:intron | 30.0% | |
| !! | AGTCTTATAATAACGGATGA+AGG | + | chr2_4:40420460-40420479 | None:intergenic | 30.0% |
| GAGTCCAATATTAAAGAACA+AGG | + | chr2_4:40420525-40420544 | None:intergenic | 30.0% | |
| ACTCGCTTACAAAATTTACT+CGG | + | chr2_4:40420721-40420740 | None:intergenic | 30.0% | |
| ! | ACTAAATTCTGAAAGGGAAA+GGG | + | chr2_4:40420901-40420920 | None:intergenic | 30.0% |
| ! | TTGTAAGCTTGTTTCCATAT+AGG | + | chr2_4:40420933-40420952 | None:intergenic | 30.0% |
| ACTTACCAAAAAGGAATATG+TGG | + | chr2_4:40421074-40421093 | None:intergenic | 30.0% | |
| TCTTGCAGGTATTATTCTTA+AGG | - | chr2_4:40421141-40421160 | Msa0328220:intron | 30.0% | |
| GAATTATAAATCTCCAGTTC+TGG | + | chr2_4:40421172-40421191 | None:intergenic | 30.0% | |
| TCAACTTTCACAAGCAATTT+CGG | - | chr2_4:40421190-40421209 | Msa0328220:intron | 30.0% | |
| TATGCTCAAGAGATACAAAA+TGG | - | chr2_4:40421472-40421491 | Msa0328220:intron | 30.0% | |
| TGGGATTGGAAAAAATGAAT+TGG | + | chr2_4:40421543-40421562 | None:intergenic | 30.0% | |
| ! | AATTTTGTATGTCCATTCTC+TGG | - | chr2_4:40421798-40421817 | Msa0328220:intron | 30.0% |
| ! | AAATTTGCTCAAATTCCCAA+AGG | + | chr2_4:40421839-40421858 | None:intergenic | 30.0% |
| ! | GGGAATTTGAGCAAATTTTT+AGG | - | chr2_4:40421841-40421860 | Msa0328220:intron | 30.0% |
| !!! | AATTTTTAGGTCGATATTCC+TGG | - | chr2_4:40421854-40421873 | Msa0328220:intron | 30.0% |
| AAGAGATTCCAGAATTTCAA+TGG | + | chr2_4:40421897-40421916 | None:intergenic | 30.0% | |
| ! | CCATTTAGTTCAGAAATGTT+TGG | + | chr2_4:40421920-40421939 | None:intergenic | 30.0% |
| CCAAACATTTCTGAACTAAA+TGG | - | chr2_4:40421917-40421936 | Msa0328220:intron | 30.0% | |
| ! | CTTTCCACTTTCCAATATTT+TGG | + | chr2_4:40421954-40421973 | None:intergenic | 30.0% |
| CTTATAATACGGTCATGAAT+AGG | + | chr2_4:40422031-40422050 | None:intergenic | 30.0% | |
| ! | AAACTAACATCCCATTGTTT+TGG | - | chr2_4:40422375-40422394 | Msa0328220:intron | 30.0% |
| CCTAGAATTATCCAAAACAA+TGG | + | chr2_4:40422389-40422408 | None:intergenic | 30.0% | |
| !!! | CCATTGTTTTGGATAATTCT+AGG | - | chr2_4:40422386-40422405 | Msa0328220:intron | 30.0% |
| GTAATTCATAAAAAGGATGG+AGG | + | chr2_4:40422728-40422747 | None:intergenic | 30.0% | |
| AGAATTATCACAAATCCAGA+GGG | + | chr2_4:40422768-40422787 | None:intergenic | 30.0% | |
| TAGAATTATCACAAATCCAG+AGG | + | chr2_4:40422769-40422788 | None:intergenic | 30.0% | |
| ATAGAAAAGCTGTGAAAAGT+GGG | + | chr2_4:40422816-40422835 | None:intergenic | 30.0% | |
| AATAGAAAAGCTGTGAAAAG+TGG | + | chr2_4:40422817-40422836 | None:intergenic | 30.0% | |
| ! | TTCACAGCTTTTCTATTCTA+TGG | - | chr2_4:40422820-40422839 | Msa0328220:intron | 30.0% |
| TTGGATAAAATAGTTCTCTG+GGG | + | chr2_4:40422949-40422968 | None:intergenic | 30.0% | |
| CTTGGATAAAATAGTTCTCT+GGG | + | chr2_4:40422950-40422969 | None:intergenic | 30.0% | |
| ACTTGGATAAAATAGTTCTC+TGG | + | chr2_4:40422951-40422970 | None:intergenic | 30.0% | |
| TTCAAAGCAACCTAACAAAA+AGG | + | chr2_4:40423334-40423353 | None:intergenic | 30.0% | |
| !! | TTGTTAGGTTGCTTTGAAAA+AGG | - | chr2_4:40423336-40423355 | Msa0328220:intron | 30.0% |
| TTCGGTTATCAATAAACTCA+GGG | + | chr2_4:40423383-40423402 | None:intergenic | 30.0% | |
| TTTCGGTTATCAATAAACTC+AGG | + | chr2_4:40423384-40423403 | None:intergenic | 30.0% | |
| ! | TGAGTTTATTGATAACCGAA+AGG | - | chr2_4:40423383-40423402 | Msa0328220:CDS | 30.0% |
| GAATCTATAAATAGCTTCTC+CGG | + | chr2_4:40423495-40423514 | None:intergenic | 30.0% | |
| ! | AAAGGATTGACTCCAAATAT+AGG | + | chr2_4:40423694-40423713 | None:intergenic | 30.0% |
| TCTAATACTCACTCTCTTAT+TGG | - | chr2_4:40423872-40423891 | Msa0328220:CDS | 30.0% | |
| AAATTCAAGAAGATTTGCAG+AGG | + | chr2_4:40424073-40424092 | None:intergenic | 30.0% | |
| !! | ATAGGTACTGGTTCAATATA+TGG | - | chr2_4:40424150-40424169 | Msa0328220:CDS | 30.0% |
| ! | AATATATGGAGGCATACAAA+TGG | - | chr2_4:40424164-40424183 | Msa0328220:CDS | 30.0% |
| !!! | GGAAGTTAATTAGTTTTGAG+TGG | + | chr2_4:40424317-40424336 | None:intergenic | 30.0% |
| TTAGTTAGGCTGTTTAATAG+AGG | + | chr2_4:40424353-40424372 | None:intergenic | 30.0% | |
| GTTAGAGTGGTTAATTAGTT+AGG | + | chr2_4:40424367-40424386 | None:intergenic | 30.0% | |
| TGATGTAAGCTTTCCTAATT+GGG | - | chr2_4:40424437-40424456 | Msa0328220:intron | 30.0% | |
| !!! | ATAATGAATCATTTTGGGGT+TGG | - | chr2_4:40425096-40425115 | Msa0328220:intron | 30.0% |
| !!! | TAATGAATCATTTTGGGGTT+GGG | - | chr2_4:40425097-40425116 | Msa0328220:intron | 30.0% |
| TATTATGTACGCAAAAGAGA+AGG | - | chr2_4:40425210-40425229 | Msa0328220:intron | 30.0% | |
| TTACAGTAGTATCAATAGTG+CGG | + | chr2_4:40425275-40425294 | None:intergenic | 30.0% | |
| AGCTAACAACCAATATTCTT+TGG | - | chr2_4:40425556-40425575 | Msa0328220:intron | 30.0% | |
| ! | TACTTTTGGCCAAAGAATAT+TGG | + | chr2_4:40425568-40425587 | None:intergenic | 30.0% |
| TGAAACTCATTTCACTGTTA+TGG | - | chr2_4:40425601-40425620 | Msa0328220:intron | 30.0% | |
| CATCTTGTTGCTAAACAATA+TGG | + | chr2_4:40425640-40425659 | None:intergenic | 30.0% | |
| TTGTTTAGCAACAAGATGTT+TGG | - | chr2_4:40425642-40425661 | Msa0328220:CDS | 30.0% | |
| ATTCTTGAATCAAGATGTTC+AGG | + | chr2_4:40426127-40426146 | None:intergenic | 30.0% | |
| ATGTAATGCGATAATTCGTA+TGG | + | chr2_4:40426208-40426227 | None:intergenic | 30.0% | |
| ! | CTTTTTGAATGAAATTTCCC+AGG | - | chr2_4:40426366-40426385 | Msa0328220:intron | 30.0% |
| AGATTACAATTGACTAACCT+GGG | + | chr2_4:40426386-40426405 | None:intergenic | 30.0% | |
| ATAACAAACAGCGGTAATAA+TGG | - | chr2_4:40426607-40426626 | Msa0328220:CDS | 30.0% | |
| TGAAGAATGTGAAGAAGGTT+GGG | + | chr2_4:40419530-40419549 | None:intergenic | 35.0% | |
| !! | AAAGTTAGGGACTATTTTGG+TGG | - | chr2_4:40419892-40419911 | Msa0328220:CDS | 35.0% |
| !!! | ATTTTAGTTGCGTGAAGTTC+CGG | - | chr2_4:40419999-40420018 | Msa0328220:intron | 35.0% |
| ! | GATGTGTGTGGATATTGATT+TGG | - | chr2_4:40420047-40420066 | Msa0328220:intron | 35.0% |
| ! | TGATTTGGATAGTGAAACTG+AGG | - | chr2_4:40420062-40420081 | Msa0328220:intron | 35.0% |
| !! | GTTGATGATGATGATGTTTC+GGG | - | chr2_4:40420093-40420112 | Msa0328220:CDS | 35.0% |
| GGTTAGTGTTGTAGAAATGT+TGG | - | chr2_4:40420122-40420141 | Msa0328220:CDS | 35.0% | |
| ATTGAATTTGAGTGGCAAGA+TGG | - | chr2_4:40420419-40420438 | Msa0328220:CDS | 35.0% | |
| GGAAGTAACACAAATTTGAC+AGG | - | chr2_4:40420667-40420686 | Msa0328220:CDS | 35.0% | |
| ! | CTAAATTCTGAAAGGGAAAG+GGG | + | chr2_4:40420900-40420919 | None:intergenic | 35.0% |
| ! | CACTAAATTCTGAAAGGGAA+AGG | + | chr2_4:40420902-40420921 | None:intergenic | 35.0% |
| CTTTCCCTTTCAGAATTTAG+TGG | - | chr2_4:40420900-40420919 | Msa0328220:intron | 35.0% | |
| ! | AGTGCCACTAAATTCTGAAA+GGG | + | chr2_4:40420907-40420926 | None:intergenic | 35.0% |
| ! | AAGTGCCACTAAATTCTGAA+AGG | + | chr2_4:40420908-40420927 | None:intergenic | 35.0% |
| ATAACCCAGTTCTTCAGAAT+TGG | - | chr2_4:40421016-40421035 | Msa0328220:CDS | 35.0% | |
| ! | CTTACCAATTCTGAAGAACT+GGG | + | chr2_4:40421023-40421042 | None:intergenic | 35.0% |
| ! | ACTTACCAATTCTGAAGAAC+TGG | + | chr2_4:40421024-40421043 | None:intergenic | 35.0% |
| ACAACAAGGACTTACCAAAA+AGG | + | chr2_4:40421083-40421102 | None:intergenic | 35.0% | |
| !! | TTGGTAAGTCCTTGTTGTTA+AGG | - | chr2_4:40421085-40421104 | Msa0328220:CDS | 35.0% |
| !! | TTTAGCTCTCCTTAACAACA+AGG | + | chr2_4:40421097-40421116 | None:intergenic | 35.0% |
| CAACTTTCACAAGCAATTTC+GGG | - | chr2_4:40421191-40421210 | Msa0328220:intron | 35.0% | |
| AACTTTCACAAGCAATTTCG+GGG | - | chr2_4:40421192-40421211 | Msa0328220:intron | 35.0% | |
| CATTCACAATCTGATCAACA+AGG | - | chr2_4:40421327-40421346 | Msa0328220:intron | 35.0% | |
| !! | ATTTTGACGATTCCCTCATT+TGG | - | chr2_4:40421586-40421605 | Msa0328220:intron | 35.0% |
| GAAAAGTCCTAACCAAATGA+GGG | + | chr2_4:40421601-40421620 | None:intergenic | 35.0% | |
| TGAAAAGTCCTAACCAAATG+AGG | + | chr2_4:40421602-40421621 | None:intergenic | 35.0% | |
| ACGAATGTTCAAGTACGAAA+GGG | + | chr2_4:40421641-40421660 | None:intergenic | 35.0% | |
| ATTCTCTTGCTTACGTTCAT+TGG | - | chr2_4:40421714-40421733 | Msa0328220:intron | 35.0% | |
| GCATCCAAAATATTGGAAAG+TGG | - | chr2_4:40421947-40421966 | Msa0328220:intron | 35.0% | |
| ACCGTATTATAAGTGCAATG+TGG | - | chr2_4:40422038-40422057 | Msa0328220:intron | 35.0% | |
| GCCACATTGCACTTATAATA+CGG | + | chr2_4:40422042-40422061 | None:intergenic | 35.0% | |
| ATGAATGTCATACCATACAG+AGG | + | chr2_4:40422113-40422132 | None:intergenic | 35.0% | |
| TACTGACCCAACAATTTGAA+TGG | + | chr2_4:40422308-40422327 | None:intergenic | 35.0% | |
| !! | ATGAATTTGGTTCTGCTTTG+CGG | - | chr2_4:40422419-40422438 | Msa0328220:intron | 35.0% |
| GTCATTAATATGAGCTACAC+AGG | + | chr2_4:40422686-40422705 | None:intergenic | 35.0% | |
| TTTCTATTCTATGGCCAACA+CGG | - | chr2_4:40422829-40422848 | Msa0328220:intron | 35.0% | |
| ! | TGTACCACACGAAAGTTTTA+GGG | - | chr2_4:40423008-40423027 | Msa0328220:CDS | 35.0% |
| !!! | GAAAGTTTTAGGGAAGTTTG+AGG | - | chr2_4:40423018-40423037 | Msa0328220:CDS | 35.0% |
| ATATCTGTGTATACCCGTAA+AGG | + | chr2_4:40423165-40423184 | None:intergenic | 35.0% | |
| CAAAAAGGAACAAAAGTTGG+AGG | + | chr2_4:40423319-40423338 | None:intergenic | 35.0% | |
| AAGTTCAGAATGCCTAATCT+AGG | - | chr2_4:40423467-40423486 | Msa0328220:intron | 35.0% | |
| AGTTCAGAATGCCTAATCTA+GGG | - | chr2_4:40423468-40423487 | Msa0328220:intron | 35.0% | |
| GAAGCTATTTATAGATTCCC+CGG | - | chr2_4:40423497-40423516 | Msa0328220:intron | 35.0% | |
| !! | ACAAATTGACTGGCTTATTC+CGG | + | chr2_4:40423519-40423538 | None:intergenic | 35.0% |
| AAGTTCAGAATGCCTAATCT+AGG | - | chr2_4:40423467-40423486 | Msa0328220:intron | 35.0% | |
| AGTTCAGAATGCCTAATCTA+GGG | - | chr2_4:40423468-40423487 | Msa0328220:intron | 35.0% | |
| ATGGTGATCATTCTGAATTC+TGG | - | chr2_4:40423658-40423677 | Msa0328220:intron | 35.0% | |
| GGTCACTTACTACCTATATT+TGG | - | chr2_4:40423679-40423698 | Msa0328220:intron | 35.0% | |
| TAACAATCCTAAGGAAACCT+GGG | + | chr2_4:40423787-40423806 | None:intergenic | 35.0% | |
| TTAACAATCCTAAGGAAACC+TGG | + | chr2_4:40423788-40423807 | None:intergenic | 35.0% | |
| TAGCACTACTATTCCAACAT+TGG | + | chr2_4:40423827-40423846 | None:intergenic | 35.0% | |
| ATCATTGTGGGTCTATACTT+TGG | - | chr2_4:40423900-40423919 | Msa0328220:CDS | 35.0% | |
| ! | TCTAGCACTCACTCTTTTAT+TGG | + | chr2_4:40423958-40423977 | None:intergenic | 35.0% |
| AGGCATACAAATGGAAAATG+AGG | - | chr2_4:40424173-40424192 | Msa0328220:CDS | 35.0% | |
| AATTCCTCCTAACTTAACTC+TGG | - | chr2_4:40424208-40424227 | Msa0328220:CDS | 35.0% | |
| !!! | ATTAGTTTTGAGTGGGACTT+AGG | + | chr2_4:40424309-40424328 | None:intergenic | 35.0% |
| TGTTAGGAAAGTTGTTAGAG+TGG | + | chr2_4:40424380-40424399 | None:intergenic | 35.0% | |
| TAGGAAAGCTTACATCAGTT+AGG | + | chr2_4:40424434-40424453 | None:intergenic | 35.0% | |
| CTGATGTAAGCTTTCCTAAT+TGG | - | chr2_4:40424436-40424455 | Msa0328220:intron | 35.0% | |
| AAGAGTTCAAGCATGTTGTT+AGG | + | chr2_4:40424469-40424488 | None:intergenic | 35.0% | |
| GAAAAGGTTCAGATGAAACA+AGG | + | chr2_4:40424560-40424579 | None:intergenic | 35.0% | |
| ATGCTTCTCAGAATGAGAAA+AGG | + | chr2_4:40424576-40424595 | None:intergenic | 35.0% | |
| ! | AGCAAACTTTAAAAACGTGG+AGG | + | chr2_4:40424651-40424670 | None:intergenic | 35.0% |
| !!! | TCCACGTTTTTAAAGTTTGC+TGG | - | chr2_4:40424650-40424669 | Msa0328220:CDS | 35.0% |
| ! | TCCAGCAAACTTTAAAAACG+TGG | + | chr2_4:40424654-40424673 | None:intergenic | 35.0% |
| CCAAACACATTCAAAAGAGA+GGG | + | chr2_4:40424689-40424708 | None:intergenic | 35.0% | |
| AATGTGTTTGGCTACAGTAA+AGG | - | chr2_4:40424698-40424717 | Msa0328220:CDS | 35.0% | |
| TGAAAACAGGTCAGACATTT+GGG | + | chr2_4:40424924-40424943 | None:intergenic | 35.0% | |
| ATGAAAACAGGTCAGACATT+TGG | + | chr2_4:40424925-40424944 | None:intergenic | 35.0% | |
| !!! | AAGTGTTGGTTTCTCTTTTG+AGG | - | chr2_4:40425065-40425084 | Msa0328220:intron | 35.0% |
| ACTCATCTGTCTCAACTTAT+TGG | - | chr2_4:40425183-40425202 | Msa0328220:intron | 35.0% | |
| TACAGTAGTATCAATAGTGC+GGG | + | chr2_4:40425274-40425293 | None:intergenic | 35.0% | |
| CAGGTTGTTCAATATACTTC+TGG | + | chr2_4:40425350-40425369 | None:intergenic | 35.0% | |
| TATTCCTGTCAGATTGTTTC+TGG | - | chr2_4:40425439-40425458 | Msa0328220:intron | 35.0% | |
| ! | ATTCCTGTCAGATTGTTTCT+GGG | - | chr2_4:40425440-40425459 | Msa0328220:intron | 35.0% |
| GAATTTGAGGAAGAACATCA+AGG | - | chr2_4:40425770-40425789 | Msa0328220:CDS | 35.0% | |
| GAAGAACATCAAGGTAATGA+GGG | - | chr2_4:40425779-40425798 | Msa0328220:CDS | 35.0% | |
| CTGTATCTCTTGCAGTTAAA+TGG | - | chr2_4:40425887-40425906 | Msa0328220:intron | 35.0% | |
| ATCTCTTGCAGTTAAATGGT+TGG | - | chr2_4:40425891-40425910 | Msa0328220:intron | 35.0% | |
| TGGATATACATGCAAGAGTA+AGG | - | chr2_4:40425911-40425930 | Msa0328220:intron | 35.0% | |
| AGTAAGGACTATGATTCGAT+CGG | - | chr2_4:40425927-40425946 | Msa0328220:intron | 35.0% | |
| TTTCCAACCTAAGTTACTAG+AGG | - | chr2_4:40426038-40426057 | Msa0328220:intron | 35.0% | |
| TTACCAACCTCTAGTAACTT+AGG | + | chr2_4:40426048-40426067 | None:intergenic | 35.0% | |
| TCAAATGAGAACCACTGTTT+CGG | + | chr2_4:40426071-40426090 | None:intergenic | 35.0% | |
| GTTGAAGAAATCACAACCTT+TGG | + | chr2_4:40426329-40426348 | None:intergenic | 35.0% | |
| CAGATTACAATTGACTAACC+TGG | + | chr2_4:40426387-40426406 | None:intergenic | 35.0% | |
| ! | GTCGAAGAAGGCTTTAATTA+AGG | + | chr2_4:40426431-40426450 | None:intergenic | 35.0% |
| ATTAAAGCCTTCTTCGACAA+CGG | - | chr2_4:40426433-40426452 | Msa0328220:CDS | 35.0% | |
| ! | TGCGTGCTGTAATTTTCTTT+CGG | - | chr2_4:40426527-40426546 | Msa0328220:CDS | 35.0% |
| GAGTAGAATTCCGTGAACTT+TGG | + | chr2_4:40419292-40419311 | None:intergenic | 40.0% | |
| TAGAATCCGAAGTCAAAACG+AGG | + | chr2_4:40419434-40419453 | None:intergenic | 40.0% | |
| !!! | CGTTTTGACTTCGGATTCTA+TGG | - | chr2_4:40419434-40419453 | Msa0328220:three_prime_UTR | 40.0% |
| ATGATCAACGAGGAAGACAT+TGG | + | chr2_4:40419469-40419488 | None:intergenic | 40.0% | |
| GTGAAGAATGTGAAGAAGGT+TGG | + | chr2_4:40419531-40419550 | None:intergenic | 40.0% | |
| TTGCGTGAAGAATGTGAAGA+AGG | + | chr2_4:40419535-40419554 | None:intergenic | 40.0% | |
| ! | GGGACTAACTTGATAGTAAG+TGG | - | chr2_4:40419836-40419855 | Msa0328220:CDS | 40.0% |
| !! | TTTTAGTTGCGTGAAGTTCC+GGG | - | chr2_4:40420000-40420019 | Msa0328220:intron | 40.0% |
| GATAGTGAAACTGAGGTGAA+TGG | - | chr2_4:40420069-40420088 | Msa0328220:intron | 40.0% | |
| TGTAGAAATGTTGGAGAGTG+AGG | - | chr2_4:40420131-40420150 | Msa0328220:intron | 40.0% | |
| AGGATTAAGAGTTACTGACC+GGG | + | chr2_4:40420263-40420282 | None:intergenic | 40.0% | |
| CAGGATTAAGAGTTACTGAC+CGG | + | chr2_4:40420264-40420283 | None:intergenic | 40.0% | |
| ! | CTTGCAGCATCTAGAATAAC+GGG | + | chr2_4:40420815-40420834 | None:intergenic | 40.0% |
| ! | GCTTGCAGCATCTAGAATAA+CGG | + | chr2_4:40420816-40420835 | None:intergenic | 40.0% |
| TTAGTGGCACTTAGCCTATA+TGG | - | chr2_4:40420916-40420935 | Msa0328220:intron | 40.0% | |
| TTAAGCATCTCAAAGGACTC+TGG | - | chr2_4:40420986-40421005 | Msa0328220:intron | 40.0% | |
| TCTTAAGGAGTTACCAGAAC+TGG | - | chr2_4:40421156-40421175 | Msa0328220:intron | 40.0% | |
| TTGCGCAGAGATATATGGAA+AGG | - | chr2_4:40421231-40421250 | Msa0328220:intron | 40.0% | |
| CAGCTTGATCAGCATTAGAT+GGG | + | chr2_4:40421261-40421280 | None:intergenic | 40.0% | |
| TCAGCTTGATCAGCATTAGA+TGG | + | chr2_4:40421262-40421281 | None:intergenic | 40.0% | |
| AGATTAGATACACTCAGCAG+TGG | + | chr2_4:40421289-40421308 | None:intergenic | 40.0% | |
| ATCTCTTGAGCATAGACTCA+AGG | + | chr2_4:40421466-40421485 | None:intergenic | 40.0% | |
| GAAAGGGATGGCAAACAAAT+GGG | + | chr2_4:40421625-40421644 | None:intergenic | 40.0% | |
| ATGTTCAAGTACGAAAGGGA+TGG | + | chr2_4:40421637-40421656 | None:intergenic | 40.0% | |
| CACGAATGTTCAAGTACGAA+AGG | + | chr2_4:40421642-40421661 | None:intergenic | 40.0% | |
| CTTTCGTACTTGAACATTCG+TGG | - | chr2_4:40421640-40421659 | Msa0328220:intron | 40.0% | |
| GAACATTCGTGGAAATCCAT+TGG | - | chr2_4:40421651-40421670 | Msa0328220:intron | 40.0% | |
| ! | AAACACTGGTTACCAGAGAA+TGG | + | chr2_4:40421813-40421832 | None:intergenic | 40.0% |
| ! | TTCTCTGGTAACCAGTGTTT+TGG | - | chr2_4:40421813-40421832 | Msa0328220:intron | 40.0% |
| !!! | TAACCAGTGTTTTGGCCTTT+GGG | - | chr2_4:40421821-40421840 | Msa0328220:intron | 40.0% |
| AGTTAGACGAAACCTCTGTA+TGG | - | chr2_4:40422098-40422117 | Msa0328220:intron | 40.0% | |
| !! | CTTGGTTCTAATGTAGCACT+AGG | - | chr2_4:40422150-40422169 | Msa0328220:intron | 40.0% |
| !! | TTGACCCATTGATTCGAGTA+GGG | + | chr2_4:40422278-40422297 | None:intergenic | 40.0% |
| !! | ATTGACCCATTGATTCGAGT+AGG | + | chr2_4:40422279-40422298 | None:intergenic | 40.0% |
| GGATAATTCTAGGTACGTGA+TGG | - | chr2_4:40422396-40422415 | Msa0328220:intron | 40.0% | |
| !! | AGGTACGTGATGGATGAATT+TGG | - | chr2_4:40422406-40422425 | Msa0328220:intron | 40.0% |
| ! | TGATGAGCCAAACTTTAGAG+TGG | - | chr2_4:40422447-40422466 | Msa0328220:intron | 40.0% |
| !! | AAAGGTGCCACTCTAAAGTT+TGG | + | chr2_4:40422457-40422476 | None:intergenic | 40.0% |
| ! | ACCTTTTCTTTTCATGCCAG+AGG | - | chr2_4:40422471-40422490 | Msa0328220:intron | 40.0% |
| ! | CCTTTTCTTTTCATGCCAGA+GGG | - | chr2_4:40422472-40422491 | Msa0328220:intron | 40.0% |
| CGTGACTTTCTTCTTGGTAT+TGG | - | chr2_4:40422879-40422898 | Msa0328220:intron | 40.0% | |
| ATTGAACCAAGCAGTAAGTC+TGG | + | chr2_4:40422925-40422944 | None:intergenic | 40.0% | |
| ! | CTGTACCACACGAAAGTTTT+AGG | - | chr2_4:40423007-40423026 | Msa0328220:CDS | 40.0% |
| ACTTCCCTAAAACTTTCGTG+TGG | + | chr2_4:40423015-40423034 | None:intergenic | 40.0% | |
| ATACACAGATATACCTCACG+TGG | - | chr2_4:40423173-40423192 | Msa0328220:intron | 40.0% | |
| ! | CACTTACTGATTGCAAACTC+AGG | + | chr2_4:40423216-40423235 | None:intergenic | 40.0% |
| CTGAGTTTGCAATCAGTAAG+TGG | - | chr2_4:40423214-40423233 | Msa0328220:intron | 40.0% | |
| TCTATGCATCTGATAGACAC+TGG | - | chr2_4:40423239-40423258 | Msa0328220:intron | 40.0% | |
| ! | CTTTGAAAAAGGCACAAGCA+GGG | - | chr2_4:40423347-40423366 | Msa0328220:intron | 40.0% |
| ! | AAAAGGGTTACTTTCCTCAC+CGG | - | chr2_4:40423424-40423443 | Msa0328220:CDS | 40.0% |
| GTTCAGAATGCCTAATCTAG+GGG | - | chr2_4:40423469-40423488 | Msa0328220:intron | 40.0% | |
| !! | AAATTGACTGGCTTATTCCG+GGG | + | chr2_4:40423517-40423536 | None:intergenic | 40.0% |
| !! | CAAATTGACTGGCTTATTCC+GGG | + | chr2_4:40423518-40423537 | None:intergenic | 40.0% |
| ATAGGCTGTAACCCTAGATT+AGG | + | chr2_4:40423559-40423578 | None:intergenic | 40.0% | |
| CCAACATTGGTACAAGTAGT+GGG | + | chr2_4:40423814-40423833 | None:intergenic | 40.0% | |
| TCCAACATTGGTACAAGTAG+TGG | + | chr2_4:40423815-40423834 | None:intergenic | 40.0% | |
| ! | GCACTCACTCTTTTATTGGA+TGG | + | chr2_4:40423954-40423973 | None:intergenic | 40.0% |
| GCTTCGACACAGAAAATGAT+GGG | + | chr2_4:40424047-40424066 | None:intergenic | 40.0% | |
| ACACAAAGTTCCCCATTTCT+TGG | - | chr2_4:40424109-40424128 | Msa0328220:intron | 40.0% | |
| CACAAAGTTCCCCATTTCTT+GGG | - | chr2_4:40424110-40424129 | Msa0328220:intron | 40.0% | |
| TACTGAAGCTCCCAAGAAAT+GGG | + | chr2_4:40424123-40424142 | None:intergenic | 40.0% | |
| GAGCTTCAGTACTAGTTGAT+AGG | - | chr2_4:40424132-40424151 | Msa0328220:CDS | 40.0% | |
| !! | CAGTACTAGTTGATAGGTAC+TGG | - | chr2_4:40424138-40424157 | Msa0328220:CDS | 40.0% |
| !! | GGTACTGGTTCAATATATGG+AGG | - | chr2_4:40424153-40424172 | Msa0328220:CDS | 40.0% |
| TCATCCAGAGTTAAGTTAGG+AGG | + | chr2_4:40424215-40424234 | None:intergenic | 40.0% | |
| CATATAATGATGTCTTCCCC+AGG | - | chr2_4:40424266-40424285 | Msa0328220:intron | 40.0% | |
| AATAGAGGCAAAGAAGCTAG+AGG | + | chr2_4:40424338-40424357 | None:intergenic | 40.0% | |
| AGCTTACATCAGTTAGGTCA+AGG | + | chr2_4:40424428-40424447 | None:intergenic | 40.0% | |
| ACATTCAAAAGAGAGGGAGA+AGG | + | chr2_4:40424683-40424702 | None:intergenic | 40.0% | |
| ! | CCCTCTCTTTTGAATGTGTT+TGG | - | chr2_4:40424686-40424705 | Msa0328220:CDS | 40.0% |
| GCCAAACACATTCAAAAGAG+AGG | + | chr2_4:40424690-40424709 | None:intergenic | 40.0% | |
| TATAATATGGACCTGCGTAC+AGG | - | chr2_4:40424737-40424756 | Msa0328220:intron | 40.0% | |
| ATGACAAGACAAGCCTCAAA+TGG | + | chr2_4:40424822-40424841 | None:intergenic | 40.0% | |
| ! | TGGGTGTTTTATCTTGCTTC+AGG | - | chr2_4:40425116-40425135 | Msa0328220:intron | 40.0% |
| TTTATCTTGCTTCAGGCACA+TGG | - | chr2_4:40425123-40425142 | Msa0328220:intron | 40.0% | |
| ACCTTTGGATCTTAAAACCC+TGG | - | chr2_4:40425241-40425260 | Msa0328220:intron | 40.0% | |
| !!! | TCCAGGGTTTTAAGATCCAA+AGG | + | chr2_4:40425245-40425264 | None:intergenic | 40.0% |
| GATCTTAAAACCCTGGAACA+TGG | - | chr2_4:40425248-40425267 | Msa0328220:intron | 40.0% | |
| AGTTTCCATGAGTCGGATTA+TGG | + | chr2_4:40425313-40425332 | None:intergenic | 40.0% | |
| ATAATCCGACTCATGGAAAC+TGG | - | chr2_4:40425312-40425331 | Msa0328220:intron | 40.0% | |
| ! | TGAACAACCTGCTTTATTCC+AGG | - | chr2_4:40425359-40425378 | Msa0328220:intron | 40.0% |
| ! | GAACAACCTGCTTTATTCCA+GGG | - | chr2_4:40425360-40425379 | Msa0328220:intron | 40.0% |
| ! | AACAACCTGCTTTATTCCAG+GGG | - | chr2_4:40425361-40425380 | Msa0328220:intron | 40.0% |
| ! | TTTTTCCCCTGGAATAAAGC+AGG | + | chr2_4:40425369-40425388 | None:intergenic | 40.0% |
| TGATCTCCGTTATGTAGTAC+TGG | - | chr2_4:40425392-40425411 | Msa0328220:intron | 40.0% | |
| !! | TCCGTTATGTAGTACTGGTT+CGG | - | chr2_4:40425397-40425416 | Msa0328220:intron | 40.0% |
| TCCGAACCAGTACTACATAA+CGG | + | chr2_4:40425401-40425420 | None:intergenic | 40.0% | |
| CTGACAGGAATATCTCCAAA+GGG | + | chr2_4:40425431-40425450 | None:intergenic | 40.0% | |
| TCTGACAGGAATATCTCCAA+AGG | + | chr2_4:40425432-40425451 | None:intergenic | 40.0% | |
| ATACCCAGAAACAATCTGAC+AGG | + | chr2_4:40425446-40425465 | None:intergenic | 40.0% | |
| GCATGTTCTCAGAATTATCG+TGG | - | chr2_4:40425710-40425729 | Msa0328220:CDS | 40.0% | |
| ! | GGATTTTGTGAGGGAATTTG+AGG | - | chr2_4:40425757-40425776 | Msa0328220:CDS | 40.0% |
| GGAAGAACATCAAGGTAATG+AGG | - | chr2_4:40425778-40425797 | Msa0328220:CDS | 40.0% | |
| ! | TATGATTCGATCGGTGTTTG+AGG | - | chr2_4:40425936-40425955 | Msa0328220:intron | 40.0% |
| AGATGCATAGTCCAACATCA+AGG | - | chr2_4:40425980-40425999 | Msa0328220:intron | 40.0% | |
| GATGCATAGTCCAACATCAA+GGG | - | chr2_4:40425981-40426000 | Msa0328220:intron | 40.0% | |
| CCAACATCAAGGGCAATTTA+CGG | - | chr2_4:40425991-40426010 | Msa0328220:intron | 40.0% | |
| CAACCTCTAGTAACTTAGGT+TGG | + | chr2_4:40426044-40426063 | None:intergenic | 40.0% | |
| CAACCTAAGTTACTAGAGGT+TGG | - | chr2_4:40426042-40426061 | Msa0328220:intron | 40.0% | |
| ACGAGCTTGCAAATATGACA+TGG | - | chr2_4:40426276-40426295 | Msa0328220:intron | 40.0% | |
| TATGACATGGATACCGTTGT+TGG | - | chr2_4:40426289-40426308 | Msa0328220:intron | 40.0% | |
| AATACCTCCTTCTCCAACAA+CGG | + | chr2_4:40426305-40426324 | None:intergenic | 40.0% | |
| ! | GACTACAGGTTCTTTTAGCA+AGG | - | chr2_4:40426455-40426474 | Msa0328220:CDS | 40.0% |
| GAAAGAAAATTACAGCACGC+AGG | + | chr2_4:40426528-40426547 | None:intergenic | 40.0% | |
| !! | CTGTAATTTTCTTTCGGTGC+TGG | - | chr2_4:40426533-40426552 | Msa0328220:CDS | 40.0% |
| AGCAAGTTTGGTTATTTGGC+TGG | - | chr2_4:40426584-40426603 | Msa0328220:CDS | 40.0% | |
| TTTGGCTGGATAACAAACAG+CGG | - | chr2_4:40426598-40426617 | Msa0328220:CDS | 40.0% | |
| AACTTTGGCGAAGTCTTCGA+AGG | + | chr2_4:40419277-40419296 | None:intergenic | 45.0% | |
| GAAGACTTCGCCAAAGTTCA+CGG | - | chr2_4:40419279-40419298 | Msa0328220:three_prime_UTR | 45.0% | |
| TGGAGAGTTTGTGGAAGAGA+CGG | + | chr2_4:40419347-40419366 | None:intergenic | 45.0% | |
| TCTTCCTCGTTGATCATGCT+TGG | - | chr2_4:40419472-40419491 | Msa0328220:CDS | 45.0% | |
| AAGTCCAAGCATGATCAACG+AGG | + | chr2_4:40419479-40419498 | None:intergenic | 45.0% | |
| !! | TGAGAGCACCCTACAAAGTT+AGG | - | chr2_4:40419878-40419897 | Msa0328220:CDS | 45.0% |
| !! | GAGAGCACCCTACAAAGTTA+GGG | - | chr2_4:40419879-40419898 | Msa0328220:CDS | 45.0% |
| ! | GATGGGTTCTTTGATGTGTG+TGG | - | chr2_4:40420035-40420054 | Msa0328220:intron | 45.0% |
| ! | TGATGATGTTTCGGGAGAGA+AGG | - | chr2_4:40420101-40420120 | Msa0328220:CDS | 45.0% |
| GTTCGAGAGGTGAAAGAGAA+AGG | - | chr2_4:40420153-40420172 | Msa0328220:intron | 45.0% | |
| GAGGTGAAAGAGAAAGGTGA+CGG | - | chr2_4:40420159-40420178 | Msa0328220:intron | 45.0% | |
| ! | AAGGTGACGGTACATTGAGA+TGG | - | chr2_4:40420172-40420191 | Msa0328220:intron | 45.0% |
| TGACGGTACATTGAGATGGT+TGG | - | chr2_4:40420176-40420195 | Msa0328220:intron | 45.0% | |
| TTGAGATGGTTGGAGCTTGA+TGG | - | chr2_4:40420186-40420205 | Msa0328220:intron | 45.0% | |
| ! | ATAACGGGATCTGAGATGAC+AGG | + | chr2_4:40420800-40420819 | None:intergenic | 45.0% |
| ! | AATTCTGAAAGGGAAAGGGG+AGG | + | chr2_4:40420897-40420916 | None:intergenic | 45.0% |
| ! | TCTAGTGATGGTGATCTTGC+AGG | - | chr2_4:40421127-40421146 | Msa0328220:CDS | 45.0% |
| ! | GGCTTTTGCGCAGAGATATA+TGG | - | chr2_4:40421226-40421245 | Msa0328220:intron | 45.0% |
| GACGATTCCCTCATTTGGTT+AGG | - | chr2_4:40421591-40421610 | Msa0328220:intron | 45.0% | |
| CGAAAGGGATGGCAAACAAA+TGG | + | chr2_4:40421626-40421645 | None:intergenic | 45.0% | |
| GTAACTGAGCTTTGCTCCAA+TGG | + | chr2_4:40421670-40421689 | None:intergenic | 45.0% | |
| ! | TCTCAGCAGCTCTAACAAGT+CGG | + | chr2_4:40421692-40421711 | None:intergenic | 45.0% |
| CTCTTGCTTACGTTCATTGG+AGG | - | chr2_4:40421717-40421736 | Msa0328220:intron | 45.0% | |
| !!! | GTAACCAGTGTTTTGGCCTT+TGG | - | chr2_4:40421820-40421839 | Msa0328220:intron | 45.0% |
| ATTCCCAAAGGCCAAAACAC+TGG | + | chr2_4:40421827-40421846 | None:intergenic | 45.0% | |
| TCGATATTCCTGGTCCTCTT+GGG | - | chr2_4:40421864-40421883 | Msa0328220:intron | 45.0% | |
| !! | GGGAAGTGCCATTGAAATTC+TGG | - | chr2_4:40421886-40421905 | Msa0328220:intron | 45.0% |
| TGTGACCCTACTCGAATCAA+TGG | - | chr2_4:40422270-40422289 | Msa0328220:intron | 45.0% | |
| GTGACCCTACTCGAATCAAT+GGG | - | chr2_4:40422271-40422290 | Msa0328220:intron | 45.0% | |
| CCCTCTGGCATGAAAAGAAA+AGG | + | chr2_4:40422475-40422494 | None:intergenic | 45.0% | |
| ! | GTATTTTATGGCATGCCCTC+TGG | - | chr2_4:40422750-40422769 | Msa0328220:CDS | 45.0% |
| TATGGCCAACACGGAATGTT+TGG | - | chr2_4:40422838-40422857 | Msa0328220:intron | 45.0% | |
| CCTTTCCAAACATTCCGTGT+TGG | + | chr2_4:40422846-40422865 | None:intergenic | 45.0% | |
| CCAACACGGAATGTTTGGAA+AGG | - | chr2_4:40422843-40422862 | Msa0328220:intron | 45.0% | |
| TGCACTCGTGACTTTCTTCT+TGG | - | chr2_4:40422873-40422892 | Msa0328220:intron | 45.0% | |
| AGTGGGTGGTATTAAACTGG+TGG | + | chr2_4:40423097-40423116 | None:intergenic | 45.0% | |
| CACAGTGGGTGGTATTAAAC+TGG | + | chr2_4:40423100-40423119 | None:intergenic | 45.0% | |
| !! | AGAAGTATTCGCCCACATGA+TGG | - | chr2_4:40423135-40423154 | Msa0328220:intron | 45.0% |
| ! | GAAGTATTCGCCCACATGAT+GGG | - | chr2_4:40423136-40423155 | Msa0328220:intron | 45.0% |
| !! | GCTTTGAAAAAGGCACAAGC+AGG | - | chr2_4:40423346-40423365 | Msa0328220:intron | 45.0% |
| ! | GAAATTGGCTTATTCCGGTG+AGG | + | chr2_4:40423441-40423460 | None:intergenic | 45.0% |
| CTGGCAGTTGCCAATTAAGA+CGG | - | chr2_4:40423583-40423602 | Msa0328220:intron | 45.0% | |
| CAGGCTGTAACCGTCTTAAT+TGG | + | chr2_4:40423596-40423615 | None:intergenic | 45.0% | |
| CTCTAGTGAGTCACAGCTTA+TGG | - | chr2_4:40423639-40423658 | Msa0328220:intron | 45.0% | |
| AAGCTTTCCCAGGTTTCCTT+AGG | - | chr2_4:40423777-40423796 | Msa0328220:CDS | 45.0% | |
| GTGGGAGGTTAACAATCCTA+AGG | + | chr2_4:40423796-40423815 | None:intergenic | 45.0% | |
| ! | ACATTGGTACAAGTAGTGGG+AGG | + | chr2_4:40423811-40423830 | None:intergenic | 45.0% |
| CCCACTACTTGTACCAATGT+TGG | - | chr2_4:40423811-40423830 | Msa0328220:CDS | 45.0% | |
| CGCTTCGACACAGAAAATGA+TGG | + | chr2_4:40424048-40424067 | None:intergenic | 45.0% | |
| ACTGAAGCTCCCAAGAAATG+GGG | + | chr2_4:40424122-40424141 | None:intergenic | 45.0% | |
| GTACTGAAGCTCCCAAGAAA+TGG | + | chr2_4:40424124-40424143 | None:intergenic | 45.0% | |
| TTATCCAGGTCAAGATGAGC+AGG | - | chr2_4:40424239-40424258 | Msa0328220:intron | 45.0% | |
| AGAGACCAGCTCAAATACCT+GGG | + | chr2_4:40424286-40424305 | None:intergenic | 45.0% | |
| TTCCTAACAGAGACTGTGCT+TGG | - | chr2_4:40424391-40424410 | Msa0328220:intron | 45.0% | |
| TGTTAGGAGCAGACCCAATT+AGG | + | chr2_4:40424453-40424472 | None:intergenic | 45.0% | |
| !! | GGTTGATGAGGAGTTGAAGA+AGG | - | chr2_4:40424758-40424777 | Msa0328220:intron | 45.0% |
| TTGCTGATCTGTTATTCCCG+TGG | + | chr2_4:40424784-40424803 | None:intergenic | 45.0% | |
| TAAGTAGGCTGCAACCATTG+AGG | + | chr2_4:40425153-40425172 | None:intergenic | 45.0% | |
| GAGAAGGACTAGACAACCTT+TGG | - | chr2_4:40425226-40425245 | Msa0328220:intron | 45.0% | |
| TTGGACCAGTTTCCATGAGT+CGG | + | chr2_4:40425320-40425339 | None:intergenic | 45.0% | |
| !! | GGAGATCAAACTTTTTCCCC+TGG | + | chr2_4:40425380-40425399 | None:intergenic | 45.0% |
| GATGTTGGACTATGCATCTC+AGG | + | chr2_4:40425979-40425998 | None:intergenic | 45.0% | |
| CCGTAAATTGCCCTTGATGT+TGG | + | chr2_4:40425994-40426013 | None:intergenic | 45.0% | |
| TGCAAGCTCGTGTACAATCA+GGG | + | chr2_4:40426267-40426286 | None:intergenic | 45.0% | |
| TTGCAAGCTCGTGTACAATC+AGG | + | chr2_4:40426268-40426287 | None:intergenic | 45.0% | |
| ATGGATACCGTTGTTGGAGA+AGG | - | chr2_4:40426295-40426314 | Msa0328220:intron | 45.0% | |
| AGAGTTTGTGGAAGAGACGG+CGG | + | chr2_4:40419344-40419363 | None:intergenic | 50.0% | |
| AGGTTTCGGTGGAGAGTTTG+TGG | + | chr2_4:40419356-40419375 | None:intergenic | 50.0% | |
| TCTCTTCGCAAGGTTCGATC+TGG | + | chr2_4:40419398-40419417 | None:intergenic | 50.0% | |
| CTCATGCGATTCTCTTCGCA+AGG | + | chr2_4:40419408-40419427 | None:intergenic | 50.0% | |
| !!! | GAGACGCCTCGTTTTGACTT+CGG | - | chr2_4:40419425-40419444 | Msa0328220:three_prime_UTR | 50.0% |
| ACTCTCCGACGCTTACAAAC+AGG | - | chr2_4:40419503-40419522 | Msa0328220:CDS | 50.0% | |
| TGGGACCTGTTTGTAAGCGT+CGG | + | chr2_4:40419511-40419530 | None:intergenic | 50.0% | |
| ! | AAGTTCCGGGATTAGCAGAG+AGG | - | chr2_4:40420013-40420032 | Msa0328220:intron | 50.0% |
| TTACTGACCGGGAATCTAGC+AGG | + | chr2_4:40420252-40420271 | None:intergenic | 50.0% | |
| TCACAAGCAATTTCGGGGAG+TGG | - | chr2_4:40421197-40421216 | Msa0328220:intron | 50.0% | |
| CACAAGCAATTTCGGGGAGT+GGG | - | chr2_4:40421198-40421217 | Msa0328220:intron | 50.0% | |
| ! | AATTTCGGGGAGTGGGCTTT+GGG | - | chr2_4:40421205-40421224 | Msa0328220:intron | 50.0% |
| GTCGATATTCCTGGTCCTCT+TGG | - | chr2_4:40421863-40421882 | Msa0328220:intron | 50.0% | |
| CGATATTCCTGGTCCTCTTG+GGG | - | chr2_4:40421865-40421884 | Msa0328220:intron | 50.0% | |
| GATATTCCTGGTCCTCTTGG+GGG | - | chr2_4:40421866-40421885 | Msa0328220:intron | 50.0% | |
| TTCTTCCTCGCCTTCCTGAA+TGG | - | chr2_4:40421993-40422012 | Msa0328220:intron | 50.0% | |
| CATCAGGAGTCCATTCAGGA+AGG | + | chr2_4:40422006-40422025 | None:intergenic | 50.0% | |
| CGGTCATGAATAGGCTCATC+AGG | + | chr2_4:40422022-40422041 | None:intergenic | 50.0% | |
| AGGATGGAGGAGAAGTTTCG+CGG | + | chr2_4:40422715-40422734 | None:intergenic | 50.0% | |
| GTTCTGCCAGACTTACTGCT+TGG | - | chr2_4:40422916-40422935 | Msa0328220:CDS | 50.0% | |
| GCGAATACTTCTGCTCTCAG+AGG | + | chr2_4:40423127-40423146 | None:intergenic | 50.0% | |
| GTAAAGGACGCCCATCATGT+GGG | + | chr2_4:40423149-40423168 | None:intergenic | 50.0% | |
| !! | CACATGATGGGCGTCCTTTA+CGG | - | chr2_4:40423148-40423167 | Msa0328220:intron | 50.0% |
| !! | ACATGATGGGCGTCCTTTAC+GGG | - | chr2_4:40423149-40423168 | Msa0328220:intron | 50.0% |
| GTCAAGTACTCTTCCACGTG+AGG | + | chr2_4:40423189-40423208 | None:intergenic | 50.0% | |
| AGAATGCCTAATCTAGGGGC+CGG | - | chr2_4:40423473-40423492 | Msa0328220:intron | 50.0% | |
| AGGGTTACAGCCTATGTGAC+TGG | - | chr2_4:40423564-40423583 | Msa0328220:intron | 50.0% | |
| TTGGCAACTGCCAGTCACAT+AGG | + | chr2_4:40423577-40423596 | None:intergenic | 50.0% | |
| AAGACGGTTACAGCCTGTCA+AGG | - | chr2_4:40423599-40423618 | Msa0328220:intron | 50.0% | |
| AGCCTGTCAAGGCAGTTACA+AGG | - | chr2_4:40423610-40423629 | Msa0328220:intron | 50.0% | |
| GCCTGTCAAGGCAGTTACAA+GGG | - | chr2_4:40423611-40423630 | Msa0328220:intron | 50.0% | |
| TCCCTTGTAACTGCCTTGAC+AGG | + | chr2_4:40423615-40423634 | None:intergenic | 50.0% | |
| AACCTGGGAAAGCTTCTGAG+AGG | + | chr2_4:40423772-40423791 | None:intergenic | 50.0% | |
| GTTGCCAGCATTCCTCATGT+CGG | - | chr2_4:40423998-40424017 | Msa0328220:intron | 50.0% | |
| CATTCCGACATGAGGAATGC+TGG | + | chr2_4:40424005-40424024 | None:intergenic | 50.0% | |
| TGGGTGAACATTCCGACATG+AGG | + | chr2_4:40424013-40424032 | None:intergenic | 50.0% | |
| !! | GACACAGAAAATGATGGGCG+TGG | + | chr2_4:40424042-40424061 | None:intergenic | 50.0% |
| TCATCCTGCTCATCTTGACC+TGG | + | chr2_4:40424246-40424265 | None:intergenic | 50.0% | |
| TCTTCCCCAGGTATTTGAGC+TGG | - | chr2_4:40424278-40424297 | Msa0328220:intron | 50.0% | |
| GAGACCAGCTCAAATACCTG+GGG | + | chr2_4:40424285-40424304 | None:intergenic | 50.0% | |
| GAGAGACCAGCTCAAATACC+TGG | + | chr2_4:40424287-40424306 | None:intergenic | 50.0% | |
| AGCCAAGCACAGTCTCTGTT+AGG | + | chr2_4:40424396-40424415 | None:intergenic | 50.0% | |
| TGAGGAGTTGAAGAAGGCCA+CGG | - | chr2_4:40424764-40424783 | Msa0328220:intron | 50.0% | |
| AGGCACATGGATCTCCTCAA+TGG | - | chr2_4:40425136-40425155 | Msa0328220:intron | 50.0% | |
| ACCAGCCATAATCCGACTCA+TGG | - | chr2_4:40425305-40425324 | Msa0328220:intron | 50.0% | |
| TCCATGAGTCGGATTATGGC+TGG | + | chr2_4:40425309-40425328 | None:intergenic | 50.0% | |
| !! | GAGGTTGGTAACCGAAACAG+TGG | - | chr2_4:40426057-40426076 | Msa0328220:intron | 50.0% |
| GATACCGTTGTTGGAGAAGG+AGG | - | chr2_4:40426298-40426317 | Msa0328220:intron | 50.0% | |
| !! | GGAGAAGGAGGTATTGCCAA+AGG | - | chr2_4:40426310-40426329 | Msa0328220:intron | 50.0% |
| CTGTAGTCCGTTGTCGAAGA+AGG | + | chr2_4:40426443-40426462 | None:intergenic | 50.0% | |
| !! | CTTCTTCGACAACGGACTAC+AGG | - | chr2_4:40426441-40426460 | Msa0328220:CDS | 50.0% |
| ! | CAGGTTCTTTTAGCAAGGCC+TGG | - | chr2_4:40426460-40426479 | Msa0328220:CDS | 50.0% |
| CGGAATTCTACTCGCCGCTT+CGG | - | chr2_4:40419299-40419318 | Msa0328220:three_prime_UTR | 55.0% | |
| GGAATTCTACTCGCCGCTTC+GGG | - | chr2_4:40419300-40419319 | Msa0328220:three_prime_UTR | 55.0% | |
| GGATTCCGGTAAACCCGAAG+CGG | + | chr2_4:40419316-40419335 | None:intergenic | 55.0% | |
| CTCTCCACCGAAACCTTCGA+CGG | - | chr2_4:40419360-40419379 | Msa0328220:three_prime_UTR | 55.0% | |
| ! | TCCGGGATTAGCAGAGAGGA+TGG | - | chr2_4:40420017-40420036 | Msa0328220:intron | 55.0% |
| CCCATCCTCTCTGCTAATCC+CGG | + | chr2_4:40420021-40420040 | None:intergenic | 55.0% | |
| ! | CCGGGATTAGCAGAGAGGAT+GGG | - | chr2_4:40420018-40420037 | Msa0328220:intron | 55.0% |
| GTTGGAGAGTGAGGTTCGAG+AGG | - | chr2_4:40420140-40420159 | Msa0328220:intron | 55.0% | |
| GGACTTGCCTGCTAGATTCC+CGG | - | chr2_4:40420242-40420261 | Msa0328220:intron | 55.0% | |
| ! | CAATTTCGGGGAGTGGGCTT+TGG | - | chr2_4:40421204-40421223 | Msa0328220:intron | 55.0% |
| TCAATGGCACTTCCCCCAAG+AGG | + | chr2_4:40421881-40421900 | None:intergenic | 55.0% | |
| GGCTCATCAGGAGTCCATTC+AGG | + | chr2_4:40422010-40422029 | None:intergenic | 55.0% | |
| GCCAGAGGGCAATCTAGCAT+CGG | - | chr2_4:40422486-40422505 | Msa0328220:intron | 55.0% | |
| !! | GCAATCTAGCATCGGCTGTG+AGG | - | chr2_4:40422494-40422513 | Msa0328220:intron | 55.0% |
| CTCTCAGAGGACTGCACAGT+GGG | + | chr2_4:40423114-40423133 | None:intergenic | 55.0% | |
| CGTAAAGGACGCCCATCATG+TGG | + | chr2_4:40423150-40423169 | None:intergenic | 55.0% | |
| ! | GGGAAAGCTTCTGAGAGGTG+AGG | + | chr2_4:40423767-40423786 | None:intergenic | 55.0% |
| CACCTCTCAGAAGCTTTCCC+AGG | - | chr2_4:40423767-40423786 | Msa0328220:CDS | 55.0% | |
| !! | ATGATGGGCGTGGAAGCACT+GGG | + | chr2_4:40424032-40424051 | None:intergenic | 55.0% |
| !! | AATGATGGGCGTGGAAGCAC+TGG | + | chr2_4:40424033-40424052 | None:intergenic | 55.0% |
| AGAGACTGTGCTTGGCTAGC+AGG | - | chr2_4:40424399-40424418 | Msa0328220:intron | 55.0% | |
| GAGACTGTGCTTGGCTAGCA+GGG | - | chr2_4:40424400-40424419 | Msa0328220:intron | 55.0% | |
| !! | GACCTGCGTACAGGTTGATG+AGG | - | chr2_4:40424746-40424765 | Msa0328220:intron | 55.0% |
| CTCCTCATCAACCTGTACGC+AGG | + | chr2_4:40424751-40424770 | None:intergenic | 55.0% | |
| GAGGAGTTGAAGAAGGCCAC+GGG | - | chr2_4:40424765-40424784 | Msa0328220:intron | 55.0% | |
| ATAGTGCGGGCCATGTTCCA+GGG | + | chr2_4:40425261-40425280 | None:intergenic | 55.0% | |
| AATAGTGCGGGCCATGTTCC+AGG | + | chr2_4:40425262-40425281 | None:intergenic | 55.0% | |
| ! | ATCGGTGTTTGAGGCAGCTG+CGG | - | chr2_4:40425945-40425964 | Msa0328220:intron | 55.0% |
| ! | ACTCGCCGCTTCGGGTTTAC+CGG | - | chr2_4:40419308-40419327 | Msa0328220:three_prime_UTR | 60.0% |
| GTTTGTGGAAGAGACGGCGG+TGG | + | chr2_4:40419341-40419360 | None:intergenic | 60.0% | |
| TCCACCGAAACCTTCGACGG+CGG | - | chr2_4:40419363-40419382 | Msa0328220:three_prime_UTR | 60.0% | |
| GGAGTCCATTCAGGAAGGCG+AGG | + | chr2_4:40422001-40422020 | None:intergenic | 60.0% | |
| GCCGATGCTAGATTGCCCTC+TGG | + | chr2_4:40422490-40422509 | None:intergenic | 60.0% | |
| TCAGAGGACTGCACAGTGGG+TGG | + | chr2_4:40423111-40423130 | None:intergenic | 60.0% | |
| GCTCTCAGAGGACTGCACAG+TGG | + | chr2_4:40423115-40423134 | None:intergenic | 60.0% | |
| GCTTCTCCGGCCCCTAGATT+AGG | + | chr2_4:40423482-40423501 | None:intergenic | 60.0% | |
| GGTTCGGAGCATGCACCCTT+TGG | - | chr2_4:40425413-40425432 | Msa0328220:intron | 60.0% | |
| AGACGGCGGTGGAGGGATTC+CGG | + | chr2_4:40419330-40419349 | None:intergenic | 65.0% | |
| GTGGAAGAGACGGCGGTGGA+GGG | + | chr2_4:40419337-40419356 | None:intergenic | 65.0% | |
| TGTGGAAGAGACGGCGGTGG+AGG | + | chr2_4:40419338-40419357 | None:intergenic | 65.0% | |
| CTCGCCGCCGTCGAAGGTTT+CGG | + | chr2_4:40419370-40419389 | None:intergenic | 65.0% | |
| GAAATGCTCGCCGCCGTCGA+AGG | + | chr2_4:40419376-40419395 | None:intergenic | 65.0% | |
| GCACTTCCCCCAAGAGGACC+AGG | + | chr2_4:40421875-40421894 | None:intergenic | 65.0% | |
| GCCGCCGTCGAAGGTTTCGG+TGG | + | chr2_4:40419367-40419386 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 40419237 | 40426632 | 40419237 | ID=Msa0328220;Name=Msa0328220 |
| chr2_4 | mRNA | 40419237 | 40426632 | 40419237 | ID=Msa0328220-mRNA-1;Parent=Msa0328220;Name=Msa0328220-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.92|0.93|1|0.92|0.93|15|230|855 |
| chr2_4 | exon | 40419237 | 40419616 | 40419237 | ID=Msa0328220-mRNA-1:exon:12386;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40419810 | 40419967 | 40419810 | ID=Msa0328220-mRNA-1:exon:12385;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40420078 | 40420147 | 40420078 | ID=Msa0328220-mRNA-1:exon:12384;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40420247 | 40420321 | 40420247 | ID=Msa0328220-mRNA-1:exon:12383;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40420408 | 40420731 | 40420408 | ID=Msa0328220-mRNA-1:exon:12382;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40420997 | 40421154 | 40420997 | ID=Msa0328220-mRNA-1:exon:12381;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40422641 | 40422806 | 40422641 | ID=Msa0328220-mRNA-1:exon:12380;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40422901 | 40423042 | 40422901 | ID=Msa0328220-mRNA-1:exon:12379;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40423354 | 40423461 | 40423354 | ID=Msa0328220-mRNA-1:exon:12378;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40423750 | 40424006 | 40423750 | ID=Msa0328220-mRNA-1:exon:12377;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40424131 | 40424256 | 40424131 | ID=Msa0328220-mRNA-1:exon:12376;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40424521 | 40424737 | 40424521 | ID=Msa0328220-mRNA-1:exon:12375;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40424832 | 40424956 | 40424832 | ID=Msa0328220-mRNA-1:exon:12374;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40425606 | 40425863 | 40425606 | ID=Msa0328220-mRNA-1:exon:12373;Parent=Msa0328220-mRNA-1 |
| chr2_4 | exon | 40426399 | 40426632 | 40426399 | ID=Msa0328220-mRNA-1:exon:12372;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40426399 | 40426632 | 40426399 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40425606 | 40425863 | 40425606 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40424832 | 40424956 | 40424832 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40424521 | 40424737 | 40424521 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40424131 | 40424256 | 40424131 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40423750 | 40424006 | 40423750 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40423354 | 40423461 | 40423354 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40422901 | 40423042 | 40422901 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40422641 | 40422806 | 40422641 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40420997 | 40421154 | 40420997 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40420408 | 40420731 | 40420408 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40420247 | 40420321 | 40420247 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40420078 | 40420147 | 40420078 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40419810 | 40419967 | 40419810 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | CDS | 40419467 | 40419616 | 40419467 | ID=Msa0328220-mRNA-1:cds;Parent=Msa0328220-mRNA-1 |
| chr2_4 | three_prime_UTR | 40419237 | 40419466 | 40419237 | ID=Msa0328220-mRNA-1:three_prime_utr;Parent=Msa0328220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
