Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328290 | XP_013463548.1 | 95.522 | 871 | 18 | 4 | 1 | 851 | 1 | 870 | 0.0 | 1706 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328290 | sp|Q3UDE2|TTL12_MOUSE | 37.059 | 510 | 253 | 15 | 380 | 856 | 161 | 635 | 4.22e-95 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0246180 | Msa0328290 | 0.864943 | 8.446851e-65 | -8.615850e-47 |
| Msa0284700 | Msa0328290 | 0.870107 | 1.872891e-66 | -8.615850e-47 |
| Msa0328220 | Msa0328290 | 0.909883 | 3.476617e-82 | -8.615850e-47 |
| Msa0328290 | Msa1003740 | 0.817410 | 3.345415e-52 | -8.615850e-47 |
| Msa0328290 | Msa1003930 | 0.822006 | 2.983705e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328290 | MtrunA17_Chr2g0300641 | 95.522 | 871 | 18 | 4 | 1 | 851 | 1 | 870 | 0.0 | 1706 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328290 | AT1G77550.1 | 65.238 | 863 | 268 | 7 | 10 | 852 | 3 | 853 | 0.0 | 1144 |
Find 219 sgRNAs with CRISPR-Local
Find 520 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCACTTTCCAATATTT+TGG | 0.092480 | 2_4:-40492997 | None:intergenic |
| CATATTATATCTGCATCTTT+TGG | 0.139160 | 2_4:-40495747 | None:intergenic |
| TATTCCTGTCAGATTGTTTC+TGG | 0.155637 | 2_4:+40496463 | Msa0328290:CDS |
| CAATTTCGGGGAGTGGGCTT+TGG | 0.216553 | 2_4:+40492251 | Msa0328290:CDS |
| CAACTTTCACAAGCAATTTC+GGG | 0.220240 | 2_4:+40492238 | Msa0328290:CDS |
| GTCGAAGAAGGCTTTAATTA+AGG | 0.230506 | 2_4:-40497449 | None:intergenic |
| CACATGATGGGCGTCCTTTA+CGG | 0.233516 | 2_4:+40494196 | Msa0328290:CDS |
| TCAACTTTCACAAGCAATTT+CGG | 0.237496 | 2_4:+40492237 | Msa0328290:CDS |
| TATGATTCGATCGGTGTTTC+AGG | 0.240319 | 2_4:+40496959 | Msa0328290:CDS |
| ACTCATCTGTCTCAACTTAT+TGG | 0.250244 | 2_4:+40496207 | Msa0328290:CDS |
| ATAACTTCTTGAATCAATTC+AGG | 0.269467 | 2_4:-40492005 | None:intergenic |
| CCAAACATTTCTGAACTAAA+TGG | 0.271808 | 2_4:+40492963 | Msa0328290:CDS |
| GGGAAGTGCCATTGAAATTC+TGG | 0.272207 | 2_4:+40492932 | Msa0328290:CDS |
| AGTTTCCATGAGTCGGATTA+TGG | 0.278974 | 2_4:-40496334 | None:intergenic |
| TGCACTCGTGACTTTCTTCT+TGG | 0.281535 | 2_4:+40493921 | Msa0328290:CDS |
| ATTCTCTTGCTTACGTTCAT+TGG | 0.283449 | 2_4:+40492760 | Msa0328290:CDS |
| CTGTATCTCTTGCAGTTAAA+TGG | 0.290895 | 2_4:+40496910 | Msa0328290:intron |
| TTAGTGGCACTTAGCCTATA+TGG | 0.294517 | 2_4:+40491966 | Msa0328290:CDS |
| AGGTACGTGATGGATGAATT+TGG | 0.296880 | 2_4:+40493454 | Msa0328290:intron |
| GTCGATATTCCTGGTCCTCT+TGG | 0.300317 | 2_4:+40492909 | Msa0328290:CDS |
| CAGGTTGTTCAATATACTTC+TGG | 0.310081 | 2_4:-40496371 | None:intergenic |
| TATTTGTGCATCCAAAATAT+TGG | 0.310689 | 2_4:+40492986 | Msa0328290:CDS |
| CAAAAGATGCAGATATAATA+TGG | 0.314062 | 2_4:+40495748 | Msa0328290:CDS |
| AGCTAACAACCAATATTCTT+TGG | 0.314596 | 2_4:+40496580 | Msa0328290:CDS |
| CGTGACTTTCTTCTTGGTAT+TGG | 0.317812 | 2_4:+40493927 | Msa0328290:CDS |
| TGAAACTCATTTCACTGTTA+TGG | 0.319368 | 2_4:+40496625 | Msa0328290:CDS |
| AATAGTGCGGGCCATGTTCC+AGG | 0.320213 | 2_4:-40496283 | None:intergenic |
| GTTGATGATGATGATGTTTC+GGG | 0.325483 | 2_4:+40491157 | Msa0328290:CDS |
| AATTTCGGGGAGTGGGCTTT+GGG | 0.325758 | 2_4:+40492252 | Msa0328290:CDS |
| ACTTACCAATTCTGAAGAAC+TGG | 0.326545 | 2_4:-40492068 | None:intergenic |
| TCAGCTTGATCAGCATTAGA+TGG | 0.330080 | 2_4:-40492306 | None:intergenic |
| TGATGATATGTTTCTCTCAT+TGG | 0.333223 | 2_4:+40491285 | Msa0328290:CDS |
| ACTTGGATAAAATAGTTCTC+TGG | 0.333720 | 2_4:-40493996 | None:intergenic |
| AATAAATCACAAGAATATTA+AGG | 0.336524 | 2_4:+40496759 | Msa0328290:CDS |
| ACTCGCCGCTTCGGGTTTAC+CGG | 0.347515 | 2_4:+40490383 | Msa0328290:CDS |
| TCGATATTCCTGGTCCTCTT+GGG | 0.347686 | 2_4:+40492910 | Msa0328290:CDS |
| TATGGCCAACACGGAATGTT+TGG | 0.355349 | 2_4:+40493886 | Msa0328290:CDS |
| TCTTAAGGAGTTACCAGAAC+TGG | 0.362100 | 2_4:+40492203 | Msa0328290:CDS |
| ACATGATGGGCGTCCTTTAC+GGG | 0.362567 | 2_4:+40494197 | Msa0328290:CDS |
| ATAACCCAGTTCTTCAGAAT+TGG | 0.365410 | 2_4:+40492063 | Msa0328290:CDS |
| AAGTTATACATCTAATTTCC+AGG | 0.366200 | 2_4:-40497499 | None:intergenic |
| TCTAGTGATGGTGATCTTGC+AGG | 0.366268 | 2_4:+40492174 | Msa0328290:intron |
| AGACGGCGGTGGAGGGATTC+CGG | 0.366662 | 2_4:-40490402 | None:intergenic |
| TTGTAAGCTTGTTTCCATAT+AGG | 0.366689 | 2_4:-40491980 | None:intergenic |
| GGCTCATCAGGAGTCCATTC+AGG | 0.370563 | 2_4:-40493053 | None:intergenic |
| TCTTGCAGGTATTATTCTTA+AGG | 0.373169 | 2_4:+40492188 | Msa0328290:CDS |
| CGGAATTCTACTCGCCGCTT+CGG | 0.374406 | 2_4:+40490374 | Msa0328290:CDS |
| GTTGAAGAAATCACAACCTT+TGG | 0.377369 | 2_4:-40497348 | None:intergenic |
| CTCGCCGCCGTCGAAGGTTT+CGG | 0.378738 | 2_4:-40490442 | None:intergenic |
| CTTTCCCTTTCAGAATTTAG+TGG | 0.379886 | 2_4:+40491950 | Msa0328290:intron |
| AAAGGTGCCACTCTAAAGTT+TGG | 0.383885 | 2_4:-40493502 | None:intergenic |
| GGAATTCTACTCGCCGCTTC+GGG | 0.384701 | 2_4:+40490375 | Msa0328290:CDS |
| TGAACAACCTGCTTTATTCC+AGG | 0.384791 | 2_4:+40496383 | Msa0328290:CDS |
| GATGTGTGTGGATATTGATT+TGG | 0.393550 | 2_4:+40491111 | Msa0328290:CDS |
| TTGCAAGCTCGTGTACAATC+AGG | 0.394641 | 2_4:-40497287 | None:intergenic |
| GAAGACTTCGCCAAAGTTCA+CGG | 0.397878 | 2_4:+40490354 | Msa0328290:CDS |
| GGACTTGCCTGCTAGATTCC+CGG | 0.398457 | 2_4:+40491306 | Msa0328290:CDS |
| TGTTGATGATGATGATGTTT+CGG | 0.400062 | 2_4:+40491156 | Msa0328290:CDS |
| TTCTTCCTCGCCTTCCTGAA+TGG | 0.401426 | 2_4:+40493039 | Msa0328290:CDS |
| CATTAATCAATTTCCATTTG+AGG | 0.403628 | 2_4:+40495830 | Msa0328290:CDS |
| GAATTATAAATCTCCAGTTC+TGG | 0.404024 | 2_4:-40492216 | None:intergenic |
| GAGAAGGACTAGACAACCTT+TGG | 0.406467 | 2_4:+40496250 | Msa0328290:CDS |
| CTTTCGTACTTGAACATTCG+TGG | 0.406787 | 2_4:+40492686 | Msa0328290:CDS |
| CGGTCATGAATAGGCTCATC+AGG | 0.408012 | 2_4:-40493065 | None:intergenic |
| CCAACATCAAGGGCAATTTA+CGG | 0.409401 | 2_4:+40497014 | Msa0328290:CDS |
| CCATTTAGTTCAGAAATGTT+TGG | 0.413238 | 2_4:-40492963 | None:intergenic |
| AGCAAGTTTGGTTATTTGGC+TGG | 0.415473 | 2_4:+40497605 | Msa0328290:three_prime_UTR |
| GGTTCGGAGCATGCACCCTT+TGG | 0.416642 | 2_4:+40496437 | Msa0328290:CDS |
| GCCACATTGCACTTATAATA+CGG | 0.416942 | 2_4:-40493085 | None:intergenic |
| CTCTCAGAGGACTGCACAGT+GGG | 0.420225 | 2_4:-40494159 | None:intergenic |
| GGTTAGTGTTGTAGAAATGT+TGG | 0.423832 | 2_4:+40491186 | Msa0328290:CDS |
| ATAATCCGACTCATGGAAAC+TGG | 0.425940 | 2_4:+40496336 | Msa0328290:CDS |
| CTTATAATACGGTCATGAAT+AGG | 0.427782 | 2_4:-40493074 | None:intergenic |
| ATGAATTTGGTTCTGCTTTG+CGG | 0.431191 | 2_4:+40493467 | Msa0328290:CDS |
| CTCTTGCTTACGTTCATTGG+AGG | 0.433275 | 2_4:+40492763 | Msa0328290:CDS |
| ATAACAAACAGCGGTAATAA+TGG | 0.433806 | 2_4:+40497628 | Msa0328290:three_prime_UTR |
| TTGAGATGGTTGGAGCTTGA+TGG | 0.434714 | 2_4:+40491250 | Msa0328290:CDS |
| CGAAAGGGATGGCAAACAAA+TGG | 0.435231 | 2_4:-40492669 | None:intergenic |
| CTTGGATAAAATAGTTCTCT+GGG | 0.435795 | 2_4:-40493995 | None:intergenic |
| AAGAGATTCCAGAATTTCAA+TGG | 0.443802 | 2_4:-40492940 | None:intergenic |
| GTAACTGAGCTTTGCTCCAA+TGG | 0.447485 | 2_4:-40492713 | None:intergenic |
| CACAAGCAATTTCGGGGAGT+GGG | 0.449915 | 2_4:+40492245 | Msa0328290:CDS |
| ATTAAAGCCTTCTTCGACAA+CGG | 0.451459 | 2_4:+40497454 | Msa0328290:three_prime_UTR |
| TATGACATGGATATCGTTGT+TGG | 0.452356 | 2_4:+40497311 | Msa0328290:CDS |
| TCTCTTCGCAAGGTTCGATC+TGG | 0.454357 | 2_4:-40490470 | None:intergenic |
| TGATCTCCGTTATGTAGTAC+TGG | 0.455881 | 2_4:+40496416 | Msa0328290:CDS |
| AGGTTTCGGTGGAGAGTTTG+TGG | 0.460242 | 2_4:-40490428 | None:intergenic |
| CTTCTTCGACAACGGACTAC+AGG | 0.461269 | 2_4:+40497462 | Msa0328290:three_prime_UTR |
| GATGTTGGACTATGCATCTC+AGG | 0.462658 | 2_4:-40496999 | None:intergenic |
| TTTAGCAGAAACAATTCAAA+AGG | 0.464036 | 2_4:+40495875 | Msa0328290:CDS |
| TTACCAACCTCTAGTAACTT+AGG | 0.465893 | 2_4:-40497068 | None:intergenic |
| ATGACAAGACAAGCCTCAAA+TGG | 0.465912 | 2_4:-40495843 | None:intergenic |
| ATTCCTGTCAGATTGTTTCT+GGG | 0.469381 | 2_4:+40496464 | Msa0328290:CDS |
| CCCTCTGGCATGAAAAGAAA+AGG | 0.470377 | 2_4:-40493520 | None:intergenic |
| TCCGTTATGTAGTACTGGTT+CGG | 0.471117 | 2_4:+40496421 | Msa0328290:CDS |
| GTTCGAGAGGTGAAAGAGAA+AGG | 0.471606 | 2_4:+40491217 | Msa0328290:CDS |
| TTTATCTTGCTTCAGGCACA+TGG | 0.472517 | 2_4:+40496147 | Msa0328290:intron |
| TGTGGAAGAGACGGCGGTGG+AGG | 0.472903 | 2_4:-40490410 | None:intergenic |
| CACAGTGGGTGGTATTAAAC+TGG | 0.473738 | 2_4:-40494145 | None:intergenic |
| ATTGAACCAAGCAGTAAGTC+TGG | 0.478752 | 2_4:-40493970 | None:intergenic |
| ATCTCTTGCAGTTAAATGGT+TGG | 0.478877 | 2_4:+40496914 | Msa0328290:intron |
| TCACAAGCAATTTCGGGGAG+TGG | 0.481347 | 2_4:+40492244 | Msa0328290:CDS |
| TGGATATACATGCAAGAGTA+AGG | 0.489710 | 2_4:+40496934 | Msa0328290:CDS |
| CTGTAGTCCGTTGTCGAAGA+AGG | 0.490502 | 2_4:-40497461 | None:intergenic |
| TATAATATGGACCTGCGTAC+AGG | 0.490503 | 2_4:+40495761 | Msa0328290:CDS |
| CAACCTCTAGTAACTTAGGT+TGG | 0.493695 | 2_4:-40497064 | None:intergenic |
| CCGTAAATTGCCCTTGATGT+TGG | 0.495083 | 2_4:-40497014 | None:intergenic |
| CGATATTCCTGGTCCTCTTG+GGG | 0.503309 | 2_4:+40492911 | Msa0328290:CDS |
| GAAATGCTCGCCGCCGTCGA+AGG | 0.504521 | 2_4:-40490448 | None:intergenic |
| GAACATTCGTGGAAATCCAT+TGG | 0.506538 | 2_4:+40492697 | Msa0328290:CDS |
| GAGTAGAATTCCGTGAACTT+TGG | 0.507996 | 2_4:-40490364 | None:intergenic |
| CAGATTACAATTGACTAACC+TGG | 0.515300 | 2_4:-40497405 | None:intergenic |
| AGAAGTATTCGCCCACATGA+TGG | 0.518087 | 2_4:+40494183 | Msa0328290:CDS |
| AGGCACATGGATCTCCTCAA+TGG | 0.518425 | 2_4:+40496160 | Msa0328290:intron |
| TTGGACCAGTTTCCATGAGT+CGG | 0.519542 | 2_4:-40496341 | None:intergenic |
| TCCATGAGTCGGATTATGGC+TGG | 0.520674 | 2_4:-40496330 | None:intergenic |
| TGATGATGTTTCGGGAGAGA+AGG | 0.520808 | 2_4:+40491165 | Msa0328290:CDS |
| CTCATGCGATTCTCTTCGCA+AGG | 0.523435 | 2_4:-40490480 | None:intergenic |
| GAAAGGGATGGCAAACAAAT+GGG | 0.527047 | 2_4:-40492668 | None:intergenic |
| TGAGTTTCAAGATTATAAGT+AGG | 0.529055 | 2_4:-40496189 | None:intergenic |
| CCCATCCTCTCTGCTAATCC+CGG | 0.529775 | 2_4:-40491082 | None:intergenic |
| CCTTTCCAAACATTCCGTGT+TGG | 0.533360 | 2_4:-40493891 | None:intergenic |
| TACAGTAGTATCAATAGTGC+GGG | 0.533708 | 2_4:-40496295 | None:intergenic |
| ATCAAATTTAAACATCTCAA+AGG | 0.534502 | 2_4:+40492026 | Msa0328290:CDS |
| GCCGATGCTAGATTGCCCTC+TGG | 0.535309 | 2_4:-40493535 | None:intergenic |
| ACCTTTGGATCTTAAAACCC+TGG | 0.538572 | 2_4:+40496265 | Msa0328290:CDS |
| GAAGTATTCGCCCACATGAT+GGG | 0.539104 | 2_4:+40494184 | Msa0328290:CDS |
| TGTAGAAATGTTGGAGAGTG+AGG | 0.539327 | 2_4:+40491195 | Msa0328290:CDS |
| AGTTAGACGAAACCTCTGTA+TGG | 0.539543 | 2_4:+40493144 | Msa0328290:CDS |
| TTAAACATCTCAAAGGACTC+TGG | 0.541086 | 2_4:+40492033 | Msa0328290:CDS |
| CACGAATGTTCAAGTACGAA+AGG | 0.541790 | 2_4:-40492685 | None:intergenic |
| TCCGGGATTAGCAGAGAGGA+TGG | 0.541813 | 2_4:+40491081 | Msa0328290:CDS |
| GAACAACCTGCTTTATTCCA+GGG | 0.542789 | 2_4:+40496384 | Msa0328290:CDS |
| TTACTGACCGGGAATCTAGC+AGG | 0.542860 | 2_4:-40491313 | None:intergenic |
| ATGGATATCGTTGTTGGAGA+AGG | 0.543040 | 2_4:+40497317 | Msa0328290:CDS |
| GGATAATTCTAGGTACGTGA+TGG | 0.545152 | 2_4:+40493444 | Msa0328290:intron |
| AGAAGAAGAAATGGTAGCAA+TGG | 0.546649 | 2_4:+40490302 | None:intergenic |
| CAGCTTGATCAGCATTAGAT+GGG | 0.548839 | 2_4:-40492305 | None:intergenic |
| TGCAAGCTCGTGTACAATCA+GGG | 0.549178 | 2_4:-40497286 | None:intergenic |
| GCATCCAAAATATTGGAAAG+TGG | 0.551382 | 2_4:+40492993 | Msa0328290:CDS |
| GTTTGTGGAAGAGACGGCGG+TGG | 0.553090 | 2_4:-40490413 | None:intergenic |
| CGTAAAGGACGCCCATCATG+TGG | 0.553316 | 2_4:-40494195 | None:intergenic |
| GTTGGAGAGTGAGGTTCGAG+AGG | 0.553772 | 2_4:+40491204 | Msa0328290:CDS |
| ATATCTGTGTATACCCGTAA+AGG | 0.555996 | 2_4:-40494210 | None:intergenic |
| AACTTTGGCGAAGTCTTCGA+AGG | 0.557163 | 2_4:-40490349 | None:intergenic |
| GTTCTGCCAGACTTACTGCT+TGG | 0.561878 | 2_4:+40493964 | Msa0328290:CDS |
| GATCTTAAAACCCTGGAACA+TGG | 0.564811 | 2_4:+40496272 | Msa0328290:CDS |
| CTTACCAATTCTGAAGAACT+GGG | 0.565554 | 2_4:-40492067 | None:intergenic |
| ATCGGTGTTTCAGGCAGCTG+CGG | 0.566183 | 2_4:+40496968 | Msa0328290:CDS |
| TGACGGTACATTGAGATGGT+TGG | 0.567506 | 2_4:+40491240 | Msa0328290:CDS |
| TCCACCGAAACCTTCGACGG+CGG | 0.568274 | 2_4:+40490438 | Msa0328290:CDS |
| ACCAGCCATAATCCGACTCA+TGG | 0.571309 | 2_4:+40496329 | Msa0328290:CDS |
| ATACCCAGAAACAATCTGAC+AGG | 0.581860 | 2_4:-40496467 | None:intergenic |
| AGATGCATAGTCCAACATCA+AGG | 0.583143 | 2_4:+40497003 | Msa0328290:CDS |
| ACGAATGTTCAAGTACGAAA+GGG | 0.584367 | 2_4:-40492684 | None:intergenic |
| GTGGAAGAGACGGCGGTGGA+GGG | 0.585364 | 2_4:-40490409 | None:intergenic |
| GGTTGATGAGGAGTTGAAGA+AGG | 0.587491 | 2_4:+40495782 | Msa0328290:CDS |
| AACAACCTGCTTTATTCCAG+GGG | 0.587507 | 2_4:+40496385 | Msa0328290:CDS |
| TTTCCAACCTAAGTTACTAG+AGG | 0.588700 | 2_4:+40497061 | Msa0328290:CDS |
| GAGGAGTTGAAGAAGGCCAC+GGG | 0.591379 | 2_4:+40495789 | Msa0328290:CDS |
| TTGCGCAGAGATATATGGAA+AGG | 0.594711 | 2_4:+40492278 | Msa0328290:CDS |
| CCGACTTGTTAGAGCTGCTG+AGG | 0.595289 | 2_4:+40492735 | Msa0328290:CDS |
| GCCGCCGTCGAAGGTTTCGG+TGG | 0.597756 | 2_4:-40490439 | None:intergenic |
| GCCAGAGGGCAATCTAGCAT+CGG | 0.598031 | 2_4:+40493534 | Msa0328290:CDS |
| TGAGGAGTTGAAGAAGGCCA+CGG | 0.599213 | 2_4:+40495788 | Msa0328290:CDS |
| GGAGAAGGAGGTATTGCCAA+AGG | 0.601959 | 2_4:+40497332 | Msa0328290:CDS |
| TTGCTGATCTGTTATTCCCG+TGG | 0.606174 | 2_4:-40495805 | None:intergenic |
| CACTTACTGATTGCAAACTC+AGG | 0.606354 | 2_4:-40494261 | None:intergenic |
| CCGGGATTAGCAGAGAGGAT+GGG | 0.606835 | 2_4:+40491082 | Msa0328290:CDS |
| AACTTTCACAAGCAATTTCG+GGG | 0.606957 | 2_4:+40492239 | Msa0328290:CDS |
| TTTCTATTCTATGGCCAACA+CGG | 0.607111 | 2_4:+40493877 | Msa0328290:CDS |
| ATAGTGCGGGCCATGTTCCA+GGG | 0.608612 | 2_4:-40496282 | None:intergenic |
| CTGACAGGAATATCTCCAAA+GGG | 0.611128 | 2_4:-40496452 | None:intergenic |
| TCTGACAGGAATATCTCCAA+AGG | 0.611646 | 2_4:-40496453 | None:intergenic |
| GGAGTCCATTCAGGAAGGCG+AGG | 0.613302 | 2_4:-40493044 | None:intergenic |
| TGGAGAGTTTGTGGAAGAGA+CGG | 0.613450 | 2_4:-40490419 | None:intergenic |
| GATAGTGAAACTGAGGTGAA+TGG | 0.613747 | 2_4:+40491133 | Msa0328290:CDS |
| GATATCGTTGTTGGAGAAGG+AGG | 0.622037 | 2_4:+40497320 | Msa0328290:CDS |
| AGTAAGGACTATGATTCGAT+CGG | 0.623174 | 2_4:+40496950 | Msa0328290:CDS |
| GCTCTCAGAGGACTGCACAG+TGG | 0.626388 | 2_4:-40494160 | None:intergenic |
| CATTCACAATCTGATCAACA+AGG | 0.628020 | 2_4:+40492374 | Msa0328290:CDS |
| GATGGGTTCTTTGATGTGTG+TGG | 0.629001 | 2_4:+40491099 | Msa0328290:CDS |
| GATGCATAGTCCAACATCAA+GGG | 0.630418 | 2_4:+40497004 | Msa0328290:CDS |
| TATTATGTACGCAAAAGAGA+AGG | 0.632002 | 2_4:+40496234 | Msa0328290:CDS |
| CTCCTCATCAACCTGTACGC+AGG | 0.634177 | 2_4:-40495772 | None:intergenic |
| TCCGAACCAGTACTACATAA+CGG | 0.635574 | 2_4:-40496422 | None:intergenic |
| CCAACACGGAATGTTTGGAA+AGG | 0.635916 | 2_4:+40493891 | Msa0328290:CDS |
| ATGTTCAAGTACGAAAGGGA+TGG | 0.635997 | 2_4:-40492680 | None:intergenic |
| GCATGTTCTCAGAATTATCG+TGG | 0.636330 | 2_4:+40496733 | Msa0328290:intron |
| TCAGAGGACTGCACAGTGGG+TGG | 0.639769 | 2_4:-40494156 | None:intergenic |
| AAGGTGACGGTACATTGAGA+TGG | 0.641533 | 2_4:+40491236 | Msa0328290:CDS |
| GTCAAGTACTCTTCCACGTG+AGG | 0.644264 | 2_4:-40494234 | None:intergenic |
| AGTGGGTGGTATTAAACTGG+TGG | 0.645039 | 2_4:-40494142 | None:intergenic |
| GACCTGCGTACAGGTTGATG+AGG | 0.645215 | 2_4:+40495770 | Msa0328290:CDS |
| AGATTAGATACACTCAGCAG+TGG | 0.646587 | 2_4:-40492333 | None:intergenic |
| TTACAGTAGTATCAATAGTG+CGG | 0.648290 | 2_4:-40496296 | None:intergenic |
| GCAATCTAGCATCGGCTGTG+AGG | 0.649411 | 2_4:+40493542 | Msa0328290:CDS |
| GAATTTGAGGAAGAACATCA+AGG | 0.650482 | 2_4:+40496793 | Msa0328290:CDS |
| ACGAGCTTGCAAATATGACA+TGG | 0.651494 | 2_4:+40497298 | Msa0328290:CDS |
| CCTCAGCAGCTCTAACAAGT+CGG | 0.652420 | 2_4:-40492735 | None:intergenic |
| CATCAGGAGTCCATTCAGGA+AGG | 0.654679 | 2_4:-40493049 | None:intergenic |
| CTCTCCACCGAAACCTTCGA+CGG | 0.658578 | 2_4:+40490435 | Msa0328290:CDS |
| GATATTCCTGGTCCTCTTGG+GGG | 0.661353 | 2_4:+40492912 | Msa0328290:CDS |
| GAGGTGAAAGAGAAAGGTGA+CGG | 0.664017 | 2_4:+40491223 | Msa0328290:CDS |
| TGATTTGGATAGTGAAACTG+AGG | 0.668818 | 2_4:+40491126 | Msa0328290:CDS |
| GGATTCCGGTAAACCCGAAG+CGG | 0.670174 | 2_4:-40490388 | None:intergenic |
| TAAGTAGGATGCAACCATTG+AGG | 0.671438 | 2_4:-40496174 | None:intergenic |
| TGATGAGCCAAACTTTAGAG+TGG | 0.680214 | 2_4:+40493495 | Msa0328290:CDS |
| ATACACAGATATACCTCACG+TGG | 0.685643 | 2_4:+40494221 | Msa0328290:CDS |
| GTAAAGGACGCCCATCATGT+GGG | 0.688444 | 2_4:-40494194 | None:intergenic |
| AAGTTCCGGGATTAGCAGAG+AGG | 0.689466 | 2_4:+40491077 | Msa0328290:CDS |
| GCGAATACTTCTGCTCTCAG+AGG | 0.689727 | 2_4:-40494172 | None:intergenic |
| GAAAGAAAATTACAGCACGC+AGG | 0.698704 | 2_4:-40497546 | None:intergenic |
| ATGAATGTCATACCATACAG+AGG | 0.704504 | 2_4:-40493156 | None:intergenic |
| TTGGATAAAATAGTTCTCTG+GGG | 0.706460 | 2_4:-40493994 | None:intergenic |
| TTTGGCTGGATAACAAACAG+CGG | 0.712994 | 2_4:+40497619 | Msa0328290:three_prime_UTR |
| AGAGTTTGTGGAAGAGACGG+CGG | 0.716886 | 2_4:-40490416 | None:intergenic |
| TAGAATCCGAAGTCAAAACG+AGG | 0.732532 | 2_4:-40490506 | None:intergenic |
| ACCGTATTATAAGTGCAATG+TGG | 0.733685 | 2_4:+40493084 | Msa0328290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAGTTATAATTTCTAT+AGG | + | chr2_4:40491373-40491392 | Msa0328290:intron | 10.0% |
| !! | CAAAATTAAATAAATAACAA+AGG | - | chr2_4:40492831-40492850 | None:intergenic | 10.0% |
| !! | ATATAAAAAAATTCGATTAT+AGG | + | chr2_4:40493663-40493682 | Msa0328290:intron | 10.0% |
| !!! | CTAATTATTTTATTATTTTC+AGG | + | chr2_4:40494089-40494108 | Msa0328290:intron | 10.0% |
| !!! | TTTTAAATAATGAATCATTT+TGG | + | chr2_4:40496114-40496133 | Msa0328290:intron | 10.0% |
| !!! | TTTAAATAATGAATCATTTT+GGG | + | chr2_4:40496115-40496134 | Msa0328290:intron | 10.0% |
| !! | TTATCACTTAATATCAATTT+AGG | - | chr2_4:40490845-40490864 | None:intergenic | 15.0% |
| !! | TCACAATTGTAAATTAAATA+AGG | - | chr2_4:40491653-40491672 | None:intergenic | 15.0% |
| !!! | TGTTAGTTTTATTTATTGTT+GGG | - | chr2_4:40493412-40493431 | None:intergenic | 15.0% |
| !!! | ATGTTAGTTTTATTTATTGT+TGG | - | chr2_4:40493413-40493432 | None:intergenic | 15.0% |
| !! | AATACATGTAATTCATAAAA+AGG | - | chr2_4:40493783-40493802 | None:intergenic | 15.0% |
| !!! | TATGAATTACATGTATTTTA+TGG | + | chr2_4:40493786-40493805 | Msa0328290:intron | 15.0% |
| !!! | TTAAATAATGAATCATTTTG+GGG | + | chr2_4:40496116-40496135 | Msa0328290:intron | 15.0% |
| !!! | TGAATTTTATGTTTTATTTC+AGG | + | chr2_4:40496550-40496569 | Msa0328290:intron | 15.0% |
| !! | AATAAATCACAAGAATATTA+AGG | + | chr2_4:40496759-40496778 | Msa0328290:CDS | 15.0% |
| !!! | ATAAAAAATTTGGTATTGAA+AGG | - | chr2_4:40497121-40497140 | None:intergenic | 15.0% |
| !!! | TAAATATTTTTTAGCAAGTT+TGG | + | chr2_4:40497593-40497612 | Msa0328290:three_prime_UTR | 15.0% |
| !! | ATCTTGAAAATAAGCTAAAA+AGG | - | chr2_4:40490684-40490703 | None:intergenic | 20.0% |
| !! | TAAATATAAGACATGATTGA+TGG | + | chr2_4:40490862-40490881 | Msa0328290:intron | 20.0% |
| !! | ATAATTGTGAGGATATTTAT+AGG | + | chr2_4:40491699-40491718 | Msa0328290:intron | 20.0% |
| !! | CAGTATTATTTAATTATCGT+CGG | + | chr2_4:40491813-40491832 | Msa0328290:intron | 20.0% |
| !! | ATCAAATTTAAACATCTCAA+AGG | + | chr2_4:40492026-40492045 | Msa0328290:CDS | 20.0% |
| !! | TAGAAAATAAGCATAACAAA+AGG | - | chr2_4:40492405-40492424 | None:intergenic | 20.0% |
| !!! | ATGCTTATTTTCTATCTTAT+TGG | + | chr2_4:40492411-40492430 | Msa0328290:intron | 20.0% |
| !!! | CTAAAAAGATTTTAAACACA+TGG | + | chr2_4:40492559-40492578 | Msa0328290:intron | 20.0% |
| !! | ATAAATAACAAAGGCAATTT+GGG | - | chr2_4:40492822-40492841 | None:intergenic | 20.0% |
| !! | AATAAATAACAAAGGCAATT+TGG | - | chr2_4:40492823-40492842 | None:intergenic | 20.0% |
| !!! | TTTTACTTGTTTTACTTTCT+TGG | + | chr2_4:40493178-40493197 | Msa0328290:intron | 20.0% |
| !! | TATGAAACATATGATCAATT+TGG | + | chr2_4:40493381-40493400 | Msa0328290:intron | 20.0% |
| !! | AGAATTATCACAAATAAAGA+GGG | - | chr2_4:40493816-40493835 | None:intergenic | 20.0% |
| !! | TAGAATTATCACAAATAAAG+AGG | - | chr2_4:40493817-40493836 | None:intergenic | 20.0% |
| !! | TTAGTAATAGAAGAATTACT+TGG | - | chr2_4:40494016-40494035 | None:intergenic | 20.0% |
| !! | AAGTAATTCTTCTATTACTA+AGG | + | chr2_4:40494015-40494034 | Msa0328290:intron | 20.0% |
| !!! | TTATTGATAACAGAAAGAAA+AGG | + | chr2_4:40494455-40494474 | Msa0328290:intron | 20.0% |
| !!! | TATTGATAACAGAAAGAAAA+GGG | + | chr2_4:40494456-40494475 | Msa0328290:intron | 20.0% |
| !! | TCTGAACTTTATTAAGAAAT+TGG | - | chr2_4:40494504-40494523 | None:intergenic | 20.0% |
| !! | AACTTTATTAACAAATTGAC+TGG | - | chr2_4:40494576-40494595 | None:intergenic | 20.0% |
| !!! | TTATTGGTTTAAATCATTGT+GGG | + | chr2_4:40494934-40494953 | Msa0328290:intron | 20.0% |
| !!! | TCTATACTTTGGAAATATAA+TGG | + | chr2_4:40494957-40494976 | Msa0328290:intron | 20.0% |
| !! | TTCAGATGAAAAATCAATTT+AGG | - | chr2_4:40495581-40495600 | None:intergenic | 20.0% |
| !!! | ATATTATATCTGCATCTTTT+GGG | - | chr2_4:40495749-40495768 | None:intergenic | 20.0% |
| !! | TTTATTCTTATGCTCTTAAA+AGG | + | chr2_4:40496510-40496529 | Msa0328290:intron | 20.0% |
| !!! | TTTATGTTTTATTTCAGGTT+AGG | + | chr2_4:40496555-40496574 | Msa0328290:intron | 20.0% |
| !! | GTTAAAACTTGATAAGAAAA+AGG | - | chr2_4:40496700-40496719 | None:intergenic | 20.0% |
| !! | AAAAATTCATCTATAGAATC+TGG | - | chr2_4:40496831-40496850 | None:intergenic | 20.0% |
| !!! | TTCTATAGATGAATTTTTAG+AGG | + | chr2_4:40496833-40496852 | Msa0328290:intron | 20.0% |
| !! | TCAAAATATATAATATGCTC+TGG | - | chr2_4:40496862-40496881 | None:intergenic | 20.0% |
| !! | TCAGGTCAATATAAAAAATT+TGG | - | chr2_4:40497131-40497150 | None:intergenic | 20.0% |
| ! | ATGGTAAGTTGTTAAAATGT+TGG | + | chr2_4:40490881-40490900 | Msa0328290:intron | 25.0% |
| ! | TGGTAAGTTGTTAAAATGTT+GGG | + | chr2_4:40490882-40490901 | Msa0328290:intron | 25.0% |
| ! | ACTCACTAATTTCTATAACT+AGG | + | chr2_4:40490985-40491004 | Msa0328290:intron | 25.0% |
| !!! | GTTTGTTTTTTTTGCTTTTG+TGG | + | chr2_4:40491038-40491057 | Msa0328290:intron | 25.0% |
| ! | TGATATGAATTGAATTTGAG+TGG | + | chr2_4:40491473-40491492 | Msa0328290:intron | 25.0% |
| !! | CAAAGTGAGTCTTATAATAA+CGG | - | chr2_4:40491529-40491548 | None:intergenic | 25.0% |
| ! | ATTTCCTTGTTCCTTAATAT+TGG | + | chr2_4:40491580-40491599 | Msa0328290:intron | 25.0% |
| ! | TTGAAAAGAGTCCAATATTA+AGG | - | chr2_4:40491594-40491613 | None:intergenic | 25.0% |
| ! | ATTTGACAGGTTTATTGTTA+TGG | + | chr2_4:40491733-40491752 | Msa0328290:intron | 25.0% |
| ! | AAGAAACGTGAAACTAAAAT+TGG | - | chr2_4:40491890-40491909 | None:intergenic | 25.0% |
| ! | ATAACTTCTTGAATCAATTC+AGG | - | chr2_4:40492008-40492027 | None:intergenic | 25.0% |
| !! | TTAAACCACATATTCCTTTT+TGG | + | chr2_4:40492113-40492132 | Msa0328290:intron | 25.0% |
| ! | AATTACTTTACTTCTAGTGA+TGG | + | chr2_4:40492162-40492181 | Msa0328290:intron | 25.0% |
| ! | CGATCAAAACATACATATAT+GGG | - | chr2_4:40492608-40492627 | None:intergenic | 25.0% |
| ! | TCGATCAAAACATACATATA+TGG | - | chr2_4:40492609-40492628 | None:intergenic | 25.0% |
| ! | TAAATAACAAAGGCAATTTG+GGG | - | chr2_4:40492821-40492840 | None:intergenic | 25.0% |
| ! | TATTTGTGCATCCAAAATAT+TGG | + | chr2_4:40492986-40493005 | Msa0328290:CDS | 25.0% |
| ! | TTGAAATACACAATTCATCA+AGG | + | chr2_4:40493269-40493288 | Msa0328290:intron | 25.0% |
| ! | TGTTTAACCATTCAAATTGT+TGG | + | chr2_4:40493346-40493365 | Msa0328290:intron | 25.0% |
| ! | GTTTAACCATTCAAATTGTT+GGG | + | chr2_4:40493347-40493366 | Msa0328290:intron | 25.0% |
| ! | CTAGAATTATCCAAAACAAT+GGG | - | chr2_4:40493436-40493455 | None:intergenic | 25.0% |
| ! | CATGTAATTCATAAAAAGGA+TGG | - | chr2_4:40493779-40493798 | None:intergenic | 25.0% |
| ! | TAACAAAAAGGAACAAAAGT+TGG | - | chr2_4:40494370-40494389 | None:intergenic | 25.0% |
| !! | AACTTTTGTTCCTTTTTGTT+AGG | + | chr2_4:40494369-40494388 | Msa0328290:intron | 25.0% |
| ! | TCTGTTATCAATAAACCTTT+CGG | - | chr2_4:40494449-40494468 | None:intergenic | 25.0% |
| !! | ATTAAGAAATTGGCTTATTC+CGG | - | chr2_4:40494494-40494513 | None:intergenic | 25.0% |
| !!! | AAAAGTGTTAGACATATCAA+AGG | - | chr2_4:40494758-40494777 | None:intergenic | 25.0% |
| !!! | CTTATTGGTTTAAATCATTG+TGG | + | chr2_4:40494933-40494952 | Msa0328290:intron | 25.0% |
| !!! | GAAGTTAATTAGTTTTGAGT+GGG | - | chr2_4:40495362-40495381 | None:intergenic | 25.0% |
| ! | ATGAAAAACATAAGATGTCA+AGG | - | chr2_4:40495620-40495639 | None:intergenic | 25.0% |
| !! | TGTTTTTCATAAAATTCCCA+TGG | + | chr2_4:40495630-40495649 | Msa0328290:intron | 25.0% |
| ! | TCATTGAATCAAATATCCAT+GGG | - | chr2_4:40495649-40495668 | None:intergenic | 25.0% |
| ! | ATCATTGAATCAAATATCCA+TGG | - | chr2_4:40495650-40495669 | None:intergenic | 25.0% |
| !! | CATATTATATCTGCATCTTT+TGG | - | chr2_4:40495750-40495769 | None:intergenic | 25.0% |
| ! | CAAAAGATGCAGATATAATA+TGG | + | chr2_4:40495748-40495767 | Msa0328290:CDS | 25.0% |
| ! | CATTAATCAATTTCCATTTG+AGG | + | chr2_4:40495830-40495849 | Msa0328290:CDS | 25.0% |
| ! | TTTAGCAGAAACAATTCAAA+AGG | + | chr2_4:40495875-40495894 | Msa0328290:CDS | 25.0% |
| ! | TAGAAATGCATAATGAAAAC+AGG | - | chr2_4:40495961-40495980 | None:intergenic | 25.0% |
| ! | ATATTTCTCTGAATGTATGA+TGG | - | chr2_4:40495992-40496011 | None:intergenic | 25.0% |
| ! | TTACAAATGAATTGAAGTGT+TGG | + | chr2_4:40496075-40496094 | Msa0328290:intron | 25.0% |
| ! | TGAGTTTCAAGATTATAAGT+AGG | - | chr2_4:40496192-40496211 | None:intergenic | 25.0% |
| !! | ATATACTTCTGGCATATTTT+TGG | - | chr2_4:40496363-40496382 | None:intergenic | 25.0% |
| ! | CTTAAAAGGTTAAACTCTAA+TGG | + | chr2_4:40496524-40496543 | Msa0328290:intron | 25.0% |
| !! | ATACTCAAAAAGACTACTTT+TGG | - | chr2_4:40496606-40496625 | None:intergenic | 25.0% |
| !! | AGAATATTAAGGATTTTGTG+AGG | + | chr2_4:40496770-40496789 | Msa0328290:CDS | 25.0% |
| !! | GAATATTAAGGATTTTGTGA+GGG | + | chr2_4:40496771-40496790 | Msa0328290:CDS | 25.0% |
| ! | TAATGCTGAATTATCTGATT+AGG | + | chr2_4:40497194-40497213 | Msa0328290:intron | 25.0% |
| !!! | TGACTTGTATTTTATATTGC+AGG | + | chr2_4:40497253-40497272 | Msa0328290:intron | 25.0% |
| !! | TCTTTTTGAATGAAATTTCC+AGG | + | chr2_4:40497387-40497406 | Msa0328290:CDS | 25.0% |
| ! | AAGTTATACATCTAATTTCC+AGG | - | chr2_4:40497502-40497521 | None:intergenic | 25.0% |
| !! | TTTTAGCAAGTTTGGTTATT+TGG | + | chr2_4:40497601-40497620 | Msa0328290:three_prime_UTR | 25.0% |
| AATATCAATTTAGGCTCGAT+TGG | - | chr2_4:40490836-40490855 | None:intergenic | 30.0% | |
| TAGTAACTGTGGTTAAATAC+AGG | + | chr2_4:40490915-40490934 | Msa0328290:intron | 30.0% | |
| AGTAACTGTGGTTAAATACA+GGG | + | chr2_4:40490916-40490935 | Msa0328290:intron | 30.0% | |
| AAATAGTCCCTAACTTTGTA+GGG | - | chr2_4:40490957-40490976 | None:intergenic | 30.0% | |
| !! | TGTTGATGATGATGATGTTT+CGG | + | chr2_4:40491156-40491175 | Msa0328290:CDS | 30.0% |
| TGATGATATGTTTCTCTCAT+TGG | + | chr2_4:40491285-40491304 | Msa0328290:CDS | 30.0% | |
| AAATCATGCTCATCAAACTT+AGG | + | chr2_4:40491438-40491457 | Msa0328290:intron | 30.0% | |
| !! | AGTCTTATAATAACGGATGA+AGG | - | chr2_4:40491522-40491541 | None:intergenic | 30.0% |
| TTTCCACATCAATAATTGTG+AGG | + | chr2_4:40491688-40491707 | Msa0328290:intron | 30.0% | |
| TATCCTCACAATTATTGATG+TGG | - | chr2_4:40491694-40491713 | None:intergenic | 30.0% | |
| ! | ACTAAATTCTGAAAGGGAAA+GGG | - | chr2_4:40491951-40491970 | None:intergenic | 30.0% |
| ! | TTGTAAGCTTGTTTCCATAT+AGG | - | chr2_4:40491983-40492002 | None:intergenic | 30.0% |
| ACTTACCAAAAAGGAATATG+TGG | - | chr2_4:40492121-40492140 | None:intergenic | 30.0% | |
| !! | TTTAGTTCTCCTTAACAACA+AGG | - | chr2_4:40492144-40492163 | None:intergenic | 30.0% |
| TCTTGCAGGTATTATTCTTA+AGG | + | chr2_4:40492188-40492207 | Msa0328290:CDS | 30.0% | |
| GAATTATAAATCTCCAGTTC+TGG | - | chr2_4:40492219-40492238 | None:intergenic | 30.0% | |
| TCAACTTTCACAAGCAATTT+CGG | + | chr2_4:40492237-40492256 | Msa0328290:CDS | 30.0% | |
| TATGCTCAAGAGATACAAAA+TGG | + | chr2_4:40492519-40492538 | Msa0328290:intron | 30.0% | |
| ! | AATTTTGTATGTCCATTCTC+TGG | + | chr2_4:40492844-40492863 | Msa0328290:intron | 30.0% |
| ! | AAATTTGCTCAAATTCCCAA+AGG | - | chr2_4:40492885-40492904 | None:intergenic | 30.0% |
| ! | GGGAATTTGAGCAAATTTTT+AGG | + | chr2_4:40492887-40492906 | Msa0328290:intron | 30.0% |
| !!! | AATTTTTAGGTCGATATTCC+TGG | + | chr2_4:40492900-40492919 | Msa0328290:intron | 30.0% |
| AAGAGATTCCAGAATTTCAA+TGG | - | chr2_4:40492943-40492962 | None:intergenic | 30.0% | |
| ! | CCATTTAGTTCAGAAATGTT+TGG | - | chr2_4:40492966-40492985 | None:intergenic | 30.0% |
| CCAAACATTTCTGAACTAAA+TGG | + | chr2_4:40492963-40492982 | Msa0328290:CDS | 30.0% | |
| ! | CTTTCCACTTTCCAATATTT+TGG | - | chr2_4:40493000-40493019 | None:intergenic | 30.0% |
| CTTATAATACGGTCATGAAT+AGG | - | chr2_4:40493077-40493096 | None:intergenic | 30.0% | |
| ! | AAACTAACATCCCATTGTTT+TGG | + | chr2_4:40493423-40493442 | Msa0328290:intron | 30.0% |
| CCTAGAATTATCCAAAACAA+TGG | - | chr2_4:40493437-40493456 | None:intergenic | 30.0% | |
| !!! | CCATTGTTTTGGATAATTCT+AGG | + | chr2_4:40493434-40493453 | Msa0328290:intron | 30.0% |
| GTAATTCATAAAAAGGATGG+AGG | - | chr2_4:40493776-40493795 | None:intergenic | 30.0% | |
| ATAGAAAAGCTGTGAAAAGT+GGG | - | chr2_4:40493864-40493883 | None:intergenic | 30.0% | |
| AATAGAAAAGCTGTGAAAAG+TGG | - | chr2_4:40493865-40493884 | None:intergenic | 30.0% | |
| ! | TTCACAGCTTTTCTATTCTA+TGG | + | chr2_4:40493868-40493887 | Msa0328290:intron | 30.0% |
| TTGGATAAAATAGTTCTCTG+GGG | - | chr2_4:40493997-40494016 | None:intergenic | 30.0% | |
| CTTGGATAAAATAGTTCTCT+GGG | - | chr2_4:40493998-40494017 | None:intergenic | 30.0% | |
| ACTTGGATAAAATAGTTCTC+TGG | - | chr2_4:40493999-40494018 | None:intergenic | 30.0% | |
| TTCAAAGCAACCTAACAAAA+AGG | - | chr2_4:40494382-40494401 | None:intergenic | 30.0% | |
| !! | TTGTTAGGTTGCTTTGAAAA+AGG | + | chr2_4:40494384-40494403 | Msa0328290:intron | 30.0% |
| TTCGGTTATCAATAAACTCA+GGG | - | chr2_4:40494431-40494450 | None:intergenic | 30.0% | |
| TTTCGGTTATCAATAAACTC+AGG | - | chr2_4:40494432-40494451 | None:intergenic | 30.0% | |
| ! | TGAGTTTATTGATAACCGAA+AGG | + | chr2_4:40494431-40494450 | Msa0328290:intron | 30.0% |
| GAATCTATAAATAGCTTCTC+CGG | - | chr2_4:40494543-40494562 | None:intergenic | 30.0% | |
| !! | AACAAATTGACTGGCTTATT+CGG | - | chr2_4:40494567-40494586 | None:intergenic | 30.0% |
| ! | AAAGGATTGACTCCAAATAT+AGG | - | chr2_4:40494740-40494759 | None:intergenic | 30.0% |
| TCTAATACTCACTCTCTTAT+TGG | + | chr2_4:40494918-40494937 | Msa0328290:intron | 30.0% | |
| AAATTCAAGAAGATTTGCAG+AGG | - | chr2_4:40495119-40495138 | None:intergenic | 30.0% | |
| !! | ATAGGTACTGGTTCAATATA+TGG | + | chr2_4:40495196-40495215 | Msa0328290:intron | 30.0% |
| ! | AATATATGGAGGCATACAAA+TGG | + | chr2_4:40495210-40495229 | Msa0328290:intron | 30.0% |
| !!! | GGAAGTTAATTAGTTTTGAG+TGG | - | chr2_4:40495363-40495382 | None:intergenic | 30.0% |
| TTAGTTAGGCTGTTTAATAG+AGG | - | chr2_4:40495399-40495418 | None:intergenic | 30.0% | |
| GTTAGAGTGGTTAATTAGTT+AGG | - | chr2_4:40495413-40495432 | None:intergenic | 30.0% | |
| TGATGTAAGCTTTCCTAATT+GGG | + | chr2_4:40495483-40495502 | Msa0328290:intron | 30.0% | |
| !!! | ATAATGAATCATTTTGGGGT+TGG | + | chr2_4:40496120-40496139 | Msa0328290:intron | 30.0% |
| !!! | TAATGAATCATTTTGGGGTT+GGG | + | chr2_4:40496121-40496140 | Msa0328290:intron | 30.0% |
| TATTATGTACGCAAAAGAGA+AGG | + | chr2_4:40496234-40496253 | Msa0328290:CDS | 30.0% | |
| TTACAGTAGTATCAATAGTG+CGG | - | chr2_4:40496299-40496318 | None:intergenic | 30.0% | |
| AGCTAACAACCAATATTCTT+TGG | + | chr2_4:40496580-40496599 | Msa0328290:CDS | 30.0% | |
| ! | TACTTTTGGCCAAAGAATAT+TGG | - | chr2_4:40496592-40496611 | None:intergenic | 30.0% |
| TGAAACTCATTTCACTGTTA+TGG | + | chr2_4:40496625-40496644 | Msa0328290:CDS | 30.0% | |
| CATCTTGTTGCTAAACAATA+TGG | - | chr2_4:40496664-40496683 | None:intergenic | 30.0% | |
| TTGTTTAGCAACAAGATGTT+TGG | + | chr2_4:40496666-40496685 | Msa0328290:intron | 30.0% | |
| ATTCTTGAATCAAGATGTTC+AGG | - | chr2_4:40497149-40497168 | None:intergenic | 30.0% | |
| ATGTAATGCGATAATTCGTA+TGG | - | chr2_4:40497230-40497249 | None:intergenic | 30.0% | |
| ATAACAAACAGCGGTAATAA+TGG | + | chr2_4:40497628-40497647 | Msa0328290:three_prime_UTR | 30.0% | |
| TGAAGAATGTGAAGAAGGTT+GGG | - | chr2_4:40490605-40490624 | None:intergenic | 35.0% | |
| ! | GACTAACTTGATAGTAACTG+TGG | + | chr2_4:40490904-40490923 | Msa0328290:intron | 35.0% |
| CAAATAGTCCCTAACTTTGT+AGG | - | chr2_4:40490958-40490977 | None:intergenic | 35.0% | |
| CTACAAAGTTAGGGACTATT+TGG | + | chr2_4:40490956-40490975 | Msa0328290:intron | 35.0% | |
| !!! | ATTTTAGTTGCGTGAAGTTC+CGG | + | chr2_4:40491063-40491082 | Msa0328290:intron | 35.0% |
| ! | GATGTGTGTGGATATTGATT+TGG | + | chr2_4:40491111-40491130 | Msa0328290:CDS | 35.0% |
| ! | TGATTTGGATAGTGAAACTG+AGG | + | chr2_4:40491126-40491145 | Msa0328290:CDS | 35.0% |
| !! | GTTGATGATGATGATGTTTC+GGG | + | chr2_4:40491157-40491176 | Msa0328290:CDS | 35.0% |
| GGTTAGTGTTGTAGAAATGT+TGG | + | chr2_4:40491186-40491205 | Msa0328290:CDS | 35.0% | |
| ACAGATTAAGAGTTACTGAC+CGG | - | chr2_4:40491328-40491347 | None:intergenic | 35.0% | |
| ATTGAATTTGAGTGGCAAGA+TGG | + | chr2_4:40491481-40491500 | Msa0328290:intron | 35.0% | |
| GAGTCCAATATTAAGGAACA+AGG | - | chr2_4:40491587-40491606 | None:intergenic | 35.0% | |
| GGAAGTAACACAAATTTGAC+AGG | + | chr2_4:40491720-40491739 | Msa0328290:intron | 35.0% | |
| ! | CTTGCAACATCTAGAATAAC+GGG | - | chr2_4:40491867-40491886 | None:intergenic | 35.0% |
| ! | GCTTGCAACATCTAGAATAA+CGG | - | chr2_4:40491868-40491887 | None:intergenic | 35.0% |
| ! | CTAAATTCTGAAAGGGAAAG+GGG | - | chr2_4:40491950-40491969 | None:intergenic | 35.0% |
| ! | CACTAAATTCTGAAAGGGAA+AGG | - | chr2_4:40491952-40491971 | None:intergenic | 35.0% |
| CTTTCCCTTTCAGAATTTAG+TGG | + | chr2_4:40491950-40491969 | Msa0328290:intron | 35.0% | |
| ! | AGTGCCACTAAATTCTGAAA+GGG | - | chr2_4:40491957-40491976 | None:intergenic | 35.0% |
| ! | AAGTGCCACTAAATTCTGAA+AGG | - | chr2_4:40491958-40491977 | None:intergenic | 35.0% |
| TTAAACATCTCAAAGGACTC+TGG | + | chr2_4:40492033-40492052 | Msa0328290:CDS | 35.0% | |
| ATAACCCAGTTCTTCAGAAT+TGG | + | chr2_4:40492063-40492082 | Msa0328290:CDS | 35.0% | |
| ! | CTTACCAATTCTGAAGAACT+GGG | - | chr2_4:40492070-40492089 | None:intergenic | 35.0% |
| ! | ACTTACCAATTCTGAAGAAC+TGG | - | chr2_4:40492071-40492090 | None:intergenic | 35.0% |
| ACAACAAGGACTTACCAAAA+AGG | - | chr2_4:40492130-40492149 | None:intergenic | 35.0% | |
| !! | TTGGTAAGTCCTTGTTGTTA+AGG | + | chr2_4:40492132-40492151 | Msa0328290:intron | 35.0% |
| CAACTTTCACAAGCAATTTC+GGG | + | chr2_4:40492238-40492257 | Msa0328290:CDS | 35.0% | |
| AACTTTCACAAGCAATTTCG+GGG | + | chr2_4:40492239-40492258 | Msa0328290:CDS | 35.0% | |
| CATTCACAATCTGATCAACA+AGG | + | chr2_4:40492374-40492393 | Msa0328290:CDS | 35.0% | |
| !! | ATTTTGACGATTCCCTCATT+TGG | + | chr2_4:40492632-40492651 | Msa0328290:intron | 35.0% |
| GAAAAGTCCTAACCAAATGA+GGG | - | chr2_4:40492647-40492666 | None:intergenic | 35.0% | |
| TGAAAAGTCCTAACCAAATG+AGG | - | chr2_4:40492648-40492667 | None:intergenic | 35.0% | |
| ACGAATGTTCAAGTACGAAA+GGG | - | chr2_4:40492687-40492706 | None:intergenic | 35.0% | |
| ATTCTCTTGCTTACGTTCAT+TGG | + | chr2_4:40492760-40492779 | Msa0328290:CDS | 35.0% | |
| GCATCCAAAATATTGGAAAG+TGG | + | chr2_4:40492993-40493012 | Msa0328290:CDS | 35.0% | |
| ACCGTATTATAAGTGCAATG+TGG | + | chr2_4:40493084-40493103 | Msa0328290:CDS | 35.0% | |
| GCCACATTGCACTTATAATA+CGG | - | chr2_4:40493088-40493107 | None:intergenic | 35.0% | |
| ATGAATGTCATACCATACAG+AGG | - | chr2_4:40493159-40493178 | None:intergenic | 35.0% | |
| TACTGACCCAACAATTTGAA+TGG | - | chr2_4:40493356-40493375 | None:intergenic | 35.0% | |
| !! | ATGAATTTGGTTCTGCTTTG+CGG | + | chr2_4:40493467-40493486 | Msa0328290:CDS | 35.0% |
| GTCATTAATATGAGCTACAC+AGG | - | chr2_4:40493734-40493753 | None:intergenic | 35.0% | |
| TTTCTATTCTATGGCCAACA+CGG | + | chr2_4:40493877-40493896 | Msa0328290:CDS | 35.0% | |
| ! | TGTACCACACGAAAGTTTTA+GGG | + | chr2_4:40494056-40494075 | Msa0328290:intron | 35.0% |
| !!! | GAAAGTTTTAGGGAAGTTTG+AGG | + | chr2_4:40494066-40494085 | Msa0328290:intron | 35.0% |
| ATATCTGTGTATACCCGTAA+AGG | - | chr2_4:40494213-40494232 | None:intergenic | 35.0% | |
| CAAAAAGGAACAAAAGTTGG+AGG | - | chr2_4:40494367-40494386 | None:intergenic | 35.0% | |
| AAGTTCAGAATGCCTAATCT+AGG | + | chr2_4:40494515-40494534 | Msa0328290:intron | 35.0% | |
| AGTTCAGAATGCCTAATCTA+GGG | + | chr2_4:40494516-40494535 | Msa0328290:intron | 35.0% | |
| !! | ACAAATTGACTGGCTTATTC+GGG | - | chr2_4:40494566-40494585 | None:intergenic | 35.0% |
| AAGTTCAGAATGCCTAATCT+AGG | + | chr2_4:40494515-40494534 | Msa0328290:intron | 35.0% | |
| AGTTCAGAATGCCTAATCTA+GGG | + | chr2_4:40494516-40494535 | Msa0328290:intron | 35.0% | |
| ATGGTGATCATTCTGAATTC+TGG | + | chr2_4:40494704-40494723 | Msa0328290:intron | 35.0% | |
| GGTCACTTACTACCTATATT+TGG | + | chr2_4:40494725-40494744 | Msa0328290:intron | 35.0% | |
| TAACAATCCTAAGGAAACCT+GGG | - | chr2_4:40494833-40494852 | None:intergenic | 35.0% | |
| TTAACAATCCTAAGGAAACC+TGG | - | chr2_4:40494834-40494853 | None:intergenic | 35.0% | |
| TAGCACTACTATTCCAACAT+TGG | - | chr2_4:40494873-40494892 | None:intergenic | 35.0% | |
| ATCATTGTGGGTCTATACTT+TGG | + | chr2_4:40494946-40494965 | Msa0328290:intron | 35.0% | |
| ! | TCTAGCACTCACTCTTTTAT+TGG | - | chr2_4:40495004-40495023 | None:intergenic | 35.0% |
| AGGCATACAAATGGAAAATG+AGG | + | chr2_4:40495219-40495238 | Msa0328290:intron | 35.0% | |
| AATTCCTCCTAACTTAACTC+TGG | + | chr2_4:40495254-40495273 | Msa0328290:intron | 35.0% | |
| CATTCATCCAGAGTTAAGTT+AGG | - | chr2_4:40495264-40495283 | None:intergenic | 35.0% | |
| CTAACTTAACTCTGGATGAA+TGG | + | chr2_4:40495262-40495281 | Msa0328290:intron | 35.0% | |
| !!! | ATTAGTTTTGAGTGGGACTT+AGG | - | chr2_4:40495355-40495374 | None:intergenic | 35.0% |
| TGTTAGGAAAGTTGTTAGAG+TGG | - | chr2_4:40495426-40495445 | None:intergenic | 35.0% | |
| TAGGAAAGCTTACATCAGTT+AGG | - | chr2_4:40495480-40495499 | None:intergenic | 35.0% | |
| CTGATGTAAGCTTTCCTAAT+TGG | + | chr2_4:40495482-40495501 | Msa0328290:intron | 35.0% | |
| AAGAGTTCAAGCATGTTGTT+AGG | - | chr2_4:40495515-40495534 | None:intergenic | 35.0% | |
| ! | AGCAAACTTTAAAAACGTGG+AGG | - | chr2_4:40495675-40495694 | None:intergenic | 35.0% |
| !!! | TCCACGTTTTTAAAGTTTGC+TGG | + | chr2_4:40495674-40495693 | Msa0328290:intron | 35.0% |
| ! | TCCAGCAAACTTTAAAAACG+TGG | - | chr2_4:40495678-40495697 | None:intergenic | 35.0% |
| CCAAACACATTCAAAAGAGA+GGG | - | chr2_4:40495713-40495732 | None:intergenic | 35.0% | |
| AATGTGTTTGGCTACAGTAA+AGG | + | chr2_4:40495722-40495741 | Msa0328290:intron | 35.0% | |
| TGAAAACAGGTCAGACATTT+GGG | - | chr2_4:40495948-40495967 | None:intergenic | 35.0% | |
| ATGAAAACAGGTCAGACATT+TGG | - | chr2_4:40495949-40495968 | None:intergenic | 35.0% | |
| !!! | AAGTGTTGGTTTCTCTTTTG+AGG | + | chr2_4:40496089-40496108 | Msa0328290:intron | 35.0% |
| ACTCATCTGTCTCAACTTAT+TGG | + | chr2_4:40496207-40496226 | Msa0328290:CDS | 35.0% | |
| TACAGTAGTATCAATAGTGC+GGG | - | chr2_4:40496298-40496317 | None:intergenic | 35.0% | |
| CAGGTTGTTCAATATACTTC+TGG | - | chr2_4:40496374-40496393 | None:intergenic | 35.0% | |
| TATTCCTGTCAGATTGTTTC+TGG | + | chr2_4:40496463-40496482 | Msa0328290:CDS | 35.0% | |
| ! | ATTCCTGTCAGATTGTTTCT+GGG | + | chr2_4:40496464-40496483 | Msa0328290:CDS | 35.0% |
| GAATTTGAGGAAGAACATCA+AGG | + | chr2_4:40496793-40496812 | Msa0328290:CDS | 35.0% | |
| GAAGAACATCAAGGTAATGA+GGG | + | chr2_4:40496802-40496821 | Msa0328290:intron | 35.0% | |
| CTGTATCTCTTGCAGTTAAA+TGG | + | chr2_4:40496910-40496929 | Msa0328290:intron | 35.0% | |
| ATCTCTTGCAGTTAAATGGT+TGG | + | chr2_4:40496914-40496933 | Msa0328290:intron | 35.0% | |
| TGGATATACATGCAAGAGTA+AGG | + | chr2_4:40496934-40496953 | Msa0328290:CDS | 35.0% | |
| AGTAAGGACTATGATTCGAT+CGG | + | chr2_4:40496950-40496969 | Msa0328290:CDS | 35.0% | |
| TTTCCAACCTAAGTTACTAG+AGG | + | chr2_4:40497061-40497080 | Msa0328290:CDS | 35.0% | |
| TTACCAACCTCTAGTAACTT+AGG | - | chr2_4:40497071-40497090 | None:intergenic | 35.0% | |
| TCAAATGAGAACCACTGTTT+CGG | - | chr2_4:40497094-40497113 | None:intergenic | 35.0% | |
| TATGACATGGATATCGTTGT+TGG | + | chr2_4:40497311-40497330 | Msa0328290:CDS | 35.0% | |
| GTTGAAGAAATCACAACCTT+TGG | - | chr2_4:40497351-40497370 | None:intergenic | 35.0% | |
| CAGATTACAATTGACTAACC+TGG | - | chr2_4:40497408-40497427 | None:intergenic | 35.0% | |
| ! | GTCGAAGAAGGCTTTAATTA+AGG | - | chr2_4:40497452-40497471 | None:intergenic | 35.0% |
| ATTAAAGCCTTCTTCGACAA+CGG | + | chr2_4:40497454-40497473 | Msa0328290:three_prime_UTR | 35.0% | |
| ! | TGCGTGCTGTAATTTTCTTT+CGG | + | chr2_4:40497548-40497567 | Msa0328290:three_prime_UTR | 35.0% |
| GAGTAGAATTCCGTGAACTT+TGG | - | chr2_4:40490367-40490386 | None:intergenic | 40.0% | |
| TAGAATCCGAAGTCAAAACG+AGG | - | chr2_4:40490509-40490528 | None:intergenic | 40.0% | |
| !!! | CGTTTTGACTTCGGATTCTA+TGG | + | chr2_4:40490509-40490528 | Msa0328290:CDS | 40.0% |
| ATGATCAACGAGGAAGACAT+TGG | - | chr2_4:40490544-40490563 | None:intergenic | 40.0% | |
| GTGAAGAATGTGAAGAAGGT+TGG | - | chr2_4:40490606-40490625 | None:intergenic | 40.0% | |
| TTGCGTGAAGAATGTGAAGA+AGG | - | chr2_4:40490610-40490629 | None:intergenic | 40.0% | |
| CAAAGTTAGGGACTATTTGG+TGG | + | chr2_4:40490959-40490978 | Msa0328290:intron | 40.0% | |
| !! | TTTTAGTTGCGTGAAGTTCC+GGG | + | chr2_4:40491064-40491083 | Msa0328290:intron | 40.0% |
| GATAGTGAAACTGAGGTGAA+TGG | + | chr2_4:40491133-40491152 | Msa0328290:CDS | 40.0% | |
| TGTAGAAATGTTGGAGAGTG+AGG | + | chr2_4:40491195-40491214 | Msa0328290:CDS | 40.0% | |
| CAGATTAAGAGTTACTGACC+GGG | - | chr2_4:40491327-40491346 | None:intergenic | 40.0% | |
| TTAGTGGCACTTAGCCTATA+TGG | + | chr2_4:40491966-40491985 | Msa0328290:CDS | 40.0% | |
| TCTTAAGGAGTTACCAGAAC+TGG | + | chr2_4:40492203-40492222 | Msa0328290:CDS | 40.0% | |
| TTGCGCAGAGATATATGGAA+AGG | + | chr2_4:40492278-40492297 | Msa0328290:CDS | 40.0% | |
| CAGCTTGATCAGCATTAGAT+GGG | - | chr2_4:40492308-40492327 | None:intergenic | 40.0% | |
| TCAGCTTGATCAGCATTAGA+TGG | - | chr2_4:40492309-40492328 | None:intergenic | 40.0% | |
| AGATTAGATACACTCAGCAG+TGG | - | chr2_4:40492336-40492355 | None:intergenic | 40.0% | |
| ATCTCTTGAGCATAGACTCA+AGG | - | chr2_4:40492513-40492532 | None:intergenic | 40.0% | |
| GAAAGGGATGGCAAACAAAT+GGG | - | chr2_4:40492671-40492690 | None:intergenic | 40.0% | |
| ATGTTCAAGTACGAAAGGGA+TGG | - | chr2_4:40492683-40492702 | None:intergenic | 40.0% | |
| CACGAATGTTCAAGTACGAA+AGG | - | chr2_4:40492688-40492707 | None:intergenic | 40.0% | |
| CTTTCGTACTTGAACATTCG+TGG | + | chr2_4:40492686-40492705 | Msa0328290:CDS | 40.0% | |
| GAACATTCGTGGAAATCCAT+TGG | + | chr2_4:40492697-40492716 | Msa0328290:CDS | 40.0% | |
| ! | AAACACTGGTTACCAGAGAA+TGG | - | chr2_4:40492859-40492878 | None:intergenic | 40.0% |
| ! | TTCTCTGGTAACCAGTGTTT+TGG | + | chr2_4:40492859-40492878 | Msa0328290:intron | 40.0% |
| !!! | TAACCAGTGTTTTGGCCTTT+GGG | + | chr2_4:40492867-40492886 | Msa0328290:intron | 40.0% |
| AGTTAGACGAAACCTCTGTA+TGG | + | chr2_4:40493144-40493163 | Msa0328290:CDS | 40.0% | |
| !! | CTTGGTTCTAATGTAGCACT+AGG | + | chr2_4:40493196-40493215 | Msa0328290:intron | 40.0% |
| !! | TTGACCCATTGATTCGAGTA+GGG | - | chr2_4:40493326-40493345 | None:intergenic | 40.0% |
| !! | ATTGACCCATTGATTCGAGT+AGG | - | chr2_4:40493327-40493346 | None:intergenic | 40.0% |
| GGATAATTCTAGGTACGTGA+TGG | + | chr2_4:40493444-40493463 | Msa0328290:intron | 40.0% | |
| !! | AGGTACGTGATGGATGAATT+TGG | + | chr2_4:40493454-40493473 | Msa0328290:intron | 40.0% |
| ! | TGATGAGCCAAACTTTAGAG+TGG | + | chr2_4:40493495-40493514 | Msa0328290:CDS | 40.0% |
| !! | AAAGGTGCCACTCTAAAGTT+TGG | - | chr2_4:40493505-40493524 | None:intergenic | 40.0% |
| ! | ACCTTTTCTTTTCATGCCAG+AGG | + | chr2_4:40493519-40493538 | Msa0328290:CDS | 40.0% |
| ! | CCTTTTCTTTTCATGCCAGA+GGG | + | chr2_4:40493520-40493539 | Msa0328290:CDS | 40.0% |
| CGTGACTTTCTTCTTGGTAT+TGG | + | chr2_4:40493927-40493946 | Msa0328290:CDS | 40.0% | |
| ATTGAACCAAGCAGTAAGTC+TGG | - | chr2_4:40493973-40493992 | None:intergenic | 40.0% | |
| ! | CTGTACCACACGAAAGTTTT+AGG | + | chr2_4:40494055-40494074 | Msa0328290:intron | 40.0% |
| ACTTCCCTAAAACTTTCGTG+TGG | - | chr2_4:40494063-40494082 | None:intergenic | 40.0% | |
| ATACACAGATATACCTCACG+TGG | + | chr2_4:40494221-40494240 | Msa0328290:CDS | 40.0% | |
| ! | CACTTACTGATTGCAAACTC+AGG | - | chr2_4:40494264-40494283 | None:intergenic | 40.0% |
| CTGAGTTTGCAATCAGTAAG+TGG | + | chr2_4:40494262-40494281 | Msa0328290:intron | 40.0% | |
| TCTATGCATCTGATAGACAC+TGG | + | chr2_4:40494287-40494306 | Msa0328290:intron | 40.0% | |
| ! | CTTTGAAAAAGGCACAAGCA+GGG | + | chr2_4:40494395-40494414 | Msa0328290:intron | 40.0% |
| ! | AAAAGGGTTACTTTCCTCAC+CGG | + | chr2_4:40494472-40494491 | Msa0328290:intron | 40.0% |
| GTTCAGAATGCCTAATCTAG+GGG | + | chr2_4:40494517-40494536 | Msa0328290:intron | 40.0% | |
| !! | CAAATTGACTGGCTTATTCG+GGG | - | chr2_4:40494565-40494584 | None:intergenic | 40.0% |
| ATAGGCTGTAACCCTAGATT+AGG | - | chr2_4:40494606-40494625 | None:intergenic | 40.0% | |
| CCAACATTGGTACAAGTAGT+GGG | - | chr2_4:40494860-40494879 | None:intergenic | 40.0% | |
| TCCAACATTGGTACAAGTAG+TGG | - | chr2_4:40494861-40494880 | None:intergenic | 40.0% | |
| ! | GCACTCACTCTTTTATTGGA+TGG | - | chr2_4:40495000-40495019 | None:intergenic | 40.0% |
| GCTTCGACACAGAAAATGAT+GGG | - | chr2_4:40495093-40495112 | None:intergenic | 40.0% | |
| ACACAAAGTTCCCCATTTCT+TGG | + | chr2_4:40495155-40495174 | Msa0328290:intron | 40.0% | |
| CACAAAGTTCCCCATTTCTT+GGG | + | chr2_4:40495156-40495175 | Msa0328290:intron | 40.0% | |
| TACTGAAGCTCCCAAGAAAT+GGG | - | chr2_4:40495169-40495188 | None:intergenic | 40.0% | |
| GAGCTTCAGTACTAGTTGAT+AGG | + | chr2_4:40495178-40495197 | Msa0328290:intron | 40.0% | |
| !! | CAGTACTAGTTGATAGGTAC+TGG | + | chr2_4:40495184-40495203 | Msa0328290:intron | 40.0% |
| !! | GGTACTGGTTCAATATATGG+AGG | + | chr2_4:40495199-40495218 | Msa0328290:intron | 40.0% |
| TCATCCAGAGTTAAGTTAGG+AGG | - | chr2_4:40495261-40495280 | None:intergenic | 40.0% | |
| CATATAATGATGTCTTCCCC+AGG | + | chr2_4:40495312-40495331 | Msa0328290:intron | 40.0% | |
| AATAGAGGCAAAGAAGCTAG+AGG | - | chr2_4:40495384-40495403 | None:intergenic | 40.0% | |
| AGCTTACATCAGTTAGGTCA+AGG | - | chr2_4:40495474-40495493 | None:intergenic | 40.0% | |
| ACATTCAAAAGAGAGGGAGA+AGG | - | chr2_4:40495707-40495726 | None:intergenic | 40.0% | |
| ! | CCCTCTCTTTTGAATGTGTT+TGG | + | chr2_4:40495710-40495729 | Msa0328290:intron | 40.0% |
| GCCAAACACATTCAAAAGAG+AGG | - | chr2_4:40495714-40495733 | None:intergenic | 40.0% | |
| TATAATATGGACCTGCGTAC+AGG | + | chr2_4:40495761-40495780 | Msa0328290:CDS | 40.0% | |
| ATGACAAGACAAGCCTCAAA+TGG | - | chr2_4:40495846-40495865 | None:intergenic | 40.0% | |
| ! | TGGGTGTTTTATCTTGCTTC+AGG | + | chr2_4:40496140-40496159 | Msa0328290:intron | 40.0% |
| TTTATCTTGCTTCAGGCACA+TGG | + | chr2_4:40496147-40496166 | Msa0328290:intron | 40.0% | |
| TAAGTAGGATGCAACCATTG+AGG | - | chr2_4:40496177-40496196 | None:intergenic | 40.0% | |
| ACCTTTGGATCTTAAAACCC+TGG | + | chr2_4:40496265-40496284 | Msa0328290:CDS | 40.0% | |
| !!! | TCCAGGGTTTTAAGATCCAA+AGG | - | chr2_4:40496269-40496288 | None:intergenic | 40.0% |
| GATCTTAAAACCCTGGAACA+TGG | + | chr2_4:40496272-40496291 | Msa0328290:CDS | 40.0% | |
| AGTTTCCATGAGTCGGATTA+TGG | - | chr2_4:40496337-40496356 | None:intergenic | 40.0% | |
| ATAATCCGACTCATGGAAAC+TGG | + | chr2_4:40496336-40496355 | Msa0328290:CDS | 40.0% | |
| ! | TGAACAACCTGCTTTATTCC+AGG | + | chr2_4:40496383-40496402 | Msa0328290:CDS | 40.0% |
| ! | GAACAACCTGCTTTATTCCA+GGG | + | chr2_4:40496384-40496403 | Msa0328290:CDS | 40.0% |
| ! | AACAACCTGCTTTATTCCAG+GGG | + | chr2_4:40496385-40496404 | Msa0328290:CDS | 40.0% |
| ! | TTTTTCCCCTGGAATAAAGC+AGG | - | chr2_4:40496393-40496412 | None:intergenic | 40.0% |
| TGATCTCCGTTATGTAGTAC+TGG | + | chr2_4:40496416-40496435 | Msa0328290:CDS | 40.0% | |
| !! | TCCGTTATGTAGTACTGGTT+CGG | + | chr2_4:40496421-40496440 | Msa0328290:CDS | 40.0% |
| TCCGAACCAGTACTACATAA+CGG | - | chr2_4:40496425-40496444 | None:intergenic | 40.0% | |
| CTGACAGGAATATCTCCAAA+GGG | - | chr2_4:40496455-40496474 | None:intergenic | 40.0% | |
| TCTGACAGGAATATCTCCAA+AGG | - | chr2_4:40496456-40496475 | None:intergenic | 40.0% | |
| ATACCCAGAAACAATCTGAC+AGG | - | chr2_4:40496470-40496489 | None:intergenic | 40.0% | |
| GCATGTTCTCAGAATTATCG+TGG | + | chr2_4:40496733-40496752 | Msa0328290:intron | 40.0% | |
| ! | GGATTTTGTGAGGGAATTTG+AGG | + | chr2_4:40496780-40496799 | Msa0328290:CDS | 40.0% |
| GGAAGAACATCAAGGTAATG+AGG | + | chr2_4:40496801-40496820 | Msa0328290:intron | 40.0% | |
| ! | TATGATTCGATCGGTGTTTC+AGG | + | chr2_4:40496959-40496978 | Msa0328290:CDS | 40.0% |
| AGATGCATAGTCCAACATCA+AGG | + | chr2_4:40497003-40497022 | Msa0328290:CDS | 40.0% | |
| GATGCATAGTCCAACATCAA+GGG | + | chr2_4:40497004-40497023 | Msa0328290:CDS | 40.0% | |
| CCAACATCAAGGGCAATTTA+CGG | + | chr2_4:40497014-40497033 | Msa0328290:CDS | 40.0% | |
| CAACCTCTAGTAACTTAGGT+TGG | - | chr2_4:40497067-40497086 | None:intergenic | 40.0% | |
| CAACCTAAGTTACTAGAGGT+TGG | + | chr2_4:40497065-40497084 | Msa0328290:intron | 40.0% | |
| ACGAGCTTGCAAATATGACA+TGG | + | chr2_4:40497298-40497317 | Msa0328290:CDS | 40.0% | |
| ATGGATATCGTTGTTGGAGA+AGG | + | chr2_4:40497317-40497336 | Msa0328290:CDS | 40.0% | |
| ! | GACTACAGGTTCTTTTAGCA+AGG | + | chr2_4:40497476-40497495 | Msa0328290:three_prime_UTR | 40.0% |
| GAAAGAAAATTACAGCACGC+AGG | - | chr2_4:40497549-40497568 | None:intergenic | 40.0% | |
| !! | CTGTAATTTTCTTTCGGTGC+TGG | + | chr2_4:40497554-40497573 | Msa0328290:three_prime_UTR | 40.0% |
| AGCAAGTTTGGTTATTTGGC+TGG | + | chr2_4:40497605-40497624 | Msa0328290:three_prime_UTR | 40.0% | |
| TTTGGCTGGATAACAAACAG+CGG | + | chr2_4:40497619-40497638 | Msa0328290:three_prime_UTR | 40.0% | |
| AACTTTGGCGAAGTCTTCGA+AGG | - | chr2_4:40490352-40490371 | None:intergenic | 45.0% | |
| GAAGACTTCGCCAAAGTTCA+CGG | + | chr2_4:40490354-40490373 | Msa0328290:CDS | 45.0% | |
| TGGAGAGTTTGTGGAAGAGA+CGG | - | chr2_4:40490422-40490441 | None:intergenic | 45.0% | |
| TCTTCCTCGTTGATCATGCT+TGG | + | chr2_4:40490547-40490566 | Msa0328290:intron | 45.0% | |
| AAGTCCAAGCATGATCAACG+AGG | - | chr2_4:40490554-40490573 | None:intergenic | 45.0% | |
| !! | TGAGAGCACCCTACAAAGTT+AGG | + | chr2_4:40490946-40490965 | Msa0328290:intron | 45.0% |
| !! | GAGAGCACCCTACAAAGTTA+GGG | + | chr2_4:40490947-40490966 | Msa0328290:intron | 45.0% |
| ! | GATGGGTTCTTTGATGTGTG+TGG | + | chr2_4:40491099-40491118 | Msa0328290:CDS | 45.0% |
| ! | TGATGATGTTTCGGGAGAGA+AGG | + | chr2_4:40491165-40491184 | Msa0328290:CDS | 45.0% |
| GTTCGAGAGGTGAAAGAGAA+AGG | + | chr2_4:40491217-40491236 | Msa0328290:CDS | 45.0% | |
| GAGGTGAAAGAGAAAGGTGA+CGG | + | chr2_4:40491223-40491242 | Msa0328290:CDS | 45.0% | |
| ! | AAGGTGACGGTACATTGAGA+TGG | + | chr2_4:40491236-40491255 | Msa0328290:CDS | 45.0% |
| TGACGGTACATTGAGATGGT+TGG | + | chr2_4:40491240-40491259 | Msa0328290:CDS | 45.0% | |
| TTGAGATGGTTGGAGCTTGA+TGG | + | chr2_4:40491250-40491269 | Msa0328290:CDS | 45.0% | |
| ! | ATAACGGGATCTGAGATGAC+AGG | - | chr2_4:40491852-40491871 | None:intergenic | 45.0% |
| ! | AATTCTGAAAGGGAAAGGGG+AGG | - | chr2_4:40491947-40491966 | None:intergenic | 45.0% |
| ! | TCTAGTGATGGTGATCTTGC+AGG | + | chr2_4:40492174-40492193 | Msa0328290:intron | 45.0% |
| ! | GGCTTTTGCGCAGAGATATA+TGG | + | chr2_4:40492273-40492292 | Msa0328290:CDS | 45.0% |
| GACGATTCCCTCATTTGGTT+AGG | + | chr2_4:40492637-40492656 | Msa0328290:intron | 45.0% | |
| CGAAAGGGATGGCAAACAAA+TGG | - | chr2_4:40492672-40492691 | None:intergenic | 45.0% | |
| GTAACTGAGCTTTGCTCCAA+TGG | - | chr2_4:40492716-40492735 | None:intergenic | 45.0% | |
| CTCTTGCTTACGTTCATTGG+AGG | + | chr2_4:40492763-40492782 | Msa0328290:CDS | 45.0% | |
| !!! | GTAACCAGTGTTTTGGCCTT+TGG | + | chr2_4:40492866-40492885 | Msa0328290:intron | 45.0% |
| ATTCCCAAAGGCCAAAACAC+TGG | - | chr2_4:40492873-40492892 | None:intergenic | 45.0% | |
| TCGATATTCCTGGTCCTCTT+GGG | + | chr2_4:40492910-40492929 | Msa0328290:CDS | 45.0% | |
| !! | GGGAAGTGCCATTGAAATTC+TGG | + | chr2_4:40492932-40492951 | Msa0328290:CDS | 45.0% |
| TGTGACCCTACTCGAATCAA+TGG | + | chr2_4:40493318-40493337 | Msa0328290:intron | 45.0% | |
| GTGACCCTACTCGAATCAAT+GGG | + | chr2_4:40493319-40493338 | Msa0328290:intron | 45.0% | |
| CCCTCTGGCATGAAAAGAAA+AGG | - | chr2_4:40493523-40493542 | None:intergenic | 45.0% | |
| TATGGCCAACACGGAATGTT+TGG | + | chr2_4:40493886-40493905 | Msa0328290:CDS | 45.0% | |
| CCTTTCCAAACATTCCGTGT+TGG | - | chr2_4:40493894-40493913 | None:intergenic | 45.0% | |
| CCAACACGGAATGTTTGGAA+AGG | + | chr2_4:40493891-40493910 | Msa0328290:CDS | 45.0% | |
| TGCACTCGTGACTTTCTTCT+TGG | + | chr2_4:40493921-40493940 | Msa0328290:CDS | 45.0% | |
| AGTGGGTGGTATTAAACTGG+TGG | - | chr2_4:40494145-40494164 | None:intergenic | 45.0% | |
| CACAGTGGGTGGTATTAAAC+TGG | - | chr2_4:40494148-40494167 | None:intergenic | 45.0% | |
| !! | AGAAGTATTCGCCCACATGA+TGG | + | chr2_4:40494183-40494202 | Msa0328290:CDS | 45.0% |
| ! | GAAGTATTCGCCCACATGAT+GGG | + | chr2_4:40494184-40494203 | Msa0328290:CDS | 45.0% |
| !! | GCTTTGAAAAAGGCACAAGC+AGG | + | chr2_4:40494394-40494413 | Msa0328290:intron | 45.0% |
| ! | GAAATTGGCTTATTCCGGTG+AGG | - | chr2_4:40494489-40494508 | None:intergenic | 45.0% |
| CTGGCAGTTGCCAATTAAGA+CGG | + | chr2_4:40494630-40494649 | Msa0328290:intron | 45.0% | |
| CAGGCTGTAACCGTCTTAAT+TGG | - | chr2_4:40494643-40494662 | None:intergenic | 45.0% | |
| TTCCTTGTAACTGCCTTGAC+AGG | - | chr2_4:40494662-40494681 | None:intergenic | 45.0% | |
| CTCTAGTGAGTCACAGCTTA+TGG | + | chr2_4:40494685-40494704 | Msa0328290:intron | 45.0% | |
| AAGCTTTCCCAGGTTTCCTT+AGG | + | chr2_4:40494823-40494842 | Msa0328290:intron | 45.0% | |
| GTGGGAGGTTAACAATCCTA+AGG | - | chr2_4:40494842-40494861 | None:intergenic | 45.0% | |
| ! | ACATTGGTACAAGTAGTGGG+AGG | - | chr2_4:40494857-40494876 | None:intergenic | 45.0% |
| CCCACTACTTGTACCAATGT+TGG | + | chr2_4:40494857-40494876 | Msa0328290:intron | 45.0% | |
| CGCTTCGACACAGAAAATGA+TGG | - | chr2_4:40495094-40495113 | None:intergenic | 45.0% | |
| ACTGAAGCTCCCAAGAAATG+GGG | - | chr2_4:40495168-40495187 | None:intergenic | 45.0% | |
| GTACTGAAGCTCCCAAGAAA+TGG | - | chr2_4:40495170-40495189 | None:intergenic | 45.0% | |
| CTCTGGATGAATGGTTATCC+AGG | + | chr2_4:40495271-40495290 | Msa0328290:intron | 45.0% | |
| TTATCCAGGTCAAGATGAGC+AGG | + | chr2_4:40495285-40495304 | Msa0328290:intron | 45.0% | |
| AGAGACCAGCTCAAATACCT+GGG | - | chr2_4:40495332-40495351 | None:intergenic | 45.0% | |
| TTCCTAACAGAGACTGTGCT+TGG | + | chr2_4:40495437-40495456 | Msa0328290:intron | 45.0% | |
| TGTTAGGAGCAGACCCAATT+AGG | - | chr2_4:40495499-40495518 | None:intergenic | 45.0% | |
| !! | GGTTGATGAGGAGTTGAAGA+AGG | + | chr2_4:40495782-40495801 | Msa0328290:CDS | 45.0% |
| TTGCTGATCTGTTATTCCCG+TGG | - | chr2_4:40495808-40495827 | None:intergenic | 45.0% | |
| GAGAAGGACTAGACAACCTT+TGG | + | chr2_4:40496250-40496269 | Msa0328290:CDS | 45.0% | |
| TTGGACCAGTTTCCATGAGT+CGG | - | chr2_4:40496344-40496363 | None:intergenic | 45.0% | |
| !! | GGAGATCAAACTTTTTCCCC+TGG | - | chr2_4:40496404-40496423 | None:intergenic | 45.0% |
| GATGTTGGACTATGCATCTC+AGG | - | chr2_4:40497002-40497021 | None:intergenic | 45.0% | |
| CCGTAAATTGCCCTTGATGT+TGG | - | chr2_4:40497017-40497036 | None:intergenic | 45.0% | |
| TGCAAGCTCGTGTACAATCA+GGG | - | chr2_4:40497289-40497308 | None:intergenic | 45.0% | |
| TTGCAAGCTCGTGTACAATC+AGG | - | chr2_4:40497290-40497309 | None:intergenic | 45.0% | |
| GATATCGTTGTTGGAGAAGG+AGG | + | chr2_4:40497320-40497339 | Msa0328290:CDS | 45.0% | |
| AGAGTTTGTGGAAGAGACGG+CGG | - | chr2_4:40490419-40490438 | None:intergenic | 50.0% | |
| AGGTTTCGGTGGAGAGTTTG+TGG | - | chr2_4:40490431-40490450 | None:intergenic | 50.0% | |
| TCTCTTCGCAAGGTTCGATC+TGG | - | chr2_4:40490473-40490492 | None:intergenic | 50.0% | |
| CTCATGCGATTCTCTTCGCA+AGG | - | chr2_4:40490483-40490502 | None:intergenic | 50.0% | |
| !!! | GAGACGCCTCGTTTTGACTT+CGG | + | chr2_4:40490500-40490519 | Msa0328290:CDS | 50.0% |
| ACTCTCCGACGCTTACAAAC+AGG | + | chr2_4:40490578-40490597 | Msa0328290:intron | 50.0% | |
| TGGGACCTGTTTGTAAGCGT+CGG | - | chr2_4:40490586-40490605 | None:intergenic | 50.0% | |
| ! | AAGTTCCGGGATTAGCAGAG+AGG | + | chr2_4:40491077-40491096 | Msa0328290:CDS | 50.0% |
| TTACTGACCGGGAATCTAGC+AGG | - | chr2_4:40491316-40491335 | None:intergenic | 50.0% | |
| TCACAAGCAATTTCGGGGAG+TGG | + | chr2_4:40492244-40492263 | Msa0328290:CDS | 50.0% | |
| CACAAGCAATTTCGGGGAGT+GGG | + | chr2_4:40492245-40492264 | Msa0328290:CDS | 50.0% | |
| ! | AATTTCGGGGAGTGGGCTTT+GGG | + | chr2_4:40492252-40492271 | Msa0328290:CDS | 50.0% |
| ! | CCTCAGCAGCTCTAACAAGT+CGG | - | chr2_4:40492738-40492757 | None:intergenic | 50.0% |
| GTCGATATTCCTGGTCCTCT+TGG | + | chr2_4:40492909-40492928 | Msa0328290:CDS | 50.0% | |
| CGATATTCCTGGTCCTCTTG+GGG | + | chr2_4:40492911-40492930 | Msa0328290:CDS | 50.0% | |
| GATATTCCTGGTCCTCTTGG+GGG | + | chr2_4:40492912-40492931 | Msa0328290:CDS | 50.0% | |
| TTCTTCCTCGCCTTCCTGAA+TGG | + | chr2_4:40493039-40493058 | Msa0328290:CDS | 50.0% | |
| CATCAGGAGTCCATTCAGGA+AGG | - | chr2_4:40493052-40493071 | None:intergenic | 50.0% | |
| CGGTCATGAATAGGCTCATC+AGG | - | chr2_4:40493068-40493087 | None:intergenic | 50.0% | |
| GTTCTGCCAGACTTACTGCT+TGG | + | chr2_4:40493964-40493983 | Msa0328290:CDS | 50.0% | |
| GCGAATACTTCTGCTCTCAG+AGG | - | chr2_4:40494175-40494194 | None:intergenic | 50.0% | |
| GTAAAGGACGCCCATCATGT+GGG | - | chr2_4:40494197-40494216 | None:intergenic | 50.0% | |
| !! | CACATGATGGGCGTCCTTTA+CGG | + | chr2_4:40494196-40494215 | Msa0328290:CDS | 50.0% |
| !! | ACATGATGGGCGTCCTTTAC+GGG | + | chr2_4:40494197-40494216 | Msa0328290:CDS | 50.0% |
| GTCAAGTACTCTTCCACGTG+AGG | - | chr2_4:40494237-40494256 | None:intergenic | 50.0% | |
| AGAATGCCTAATCTAGGGGC+CGG | + | chr2_4:40494521-40494540 | Msa0328290:intron | 50.0% | |
| AGGGTTACAGCCTATGTGAC+TGG | + | chr2_4:40494611-40494630 | Msa0328290:intron | 50.0% | |
| TTGGCAACTGCCAGTCACAT+AGG | - | chr2_4:40494624-40494643 | None:intergenic | 50.0% | |
| AAGACGGTTACAGCCTGTCA+AGG | + | chr2_4:40494646-40494665 | Msa0328290:intron | 50.0% | |
| AGCCTGTCAAGGCAGTTACA+AGG | + | chr2_4:40494657-40494676 | Msa0328290:intron | 50.0% | |
| AACCTGGGAAAGCTTCTGAG+AGG | - | chr2_4:40494818-40494837 | None:intergenic | 50.0% | |
| GTTGCCAGCATTCCTCATGT+CGG | + | chr2_4:40495044-40495063 | Msa0328290:intron | 50.0% | |
| CATTCCGACATGAGGAATGC+TGG | - | chr2_4:40495051-40495070 | None:intergenic | 50.0% | |
| TGGGTGAACATTCCGACATG+AGG | - | chr2_4:40495059-40495078 | None:intergenic | 50.0% | |
| !! | GACACAGAAAATGATGGGCG+TGG | - | chr2_4:40495088-40495107 | None:intergenic | 50.0% |
| TCATCCTGCTCATCTTGACC+TGG | - | chr2_4:40495292-40495311 | None:intergenic | 50.0% | |
| TCTTCCCCAGGTATTTGAGC+TGG | + | chr2_4:40495324-40495343 | Msa0328290:intron | 50.0% | |
| GAGACCAGCTCAAATACCTG+GGG | - | chr2_4:40495331-40495350 | None:intergenic | 50.0% | |
| GAGAGACCAGCTCAAATACC+TGG | - | chr2_4:40495333-40495352 | None:intergenic | 50.0% | |
| AGCCAAGCACAGTCTCTGTT+AGG | - | chr2_4:40495442-40495461 | None:intergenic | 50.0% | |
| TGAGGAGTTGAAGAAGGCCA+CGG | + | chr2_4:40495788-40495807 | Msa0328290:CDS | 50.0% | |
| AGGCACATGGATCTCCTCAA+TGG | + | chr2_4:40496160-40496179 | Msa0328290:intron | 50.0% | |
| ACCAGCCATAATCCGACTCA+TGG | + | chr2_4:40496329-40496348 | Msa0328290:CDS | 50.0% | |
| TCCATGAGTCGGATTATGGC+TGG | - | chr2_4:40496333-40496352 | None:intergenic | 50.0% | |
| !! | GAGGTTGGTAACCGAAACAG+TGG | + | chr2_4:40497080-40497099 | Msa0328290:intron | 50.0% |
| !! | GGAGAAGGAGGTATTGCCAA+AGG | + | chr2_4:40497332-40497351 | Msa0328290:CDS | 50.0% |
| CTGTAGTCCGTTGTCGAAGA+AGG | - | chr2_4:40497464-40497483 | None:intergenic | 50.0% | |
| !! | CTTCTTCGACAACGGACTAC+AGG | + | chr2_4:40497462-40497481 | Msa0328290:three_prime_UTR | 50.0% |
| ! | CAGGTTCTTTTAGCAAGGCC+TGG | + | chr2_4:40497481-40497500 | Msa0328290:three_prime_UTR | 50.0% |
| CGGAATTCTACTCGCCGCTT+CGG | + | chr2_4:40490374-40490393 | Msa0328290:CDS | 55.0% | |
| GGAATTCTACTCGCCGCTTC+GGG | + | chr2_4:40490375-40490394 | Msa0328290:CDS | 55.0% | |
| GGATTCCGGTAAACCCGAAG+CGG | - | chr2_4:40490391-40490410 | None:intergenic | 55.0% | |
| CTCTCCACCGAAACCTTCGA+CGG | + | chr2_4:40490435-40490454 | Msa0328290:CDS | 55.0% | |
| ! | TCCGGGATTAGCAGAGAGGA+TGG | + | chr2_4:40491081-40491100 | Msa0328290:CDS | 55.0% |
| CCCATCCTCTCTGCTAATCC+CGG | - | chr2_4:40491085-40491104 | None:intergenic | 55.0% | |
| ! | CCGGGATTAGCAGAGAGGAT+GGG | + | chr2_4:40491082-40491101 | Msa0328290:CDS | 55.0% |
| GTTGGAGAGTGAGGTTCGAG+AGG | + | chr2_4:40491204-40491223 | Msa0328290:CDS | 55.0% | |
| GGACTTGCCTGCTAGATTCC+CGG | + | chr2_4:40491306-40491325 | Msa0328290:CDS | 55.0% | |
| ! | CAATTTCGGGGAGTGGGCTT+TGG | + | chr2_4:40492251-40492270 | Msa0328290:CDS | 55.0% |
| !! | CCGACTTGTTAGAGCTGCTG+AGG | + | chr2_4:40492735-40492754 | Msa0328290:CDS | 55.0% |
| TCAATGGCACTTCCCCCAAG+AGG | - | chr2_4:40492927-40492946 | None:intergenic | 55.0% | |
| GGCTCATCAGGAGTCCATTC+AGG | - | chr2_4:40493056-40493075 | None:intergenic | 55.0% | |
| GCCAGAGGGCAATCTAGCAT+CGG | + | chr2_4:40493534-40493553 | Msa0328290:CDS | 55.0% | |
| !! | GCAATCTAGCATCGGCTGTG+AGG | + | chr2_4:40493542-40493561 | Msa0328290:CDS | 55.0% |
| CTCTCAGAGGACTGCACAGT+GGG | - | chr2_4:40494162-40494181 | None:intergenic | 55.0% | |
| CGTAAAGGACGCCCATCATG+TGG | - | chr2_4:40494198-40494217 | None:intergenic | 55.0% | |
| ! | GGGAAAGCTTCTGAGAGGTG+AGG | - | chr2_4:40494813-40494832 | None:intergenic | 55.0% |
| CACCTCTCAGAAGCTTTCCC+AGG | + | chr2_4:40494813-40494832 | Msa0328290:intron | 55.0% | |
| !! | ATGATGGGCGTGGAAGCACT+GGG | - | chr2_4:40495078-40495097 | None:intergenic | 55.0% |
| !! | AATGATGGGCGTGGAAGCAC+TGG | - | chr2_4:40495079-40495098 | None:intergenic | 55.0% |
| AGAGACTGTGCTTGGCTAGC+AGG | + | chr2_4:40495445-40495464 | Msa0328290:intron | 55.0% | |
| GAGACTGTGCTTGGCTAGCA+GGG | + | chr2_4:40495446-40495465 | Msa0328290:intron | 55.0% | |
| !! | GACCTGCGTACAGGTTGATG+AGG | + | chr2_4:40495770-40495789 | Msa0328290:CDS | 55.0% |
| CTCCTCATCAACCTGTACGC+AGG | - | chr2_4:40495775-40495794 | None:intergenic | 55.0% | |
| GAGGAGTTGAAGAAGGCCAC+GGG | + | chr2_4:40495789-40495808 | Msa0328290:CDS | 55.0% | |
| ATAGTGCGGGCCATGTTCCA+GGG | - | chr2_4:40496285-40496304 | None:intergenic | 55.0% | |
| AATAGTGCGGGCCATGTTCC+AGG | - | chr2_4:40496286-40496305 | None:intergenic | 55.0% | |
| ! | ATCGGTGTTTCAGGCAGCTG+CGG | + | chr2_4:40496968-40496987 | Msa0328290:CDS | 55.0% |
| ! | ACTCGCCGCTTCGGGTTTAC+CGG | + | chr2_4:40490383-40490402 | Msa0328290:CDS | 60.0% |
| GTTTGTGGAAGAGACGGCGG+TGG | - | chr2_4:40490416-40490435 | None:intergenic | 60.0% | |
| TCCACCGAAACCTTCGACGG+CGG | + | chr2_4:40490438-40490457 | Msa0328290:CDS | 60.0% | |
| GGAGTCCATTCAGGAAGGCG+AGG | - | chr2_4:40493047-40493066 | None:intergenic | 60.0% | |
| GCCGATGCTAGATTGCCCTC+TGG | - | chr2_4:40493538-40493557 | None:intergenic | 60.0% | |
| TCAGAGGACTGCACAGTGGG+TGG | - | chr2_4:40494159-40494178 | None:intergenic | 60.0% | |
| GCTCTCAGAGGACTGCACAG+TGG | - | chr2_4:40494163-40494182 | None:intergenic | 60.0% | |
| GCTTCTCCGGCCCCTAGATT+AGG | - | chr2_4:40494530-40494549 | None:intergenic | 60.0% | |
| GGTTCGGAGCATGCACCCTT+TGG | + | chr2_4:40496437-40496456 | Msa0328290:CDS | 60.0% | |
| AGACGGCGGTGGAGGGATTC+CGG | - | chr2_4:40490405-40490424 | None:intergenic | 65.0% | |
| GTGGAAGAGACGGCGGTGGA+GGG | - | chr2_4:40490412-40490431 | None:intergenic | 65.0% | |
| TGTGGAAGAGACGGCGGTGG+AGG | - | chr2_4:40490413-40490432 | None:intergenic | 65.0% | |
| CTCGCCGCCGTCGAAGGTTT+CGG | - | chr2_4:40490445-40490464 | None:intergenic | 65.0% | |
| GAAATGCTCGCCGCCGTCGA+AGG | - | chr2_4:40490451-40490470 | None:intergenic | 65.0% | |
| GCACTTCCCCCAAGAGGACC+AGG | - | chr2_4:40492921-40492940 | None:intergenic | 65.0% | |
| GCCGCCGTCGAAGGTTTCGG+TGG | - | chr2_4:40490442-40490461 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 40490312 | 40497653 | 40490312 | ID=Msa0328290;Name=Msa0328290 |
| chr2_4 | mRNA | 40490312 | 40497653 | 40490312 | ID=Msa0328290-mRNA-1;Parent=Msa0328290;Name=Msa0328290-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.92|0.93|1|0.92|0.93|15|208|861 |
| chr2_4 | exon | 40490312 | 40490545 | 40490312 | ID=Msa0328290-mRNA-1:exon:12407;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40491070 | 40491327 | 40491070 | ID=Msa0328290-mRNA-1:exon:12408;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40491963 | 40492084 | 40491963 | ID=Msa0328290-mRNA-1:exon:12409;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40492179 | 40492395 | 40492179 | ID=Msa0328290-mRNA-1:exon:12410;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40492659 | 40492784 | 40492659 | ID=Msa0328290-mRNA-1:exon:12411;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40492909 | 40493165 | 40492909 | ID=Msa0328290-mRNA-1:exon:12412;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40493456 | 40493563 | 40493456 | ID=Msa0328290-mRNA-1:exon:12413;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40493875 | 40494016 | 40493875 | ID=Msa0328290-mRNA-1:exon:12414;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40494111 | 40494276 | 40494111 | ID=Msa0328290-mRNA-1:exon:12415;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40495739 | 40495896 | 40495739 | ID=Msa0328290-mRNA-1:exon:12416;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40496162 | 40496485 | 40496162 | ID=Msa0328290-mRNA-1:exon:12417;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40496572 | 40496646 | 40496572 | ID=Msa0328290-mRNA-1:exon:12418;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40496745 | 40496814 | 40496745 | ID=Msa0328290-mRNA-1:exon:12419;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40496925 | 40497082 | 40496925 | ID=Msa0328290-mRNA-1:exon:12420;Parent=Msa0328290-mRNA-1 |
| chr2_4 | exon | 40497275 | 40497653 | 40497275 | ID=Msa0328290-mRNA-1:exon:12421;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40490312 | 40490545 | 40490312 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40491070 | 40491327 | 40491070 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40491963 | 40492084 | 40491963 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40492179 | 40492395 | 40492179 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40492659 | 40492784 | 40492659 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40492909 | 40493165 | 40492909 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40493456 | 40493563 | 40493456 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40493875 | 40494016 | 40493875 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40494111 | 40494276 | 40494111 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40495739 | 40495896 | 40495739 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40496162 | 40496485 | 40496162 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40496572 | 40496646 | 40496572 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40496745 | 40496814 | 40496745 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40496925 | 40497082 | 40496925 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | CDS | 40497275 | 40497445 | 40497275 | ID=Msa0328290-mRNA-1:cds;Parent=Msa0328290-mRNA-1 |
| chr2_4 | three_prime_UTR | 40497446 | 40497653 | 40497446 | ID=Msa0328290-mRNA-1:three_prime_utr;Parent=Msa0328290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
