Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328890 | GAU30101.1 | 74.413 | 426 | 98 | 2 | 2 | 416 | 3 | 428 | 0.0 | 674 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0211450 | Msa0328890 | 0.819605 | 1.063601e-52 | -8.615850e-47 |
| Msa0251980 | Msa0328890 | 0.860829 | 1.572032e-63 | -8.615850e-47 |
| Msa0290440 | Msa0328890 | 0.803365 | 3.609068e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328890 | MtrunA17_Chr2g0310431 | 93.443 | 61 | 4 | 0 | 1 | 61 | 1 | 61 | 2.42e-36 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0328890 | AT1G16290.1 | 55.422 | 415 | 174 | 1 | 1 | 415 | 1 | 404 | 4.86e-172 | 488 |
| Msa0328890 | AT1G16290.2 | 55.422 | 415 | 174 | 1 | 1 | 415 | 10 | 413 | 5.78e-172 | 488 |
Find 106 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGAGGGTTCACATTCTT+TGG | 0.184153 | 2_4:-41879709 | None:intergenic |
| TCGCTGCTGCCTATCTTAAA+TGG | 0.208213 | 2_4:+41873761 | Msa0328890:CDS |
| TGTCACATTGCCATTGTCTT+TGG | 0.222463 | 2_4:+41871594 | Msa0328890:five_prime_UTR |
| CACCTTTCCATGTGTTTCTT+TGG | 0.223630 | 2_4:-41876468 | None:intergenic |
| GGAACCACACCATTGCTTTC+AGG | 0.244557 | 2_4:-41874622 | None:intergenic |
| TGTTCAGGGAATTGGGCTTC+AGG | 0.275199 | 2_4:+41878587 | Msa0328890:intron |
| GTCAAATAAGGCTGGCCTTC+AGG | 0.281392 | 2_4:-41872468 | None:intergenic |
| TACTTACAGATTTAATCTTT+TGG | 0.302332 | 2_4:-41877718 | None:intergenic |
| GGACCAAGACCTGGAATAAT+GGG | 0.309276 | 2_4:+41878135 | Msa0328890:CDS |
| ACAAATCAACATTGCGCTAT+TGG | 0.313860 | 2_4:+41873985 | Msa0328890:CDS |
| CATGTCTTCTCGAGATGCTT+TGG | 0.317971 | 2_4:-41876399 | None:intergenic |
| GTTCCTGTTCATTCTCATAC+TGG | 0.320423 | 2_4:+41874640 | Msa0328890:CDS |
| AACCACTCGGCACTCACTTC+AGG | 0.325760 | 2_4:-41872399 | None:intergenic |
| TGGACCAAGACCTGGAATAA+TGG | 0.330346 | 2_4:+41878134 | Msa0328890:CDS |
| AATGCAGCTTACAGTGCATT+AGG | 0.331785 | 2_4:+41873673 | Msa0328890:intron |
| ATGCAAAAGATGACACATAT+TGG | 0.332150 | 2_4:+41876372 | Msa0328890:CDS |
| ATTTCAGTCTGTGTCAAATA+AGG | 0.338758 | 2_4:-41872480 | None:intergenic |
| ATCATCCCAGTAGCTGAAAT+TGG | 0.339016 | 2_4:-41872337 | None:intergenic |
| CTCAGGATGCAAGTACTCTT+TGG | 0.355544 | 2_4:+41879725 | Msa0328890:CDS |
| CAACTACTTGTTATAAACTA+TGG | 0.357307 | 2_4:+41873153 | Msa0328890:CDS |
| ATCCCCATTATTCCAGGTCT+TGG | 0.361266 | 2_4:-41878138 | None:intergenic |
| CACATTGCCATTGTCTTTGG+AGG | 0.362964 | 2_4:+41871597 | Msa0328890:five_prime_UTR |
| CGCTGCTGCCTATCTTAAAT+GGG | 0.378650 | 2_4:+41873762 | Msa0328890:CDS |
| GTTCAGGGAATTGGGCTTCA+GGG | 0.385434 | 2_4:+41878588 | Msa0328890:intron |
| TTTATTGTAAGGGCATATAA+AGG | 0.393414 | 2_4:+41873942 | Msa0328890:CDS |
| CATTTATGAAAGGCTTGAAT+AGG | 0.398844 | 2_4:-41873732 | None:intergenic |
| TGTTGATCCTCAGGATTTAG+AGG | 0.405970 | 2_4:+41872362 | Msa0328890:CDS |
| ATTTCCACCCGGGAAAGATA+TGG | 0.406385 | 2_4:-41876518 | None:intergenic |
| TGGCGGCCAATTTCAGCTAC+TGG | 0.408185 | 2_4:+41872331 | Msa0328890:CDS |
| TGCAAAAGATGACACATATT+GGG | 0.418121 | 2_4:+41876373 | Msa0328890:CDS |
| ATCCTGTAATCCGAAAAGTA+TGG | 0.424009 | 2_4:+41876438 | Msa0328890:CDS |
| TTTGAATGTTCTGCCGGAAA+AGG | 0.434853 | 2_4:-41874667 | None:intergenic |
| GAAGTGAAGAGTTTATTGTA+AGG | 0.439744 | 2_4:+41873931 | Msa0328890:CDS |
| GCAATGTGACAGGGAGAGAT+GGG | 0.445312 | 2_4:-41871582 | None:intergenic |
| AAAGACAATGGCAATGTGAC+AGG | 0.453084 | 2_4:-41871592 | None:intergenic |
| AAGTCAATCCCCATTATTCC+AGG | 0.454568 | 2_4:-41878144 | None:intergenic |
| GGCAATGTGACAGGGAGAGA+TGG | 0.457710 | 2_4:-41871583 | None:intergenic |
| AAACTGTTGAATGGTTGATA+AGG | 0.469062 | 2_4:+41873223 | Msa0328890:CDS |
| AGTTGCATAAGCCCCACATT+AGG | 0.469592 | 2_4:-41873192 | None:intergenic |
| GTGTGACACCCATTTAAGAT+AGG | 0.470676 | 2_4:-41873770 | None:intergenic |
| CAGACAGTACTTTGTGCCAT+TGG | 0.471505 | 2_4:+41878078 | Msa0328890:intron |
| TAGCTGACATTGTTATTAGC+AGG | 0.479632 | 2_4:+41872902 | Msa0328890:CDS |
| AGAAGCGACCATATCTTTCC+CGG | 0.479646 | 2_4:+41876510 | Msa0328890:CDS |
| GGATGATTGTGTTGATCCTC+AGG | 0.480334 | 2_4:+41872353 | Msa0328890:CDS |
| CCAAAGTACATGGACACAAA+TGG | 0.481197 | 2_4:-41878646 | None:intergenic |
| GCTAGCATGCGCTTTGTACA+TGG | 0.485765 | 2_4:+41878108 | Msa0328890:CDS |
| TTCGTTCAAGCATATTTCAT+AGG | 0.493578 | 2_4:+41879685 | Msa0328890:CDS |
| CCATTTGTGTCCATGTACTT+TGG | 0.494118 | 2_4:+41878646 | Msa0328890:CDS |
| GATCCAGTATGAGAATGAAC+AGG | 0.502115 | 2_4:-41874643 | None:intergenic |
| ATATAAAGGTGGTGCGAGAA+AGG | 0.512227 | 2_4:+41873956 | Msa0328890:CDS |
| GTACTTTGGTGCTGCCTATG+TGG | 0.514728 | 2_4:+41878660 | Msa0328890:CDS |
| AAGTGAAGAGTTTATTGTAA+GGG | 0.519105 | 2_4:+41873932 | Msa0328890:CDS |
| TTTCCGGCAGAACATTCAAA+AGG | 0.520644 | 2_4:+41874670 | Msa0328890:CDS |
| TCTTTCCCGGGTGGAAATGA+AGG | 0.529950 | 2_4:+41876523 | Msa0328890:CDS |
| GCGAAATACACATTTATGAA+AGG | 0.530750 | 2_4:-41873742 | None:intergenic |
| CAAAGCATCTCGAGAAGACA+TGG | 0.532373 | 2_4:+41876400 | Msa0328890:CDS |
| TTGCGGAACTTGAAAGCGAC+AGG | 0.536427 | 2_4:+41873130 | Msa0328890:CDS |
| ATAGGCAGCACCAAAGTACA+TGG | 0.540924 | 2_4:-41878656 | None:intergenic |
| CAGTCTGTGTCAAATAAGGC+TGG | 0.545568 | 2_4:-41872476 | None:intergenic |
| GGCGGCCAATTTCAGCTACT+GGG | 0.552817 | 2_4:+41872332 | Msa0328890:CDS |
| CATGGAGATGGACCAAGACC+TGG | 0.559952 | 2_4:+41878126 | Msa0328890:CDS |
| ATCCAAAGAAACACATGGAA+AGG | 0.561633 | 2_4:+41876466 | Msa0328890:CDS |
| AAATCTAAAGAGCCTAATGT+GGG | 0.561874 | 2_4:+41873180 | Msa0328890:CDS |
| ATTTGACACAGACTGAAATG+AGG | 0.564614 | 2_4:+41872484 | Msa0328890:CDS |
| TATCATTCATATGCTGCAGA+AGG | 0.565685 | 2_4:+41873697 | Msa0328890:CDS |
| AAAATCTAAAGAGCCTAATG+TGG | 0.566373 | 2_4:+41873179 | Msa0328890:CDS |
| TTGGTGCTGCCTATGTGGCA+TGG | 0.566887 | 2_4:+41878665 | Msa0328890:CDS |
| CATCTCTCTCGTGATCCTGA+AGG | 0.570844 | 2_4:+41872453 | Msa0328890:CDS |
| TTCATACCTTCATTTCCACC+CGG | 0.576364 | 2_4:-41876529 | None:intergenic |
| ACCAAAGAATGTGAACCCTC+AGG | 0.578927 | 2_4:+41879708 | Msa0328890:CDS |
| TTAAAAGCTGGCGAGGAAAG+AGG | 0.583165 | 2_4:+41872420 | Msa0328890:CDS |
| ATGCGCTTTGTACATGGAGA+TGG | 0.587432 | 2_4:+41878114 | Msa0328890:CDS |
| CATGCTAGCAACCTCTCCAA+TGG | 0.590466 | 2_4:-41878094 | None:intergenic |
| TTTGACACAGACTGAAATGA+GGG | 0.598026 | 2_4:+41872485 | Msa0328890:CDS |
| GGGCATGATTTGTGCTATTG+CGG | 0.598516 | 2_4:+41873113 | Msa0328890:intron |
| AGTGCCGAGTGGTTAAAAGC+TGG | 0.600941 | 2_4:+41872408 | Msa0328890:CDS |
| CAATGTGACAGGGAGAGATG+GGG | 0.601061 | 2_4:-41871581 | None:intergenic |
| CACATTGCCTCTAAATCCTG+AGG | 0.606507 | 2_4:-41872369 | None:intergenic |
| GAAGCGACCATATCTTTCCC+GGG | 0.606724 | 2_4:+41876511 | Msa0328890:CDS |
| AGTACTTTGTGCCATTGGAG+AGG | 0.611024 | 2_4:+41878083 | Msa0328890:CDS |
| AAAGAGTACTTGCATCCTGA+GGG | 0.611313 | 2_4:-41879723 | None:intergenic |
| ACCACACCATTGCTTTCAGG+AGG | 0.612523 | 2_4:-41874619 | None:intergenic |
| TTCTGATAACCATGCCACAT+AGG | 0.613016 | 2_4:-41878674 | None:intergenic |
| CAAAGAGTACTTGCATCCTG+AGG | 0.614254 | 2_4:-41879724 | None:intergenic |
| GAGAAGACATGGAAGCTATG+TGG | 0.614861 | 2_4:+41876411 | Msa0328890:CDS |
| GTGAATACCTCCAAAGACAA+TGG | 0.616645 | 2_4:-41871604 | None:intergenic |
| GGTTATCAGAATACGAAGGA+AGG | 0.617810 | 2_4:+41878686 | Msa0328890:CDS |
| AATGTGACAGGGAGAGATGG+GGG | 0.618297 | 2_4:-41871580 | None:intergenic |
| CTCAGGATTTAGAGGCAATG+TGG | 0.620463 | 2_4:+41872370 | Msa0328890:CDS |
| ATCATTCATATGCTGCAGAA+GGG | 0.621805 | 2_4:+41873698 | Msa0328890:CDS |
| TTGTTTGTAGTTCAGGATGG+CGG | 0.628719 | 2_4:+41872314 | Msa0328890:intron |
| TCCTCCTGAAAGCAATGGTG+TGG | 0.630570 | 2_4:+41874618 | Msa0328890:CDS |
| TGCATTATGTAATCTGACAA+TGG | 0.631432 | 2_4:+41879940 | Msa0328890:CDS |
| ATTGTAAGGGCATATAAAGG+TGG | 0.632413 | 2_4:+41873945 | Msa0328890:CDS |
| AAGACAATGGCAATGTGACA+GGG | 0.635289 | 2_4:-41871591 | None:intergenic |
| CGAGTGGTTAAAAGCTGGCG+AGG | 0.653580 | 2_4:+41872413 | Msa0328890:CDS |
| TACTCTTTGGCTAAAATACG+AGG | 0.655172 | 2_4:+41879738 | Msa0328890:CDS |
| TCATACCTTCATTTCCACCC+GGG | 0.657505 | 2_4:-41876528 | None:intergenic |
| ATTAAATCCAAAGAAACACA+TGG | 0.678264 | 2_4:+41876461 | Msa0328890:CDS |
| GACCAAGACCTGGAATAATG+GGG | 0.696661 | 2_4:+41878136 | Msa0328890:CDS |
| TCAACAAGGAATCACCTGGG+TGG | 0.700035 | 2_4:-41874038 | None:intergenic |
| GATAGTCCTCCTGAAAGCAA+TGG | 0.705488 | 2_4:+41874613 | Msa0328890:CDS |
| GCGACCATATCTTTCCCGGG+TGG | 0.707607 | 2_4:+41876514 | Msa0328890:CDS |
| AATCTAAAGAGCCTAATGTG+GGG | 0.713143 | 2_4:+41873181 | Msa0328890:CDS |
| GCATGGTTATCAGAATACGA+AGG | 0.742094 | 2_4:+41878682 | Msa0328890:CDS |
| TACCTGAAGTGAGTGCCGAG+TGG | 0.779736 | 2_4:+41872397 | Msa0328890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTAATACAAATTCATA+AGG | + | chr2_4:41871653-41871672 | Msa0328890:intron | 10.0% |
| !!! | TATTAAGATTTTATAATTTC+AGG | + | chr2_4:41873525-41873544 | Msa0328890:intron | 10.0% |
| !!! | ATTAAGATTTTATAATTTCA+GGG | + | chr2_4:41873526-41873545 | Msa0328890:intron | 10.0% |
| !!! | TTTTAAATTTATAGAAAATG+TGG | - | chr2_4:41878935-41878954 | None:intergenic | 10.0% |
| !! | AATAAATTAGAAAATTTCAA+AGG | + | chr2_4:41878955-41878974 | Msa0328890:intron | 10.0% |
| !! | AATTGAACATTAAATAAAAT+AGG | + | chr2_4:41879188-41879207 | Msa0328890:intron | 10.0% |
| !! | ATTGAACATTAAATAAAATA+GGG | + | chr2_4:41879189-41879208 | Msa0328890:intron | 10.0% |
| !!! | AAAGAAAAAAGTAAAAATTT+TGG | + | chr2_4:41879785-41879804 | Msa0328890:intron | 10.0% |
| !!! | AGCTATTTTATTTTGAATTT+TGG | + | chr2_4:41871708-41871727 | Msa0328890:intron | 15.0% |
| !!! | GCTATTTTATTTTGAATTTT+GGG | + | chr2_4:41871709-41871728 | Msa0328890:intron | 15.0% |
| !!! | CTATTTTATTTTGAATTTTG+GGG | + | chr2_4:41871710-41871729 | Msa0328890:intron | 15.0% |
| !! | TAAACACGATAAATTTATTA+GGG | - | chr2_4:41871755-41871774 | None:intergenic | 15.0% |
| !! | TTAAACACGATAAATTTATT+AGG | - | chr2_4:41871756-41871775 | None:intergenic | 15.0% |
| !!! | GTTTTTTTTTTTTGAAAACT+CGG | + | chr2_4:41871965-41871984 | Msa0328890:intron | 15.0% |
| !! | CAACAAAAATTCATAAATAA+AGG | - | chr2_4:41872224-41872243 | None:intergenic | 15.0% |
| !!! | TTAAGAATTTTGAAACTTAA+AGG | - | chr2_4:41872647-41872666 | None:intergenic | 15.0% |
| !! | AATGATTAATAACATTAAGT+TGG | - | chr2_4:41873472-41873491 | None:intergenic | 15.0% |
| !!! | TTTGAAATTTTGATAATATG+AGG | + | chr2_4:41873554-41873573 | Msa0328890:intron | 15.0% |
| !!! | TTGAAATTTTGATAATATGA+GGG | + | chr2_4:41873555-41873574 | Msa0328890:intron | 15.0% |
| !! | ATTATTTCATTGTTATGTTA+TGG | + | chr2_4:41873638-41873657 | Msa0328890:intron | 15.0% |
| !! | AAGAAATAACATGTTTAAAT+GGG | - | chr2_4:41874721-41874740 | None:intergenic | 15.0% |
| !! | TAAGAAATAACATGTTTAAA+TGG | - | chr2_4:41874722-41874741 | None:intergenic | 15.0% |
| !! | AAACAAAAGAACAATTAATT+TGG | - | chr2_4:41875526-41875545 | None:intergenic | 15.0% |
| !! | TATAAGTTTGTACTAAATTA+AGG | + | chr2_4:41875664-41875683 | Msa0328890:intron | 15.0% |
| !!! | TTAAAACTTTTAACAAACAA+AGG | - | chr2_4:41875766-41875785 | None:intergenic | 15.0% |
| !!! | TTGTTTGTTAAAAGTTTTAA+TGG | + | chr2_4:41875766-41875785 | Msa0328890:intron | 15.0% |
| !! | AGATCAATATTTATTTGAAT+TGG | - | chr2_4:41876231-41876250 | None:intergenic | 15.0% |
| !! | ATATGAAATAACCAAAATTA+AGG | - | chr2_4:41876926-41876945 | None:intergenic | 15.0% |
| !!! | TTTTACACATTAAAAACAAA+AGG | - | chr2_4:41878013-41878032 | None:intergenic | 15.0% |
| !! | TTGAACATTAAATAAAATAG+GGG | + | chr2_4:41879190-41879209 | Msa0328890:intron | 15.0% |
| !! | ATATATTTGTCAATGTTAAA+AGG | + | chr2_4:41879307-41879326 | Msa0328890:intron | 15.0% |
| !! | TACAATATAAAATTTACAAC+AGG | + | chr2_4:41879445-41879464 | Msa0328890:intron | 15.0% |
| !! | AAATTAAGTGTTTACTTAAT+AGG | + | chr2_4:41879565-41879584 | Msa0328890:intron | 15.0% |
| !!! | TAAAATTTTGCTACGTTTTA+GGG | - | chr2_4:41871912-41871931 | None:intergenic | 20.0% |
| !!! | ATAAAATTTTGCTACGTTTT+AGG | - | chr2_4:41871913-41871932 | None:intergenic | 20.0% |
| !!! | AAAACGTAGCAAAATTTTAT+AGG | + | chr2_4:41871913-41871932 | Msa0328890:intron | 20.0% |
| !! | TTTGTAAGTGTATTAAAAAG+TGG | + | chr2_4:41872756-41872775 | Msa0328890:intron | 20.0% |
| !! | AAGTGGTTTGAATTAATAAT+AGG | + | chr2_4:41872773-41872792 | Msa0328890:intron | 20.0% |
| !!! | CTCAAATTTTTTCTGTTATT+TGG | - | chr2_4:41873282-41873301 | None:intergenic | 20.0% |
| !!! | AATATCCCAAAATTATTTCT+GGG | + | chr2_4:41873362-41873381 | Msa0328890:intron | 20.0% |
| !!! | TTTTACATGTTTATCCAATT+TGG | - | chr2_4:41873614-41873633 | None:intergenic | 20.0% |
| !! | TAATAAATAATAGCAGTAGA+AGG | - | chr2_4:41875155-41875174 | None:intergenic | 20.0% |
| !! | TTCTGATTAATATATCATTG+TGG | - | chr2_4:41875235-41875254 | None:intergenic | 20.0% |
| !!! | TTTATTTTTAGTATTCACCT+TGG | - | chr2_4:41875399-41875418 | None:intergenic | 20.0% |
| !!! | CATTTTGTAGTTTATCAAAT+TGG | + | chr2_4:41875605-41875624 | Msa0328890:intron | 20.0% |
| !!! | TTTATCAAATTGGTTTGTAT+CGG | + | chr2_4:41875615-41875634 | Msa0328890:intron | 20.0% |
| !!! | TGTTTCATGATTTTACATTA+TGG | - | chr2_4:41875960-41875979 | None:intergenic | 20.0% |
| !! | TATGTAGCAAGAAAATTATT+TGG | - | chr2_4:41876294-41876313 | None:intergenic | 20.0% |
| !! | TGAGAAAAATAATAAGAGTT+TGG | + | chr2_4:41876664-41876683 | Msa0328890:intron | 20.0% |
| !! | AGTTAGCATCAAATTATTAT+TGG | - | chr2_4:41876696-41876715 | None:intergenic | 20.0% |
| !! | CTTGATTTCTCTATTTATTT+AGG | - | chr2_4:41876773-41876792 | None:intergenic | 20.0% |
| !!! | ACAGAAGAATGAATAATTTT+AGG | - | chr2_4:41876850-41876869 | None:intergenic | 20.0% |
| !! | AAAATTATTCATTCTTCTGT+TGG | + | chr2_4:41876850-41876869 | Msa0328890:intron | 20.0% |
| !! | AAATTATTCATTCTTCTGTT+GGG | + | chr2_4:41876851-41876870 | Msa0328890:intron | 20.0% |
| !!! | GTTATAATTCTTTGACATTT+TGG | + | chr2_4:41876991-41877010 | Msa0328890:intron | 20.0% |
| !! | AAAGATAAATATGCTTAGAA+TGG | + | chr2_4:41877084-41877103 | Msa0328890:intron | 20.0% |
| !!! | TGTAGAGATTTTATAGTATT+AGG | + | chr2_4:41877585-41877604 | Msa0328890:intron | 20.0% |
| !!! | ATATTTATCTTTTTTGTTGC+AGG | + | chr2_4:41877658-41877677 | Msa0328890:intron | 20.0% |
| !!! | TACTTACAGATTTAATCTTT+TGG | - | chr2_4:41877721-41877740 | None:intergenic | 20.0% |
| !!! | TTCTTCTTTTGAATATTGTT+TGG | + | chr2_4:41878051-41878070 | Msa0328890:intron | 20.0% |
| !! | ATGTCATTATTCTACTTTAT+AGG | - | chr2_4:41878323-41878342 | None:intergenic | 20.0% |
| !! | TTAAAAGAGGAAAATATTTG+TGG | - | chr2_4:41878770-41878789 | None:intergenic | 20.0% |
| !! | TTTAATCAATTAGTGTCATA+TGG | + | chr2_4:41878785-41878804 | Msa0328890:intron | 20.0% |
| !! | ATTAGTCAAAATTAAGAGTT+GGG | - | chr2_4:41878834-41878853 | None:intergenic | 20.0% |
| !! | AATTTATAGAAAATGTGGTT+TGG | - | chr2_4:41878930-41878949 | None:intergenic | 20.0% |
| !! | GATCAAATTATTTCCTTATT+TGG | + | chr2_4:41879107-41879126 | Msa0328890:intron | 20.0% |
| !! | TATTTCAATGTGTATATTAC+TGG | - | chr2_4:41879259-41879278 | None:intergenic | 20.0% |
| !! | ATACAATATTAGAATGTCAT+AGG | - | chr2_4:41879359-41879378 | None:intergenic | 20.0% |
| !! | TATGACATTCTAATATTGTA+TGG | + | chr2_4:41879358-41879377 | Msa0328890:intron | 20.0% |
| !!! | ACGAATCAATTTTTAATCAA+TGG | + | chr2_4:41879589-41879608 | Msa0328890:intron | 20.0% |
| !! | AACATTAGTATGAAAATAAC+CGG | + | chr2_4:41879878-41879897 | Msa0328890:intron | 20.0% |
| !!! | TTATTTTGAATTTTGGGGTA+CGG | + | chr2_4:41871715-41871734 | Msa0328890:intron | 25.0% |
| !!! | TTTTTTTTTCTCTTTGACGA+AGG | + | chr2_4:41871865-41871884 | Msa0328890:intron | 25.0% |
| !! | GTAGCAAAATTTTATAGGTT+AGG | + | chr2_4:41871918-41871937 | Msa0328890:intron | 25.0% |
| ! | TCGAAAAATCTAATAATGCA+TGG | + | chr2_4:41871995-41872014 | Msa0328890:intron | 25.0% |
| ! | CGAAAAATCTAATAATGCAT+GGG | + | chr2_4:41871996-41872015 | Msa0328890:intron | 25.0% |
| !! | ATTTTTGCTCTGACTTTAAT+TGG | - | chr2_4:41872048-41872067 | None:intergenic | 25.0% |
| !!! | GTAAATTTTGTTTGTAGTTC+AGG | + | chr2_4:41872307-41872326 | Msa0328890:intron | 25.0% |
| ! | ATTTACATCATCCTATCTTT+AGG | + | chr2_4:41872510-41872529 | Msa0328890:intron | 25.0% |
| !! | TTGTAAGAAACACAAGTTTT+AGG | + | chr2_4:41872573-41872592 | Msa0328890:intron | 25.0% |
| !! | GATTTTCGTAAAAGAAGTTT+CGG | + | chr2_4:41872595-41872614 | Msa0328890:intron | 25.0% |
| ! | TACACTTACAAATACCTAAA+TGG | - | chr2_4:41872748-41872767 | None:intergenic | 25.0% |
| !! | GCATAATTTTGTGTATTTTC+AGG | + | chr2_4:41872876-41872895 | Msa0328890:intron | 25.0% |
| ! | AGAAATCATTCCCAAAAAAA+AGG | - | chr2_4:41872957-41872976 | None:intergenic | 25.0% |
| ! | ATAAACTGTGAATAGTTGAA+AGG | - | chr2_4:41873024-41873043 | None:intergenic | 25.0% |
| ! | TTAATTGTTAACAATTGTCG+TGG | + | chr2_4:41873071-41873090 | Msa0328890:intron | 25.0% |
| !!! | GTTATTTTTTCCTTGTTGTA+GGG | + | chr2_4:41873093-41873112 | Msa0328890:intron | 25.0% |
| !!! | CAACTACTTGTTATAAACTA+TGG | + | chr2_4:41873153-41873172 | Msa0328890:CDS | 25.0% |
| ! | CAATATCCCAAAATTATTTC+TGG | + | chr2_4:41873361-41873380 | Msa0328890:intron | 25.0% |
| ! | TTTCATGTGATTTATGTATG+CGG | + | chr2_4:41873818-41873837 | Msa0328890:intron | 25.0% |
| ! | AAGTGAAGAGTTTATTGTAA+GGG | + | chr2_4:41873932-41873951 | Msa0328890:CDS | 25.0% |
| !! | TTTATTGTAAGGGCATATAA+AGG | + | chr2_4:41873942-41873961 | Msa0328890:CDS | 25.0% |
| ! | ATGAACTACAATTATCAACA+AGG | - | chr2_4:41874055-41874074 | None:intergenic | 25.0% |
| !!! | ATACCGAGTAATGAATTTTT+TGG | + | chr2_4:41874499-41874518 | Msa0328890:intron | 25.0% |
| !!! | TACCGAGTAATGAATTTTTT+GGG | + | chr2_4:41874500-41874519 | Msa0328890:intron | 25.0% |
| ! | AACCCAAAAAATTCATTACT+CGG | - | chr2_4:41874505-41874524 | None:intergenic | 25.0% |
| !!! | GAATTTTTTGGGTTATAAGT+TGG | + | chr2_4:41874511-41874530 | Msa0328890:intron | 25.0% |
| ! | ATGTTTAAATGGGATTATCA+GGG | - | chr2_4:41874711-41874730 | None:intergenic | 25.0% |
| ! | TAGATACGATATTGAGAATA+AGG | + | chr2_4:41874870-41874889 | Msa0328890:intron | 25.0% |
| !!! | TGTCTCATGTTTTAGTTATT+GGG | + | chr2_4:41875006-41875025 | Msa0328890:intron | 25.0% |
| !!! | ACCTATTTTTTTAATCATCG+AGG | + | chr2_4:41875188-41875207 | Msa0328890:intron | 25.0% |
| ! | GATATAGATATAGATCTGTT+AGG | - | chr2_4:41875494-41875513 | None:intergenic | 25.0% |
| !!! | TTATCAAATTGGTTTGTATC+GGG | + | chr2_4:41875616-41875635 | Msa0328890:intron | 25.0% |
| ! | CTAAATTAAGGAATTACAGA+TGG | + | chr2_4:41875676-41875695 | Msa0328890:intron | 25.0% |
| !!! | ACAACATTGACTCTAAAAAA+GGG | - | chr2_4:41875795-41875814 | None:intergenic | 25.0% |
| !!! | TACAACATTGACTCTAAAAA+AGG | - | chr2_4:41875796-41875815 | None:intergenic | 25.0% |
| ! | AAAAAGTGATATAACTACGA+AGG | + | chr2_4:41875983-41876002 | Msa0328890:intron | 25.0% |
| ! | ATAACTACGAAGGAAAATAT+AGG | + | chr2_4:41875993-41876012 | Msa0328890:intron | 25.0% |
| ! | AATTGACGTAGTTAAATTGA+TGG | + | chr2_4:41876122-41876141 | Msa0328890:intron | 25.0% |
| !!! | AACATAACAAAAGTTTTGTC+AGG | - | chr2_4:41876342-41876361 | None:intergenic | 25.0% |
| !! | TGGATTTAATCCATACTTTT+CGG | - | chr2_4:41876451-41876470 | None:intergenic | 25.0% |
| ! | ATTAAATCCAAAGAAACACA+TGG | + | chr2_4:41876461-41876480 | Msa0328890:CDS | 25.0% |
| !! | TTCTCTTTTTGTTGAAGTTA+TGG | + | chr2_4:41876625-41876644 | Msa0328890:intron | 25.0% |
| !! | TCTCTTTTTGTTGAAGTTAT+GGG | + | chr2_4:41876626-41876645 | Msa0328890:intron | 25.0% |
| ! | TCTTGTGTCTTTATATATAG+GGG | - | chr2_4:41876742-41876761 | None:intergenic | 25.0% |
| ! | GTCTTGTGTCTTTATATATA+GGG | - | chr2_4:41876743-41876762 | None:intergenic | 25.0% |
| !! | AGTCTTGTGTCTTTATATAT+AGG | - | chr2_4:41876744-41876763 | None:intergenic | 25.0% |
| ! | AATTATTCATTCTTCTGTTG+GGG | + | chr2_4:41876852-41876871 | Msa0328890:intron | 25.0% |
| ! | GAAATAACCAAAATTAAGGA+AGG | - | chr2_4:41876922-41876941 | None:intergenic | 25.0% |
| !! | GAAGTTAAAAAGTTCTGATT+TGG | + | chr2_4:41877013-41877032 | Msa0328890:intron | 25.0% |
| !!! | AGTTGATAGTCATTTAGTAT+AGG | + | chr2_4:41877406-41877425 | Msa0328890:intron | 25.0% |
| ! | AATTCAAATGTATGCAAACT+TGG | + | chr2_4:41877448-41877467 | Msa0328890:intron | 25.0% |
| ! | ATTCAAATGTATGCAAACTT+GGG | + | chr2_4:41877449-41877468 | Msa0328890:intron | 25.0% |
| !! | AGGACATATACATGATTTTT+AGG | - | chr2_4:41877485-41877504 | None:intergenic | 25.0% |
| ! | TATAAAATCTCTACAATAGC+GGG | - | chr2_4:41877580-41877599 | None:intergenic | 25.0% |
| ! | CTATAAAATCTCTACAATAG+CGG | - | chr2_4:41877581-41877600 | None:intergenic | 25.0% |
| !! | GCGTAATATTTTCCAATTTA+AGG | - | chr2_4:41877768-41877787 | None:intergenic | 25.0% |
| ! | TATATTGTTCAGTACCAAAA+GGG | - | chr2_4:41877848-41877867 | None:intergenic | 25.0% |
| ! | ATATATTGTTCAGTACCAAA+AGG | - | chr2_4:41877849-41877868 | None:intergenic | 25.0% |
| ! | TTTCTTGTGATACATTCTAT+AGG | - | chr2_4:41877877-41877896 | None:intergenic | 25.0% |
| !!! | TGATAAATTGATAATGGACA+TGG | - | chr2_4:41878296-41878315 | None:intergenic | 25.0% |
| !!! | GGTTGATGATAAATTGATAA+TGG | - | chr2_4:41878302-41878321 | None:intergenic | 25.0% |
| ! | AACACTAGTAAATCCATTAT+AGG | - | chr2_4:41878512-41878531 | None:intergenic | 25.0% |
| ! | TTCACACACATAAATTTGAA+GGG | - | chr2_4:41878556-41878575 | None:intergenic | 25.0% |
| ! | TTTCACACACATAAATTTGA+AGG | - | chr2_4:41878557-41878576 | None:intergenic | 25.0% |
| ! | AGGAAAATATTTGTGGAATT+GGG | - | chr2_4:41878763-41878782 | None:intergenic | 25.0% |
| ! | TGACACTAATTGATTAAAAG+AGG | - | chr2_4:41878783-41878802 | None:intergenic | 25.0% |
| ! | CATTAGTCAAAATTAAGAGT+TGG | - | chr2_4:41878835-41878854 | None:intergenic | 25.0% |
| ! | ATTGGGCTTAAAATATTTCT+TGG | - | chr2_4:41878986-41879005 | None:intergenic | 25.0% |
| !!! | AAATATTTTAAGCCCAATGA+GGG | + | chr2_4:41878988-41879007 | Msa0328890:intron | 25.0% |
| ! | TAAATGACACGTATATCTAA+AGG | - | chr2_4:41879227-41879246 | None:intergenic | 25.0% |
| !!! | AGATATACGTGTCATTTATT+TGG | + | chr2_4:41879229-41879248 | Msa0328890:intron | 25.0% |
| !! | ATGATAAAATGTAGCATTGA+AGG | - | chr2_4:41879284-41879303 | None:intergenic | 25.0% |
| ! | AATTGAACATGAATTAGTCA+GGG | - | chr2_4:41879629-41879648 | None:intergenic | 25.0% |
| ! | AATTCAATGATTGCTATACA+GGG | + | chr2_4:41879645-41879664 | Msa0328890:intron | 25.0% |
| !! | GCATTATTAGATTTTTCGAC+TGG | - | chr2_4:41871994-41872013 | None:intergenic | 30.0% |
| CATTTACAATTAACCCACAA+GGG | - | chr2_4:41872162-41872181 | None:intergenic | 30.0% | |
| ACATTTACAATTAACCCACA+AGG | - | chr2_4:41872163-41872182 | None:intergenic | 30.0% | |
| !! | ATTTTGTTTGTAGTTCAGGA+TGG | + | chr2_4:41872311-41872330 | Msa0328890:intron | 30.0% |
| ATTTCAGTCTGTGTCAAATA+AGG | - | chr2_4:41872483-41872502 | None:intergenic | 30.0% | |
| !! | ATCATCCTATCTTTAGGATT+TGG | + | chr2_4:41872516-41872535 | Msa0328890:intron | 30.0% |
| !! | ATTTCGAGTTTCTAGTTTGT+TGG | + | chr2_4:41872543-41872562 | Msa0328890:intron | 30.0% |
| AATGGACATTCAAATGGTAA+AGG | - | chr2_4:41872730-41872749 | None:intergenic | 30.0% | |
| TACCATTTGAATGTCCATTT+AGG | + | chr2_4:41872731-41872750 | Msa0328890:intron | 30.0% | |
| TACCTAAATGGACATTCAAA+TGG | - | chr2_4:41872736-41872755 | None:intergenic | 30.0% | |
| !!! | AATCCTGTATGCCTTTTTTT+TGG | + | chr2_4:41872943-41872962 | Msa0328890:intron | 30.0% |
| !!! | ATCCTGTATGCCTTTTTTTT+GGG | + | chr2_4:41872944-41872963 | Msa0328890:intron | 30.0% |
| !!! | GGTTATTTTTTCCTTGTTGT+AGG | + | chr2_4:41873092-41873111 | Msa0328890:intron | 30.0% |
| AAAATCTAAAGAGCCTAATG+TGG | + | chr2_4:41873179-41873198 | Msa0328890:CDS | 30.0% | |
| AAATCTAAAGAGCCTAATGT+GGG | + | chr2_4:41873180-41873199 | Msa0328890:CDS | 30.0% | |
| TTCTACCAAAAACTGTTGAA+TGG | + | chr2_4:41873214-41873233 | Msa0328890:CDS | 30.0% | |
| ! | ATCAACCATTCAACAGTTTT+TGG | - | chr2_4:41873222-41873241 | None:intergenic | 30.0% |
| ! | AAACTGTTGAATGGTTGATA+AGG | + | chr2_4:41873223-41873242 | Msa0328890:CDS | 30.0% |
| AGGTACTTATTAGATGTTGA+TGG | + | chr2_4:41873243-41873262 | Msa0328890:intron | 30.0% | |
| TATCCAAATTTGTCCTGAAA+TGG | + | chr2_4:41873306-41873325 | Msa0328890:intron | 30.0% | |
| TTACCATTTCAGGACAAATT+TGG | - | chr2_4:41873312-41873331 | None:intergenic | 30.0% | |
| !! | TGAAATGGTTTTACCATTTC+AGG | - | chr2_4:41873322-41873341 | None:intergenic | 30.0% |
| ! | ACAGTCCCAGAAATAATTTT+GGG | - | chr2_4:41873370-41873389 | None:intergenic | 30.0% |
| ! | TACAGTCCCAGAAATAATTT+TGG | - | chr2_4:41873371-41873390 | None:intergenic | 30.0% |
| AAACCTAGTGAATAATGTCA+GGG | - | chr2_4:41873429-41873448 | None:intergenic | 30.0% | |
| AATTTGGCCATTGAAATTGT+AGG | - | chr2_4:41873598-41873617 | None:intergenic | 30.0% | |
| TACAATTTCAATGGCCAAAT+TGG | + | chr2_4:41873597-41873616 | Msa0328890:intron | 30.0% | |
| CATTTATGAAAGGCTTGAAT+AGG | - | chr2_4:41873735-41873754 | None:intergenic | 30.0% | |
| GCGAAATACACATTTATGAA+AGG | - | chr2_4:41873745-41873764 | None:intergenic | 30.0% | |
| GAAGTGAAGAGTTTATTGTA+AGG | + | chr2_4:41873931-41873950 | Msa0328890:CDS | 30.0% | |
| TGTATGCAATAACAATCTCA+TGG | - | chr2_4:41874098-41874117 | None:intergenic | 30.0% | |
| ACAATATTAGCAAAGTACAC+AGG | - | chr2_4:41874125-41874144 | None:intergenic | 30.0% | |
| ATACAGAATTTGTACTGTCT+GGG | + | chr2_4:41874186-41874205 | Msa0328890:intron | 30.0% | |
| !!! | TTTTTGGGTTATAAGTTGGA+AGG | + | chr2_4:41874515-41874534 | Msa0328890:intron | 30.0% |
| TGTTTAAATGGGATTATCAG+GGG | - | chr2_4:41874710-41874729 | None:intergenic | 30.0% | |
| CATGTTTAAATGGGATTATC+AGG | - | chr2_4:41874712-41874731 | None:intergenic | 30.0% | |
| !!! | GTGTCTCATGTTTTAGTTAT+TGG | + | chr2_4:41875005-41875024 | Msa0328890:intron | 30.0% |
| !! | ACCTTACAATCGTTTTTGTA+AGG | + | chr2_4:41875097-41875116 | Msa0328890:intron | 30.0% |
| TCCTTACAAAAACGATTGTA+AGG | - | chr2_4:41875101-41875120 | None:intergenic | 30.0% | |
| GTGAAACTAATGTTGACATT+GGG | - | chr2_4:41875133-41875152 | None:intergenic | 30.0% | |
| GCCTCGATGATTAAAAAAAT+AGG | - | chr2_4:41875192-41875211 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTAATCATCGAGGC+AGG | + | chr2_4:41875192-41875211 | Msa0328890:intron | 30.0% |
| TGTTGAAAAAATTAGTGCCT+CGG | + | chr2_4:41875423-41875442 | Msa0328890:intron | 30.0% | |
| !!! | ATTTTTAGCTTACTAATCCG+AGG | - | chr2_4:41875443-41875462 | None:intergenic | 30.0% |
| !! | CGGATTAGTAAGCTAAAAAT+TGG | + | chr2_4:41875443-41875462 | Msa0328890:intron | 30.0% |
| !! | TTTTCTTGTCTGCTTTTGAA+AGG | + | chr2_4:41875714-41875733 | Msa0328890:intron | 30.0% |
| !! | TTTCTTGTCTGCTTTTGAAA+GGG | + | chr2_4:41875715-41875734 | Msa0328890:intron | 30.0% |
| CATTATGGCAATGAAATCTA+GGG | - | chr2_4:41875945-41875964 | None:intergenic | 30.0% | |
| ACATTATGGCAATGAAATCT+AGG | - | chr2_4:41875946-41875965 | None:intergenic | 30.0% | |
| ! | GGCAATTTTCTTATCTTTTG+TGG | + | chr2_4:41876014-41876033 | Msa0328890:intron | 30.0% |
| AATATAGCTATGCAAGTACA+CGG | - | chr2_4:41876318-41876337 | None:intergenic | 30.0% | |
| ATGCAAAAGATGACACATAT+TGG | + | chr2_4:41876372-41876391 | Msa0328890:CDS | 30.0% | |
| TGCAAAAGATGACACATATT+GGG | + | chr2_4:41876373-41876392 | Msa0328890:CDS | 30.0% | |
| ! | TATGATTCCTTGATGACATT+TGG | + | chr2_4:41876820-41876839 | Msa0328890:intron | 30.0% |
| ATTATTCATTCTTCTGTTGG+GGG | + | chr2_4:41876853-41876872 | Msa0328890:intron | 30.0% | |
| ! | ATGAAGCAAATTCCTTGTTT+GGG | + | chr2_4:41877178-41877197 | Msa0328890:intron | 30.0% |
| !! | TTAAGTTGTTTTCCCAAACA+AGG | - | chr2_4:41877193-41877212 | None:intergenic | 30.0% |
| TAAATAAAGTCATCTGCTGT+CGG | + | chr2_4:41877266-41877285 | Msa0328890:intron | 30.0% | |
| AACTACTAATGAGACTGTTT+AGG | - | chr2_4:41877390-41877409 | None:intergenic | 30.0% | |
| GTATTTAAAAGAGGTTGACA+AGG | - | chr2_4:41877505-41877524 | None:intergenic | 30.0% | |
| !! | CCTTAGCTTGTATTTAAAAG+AGG | - | chr2_4:41877514-41877533 | None:intergenic | 30.0% |
| ! | CCTCTTTTAAATACAAGCTA+AGG | + | chr2_4:41877511-41877530 | Msa0328890:intron | 30.0% |
| ATAAAATCTCTACAATAGCG+GGG | - | chr2_4:41877579-41877598 | None:intergenic | 30.0% | |
| ! | GAGATTTTATAGTATTAGGC+CGG | + | chr2_4:41877589-41877608 | Msa0328890:intron | 30.0% |
| GAACACTAAAAAAACAAAGC+CGG | - | chr2_4:41877611-41877630 | None:intergenic | 30.0% | |
| AATCTGTAAGTATACAGAAC+TGG | + | chr2_4:41877729-41877748 | Msa0328890:intron | 30.0% | |
| GGAGTTTGATTACCTTAAAT+TGG | + | chr2_4:41877753-41877772 | Msa0328890:intron | 30.0% | |
| ACATGTTCAATATGTGTTGT+AGG | - | chr2_4:41877810-41877829 | None:intergenic | 30.0% | |
| TTTAGATTCATCGATGCTAA+TGG | + | chr2_4:41877915-41877934 | Msa0328890:intron | 30.0% | |
| TTCAAAAGAAGAAAAACACG+AGG | - | chr2_4:41878044-41878063 | None:intergenic | 30.0% | |
| !!! | CAAAACTAAGCTTTTGAGTT+TGG | - | chr2_4:41878375-41878394 | None:intergenic | 30.0% |
| !!! | AAGCTTAGTTTTGTTTCACA+TGG | + | chr2_4:41878382-41878401 | Msa0328890:intron | 30.0% |
| CATTATAGGCAAAGTTAAGA+TGG | - | chr2_4:41878498-41878517 | None:intergenic | 30.0% | |
| CATCTTAACTTTGCCTATAA+TGG | + | chr2_4:41878496-41878515 | Msa0328890:intron | 30.0% | |
| TAAAGAAGAATCTACAATGG+AGG | - | chr2_4:41878726-41878745 | None:intergenic | 30.0% | |
| GCATAAAGAAGAATCTACAA+TGG | - | chr2_4:41878729-41878748 | None:intergenic | 30.0% | |
| GGAAAATATTTGTGGAATTG+GGG | - | chr2_4:41878762-41878781 | None:intergenic | 30.0% | |
| GAGGAAAATATTTGTGGAAT+TGG | - | chr2_4:41878764-41878783 | None:intergenic | 30.0% | |
| ! | TGACTAATGCAATTTAAAGC+AGG | + | chr2_4:41878846-41878865 | Msa0328890:intron | 30.0% |
| ! | GACTAATGCAATTTAAAGCA+GGG | + | chr2_4:41878847-41878866 | Msa0328890:intron | 30.0% |
| ! | ACTAATGCAATTTAAAGCAG+GGG | + | chr2_4:41878848-41878867 | Msa0328890:intron | 30.0% |
| !! | GAAATATTTTAAGCCCAATG+AGG | + | chr2_4:41878987-41879006 | Msa0328890:intron | 30.0% |
| AGACTTTGATGGGAAAAATT+TGG | + | chr2_4:41879062-41879081 | Msa0328890:intron | 30.0% | |
| CAGTATGTATGTTCCAAATA+AGG | - | chr2_4:41879123-41879142 | None:intergenic | 30.0% | |
| ! | CTTATTTGGAACATACATAC+TGG | + | chr2_4:41879121-41879140 | Msa0328890:intron | 30.0% |
| ATACATACTGGCAAATGATA+AGG | + | chr2_4:41879133-41879152 | Msa0328890:intron | 30.0% | |
| TACATACTGGCAAATGATAA+GGG | + | chr2_4:41879134-41879153 | Msa0328890:intron | 30.0% | |
| CATTAAATAAAATAGGGGAG+AGG | + | chr2_4:41879195-41879214 | Msa0328890:intron | 30.0% | |
| TATTGTATGGTACTAAGTGT+TGG | + | chr2_4:41879371-41879390 | Msa0328890:intron | 30.0% | |
| !! | ACTTATTTTCTCGTAGACTT+TGG | - | chr2_4:41879400-41879419 | None:intergenic | 30.0% |
| AACAAAAGCTATTCATCACT+AGG | - | chr2_4:41879508-41879527 | None:intergenic | 30.0% | |
| GAATTGAACATGAATTAGTC+AGG | - | chr2_4:41879630-41879649 | None:intergenic | 30.0% | |
| CAATTCAATGATTGCTATAC+AGG | + | chr2_4:41879644-41879663 | Msa0328890:intron | 30.0% | |
| TTCGTTCAAGCATATTTCAT+AGG | + | chr2_4:41879685-41879704 | Msa0328890:CDS | 30.0% | |
| TGCATTATGTAATCTGACAA+TGG | + | chr2_4:41879940-41879959 | Msa0328890:CDS | 30.0% | |
| GTAACGATTGAATGAAGCTT+AGG | + | chr2_4:41871805-41871824 | Msa0328890:intron | 35.0% | |
| AGTCAGAGCAAAAATCTGTA+TGG | + | chr2_4:41872053-41872072 | Msa0328890:intron | 35.0% | |
| ATTTGACACAGACTGAAATG+AGG | + | chr2_4:41872484-41872503 | Msa0328890:CDS | 35.0% | |
| TTTGACACAGACTGAAATGA+GGG | + | chr2_4:41872485-41872504 | Msa0328890:CDS | 35.0% | |
| TAGTGCCAAATCCTAAAGAT+AGG | - | chr2_4:41872524-41872543 | None:intergenic | 35.0% | |
| TCGTAAAAGAAGTTTCGGTA+TGG | + | chr2_4:41872600-41872619 | Msa0328890:intron | 35.0% | |
| ! | TAGCTGACATTGTTATTAGC+AGG | + | chr2_4:41872902-41872921 | Msa0328890:CDS | 35.0% |
| ! | TTCCCAAAAAAAAGGCATAC+AGG | - | chr2_4:41872949-41872968 | None:intergenic | 35.0% |
| AATCTAAAGAGCCTAATGTG+GGG | + | chr2_4:41873181-41873200 | Msa0328890:CDS | 35.0% | |
| AACCATTTCAACTTAGTCCT+CGG | + | chr2_4:41873332-41873351 | Msa0328890:intron | 35.0% | |
| GAAACCTAGTGAATAATGTC+AGG | - | chr2_4:41873430-41873449 | None:intergenic | 35.0% | |
| !! | ACATTAAGTTGGTGATGTAG+AGG | - | chr2_4:41873461-41873480 | None:intergenic | 35.0% |
| GCTCTACAAATATCATCTGA+AGG | + | chr2_4:41873495-41873514 | Msa0328890:intron | 35.0% | |
| TTGAAATTGTAGGACCGTAT+CGG | - | chr2_4:41873588-41873607 | None:intergenic | 35.0% | |
| ATACGGTCCTACAATTTCAA+TGG | + | chr2_4:41873588-41873607 | Msa0328890:intron | 35.0% | |
| TATCATTCATATGCTGCAGA+AGG | + | chr2_4:41873697-41873716 | Msa0328890:CDS | 35.0% | |
| ATCATTCATATGCTGCAGAA+GGG | + | chr2_4:41873698-41873717 | Msa0328890:CDS | 35.0% | |
| TGTTTCAGAACAAACACTCA+TGG | - | chr2_4:41873877-41873896 | None:intergenic | 35.0% | |
| ! | ATTGTAAGGGCATATAAAGG+TGG | + | chr2_4:41873945-41873964 | Msa0328890:CDS | 35.0% |
| ACAAATCAACATTGCGCTAT+TGG | + | chr2_4:41873985-41874004 | Msa0328890:CDS | 35.0% | |
| TTATCAACAAGGAATCACCT+GGG | - | chr2_4:41874044-41874063 | None:intergenic | 35.0% | |
| ATTATCAACAAGGAATCACC+TGG | - | chr2_4:41874045-41874064 | None:intergenic | 35.0% | |
| CATACAGAATTTGTACTGTC+TGG | + | chr2_4:41874185-41874204 | Msa0328890:intron | 35.0% | |
| TATAGTATGCATCCACTCTT+TGG | + | chr2_4:41874241-41874260 | Msa0328890:intron | 35.0% | |
| !! | AATTACCGATTCATCCATTG+AGG | + | chr2_4:41874318-41874337 | Msa0328890:intron | 35.0% |
| ATACACCTCAATGGATGAAT+CGG | - | chr2_4:41874326-41874345 | None:intergenic | 35.0% | |
| AATCTCGACAAGTAGTAATG+TGG | + | chr2_4:41874452-41874471 | Msa0328890:intron | 35.0% | |
| ATCTCGACAAGTAGTAATGT+GGG | + | chr2_4:41874453-41874472 | Msa0328890:intron | 35.0% | |
| ! | ATCAACAGATTTTCTGCACA+AGG | - | chr2_4:41874593-41874612 | None:intergenic | 35.0% |
| GTTTAAATGGGATTATCAGG+GGG | - | chr2_4:41874709-41874728 | None:intergenic | 35.0% | |
| !! | CTTGATGAGAGTTGATAAAG+AGG | + | chr2_4:41875063-41875082 | Msa0328890:intron | 35.0% |
| ACAAAAACGATTGTAAGGTG+AGG | - | chr2_4:41875096-41875115 | None:intergenic | 35.0% | |
| ! | CGTTTTTGTAAGGATGAGTT+AGG | + | chr2_4:41875107-41875126 | Msa0328890:intron | 35.0% |
| GGTGAAACTAATGTTGACAT+TGG | - | chr2_4:41875134-41875153 | None:intergenic | 35.0% | |
| !! | CACTAGTCTTAACAGAGAAA+AGG | - | chr2_4:41875283-41875302 | None:intergenic | 35.0% |
| AGCTAAAAATTGGTCCGTTA+TGG | + | chr2_4:41875453-41875472 | Msa0328890:intron | 35.0% | |
| CGCTTTGACAAAAACCATAA+CGG | - | chr2_4:41875470-41875489 | None:intergenic | 35.0% | |
| TAAGGAATTACAGATGGTGA+TGG | + | chr2_4:41875682-41875701 | Msa0328890:intron | 35.0% | |
| GCGAAAAAGATACAGAACTA+TGG | - | chr2_4:41875906-41875925 | None:intergenic | 35.0% | |
| GCATTCAATTGTACAGATTG+TGG | + | chr2_4:41876083-41876102 | Msa0328890:intron | 35.0% | |
| GCTAAGACACAAAGTAAGAA+CGG | - | chr2_4:41876149-41876168 | None:intergenic | 35.0% | |
| ATATAGCTATGCAAGTACAC+GGG | - | chr2_4:41876317-41876336 | None:intergenic | 35.0% | |
| ATCCTGTAATCCGAAAAGTA+TGG | + | chr2_4:41876438-41876457 | Msa0328890:CDS | 35.0% | |
| ! | ATCCATACTTTTCGGATTAC+AGG | - | chr2_4:41876443-41876462 | None:intergenic | 35.0% |
| ATCCAAAGAAACACATGGAA+AGG | + | chr2_4:41876466-41876485 | Msa0328890:CDS | 35.0% | |
| TTATTCATTCTTCTGTTGGG+GGG | + | chr2_4:41876854-41876873 | Msa0328890:intron | 35.0% | |
| ! | GTCGTTTCCTTCCTTAATTT+TGG | + | chr2_4:41876912-41876931 | Msa0328890:intron | 35.0% |
| TAGAGTGACATTTCAAAGAC+AGG | - | chr2_4:41877112-41877131 | None:intergenic | 35.0% | |
| AATGAAATTGTCCGTGTAAG+AGG | + | chr2_4:41877145-41877164 | Msa0328890:intron | 35.0% | |
| GATGAAGCAAATTCCTTGTT+TGG | + | chr2_4:41877177-41877196 | Msa0328890:intron | 35.0% | |
| ATCGGAAAACAACTTATGAC+AGG | - | chr2_4:41877362-41877381 | None:intergenic | 35.0% | |
| TATGCAAACTTGGGCTATTT+AGG | + | chr2_4:41877458-41877477 | Msa0328890:intron | 35.0% | |
| !! | TTGACTTTTCCACTGCTTTT+TGG | + | chr2_4:41878160-41878179 | Msa0328890:CDS | 35.0% |
| TGTTTCACATGGTAAAAGTC+CGG | + | chr2_4:41878393-41878412 | Msa0328890:intron | 35.0% | |
| !! | TGAAATGTCGTGTTTTGTTC+AGG | + | chr2_4:41878572-41878591 | Msa0328890:intron | 35.0% |
| !! | GAAATGTCGTGTTTTGTTCA+GGG | + | chr2_4:41878573-41878592 | Msa0328890:intron | 35.0% |
| ATATGGAAATCCATGTCCAT+AGG | + | chr2_4:41878802-41878821 | Msa0328890:intron | 35.0% | |
| TTTGCAATTGGAGACTTTGA+TGG | + | chr2_4:41879051-41879070 | Msa0328890:intron | 35.0% | |
| TTGCAATTGGAGACTTTGAT+GGG | + | chr2_4:41879052-41879071 | Msa0328890:intron | 35.0% | |
| TTTGATGGGAAAAATTTGGC+AGG | + | chr2_4:41879066-41879085 | Msa0328890:intron | 35.0% | |
| ACACGTATATCTAAAGGACA+TGG | - | chr2_4:41879221-41879240 | None:intergenic | 35.0% | |
| TAAAAGGAGAGTCAAGTTTC+AGG | + | chr2_4:41879323-41879342 | Msa0328890:intron | 35.0% | |
| AAGCTATTCATCACTAGGTT+GGG | - | chr2_4:41879503-41879522 | None:intergenic | 35.0% | |
| AAAGCTATTCATCACTAGGT+TGG | - | chr2_4:41879504-41879523 | None:intergenic | 35.0% | |
| TATGCTTGAACGAAAAACTC+TGG | - | chr2_4:41879679-41879698 | None:intergenic | 35.0% | |
| TACTCTTTGGCTAAAATACG+AGG | + | chr2_4:41879738-41879757 | Msa0328890:CDS | 35.0% | |
| AAATCCTGTGAAAAAGAGGA+GGG | - | chr2_4:41879812-41879831 | None:intergenic | 35.0% | |
| TGTCAAATCCTGTGAAAAAG+AGG | - | chr2_4:41879816-41879835 | None:intergenic | 35.0% | |
| ACAGAGATATTCACATGATC+CGG | - | chr2_4:41879900-41879919 | None:intergenic | 35.0% | |
| TCATGTGAATATCTCTGTAC+AGG | + | chr2_4:41879902-41879921 | Msa0328890:intron | 35.0% | |
| AAGACAATGGCAATGTGACA+GGG | - | chr2_4:41871594-41871613 | None:intergenic | 40.0% | |
| AAAGACAATGGCAATGTGAC+AGG | - | chr2_4:41871595-41871614 | None:intergenic | 40.0% | |
| TGTCACATTGCCATTGTCTT+TGG | + | chr2_4:41871594-41871613 | Msa0328890:five_prime_UTR | 40.0% | |
| GTGAATACCTCCAAAGACAA+TGG | - | chr2_4:41871607-41871626 | None:intergenic | 40.0% | |
| ! | TTTGGGGTACGGATGAATTA+TGG | + | chr2_4:41871726-41871745 | Msa0328890:intron | 40.0% |
| TTGTTTGTAGTTCAGGATGG+CGG | + | chr2_4:41872314-41872333 | Msa0328890:intron | 40.0% | |
| ATCATCCCAGTAGCTGAAAT+TGG | - | chr2_4:41872340-41872359 | None:intergenic | 40.0% | |
| TGTTGATCCTCAGGATTTAG+AGG | + | chr2_4:41872362-41872381 | Msa0328890:CDS | 40.0% | |
| ACAAATCATGCCCTACAACA+AGG | - | chr2_4:41873106-41873125 | None:intergenic | 40.0% | |
| !! | TTGGGATATTGATAATGCCG+AGG | - | chr2_4:41873352-41873371 | None:intergenic | 40.0% |
| CATCCCTGACATTATTCACT+AGG | + | chr2_4:41873423-41873442 | Msa0328890:intron | 40.0% | |
| ATGAGGGATTTAGTCCGATA+CGG | + | chr2_4:41873571-41873590 | Msa0328890:intron | 40.0% | |
| TGTTATGTTATGGTCCACCA+AGG | + | chr2_4:41873648-41873667 | Msa0328890:intron | 40.0% | |
| ACTGTAAGCTGCATTAACCT+TGG | - | chr2_4:41873668-41873687 | None:intergenic | 40.0% | |
| AATGCAGCTTACAGTGCATT+AGG | + | chr2_4:41873673-41873692 | Msa0328890:intron | 40.0% | |
| ! | GTGTGACACCCATTTAAGAT+AGG | - | chr2_4:41873773-41873792 | None:intergenic | 40.0% |
| ATATAAAGGTGGTGCGAGAA+AGG | + | chr2_4:41873956-41873975 | Msa0328890:CDS | 40.0% | |
| ! | TCAAAGAAAGTTTTCCACCC+AGG | + | chr2_4:41874024-41874043 | Msa0328890:CDS | 40.0% |
| AGTGGATGCATACTATAGCA+AGG | - | chr2_4:41874238-41874257 | None:intergenic | 40.0% | |
| AGAGAAAAGAAGCCAAAGAG+TGG | - | chr2_4:41874256-41874275 | None:intergenic | 40.0% | |
| GTTGGAAGGAAAGCTGAAAT+TGG | + | chr2_4:41874529-41874548 | Msa0328890:intron | 40.0% | |
| GTTCCTGTTCATTCTCATAC+TGG | + | chr2_4:41874640-41874659 | Msa0328890:CDS | 40.0% | |
| GATCCAGTATGAGAATGAAC+AGG | - | chr2_4:41874646-41874665 | None:intergenic | 40.0% | |
| ! | TCATACTGGATCTCCTTTTC+CGG | + | chr2_4:41874654-41874673 | Msa0328890:CDS | 40.0% |
| TTTGAATGTTCTGCCGGAAA+AGG | - | chr2_4:41874670-41874689 | None:intergenic | 40.0% | |
| TTTCCGGCAGAACATTCAAA+AGG | + | chr2_4:41874670-41874689 | Msa0328890:CDS | 40.0% | |
| ! | TGACCTTTTGAATGTTCTGC+CGG | - | chr2_4:41874676-41874695 | None:intergenic | 40.0% |
| CCAAATTCCATTCTAGACAG+TGG | - | chr2_4:41874769-41874788 | None:intergenic | 40.0% | |
| ! | CCACTGTCTAGAATGGAATT+TGG | + | chr2_4:41874766-41874785 | Msa0328890:intron | 40.0% |
| !! | GATGAGAGTTGATAAAGAGG+AGG | + | chr2_4:41875066-41875085 | Msa0328890:intron | 40.0% |
| TTTACCACTCAATTGGAACC+TGG | - | chr2_4:41875344-41875363 | None:intergenic | 40.0% | |
| CCAAGTCTTTACCACTCAAT+TGG | - | chr2_4:41875351-41875370 | None:intergenic | 40.0% | |
| CCAATTGAGTGGTAAAGACT+TGG | + | chr2_4:41875348-41875367 | Msa0328890:intron | 40.0% | |
| GTGGTAAAGACTTGGAAATC+AGG | + | chr2_4:41875356-41875375 | Msa0328890:intron | 40.0% | |
| ATCAGGTAGTGTCCAACTTA+AGG | + | chr2_4:41875373-41875392 | Msa0328890:intron | 40.0% | |
| !! | TATTCACCTTGGCCTTAAGT+TGG | - | chr2_4:41875388-41875407 | None:intergenic | 40.0% |
| TCAATGTTGCAGGAAACAGT+CGG | - | chr2_4:41875569-41875588 | None:intergenic | 40.0% | |
| CTGAACAACATCAATGTTGC+AGG | - | chr2_4:41875579-41875598 | None:intergenic | 40.0% | |
| CACCTTTCCATGTGTTTCTT+TGG | - | chr2_4:41876471-41876490 | None:intergenic | 40.0% | |
| TTCATACCTTCATTTCCACC+CGG | - | chr2_4:41876532-41876551 | None:intergenic | 40.0% | |
| TCGTTGTTGTACCTCTTACA+CGG | - | chr2_4:41877159-41877178 | None:intergenic | 40.0% | |
| CTGTAAGTATACAGAACTGG+AGG | + | chr2_4:41877732-41877751 | Msa0328890:intron | 40.0% | |
| ! | GAAAAAGTCGAGAACCCTTT+TGG | + | chr2_4:41877831-41877850 | Msa0328890:intron | 40.0% |
| AAGTCAATCCCCATTATTCC+AGG | - | chr2_4:41878147-41878166 | None:intergenic | 40.0% | |
| CAAGTAAAGCCAAAAAGCAG+TGG | - | chr2_4:41878172-41878191 | None:intergenic | 40.0% | |
| TTACCGTTAGAACCATACGT+CGG | + | chr2_4:41878215-41878234 | Msa0328890:intron | 40.0% | |
| !! | AAACCGACGTATGGTTCTAA+CGG | - | chr2_4:41878221-41878240 | None:intergenic | 40.0% |
| ATTATGCACAAACCGACGTA+TGG | - | chr2_4:41878230-41878249 | None:intergenic | 40.0% | |
| AGAAAGCTTCTACTAGAAGC+TGG | - | chr2_4:41878424-41878443 | None:intergenic | 40.0% | |
| !! | TCGTGTTTTGTTCAGGGAAT+TGG | + | chr2_4:41878579-41878598 | Msa0328890:intron | 40.0% |
| !! | CGTGTTTTGTTCAGGGAATT+GGG | + | chr2_4:41878580-41878599 | Msa0328890:intron | 40.0% |
| CCAAAGTACATGGACACAAA+TGG | - | chr2_4:41878649-41878668 | None:intergenic | 40.0% | |
| CCATTTGTGTCCATGTACTT+TGG | + | chr2_4:41878646-41878665 | Msa0328890:CDS | 40.0% | |
| TTCTGATAACCATGCCACAT+AGG | - | chr2_4:41878677-41878696 | None:intergenic | 40.0% | |
| GCATGGTTATCAGAATACGA+AGG | + | chr2_4:41878682-41878701 | Msa0328890:CDS | 40.0% | |
| GGTTATCAGAATACGAAGGA+AGG | + | chr2_4:41878686-41878705 | Msa0328890:CDS | 40.0% | |
| AAGAGTTGGGAAAACACCTA+TGG | - | chr2_4:41878821-41878840 | None:intergenic | 40.0% | |
| ATGGGAAAAATTTGGCAGGA+AGG | + | chr2_4:41879070-41879089 | Msa0328890:intron | 40.0% | |
| ATTTGGCAGGAAGGAATAGT+TGG | + | chr2_4:41879079-41879098 | Msa0328890:intron | 40.0% | |
| CAGGAAGGAATAGTTGGATA+GGG | + | chr2_4:41879085-41879104 | Msa0328890:intron | 40.0% | |
| !! | AAAGAGTACTTGCATCCTGA+GGG | - | chr2_4:41879726-41879745 | None:intergenic | 40.0% |
| CAAATCCTGTGAAAAAGAGG+AGG | - | chr2_4:41879813-41879832 | None:intergenic | 40.0% | |
| TGAATATCTCTGTACAGGCA+AGG | + | chr2_4:41879907-41879926 | Msa0328890:intron | 40.0% | |
| CACATTGCCATTGTCTTTGG+AGG | + | chr2_4:41871597-41871616 | Msa0328890:five_prime_UTR | 45.0% | |
| ACCAATTCACTGTGCACTAG+TGG | + | chr2_4:41872019-41872038 | Msa0328890:intron | 45.0% | |
| CCAATTCACTGTGCACTAGT+GGG | + | chr2_4:41872020-41872039 | Msa0328890:intron | 45.0% | |
| CAATTCACTGTGCACTAGTG+GGG | + | chr2_4:41872021-41872040 | Msa0328890:intron | 45.0% | |
| ATGCCAACAATTCCTGTGTC+GGG | - | chr2_4:41872084-41872103 | None:intergenic | 45.0% | |
| GATGCCAACAATTCCTGTGT+CGG | - | chr2_4:41872085-41872104 | None:intergenic | 45.0% | |
| ! | TTGGCATCTGAGACCTAATG+AGG | + | chr2_4:41872097-41872116 | Msa0328890:intron | 45.0% |
| ! | GGATGATTGTGTTGATCCTC+AGG | + | chr2_4:41872353-41872372 | Msa0328890:CDS | 45.0% |
| CACATTGCCTCTAAATCCTG+AGG | - | chr2_4:41872372-41872391 | None:intergenic | 45.0% | |
| CTCAGGATTTAGAGGCAATG+TGG | + | chr2_4:41872370-41872389 | Msa0328890:CDS | 45.0% | |
| TTAAAAGCTGGCGAGGAAAG+AGG | + | chr2_4:41872420-41872439 | Msa0328890:CDS | 45.0% | |
| CAGTCTGTGTCAAATAAGGC+TGG | - | chr2_4:41872479-41872498 | None:intergenic | 45.0% | |
| ! | GGGCATGATTTGTGCTATTG+CGG | + | chr2_4:41873113-41873132 | Msa0328890:intron | 45.0% |
| AGTTGCATAAGCCCCACATT+AGG | - | chr2_4:41873195-41873214 | None:intergenic | 45.0% | |
| ! | TGCCGAGGACTAAGTTGAAA+TGG | - | chr2_4:41873337-41873356 | None:intergenic | 45.0% |
| GTAAGCTGCATTAACCTTGG+TGG | - | chr2_4:41873665-41873684 | None:intergenic | 45.0% | |
| TCGCTGCTGCCTATCTTAAA+TGG | + | chr2_4:41873761-41873780 | Msa0328890:CDS | 45.0% | |
| CGCTGCTGCCTATCTTAAAT+GGG | + | chr2_4:41873762-41873781 | Msa0328890:CDS | 45.0% | |
| CAAACACTCATGGTAGCTAC+TGG | - | chr2_4:41873867-41873886 | None:intergenic | 45.0% | |
| GTACTGTCTGGGTATAGTGT+TGG | + | chr2_4:41874197-41874216 | Msa0328890:intron | 45.0% | |
| CAAGCACACATACACCTCAA+TGG | - | chr2_4:41874335-41874354 | None:intergenic | 45.0% | |
| TCGACAAGTAGTAATGTGGG+AGG | + | chr2_4:41874456-41874475 | Msa0328890:intron | 45.0% | |
| GATAGTCCTCCTGAAAGCAA+TGG | + | chr2_4:41874613-41874632 | Msa0328890:CDS | 45.0% | |
| CAGAACACCACTGTCTAGAA+TGG | + | chr2_4:41874759-41874778 | Msa0328890:intron | 45.0% | |
| TCCCTAAAACACTCCACCTA+TGG | + | chr2_4:41874800-41874819 | Msa0328890:intron | 45.0% | |
| !! | GCCATAGGTGGAGTGTTTTA+GGG | - | chr2_4:41874804-41874823 | None:intergenic | 45.0% |
| !! | TGCCATAGGTGGAGTGTTTT+AGG | - | chr2_4:41874805-41874824 | None:intergenic | 45.0% |
| AATCCAAATGCGTGATCCAG+TGG | - | chr2_4:41874834-41874853 | None:intergenic | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | + | chr2_4:41875028-41875047 | Msa0328890:intron | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | - | chr2_4:41875037-41875056 | None:intergenic | 45.0% | |
| TATCTATCCGATGTGGGACT+TGG | - | chr2_4:41875038-41875057 | None:intergenic | 45.0% | |
| AAGTCCCACATCGGATAGAT+AGG | + | chr2_4:41875037-41875056 | Msa0328890:intron | 45.0% | |
| GAGTCCTATCTATCCGATGT+GGG | - | chr2_4:41875044-41875063 | None:intergenic | 45.0% | |
| AGAGTCCTATCTATCCGATG+TGG | - | chr2_4:41875045-41875064 | None:intergenic | 45.0% | |
| TAAGACTAGTGACCAGTTCC+AGG | + | chr2_4:41875292-41875311 | Msa0328890:intron | 45.0% | |
| ATTGGAACCTGGAACTCAGT+CGG | - | chr2_4:41875333-41875352 | None:intergenic | 45.0% | |
| AGTTCCAGGTTCCAATTGAG+TGG | + | chr2_4:41875337-41875356 | Msa0328890:intron | 45.0% | |
| TAGTGTCCAACTTAAGGCCA+AGG | + | chr2_4:41875379-41875398 | Msa0328890:intron | 45.0% | |
| TAAAGTGTGTCCGAAGCTTG+AGG | + | chr2_4:41875845-41875864 | Msa0328890:intron | 45.0% | |
| ACTAGCAAAGCCTCAAGCTT+CGG | - | chr2_4:41875858-41875877 | None:intergenic | 45.0% | |
| CATGTCTTCTCGAGATGCTT+TGG | - | chr2_4:41876402-41876421 | None:intergenic | 45.0% | |
| ! | CAAAGCATCTCGAGAAGACA+TGG | + | chr2_4:41876400-41876419 | Msa0328890:CDS | 45.0% |
| GAGAAGACATGGAAGCTATG+TGG | + | chr2_4:41876411-41876430 | Msa0328890:CDS | 45.0% | |
| AGAAGCGACCATATCTTTCC+CGG | + | chr2_4:41876510-41876529 | Msa0328890:CDS | 45.0% | |
| ATTTCCACCCGGGAAAGATA+TGG | - | chr2_4:41876521-41876540 | None:intergenic | 45.0% | |
| TCATACCTTCATTTCCACCC+GGG | - | chr2_4:41876531-41876550 | None:intergenic | 45.0% | |
| AGGCATGCCAAATGTCATCA+AGG | - | chr2_4:41876830-41876849 | None:intergenic | 45.0% | |
| ! | GAGACTGTTTAGGAGAGCAT+CGG | - | chr2_4:41877380-41877399 | None:intergenic | 45.0% |
| CAGAGAGTTAGGCTCATCAT+GGG | - | chr2_4:41877551-41877570 | None:intergenic | 45.0% | |
| ACAGAGAGTTAGGCTCATCA+TGG | - | chr2_4:41877552-41877571 | None:intergenic | 45.0% | |
| CAGACAGTACTTTGTGCCAT+TGG | + | chr2_4:41878078-41878097 | Msa0328890:intron | 45.0% | |
| ! | AGTACTTTGTGCCATTGGAG+AGG | + | chr2_4:41878083-41878102 | Msa0328890:CDS | 45.0% |
| ATGCGCTTTGTACATGGAGA+TGG | + | chr2_4:41878114-41878133 | Msa0328890:CDS | 45.0% | |
| TGGACCAAGACCTGGAATAA+TGG | + | chr2_4:41878134-41878153 | Msa0328890:CDS | 45.0% | |
| GGACCAAGACCTGGAATAAT+GGG | + | chr2_4:41878135-41878154 | Msa0328890:CDS | 45.0% | |
| GACCAAGACCTGGAATAATG+GGG | + | chr2_4:41878136-41878155 | Msa0328890:CDS | 45.0% | |
| ATCCCCATTATTCCAGGTCT+TGG | - | chr2_4:41878141-41878160 | None:intergenic | 45.0% | |
| CTACTAGAAGCTGGAAAAGC+CGG | - | chr2_4:41878415-41878434 | None:intergenic | 45.0% | |
| ATAGGCAGCACCAAAGTACA+TGG | - | chr2_4:41878659-41878678 | None:intergenic | 45.0% | |
| ! | GAAGGAAGGTACATCTGATC+TGG | + | chr2_4:41878700-41878719 | Msa0328890:intron | 45.0% |
| TGGGAAAACACCTATGGACA+TGG | - | chr2_4:41878815-41878834 | None:intergenic | 45.0% | |
| ! | TTTAAAGCAGGGGCAGAACT+AGG | + | chr2_4:41878858-41878877 | Msa0328890:intron | 45.0% |
| ! | ATTTTAAGCCCAATGAGGGC+CGG | + | chr2_4:41878992-41879011 | Msa0328890:intron | 45.0% |
| GTCTCCAATTGCAAACAGCA+CGG | - | chr2_4:41879046-41879065 | None:intergenic | 45.0% | |
| GCAGGAAGGAATAGTTGGAT+AGG | + | chr2_4:41879084-41879103 | Msa0328890:intron | 45.0% | |
| ACTGGCAAATGATAAGGGAG+AGG | + | chr2_4:41879139-41879158 | Msa0328890:intron | 45.0% | |
| ACCTCATTGTTCACCATGCA+TGG | - | chr2_4:41879165-41879184 | None:intergenic | 45.0% | |
| ACCAAAGAATGTGAACCCTC+AGG | + | chr2_4:41879708-41879727 | Msa0328890:CDS | 45.0% | |
| TCCTGAGGGTTCACATTCTT+TGG | - | chr2_4:41879712-41879731 | None:intergenic | 45.0% | |
| !! | CAAAGAGTACTTGCATCCTG+AGG | - | chr2_4:41879727-41879746 | None:intergenic | 45.0% |
| CTCAGGATGCAAGTACTCTT+TGG | + | chr2_4:41879725-41879744 | Msa0328890:CDS | 45.0% | |
| AATGTGACAGGGAGAGATGG+GGG | - | chr2_4:41871583-41871602 | None:intergenic | 50.0% | |
| CAATGTGACAGGGAGAGATG+GGG | - | chr2_4:41871584-41871603 | None:intergenic | 50.0% | |
| GCAATGTGACAGGGAGAGAT+GGG | - | chr2_4:41871585-41871604 | None:intergenic | 50.0% | |
| CCCACTAGTGCACAGTGAAT+TGG | - | chr2_4:41872023-41872042 | None:intergenic | 50.0% | |
| CAACAATTCCTGTGTCGGGT+CGG | - | chr2_4:41872080-41872099 | None:intergenic | 50.0% | |
| ! | CTAGGAGTGTGCTCCTCATT+AGG | - | chr2_4:41872113-41872132 | None:intergenic | 50.0% |
| ! | CTAATGAGGAGCACACTCCT+AGG | + | chr2_4:41872111-41872130 | Msa0328890:intron | 50.0% |
| ! | TAGCCTGGTGGTGTAGACAT+CGG | - | chr2_4:41872138-41872157 | None:intergenic | 50.0% |
| !! | TTAACCCACAAGGGTTAGCC+TGG | - | chr2_4:41872153-41872172 | None:intergenic | 50.0% |
| ! | AGTGCCGAGTGGTTAAAAGC+TGG | + | chr2_4:41872408-41872427 | Msa0328890:CDS | 50.0% |
| ! | CTCGCCAGCTTTTAACCACT+CGG | - | chr2_4:41872415-41872434 | None:intergenic | 50.0% |
| CATCTCTCTCGTGATCCTGA+AGG | + | chr2_4:41872453-41872472 | Msa0328890:CDS | 50.0% | |
| !! | GTCAAATAAGGCTGGCCTTC+AGG | - | chr2_4:41872471-41872490 | None:intergenic | 50.0% |
| TTGCGGAACTTGAAAGCGAC+AGG | + | chr2_4:41873130-41873149 | Msa0328890:CDS | 50.0% | |
| TCAACAAGGAATCACCTGGG+TGG | - | chr2_4:41874041-41874060 | None:intergenic | 50.0% | |
| GTGTGTCTCTGTGTCTCTCT+TGG | + | chr2_4:41874408-41874427 | Msa0328890:intron | 50.0% | |
| TCCTCCTGAAAGCAATGGTG+TGG | + | chr2_4:41874618-41874637 | Msa0328890:CDS | 50.0% | |
| ACCACACCATTGCTTTCAGG+AGG | - | chr2_4:41874622-41874641 | None:intergenic | 50.0% | |
| GGAACCACACCATTGCTTTC+AGG | - | chr2_4:41874625-41874644 | None:intergenic | 50.0% | |
| AAACACTCCACCTATGGCAG+TGG | + | chr2_4:41874806-41874825 | Msa0328890:intron | 50.0% | |
| GGACAATTGGAACCTGGAAC+TGG | - | chr2_4:41875307-41875326 | None:intergenic | 50.0% | |
| ACTCAGTCGGATGGGACAAT+TGG | - | chr2_4:41875320-41875339 | None:intergenic | 50.0% | |
| AACCTGGAACTCAGTCGGAT+GGG | - | chr2_4:41875328-41875347 | None:intergenic | 50.0% | |
| TGTTGCAGGAAACAGTCGGA+TGG | - | chr2_4:41875565-41875584 | None:intergenic | 50.0% | |
| GAAGCGACCATATCTTTCCC+GGG | + | chr2_4:41876511-41876530 | Msa0328890:CDS | 50.0% | |
| TCTTTCCCGGGTGGAAATGA+AGG | + | chr2_4:41876523-41876542 | Msa0328890:CDS | 50.0% | |
| CATGCTAGCAACCTCTCCAA+TGG | - | chr2_4:41878097-41878116 | None:intergenic | 50.0% | |
| GCTAGCATGCGCTTTGTACA+TGG | + | chr2_4:41878108-41878127 | Msa0328890:CDS | 50.0% | |
| TGTTCAGGGAATTGGGCTTC+AGG | + | chr2_4:41878587-41878606 | Msa0328890:intron | 50.0% | |
| GTTCAGGGAATTGGGCTTCA+GGG | + | chr2_4:41878588-41878607 | Msa0328890:intron | 50.0% | |
| !! | GTACTTTGGTGCTGCCTATG+TGG | + | chr2_4:41878660-41878679 | Msa0328890:CDS | 50.0% |
| ! | TTTTAAGCCCAATGAGGGCC+GGG | + | chr2_4:41878993-41879012 | Msa0328890:intron | 50.0% |
| TTGCAAACAGCACGGACGAA+GGG | - | chr2_4:41879038-41879057 | None:intergenic | 50.0% | |
| ATTGCAAACAGCACGGACGA+AGG | - | chr2_4:41879039-41879058 | None:intergenic | 50.0% | |
| !! | TCGTCCGTGCTGTTTGCAAT+TGG | + | chr2_4:41879039-41879058 | Msa0328890:intron | 50.0% |
| GCCATGCATGGTGAACAATG+AGG | + | chr2_4:41879161-41879180 | Msa0328890:intron | 50.0% | |
| !! | TGGACCCTCCTCTTTTTCAC+AGG | + | chr2_4:41879805-41879824 | Msa0328890:intron | 50.0% |
| GGCAATGTGACAGGGAGAGA+TGG | - | chr2_4:41871586-41871605 | None:intergenic | 55.0% | |
| CGACCCGACACAGGAATTGT+TGG | + | chr2_4:41872078-41872097 | Msa0328890:intron | 55.0% | |
| GTGGTGTAGACATCGGACCT+AGG | - | chr2_4:41872131-41872150 | None:intergenic | 55.0% | |
| ACCACCAGGCTAACCCTTGT+GGG | + | chr2_4:41872146-41872165 | Msa0328890:intron | 55.0% | |
| TGGCGGCCAATTTCAGCTAC+TGG | + | chr2_4:41872331-41872350 | Msa0328890:CDS | 55.0% | |
| GGCGGCCAATTTCAGCTACT+GGG | + | chr2_4:41872332-41872351 | Msa0328890:CDS | 55.0% | |
| !! | TACCTGAAGTGAGTGCCGAG+TGG | + | chr2_4:41872397-41872416 | Msa0328890:CDS | 55.0% |
| AACCACTCGGCACTCACTTC+AGG | - | chr2_4:41872402-41872421 | None:intergenic | 55.0% | |
| CGAGTGGTTAAAAGCTGGCG+AGG | + | chr2_4:41872413-41872432 | Msa0328890:CDS | 55.0% | |
| GCTCCACTGGATCACGCATT+TGG | + | chr2_4:41874828-41874847 | Msa0328890:intron | 55.0% | |
| CGGATGGGACAATTGGAACC+TGG | - | chr2_4:41875313-41875332 | None:intergenic | 55.0% | |
| GAACCTGGAACTCAGTCGGA+TGG | - | chr2_4:41875329-41875348 | None:intergenic | 55.0% | |
| GCGGGGTCTAACAGAGAGTT+AGG | - | chr2_4:41877562-41877581 | None:intergenic | 55.0% | |
| CATGGAGATGGACCAAGACC+TGG | + | chr2_4:41878126-41878145 | Msa0328890:CDS | 55.0% | |
| !! | TTGGTGCTGCCTATGTGGCA+TGG | + | chr2_4:41878665-41878684 | Msa0328890:CDS | 55.0% |
| AACAGCACGGACGAAGGGAA+GGG | - | chr2_4:41879033-41879052 | None:intergenic | 55.0% | |
| AAACAGCACGGACGAAGGGA+AGG | - | chr2_4:41879034-41879053 | None:intergenic | 55.0% | |
| GATAAGGGAGAGGCCATGCA+TGG | + | chr2_4:41879149-41879168 | Msa0328890:intron | 55.0% | |
| ACAGGGAGAGATGGGGGATG+GGG | - | chr2_4:41871577-41871596 | None:intergenic | 60.0% | |
| GACAGGGAGAGATGGGGGAT+GGG | - | chr2_4:41871578-41871597 | None:intergenic | 60.0% | |
| TGACAGGGAGAGATGGGGGA+TGG | - | chr2_4:41871579-41871598 | None:intergenic | 60.0% | |
| TGTATGGACCGACCCGACAC+AGG | + | chr2_4:41872069-41872088 | Msa0328890:intron | 60.0% | |
| GGTCCGATGTCTACACCACC+AGG | + | chr2_4:41872132-41872151 | Msa0328890:intron | 60.0% | |
| CACCACCAGGCTAACCCTTG+TGG | + | chr2_4:41872145-41872164 | Msa0328890:intron | 60.0% | |
| !! | ACCCACAAGGGTTAGCCTGG+TGG | - | chr2_4:41872150-41872169 | None:intergenic | 60.0% |
| AGTGGAGCCACTGCCATAGG+TGG | - | chr2_4:41874816-41874835 | None:intergenic | 60.0% | |
| ACCTATGGCAGTGGCTCCAC+TGG | + | chr2_4:41874815-41874834 | Msa0328890:intron | 60.0% | |
| TCCAGTGGAGCCACTGCCAT+AGG | - | chr2_4:41874819-41874838 | None:intergenic | 60.0% | |
| GTCCCATCCGACTGAGTTCC+AGG | + | chr2_4:41875323-41875342 | Msa0328890:intron | 60.0% | |
| GCGACCATATCTTTCCCGGG+TGG | + | chr2_4:41876514-41876533 | Msa0328890:CDS | 60.0% | |
| AGGGAGGACTAGGAGAGTCC+CGG | - | chr2_4:41879014-41879033 | None:intergenic | 60.0% | |
| GACGAAGGGAAGGGAGGACT+AGG | - | chr2_4:41879024-41879043 | None:intergenic | 60.0% | |
| GGAGAGTCCCGGCCCTCATT+GGG | - | chr2_4:41879003-41879022 | None:intergenic | 65.0% | |
| AGGAGAGTCCCGGCCCTCAT+TGG | - | chr2_4:41879004-41879023 | None:intergenic | 65.0% | |
| AGCACGGACGAAGGGAAGGG+AGG | - | chr2_4:41879030-41879049 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 41871564 | 41879967 | 41871564 | ID=Msa0328890;Name=Msa0328890 |
| chr2_4 | mRNA | 41871564 | 41879967 | 41871564 | ID=Msa0328890-mRNA-1;Parent=Msa0328890;Name=Msa0328890-mRNA-1;_AED=0.24;_eAED=0.24;_QI=56|0.41|0.38|0.53|0.91|0.84|13|0|428 |
| chr2_4 | exon | 41871564 | 41871618 | 41871564 | ID=Msa0328890-mRNA-1:exon:12869;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41872329 | 41872506 | 41872329 | ID=Msa0328890-mRNA-1:exon:12870;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41872898 | 41872948 | 41872898 | ID=Msa0328890-mRNA-1:exon:12871;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41873114 | 41873244 | 41873114 | ID=Msa0328890-mRNA-1:exon:12872;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41873687 | 41873803 | 41873687 | ID=Msa0328890-mRNA-1:exon:12873;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41873926 | 41874045 | 41873926 | ID=Msa0328890-mRNA-1:exon:12874;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41874600 | 41874691 | 41874600 | ID=Msa0328890-mRNA-1:exon:12875;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41876372 | 41876544 | 41876372 | ID=Msa0328890-mRNA-1:exon:12876;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41877680 | 41877733 | 41877680 | ID=Msa0328890-mRNA-1:exon:12877;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41878081 | 41878190 | 41878081 | ID=Msa0328890-mRNA-1:exon:12878;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41878594 | 41878707 | 41878594 | ID=Msa0328890-mRNA-1:exon:12879;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41879666 | 41879769 | 41879666 | ID=Msa0328890-mRNA-1:exon:12880;Parent=Msa0328890-mRNA-1 |
| chr2_4 | exon | 41879924 | 41879967 | 41879924 | ID=Msa0328890-mRNA-1:exon:12881;Parent=Msa0328890-mRNA-1 |
| chr2_4 | five_prime_UTR | 41871564 | 41871618 | 41871564 | ID=Msa0328890-mRNA-1:five_prime_utr;Parent=Msa0328890-mRNA-1 |
| chr2_4 | five_prime_UTR | 41872329 | 41872329 | 41872329 | ID=Msa0328890-mRNA-1:five_prime_utr;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41872330 | 41872506 | 41872330 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41872898 | 41872948 | 41872898 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41873114 | 41873244 | 41873114 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41873687 | 41873803 | 41873687 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41873926 | 41874045 | 41873926 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41874600 | 41874691 | 41874600 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41876372 | 41876544 | 41876372 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41877680 | 41877733 | 41877680 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41878081 | 41878190 | 41878081 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41878594 | 41878707 | 41878594 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41879666 | 41879769 | 41879666 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| chr2_4 | CDS | 41879924 | 41879967 | 41879924 | ID=Msa0328890-mRNA-1:cds;Parent=Msa0328890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
