Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251980 | GAU30101.1 | 74.134 | 433 | 101 | 2 | 2 | 423 | 3 | 435 | 0.0 | 686 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251980 | A0A2Z6ME13 | 74.134 | 433 | 101 | 2 | 2 | 423 | 3 | 435 | 0.0 | 686 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036130 | Msa0251980 | 0.800839 | 1.193887e-48 | -8.615850e-47 |
| Msa0211450 | Msa0251980 | 0.860710 | 1.707969e-63 | -8.615850e-47 |
| Msa0251980 | Msa0290440 | 0.849207 | 3.750607e-60 | -8.615850e-47 |
| Msa0251980 | Msa0300690 | 0.832056 | 1.174856e-55 | -8.615850e-47 |
| Msa0251980 | Msa0328890 | 0.860829 | 1.572032e-63 | -8.615850e-47 |
| Msa0251980 | Msa0594660 | 0.801669 | 8.072459e-49 | -8.615850e-47 |
| Msa0251980 | Msa0765270 | 0.803303 | 3.718644e-49 | -8.615850e-47 |
| Msa0251980 | Msa0967380 | 0.804759 | 1.851516e-49 | -8.615850e-47 |
| Msa0251980 | Msa1079230 | 0.818026 | 2.429146e-52 | -8.615850e-47 |
| Msa0251980 | Msa1113340 | 0.801198 | 1.008287e-48 | -8.615850e-47 |
| Msa0251980 | Msa1168950 | 0.802826 | 4.666819e-49 | -8.615850e-47 |
| Msa0251980 | Msa1446810 | 0.802771 | 4.790417e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251980 | MtrunA17_Chr2g0310431 | 93.443 | 61 | 4 | 0 | 1 | 61 | 1 | 61 | 2.16e-36 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251980 | AT1G16290.1 | 55.213 | 422 | 178 | 1 | 1 | 422 | 1 | 411 | 6.77e-175 | 495 |
| Msa0251980 | AT1G16290.2 | 55.213 | 422 | 178 | 1 | 1 | 422 | 10 | 420 | 9.39e-175 | 495 |
Find 105 sgRNAs with CRISPR-Local
Find 487 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAACCACACCATTGCTTTC+TGG | 0.178419 | 2_2:-42475943 | None:intergenic |
| TCCTGAGGGTTCACATTCTT+TGG | 0.184153 | 2_2:-42481036 | None:intergenic |
| TCGCTGCTGCCTATCTTAAA+TGG | 0.208213 | 2_2:+42475071 | Msa0251980:CDS |
| TCTCACATTGCCATTGTCTT+TGG | 0.208651 | 2_2:+42472904 | Msa0251980:five_prime_UTR |
| CACCTTTCCATGTGTTTCTT+TGG | 0.223630 | 2_2:-42477802 | None:intergenic |
| TGTTCAGGGAATTGGGCTTC+AGG | 0.275199 | 2_2:+42479915 | Msa0251980:intron |
| GTCAAATAAGGCTGGCCTTC+AGG | 0.281392 | 2_2:-42473775 | None:intergenic |
| TACTTACAGATTTAATCTTT+TGG | 0.302332 | 2_2:-42479051 | None:intergenic |
| GGACCAAGACCTGGAATAAT+GGG | 0.309276 | 2_2:+42479463 | Msa0251980:CDS |
| ACAAATCAACATTGCGCTAT+TGG | 0.313860 | 2_2:+42475295 | Msa0251980:CDS |
| CATGTCTTCTCGAGATGCTT+TGG | 0.317971 | 2_2:-42477733 | None:intergenic |
| GTTCCTGTTCATTCTCATAC+TGG | 0.320423 | 2_2:+42475961 | Msa0251980:CDS |
| AACCACTCGGCACTCACTTC+AGG | 0.325760 | 2_2:-42473706 | None:intergenic |
| TGGACCAAGACCTGGAATAA+TGG | 0.330346 | 2_2:+42479462 | Msa0251980:CDS |
| AATGCAGCTTACAGTGCATT+AGG | 0.331785 | 2_2:+42474983 | Msa0251980:intron |
| ATGCAAAAGATGACACATAT+TGG | 0.332150 | 2_2:+42477706 | Msa0251980:CDS |
| ATTTCAGTCTGTGTCAAATA+AGG | 0.338758 | 2_2:-42473787 | None:intergenic |
| ATCATCCCAGTAGCTGAAAT+TGG | 0.339016 | 2_2:-42473644 | None:intergenic |
| CTCAGGATGCAAGTACTCTT+TGG | 0.355544 | 2_2:+42481052 | Msa0251980:CDS |
| CAACTACTTGTTATAAACTA+TGG | 0.357307 | 2_2:+42474461 | Msa0251980:CDS |
| CACATTGCCATTGTCTTTGG+AGG | 0.360792 | 2_2:+42472907 | Msa0251980:five_prime_UTR |
| ATCCCCATTATTCCAGGTCT+TGG | 0.361266 | 2_2:-42479466 | None:intergenic |
| CGCTGCTGCCTATCTTAAAT+GGG | 0.378650 | 2_2:+42475072 | Msa0251980:CDS |
| GCAATGTGAGAGGGAGAGAT+GGG | 0.381777 | 2_2:-42472892 | None:intergenic |
| GTTCAGGGAATTGGGCTTCA+GGG | 0.385434 | 2_2:+42479916 | Msa0251980:intron |
| TTTATTGTAAGGGCATATAA+AGG | 0.393414 | 2_2:+42475252 | Msa0251980:CDS |
| CATTTATGAAAGGCTTGAAT+AGG | 0.398844 | 2_2:-42475042 | None:intergenic |
| TGTTGATCCTCAGGATTTAG+AGG | 0.405970 | 2_2:+42473669 | Msa0251980:CDS |
| ATTTCCACCCGGGAAAGATA+TGG | 0.406385 | 2_2:-42477852 | None:intergenic |
| TGGCGGCCAATTTCAGCTAC+TGG | 0.408185 | 2_2:+42473638 | Msa0251980:CDS |
| TGCAAAAGATGACACATATT+GGG | 0.418121 | 2_2:+42477707 | Msa0251980:CDS |
| ATCCTGTAATCCGAAAAGTA+TGG | 0.424009 | 2_2:+42477772 | Msa0251980:CDS |
| TTTGAATGTTCTGCCGGAAA+AGG | 0.434853 | 2_2:-42475988 | None:intergenic |
| GAAGTGAAGAGTTTATTGTA+AGG | 0.439744 | 2_2:+42475241 | Msa0251980:CDS |
| AAGTCAATCCCCATTATTCC+AGG | 0.454568 | 2_2:-42479472 | None:intergenic |
| AAACTGTTGAATGGTTGATA+AGG | 0.469062 | 2_2:+42474531 | Msa0251980:CDS |
| AGTTGCATAAGCCCCACATT+AGG | 0.469592 | 2_2:-42474500 | None:intergenic |
| GTGTGACACCCATTTAAGAT+AGG | 0.470676 | 2_2:-42475080 | None:intergenic |
| CAGACAGTACTTTGTGCCAT+TGG | 0.471505 | 2_2:+42479406 | Msa0251980:intron |
| TAGCTGACATTGTTATTAGC+AGG | 0.479632 | 2_2:+42474210 | Msa0251980:CDS |
| AGAAGCGACCATATCTTTCC+CGG | 0.479646 | 2_2:+42477844 | Msa0251980:CDS |
| GGATGATTGTGTTGATCCTC+AGG | 0.480334 | 2_2:+42473660 | Msa0251980:CDS |
| CCAAAGTACATGGACACAAA+TGG | 0.481197 | 2_2:-42479974 | None:intergenic |
| GCTAGCATGCGCTTTGTACA+TGG | 0.485765 | 2_2:+42479436 | Msa0251980:CDS |
| TTCGTTCAAGCATATTTCAT+AGG | 0.493578 | 2_2:+42481012 | Msa0251980:CDS |
| CCATTTGTGTCCATGTACTT+TGG | 0.494118 | 2_2:+42479974 | Msa0251980:CDS |
| GGCAATGTGAGAGGGAGAGA+TGG | 0.495787 | 2_2:-42472893 | None:intergenic |
| GATCCAGTATGAGAATGAAC+AGG | 0.502115 | 2_2:-42475964 | None:intergenic |
| ATATAAAGGTGGTGCGAGAA+AGG | 0.512227 | 2_2:+42475266 | Msa0251980:CDS |
| GTACTTTGGTGCTGCCTATG+TGG | 0.514728 | 2_2:+42479988 | Msa0251980:CDS |
| AAGTGAAGAGTTTATTGTAA+GGG | 0.519105 | 2_2:+42475242 | Msa0251980:CDS |
| TTTCCGGCAGAACATTCAAA+AGG | 0.520644 | 2_2:+42475991 | Msa0251980:CDS |
| TCTTTCCCGGGTGGAAATGA+AGG | 0.529950 | 2_2:+42477857 | Msa0251980:CDS |
| GCGAAATACACATTTATGAA+AGG | 0.530750 | 2_2:-42475052 | None:intergenic |
| CAAAGCATCTCGAGAAGACA+TGG | 0.532373 | 2_2:+42477734 | Msa0251980:CDS |
| TTGCGGAACTTGAAAGCGAC+AGG | 0.536427 | 2_2:+42474438 | Msa0251980:CDS |
| CAATGTGAGAGGGAGAGATG+GGG | 0.539043 | 2_2:-42472891 | None:intergenic |
| ATAGGCAGCACCAAAGTACA+TGG | 0.540924 | 2_2:-42479984 | None:intergenic |
| CAGTCTGTGTCAAATAAGGC+TGG | 0.545568 | 2_2:-42473783 | None:intergenic |
| AATGTGAGAGGGAGAGATGG+GGG | 0.550250 | 2_2:-42472890 | None:intergenic |
| GGCGGCCAATTTCAGCTACT+GGG | 0.552817 | 2_2:+42473639 | Msa0251980:CDS |
| CATGGAGATGGACCAAGACC+TGG | 0.559952 | 2_2:+42479454 | Msa0251980:CDS |
| ATCCAAAGAAACACATGGAA+AGG | 0.561633 | 2_2:+42477800 | Msa0251980:CDS |
| AAATCTAAAGAGCCTAATGT+GGG | 0.561874 | 2_2:+42474488 | Msa0251980:CDS |
| ATTTGACACAGACTGAAATG+AGG | 0.564614 | 2_2:+42473791 | Msa0251980:CDS |
| TATCATTCATATGCTGCAGA+AGG | 0.565685 | 2_2:+42475007 | Msa0251980:CDS |
| AAAATCTAAAGAGCCTAATG+TGG | 0.566373 | 2_2:+42474487 | Msa0251980:CDS |
| TTGGTGCTGCCTATGTGGCA+TGG | 0.566887 | 2_2:+42479993 | Msa0251980:CDS |
| CATCTCTCTCGTGATCCTGA+AGG | 0.570844 | 2_2:+42473760 | Msa0251980:CDS |
| TTCATACCTTCATTTCCACC+CGG | 0.576364 | 2_2:-42477863 | None:intergenic |
| ACCAAAGAATGTGAACCCTC+AGG | 0.578927 | 2_2:+42481035 | Msa0251980:CDS |
| TTAAAAGCTGGCGAGGAAAG+AGG | 0.583165 | 2_2:+42473727 | Msa0251980:CDS |
| ATGCGCTTTGTACATGGAGA+TGG | 0.587432 | 2_2:+42479442 | Msa0251980:CDS |
| CATGCTAGCAACCTCTCCAA+TGG | 0.590466 | 2_2:-42479422 | None:intergenic |
| TCAACAAGGAACCACCTGGA+TGG | 0.593961 | 2_2:-42475348 | None:intergenic |
| ACCACACCATTGCTTTCTGG+AGG | 0.594754 | 2_2:-42475940 | None:intergenic |
| AAAGACAATGGCAATGTGAG+AGG | 0.596169 | 2_2:-42472902 | None:intergenic |
| TTTGACACAGACTGAAATGA+GGG | 0.598026 | 2_2:+42473792 | Msa0251980:CDS |
| GGGCATGATTTGTGCTATTG+CGG | 0.598516 | 2_2:+42474421 | Msa0251980:intron |
| AGTGCCGAGTGGTTAAAAGC+TGG | 0.600941 | 2_2:+42473715 | Msa0251980:CDS |
| CACATTGCCTCTAAATCCTG+AGG | 0.606507 | 2_2:-42473676 | None:intergenic |
| GAAGCGACCATATCTTTCCC+GGG | 0.606724 | 2_2:+42477845 | Msa0251980:CDS |
| AGTACTTTGTGCCATTGGAG+AGG | 0.611024 | 2_2:+42479411 | Msa0251980:CDS |
| AAAGAGTACTTGCATCCTGA+GGG | 0.611313 | 2_2:-42481050 | None:intergenic |
| TTCTGATAACCATGCCACAT+AGG | 0.613016 | 2_2:-42480002 | None:intergenic |
| CAAAGAGTACTTGCATCCTG+AGG | 0.614254 | 2_2:-42481051 | None:intergenic |
| GAGAAGACATGGAAGCTATG+TGG | 0.614861 | 2_2:+42477745 | Msa0251980:CDS |
| GTGAATACCTCCAAAGACAA+TGG | 0.616645 | 2_2:-42472914 | None:intergenic |
| GGTTATCAGAATACGAAGGA+AGG | 0.617810 | 2_2:+42480014 | Msa0251980:CDS |
| AAGACAATGGCAATGTGAGA+GGG | 0.617950 | 2_2:-42472901 | None:intergenic |
| CTCAGGATTTAGAGGCAATG+TGG | 0.620463 | 2_2:+42473677 | Msa0251980:CDS |
| ATCATTCATATGCTGCAGAA+GGG | 0.621805 | 2_2:+42475008 | Msa0251980:CDS |
| TTGTTTGTAGTTCAGGATGG+CGG | 0.628719 | 2_2:+42473621 | Msa0251980:intron |
| ATTGTAAGGGCATATAAAGG+TGG | 0.632413 | 2_2:+42475255 | Msa0251980:CDS |
| TCCTCCAGAAAGCAATGGTG+TGG | 0.633053 | 2_2:+42475939 | Msa0251980:CDS |
| CGAGTGGTTAAAAGCTGGCG+AGG | 0.653580 | 2_2:+42473720 | Msa0251980:CDS |
| TACTCTTTGGCTAAAATACG+AGG | 0.655172 | 2_2:+42481065 | Msa0251980:CDS |
| TCATACCTTCATTTCCACCC+GGG | 0.657505 | 2_2:-42477862 | None:intergenic |
| GATAGTCCTCCAGAAAGCAA+TGG | 0.662903 | 2_2:+42475934 | Msa0251980:CDS |
| ATTAAATCCAAAGAAACACA+TGG | 0.678264 | 2_2:+42477795 | Msa0251980:CDS |
| GACCAAGACCTGGAATAATG+GGG | 0.696661 | 2_2:+42479464 | Msa0251980:CDS |
| GCGACCATATCTTTCCCGGG+TGG | 0.707607 | 2_2:+42477848 | Msa0251980:CDS |
| AATCTAAAGAGCCTAATGTG+GGG | 0.713143 | 2_2:+42474489 | Msa0251980:CDS |
| GCATGGTTATCAGAATACGA+AGG | 0.742094 | 2_2:+42480010 | Msa0251980:CDS |
| TACCTGAAGTGAGTGCCGAG+TGG | 0.779736 | 2_2:+42473704 | Msa0251980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAAGATTTTATAATTTC+AGG | + | chr2_2:42474833-42474852 | Msa0251980:intron | 10.0% |
| !!! | ATTAAGATTTTATAATTTCA+GGG | + | chr2_2:42474834-42474853 | Msa0251980:intron | 10.0% |
| !! | AAATCAATATTTATTTGATT+TGG | - | chr2_2:42477530-42477549 | None:intergenic | 10.0% |
| !!! | TTTTAAATTTATAGAAAATG+TGG | - | chr2_2:42480263-42480282 | None:intergenic | 10.0% |
| !! | AATAAATTAGAAAATTTCAA+AGG | + | chr2_2:42480283-42480302 | Msa0251980:intron | 10.0% |
| !! | AATTGAACATTAAATAAAAT+AGG | + | chr2_2:42480515-42480534 | Msa0251980:intron | 10.0% |
| !! | ATTGAACATTAAATAAAATA+GGG | + | chr2_2:42480516-42480535 | Msa0251980:intron | 10.0% |
| !! | CTATTTAATACAAATTCATA+AGG | + | chr2_2:42472955-42472974 | Msa0251980:intron | 15.0% |
| !!! | AGCTATTTTATTTTGAATTT+TGG | + | chr2_2:42473010-42473029 | Msa0251980:intron | 15.0% |
| !!! | GCTATTTTATTTTGAATTTT+GGG | + | chr2_2:42473011-42473030 | Msa0251980:intron | 15.0% |
| !!! | CTATTTTATTTTGAATTTTG+GGG | + | chr2_2:42473012-42473031 | Msa0251980:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGGAAACT+CGG | + | chr2_2:42473272-42473291 | Msa0251980:intron | 15.0% |
| !! | CAACAAAAATTCATAAATAA+AGG | - | chr2_2:42473531-42473550 | None:intergenic | 15.0% |
| !!! | CTTTATTTATGAATTTTTGT+TGG | + | chr2_2:42473529-42473548 | Msa0251980:intron | 15.0% |
| !!! | TTAAGAATTTTGAAACTTAA+AGG | - | chr2_2:42473954-42473973 | None:intergenic | 15.0% |
| !! | AATGATTAATAACATTAAGT+TGG | - | chr2_2:42474780-42474799 | None:intergenic | 15.0% |
| !! | ATTATTTCATTGTTATGTTA+TGG | + | chr2_2:42474948-42474967 | Msa0251980:intron | 15.0% |
| !! | AAGAAATAACATGTTTAAAT+GGG | - | chr2_2:42476042-42476061 | None:intergenic | 15.0% |
| !! | TAAGAAATAACATGTTTAAA+TGG | - | chr2_2:42476043-42476062 | None:intergenic | 15.0% |
| !! | AAACAAAAGAACAATTAATT+TGG | - | chr2_2:42476827-42476846 | None:intergenic | 15.0% |
| !! | TATAAGTTTGTACTAAATTA+AGG | + | chr2_2:42476965-42476984 | Msa0251980:intron | 15.0% |
| !!! | TTAAAACTTTTAACAAACAA+AGG | - | chr2_2:42477067-42477086 | None:intergenic | 15.0% |
| !!! | TTGTTTGTTAAAAGTTTTAA+TGG | + | chr2_2:42477067-42477086 | Msa0251980:intron | 15.0% |
| !! | AGATCAATATTTATTTGATT+TGG | - | chr2_2:42477565-42477584 | None:intergenic | 15.0% |
| !! | ATATGAAATAACCAAAATTA+AGG | - | chr2_2:42478259-42478278 | None:intergenic | 15.0% |
| !!! | TTTTACACATTAAAAACAAA+AGG | - | chr2_2:42479341-42479360 | None:intergenic | 15.0% |
| !! | TTGAACATTAAATAAAATAG+GGG | + | chr2_2:42480517-42480536 | Msa0251980:intron | 15.0% |
| !! | ATATATTTGTCAATGTTAAA+AGG | + | chr2_2:42480634-42480653 | Msa0251980:intron | 15.0% |
| !! | TACAATATAAAATTTACAAG+AGG | + | chr2_2:42480772-42480791 | Msa0251980:intron | 15.0% |
| !! | TAAACACGAGAAATTTATTA+GGG | - | chr2_2:42473057-42473076 | None:intergenic | 20.0% |
| !! | TTAAACACGAGAAATTTATT+AGG | - | chr2_2:42473058-42473077 | None:intergenic | 20.0% |
| !!! | TAAAATTTTGCTACGTTTTA+GGG | - | chr2_2:42473218-42473237 | None:intergenic | 20.0% |
| !!! | ATAAAATTTTGCTACGTTTT+AGG | - | chr2_2:42473219-42473238 | None:intergenic | 20.0% |
| !!! | AAAACGTAGCAAAATTTTAT+AGG | + | chr2_2:42473219-42473238 | Msa0251980:intron | 20.0% |
| !! | TTTGTAAGTGTATTAAAAAG+TGG | + | chr2_2:42474063-42474082 | Msa0251980:intron | 20.0% |
| !! | AAGTGGTTTGAATTAATAAT+AGG | + | chr2_2:42474080-42474099 | Msa0251980:intron | 20.0% |
| !!! | AATATCCCAAAATTATTTCT+GGG | + | chr2_2:42474670-42474689 | Msa0251980:intron | 20.0% |
| !! | TTACATGTAAATATCCAATT+TGG | - | chr2_2:42474922-42474941 | None:intergenic | 20.0% |
| !!! | ATACTGAGTAATGAATTTTT+TGG | + | chr2_2:42475820-42475839 | Msa0251980:intron | 20.0% |
| !!! | TACTGAGTAATGAATTTTTT+GGG | + | chr2_2:42475821-42475840 | Msa0251980:intron | 20.0% |
| !! | TTCTGATTAATATATCATTG+TGG | - | chr2_2:42476549-42476568 | None:intergenic | 20.0% |
| !!! | TTTATTTTTAGTATTCACCT+TGG | - | chr2_2:42476700-42476719 | None:intergenic | 20.0% |
| !!! | CATTTTGTAGTTTATCAAAT+TGG | + | chr2_2:42476906-42476925 | Msa0251980:intron | 20.0% |
| !! | TATGTAGCAAGAAAATTATT+TGG | - | chr2_2:42477628-42477647 | None:intergenic | 20.0% |
| !! | TGAGAAAAATAATAAGAGTT+TGG | + | chr2_2:42477997-42478016 | Msa0251980:intron | 20.0% |
| !! | AGTTAGCATCAAATTATTAT+TGG | - | chr2_2:42478029-42478048 | None:intergenic | 20.0% |
| !! | CTTGATTTCTCTATTTATTT+AGG | - | chr2_2:42478106-42478125 | None:intergenic | 20.0% |
| !!! | ACAGAAGAATGAATAATTTT+AGG | - | chr2_2:42478183-42478202 | None:intergenic | 20.0% |
| !! | AAAATTATTCATTCTTCTGT+TGG | + | chr2_2:42478183-42478202 | Msa0251980:intron | 20.0% |
| !! | AAATTATTCATTCTTCTGTT+GGG | + | chr2_2:42478184-42478203 | Msa0251980:intron | 20.0% |
| !!! | GTTATAATTCTTTGACATTT+TGG | + | chr2_2:42478324-42478343 | Msa0251980:intron | 20.0% |
| !! | AAAGATAAATATGCTTAGAA+TGG | + | chr2_2:42478417-42478436 | Msa0251980:intron | 20.0% |
| !!! | TGTAGAGATTTTATAGTATT+AGG | + | chr2_2:42478918-42478937 | Msa0251980:intron | 20.0% |
| !!! | ATATTAATCTTTTTTGTTGC+AGG | + | chr2_2:42478991-42479010 | Msa0251980:intron | 20.0% |
| !!! | TACTTACAGATTTAATCTTT+TGG | - | chr2_2:42479054-42479073 | None:intergenic | 20.0% |
| !!! | TTCTTCTTTTGAATATTGTT+TGG | + | chr2_2:42479379-42479398 | Msa0251980:intron | 20.0% |
| !! | ATGTCATTATTCTACTTTAT+AGG | - | chr2_2:42479651-42479670 | None:intergenic | 20.0% |
| !! | AACACTAGTAAATCTATTAT+AGG | - | chr2_2:42479840-42479859 | None:intergenic | 20.0% |
| !! | TATAATAGATTTACTAGTGT+TGG | + | chr2_2:42479839-42479858 | Msa0251980:intron | 20.0% |
| !! | TTAAAAGTGGAAAATATTTG+TGG | - | chr2_2:42480098-42480117 | None:intergenic | 20.0% |
| !! | TTTAATCAATTAGTGTCATA+TGG | + | chr2_2:42480113-42480132 | Msa0251980:intron | 20.0% |
| !! | AATTTATAGAAAATGTGGTT+TGG | - | chr2_2:42480258-42480277 | None:intergenic | 20.0% |
| !! | GATCAAATTATTTCCTTATT+TGG | + | chr2_2:42480434-42480453 | Msa0251980:intron | 20.0% |
| !! | TAAATGACACATATATCTAA+AGG | - | chr2_2:42480554-42480573 | None:intergenic | 20.0% |
| !! | TATTTCAATGTGTATATTAC+TGG | - | chr2_2:42480586-42480605 | None:intergenic | 20.0% |
| !! | ATACAATATTAGAATGTCAT+AGG | - | chr2_2:42480686-42480705 | None:intergenic | 20.0% |
| !! | TATGACATTCTAATATTGTA+TGG | + | chr2_2:42480685-42480704 | Msa0251980:intron | 20.0% |
| !! | AAATTAAGTGTTCACTTAAT+AGG | + | chr2_2:42480892-42480911 | Msa0251980:intron | 20.0% |
| !!! | ACGAATCAATTTTTAATCAA+TGG | + | chr2_2:42480916-42480935 | Msa0251980:intron | 20.0% |
| !!! | TTATTTTGAATTTTGGGGTA+CGG | + | chr2_2:42473017-42473036 | Msa0251980:intron | 25.0% |
| !! | GTAGCAAAATTTTATAGGTT+AGG | + | chr2_2:42473224-42473243 | Msa0251980:intron | 25.0% |
| ! | TCGAAAAATCTAATAATGCA+TGG | + | chr2_2:42473302-42473321 | Msa0251980:intron | 25.0% |
| ! | CGAAAAATCTAATAATGCAT+GGG | + | chr2_2:42473303-42473322 | Msa0251980:intron | 25.0% |
| !!! | GTAAATTTTGTTTGTAGTTC+AGG | + | chr2_2:42473614-42473633 | Msa0251980:intron | 25.0% |
| ! | ATTTACATCATCCTATCTTT+AGG | + | chr2_2:42473817-42473836 | Msa0251980:intron | 25.0% |
| !! | TTGTAAGAAACACAAGTTTT+AGG | + | chr2_2:42473880-42473899 | Msa0251980:intron | 25.0% |
| !! | GATTTTCGTAAAAGAAGTTT+CGG | + | chr2_2:42473902-42473921 | Msa0251980:intron | 25.0% |
| ! | TACACTTACAAATACCTAAA+TGG | - | chr2_2:42474055-42474074 | None:intergenic | 25.0% |
| !! | GCATAATTTTGTGTATTTTC+AGG | + | chr2_2:42474184-42474203 | Msa0251980:intron | 25.0% |
| !!! | AATCCTGTATGTCTTTTTTT+TGG | + | chr2_2:42474251-42474270 | Msa0251980:intron | 25.0% |
| !!! | ATCCTGTATGTCTTTTTTTT+GGG | + | chr2_2:42474252-42474271 | Msa0251980:intron | 25.0% |
| ! | ATAAACTGTGAATAGTTGAA+AGG | - | chr2_2:42474332-42474351 | None:intergenic | 25.0% |
| ! | TTAATTGTTAACAATTGTCG+TGG | + | chr2_2:42474379-42474398 | Msa0251980:intron | 25.0% |
| !!! | GATATTTTTTCCTTGTTGTA+GGG | + | chr2_2:42474401-42474420 | Msa0251980:intron | 25.0% |
| !!! | CAACTACTTGTTATAAACTA+TGG | + | chr2_2:42474461-42474480 | Msa0251980:CDS | 25.0% |
| !!! | CTCAAACTTTTTCTGTTATT+TGG | - | chr2_2:42474590-42474609 | None:intergenic | 25.0% |
| ! | CAATATCCCAAAATTATTTC+TGG | + | chr2_2:42474669-42474688 | Msa0251980:intron | 25.0% |
| !!! | TCTGAAATTTTGATAATACG+AGG | + | chr2_2:42474862-42474881 | Msa0251980:intron | 25.0% |
| !!! | CTGAAATTTTGATAATACGA+GGG | + | chr2_2:42474863-42474882 | Msa0251980:intron | 25.0% |
| ! | TTTCATGTGATTTATGTATG+CGG | + | chr2_2:42475128-42475147 | Msa0251980:intron | 25.0% |
| ! | AAGTGAAGAGTTTATTGTAA+GGG | + | chr2_2:42475242-42475261 | Msa0251980:CDS | 25.0% |
| !! | TTTATTGTAAGGGCATATAA+AGG | + | chr2_2:42475252-42475271 | Msa0251980:CDS | 25.0% |
| ! | ATGAACTACAATTATCAACA+AGG | - | chr2_2:42475365-42475384 | None:intergenic | 25.0% |
| !!! | GAATTTTTTGGGTTATAAGT+TGG | + | chr2_2:42475832-42475851 | Msa0251980:intron | 25.0% |
| ! | ATGTTTAAATGGGATTATCA+GGG | - | chr2_2:42476032-42476051 | None:intergenic | 25.0% |
| ! | TAGATACGATATTGAGAATA+AGG | + | chr2_2:42476191-42476210 | Msa0251980:intron | 25.0% |
| !!! | ATTTTTAGCTTACTAATCCA+AGG | - | chr2_2:42476744-42476763 | None:intergenic | 25.0% |
| !!! | TGGATTAGTAAGCTAAAAAT+TGG | + | chr2_2:42476744-42476763 | Msa0251980:intron | 25.0% |
| ! | GATATAGATATAGATCTGTT+AGG | - | chr2_2:42476795-42476814 | None:intergenic | 25.0% |
| !!! | TTATCAAATTGGTTTGTATC+AGG | + | chr2_2:42476917-42476936 | Msa0251980:intron | 25.0% |
| ! | CTAAATTAAGGAATTACAGA+TGG | + | chr2_2:42476977-42476996 | Msa0251980:intron | 25.0% |
| !!! | ACAACATTGACTCTAAAAAA+GGG | - | chr2_2:42477096-42477115 | None:intergenic | 25.0% |
| !!! | TACAACATTGACTCTAAAAA+AGG | - | chr2_2:42477097-42477116 | None:intergenic | 25.0% |
| ! | CATTATGTCAATGAAATCTA+GGG | - | chr2_2:42477246-42477265 | None:intergenic | 25.0% |
| ! | ACATTATGTCAATGAAATCT+AGG | - | chr2_2:42477247-42477266 | None:intergenic | 25.0% |
| ! | AAAAAGTGATAAAACTACGA+AGG | + | chr2_2:42477282-42477301 | Msa0251980:intron | 25.0% |
| ! | AAAACTACGAAGGAAAATAT+AGG | + | chr2_2:42477292-42477311 | Msa0251980:intron | 25.0% |
| !!! | AACATAACAAAAGTTTTGTC+AGG | - | chr2_2:42477676-42477695 | None:intergenic | 25.0% |
| !! | TGGATTTAATCCATACTTTT+CGG | - | chr2_2:42477785-42477804 | None:intergenic | 25.0% |
| ! | ATTAAATCCAAAGAAACACA+TGG | + | chr2_2:42477795-42477814 | Msa0251980:CDS | 25.0% |
| !! | TTCTCTTTTTGTTGAAGTTA+TGG | + | chr2_2:42477958-42477977 | Msa0251980:intron | 25.0% |
| !! | TCTCTTTTTGTTGAAGTTAT+GGG | + | chr2_2:42477959-42477978 | Msa0251980:intron | 25.0% |
| ! | TCTTGTGTCTTTATATATAG+GGG | - | chr2_2:42478075-42478094 | None:intergenic | 25.0% |
| ! | GTCTTGTGTCTTTATATATA+GGG | - | chr2_2:42478076-42478095 | None:intergenic | 25.0% |
| !! | AGTCTTGTGTCTTTATATAT+AGG | - | chr2_2:42478077-42478096 | None:intergenic | 25.0% |
| ! | AATTATTCATTCTTCTGTTG+GGG | + | chr2_2:42478185-42478204 | Msa0251980:intron | 25.0% |
| ! | GAAATAACCAAAATTAAGGA+AGG | - | chr2_2:42478255-42478274 | None:intergenic | 25.0% |
| !! | GAAGTTAAAAAGTTCTGATT+TGG | + | chr2_2:42478346-42478365 | Msa0251980:intron | 25.0% |
| ! | TAAATAAAGTCATCTGCTAT+CGG | + | chr2_2:42478599-42478618 | Msa0251980:intron | 25.0% |
| ! | AATTCAAATGTATGCAAACT+TGG | + | chr2_2:42478781-42478800 | Msa0251980:intron | 25.0% |
| ! | ATTCAAATGTATGCAAACTT+GGG | + | chr2_2:42478782-42478801 | Msa0251980:intron | 25.0% |
| ! | TATAAAATCTCTACAATAGC+GGG | - | chr2_2:42478913-42478932 | None:intergenic | 25.0% |
| ! | CTATAAAATCTCTACAATAG+CGG | - | chr2_2:42478914-42478933 | None:intergenic | 25.0% |
| !! | GCGTAATATTTTCCAATTTA+AGG | - | chr2_2:42479101-42479120 | None:intergenic | 25.0% |
| ! | TATATTGTTCAGTACCAAAA+GGG | - | chr2_2:42479181-42479200 | None:intergenic | 25.0% |
| ! | ATATATTGTTCAGTACCAAA+AGG | - | chr2_2:42479182-42479201 | None:intergenic | 25.0% |
| ! | TTTCTTGTGATACATTCTAT+AGG | - | chr2_2:42479210-42479229 | None:intergenic | 25.0% |
| ! | CAATCTTTAGATTCATCTAA+TGG | + | chr2_2:42479243-42479262 | Msa0251980:intron | 25.0% |
| !!! | TGATAAATTGATAATGGACA+TGG | - | chr2_2:42479624-42479643 | None:intergenic | 25.0% |
| !!! | GGTTGATGATAAATTGATAA+TGG | - | chr2_2:42479630-42479649 | None:intergenic | 25.0% |
| !!! | CAAAACTAAGTTTTAGAGTT+TGG | - | chr2_2:42479703-42479722 | None:intergenic | 25.0% |
| !!! | AAACTTAGTTTTGTTTCACA+TGG | + | chr2_2:42479710-42479729 | Msa0251980:intron | 25.0% |
| ! | TATTATAGGCAAAGTTAAGA+TGG | - | chr2_2:42479826-42479845 | None:intergenic | 25.0% |
| ! | TTCACACACATAAATTTGAA+GGG | - | chr2_2:42479884-42479903 | None:intergenic | 25.0% |
| ! | TTTCACACACATAAATTTGA+AGG | - | chr2_2:42479885-42479904 | None:intergenic | 25.0% |
| ! | GGAAAATATTTGTGGAATTA+GGG | - | chr2_2:42480090-42480109 | None:intergenic | 25.0% |
| ! | TGGAAAATATTTGTGGAATT+AGG | - | chr2_2:42480091-42480110 | None:intergenic | 25.0% |
| ! | TGACACTAATTGATTAAAAG+TGG | - | chr2_2:42480111-42480130 | None:intergenic | 25.0% |
| ! | ATTAGTCAAAGTTAAGAGTT+GGG | - | chr2_2:42480162-42480181 | None:intergenic | 25.0% |
| !! | ATGATAAAATGTAGCATTGA+AGG | - | chr2_2:42480611-42480630 | None:intergenic | 25.0% |
| ! | TGAATTGAACATGAATTAGT+CGG | - | chr2_2:42480958-42480977 | None:intergenic | 25.0% |
| ! | TTCATGTTCAATTCAATGAT+TGG | + | chr2_2:42480963-42480982 | Msa0251980:intron | 25.0% |
| ! | AATTCAATGATTGGTATACA+GGG | + | chr2_2:42480972-42480991 | Msa0251980:intron | 25.0% |
| ! | TTTTTACTCTTTGACGAAGA+AGG | + | chr2_2:42473171-42473190 | Msa0251980:intron | 30.0% |
| !! | GCATTATTAGATTTTTCGAC+TGG | - | chr2_2:42473301-42473320 | None:intergenic | 30.0% |
| !! | ATTTTGTTTGTAGTTCAGGA+TGG | + | chr2_2:42473618-42473637 | Msa0251980:intron | 30.0% |
| ATTTCAGTCTGTGTCAAATA+AGG | - | chr2_2:42473790-42473809 | None:intergenic | 30.0% | |
| !! | ATCATCCTATCTTTAGGATT+TGG | + | chr2_2:42473823-42473842 | Msa0251980:intron | 30.0% |
| !! | ATTTCGAGTTTCTAGTTTGT+TGG | + | chr2_2:42473850-42473869 | Msa0251980:intron | 30.0% |
| AATGGACATTCAAATGGTAA+AGG | - | chr2_2:42474037-42474056 | None:intergenic | 30.0% | |
| TACCATTTGAATGTCCATTT+AGG | + | chr2_2:42474038-42474057 | Msa0251980:intron | 30.0% | |
| TACCTAAATGGACATTCAAA+TGG | - | chr2_2:42474043-42474062 | None:intergenic | 30.0% | |
| TTCCCAAAAAAAAGACATAC+AGG | - | chr2_2:42474257-42474276 | None:intergenic | 30.0% | |
| !!! | GGATATTTTTTCCTTGTTGT+AGG | + | chr2_2:42474400-42474419 | Msa0251980:intron | 30.0% |
| AAAATCTAAAGAGCCTAATG+TGG | + | chr2_2:42474487-42474506 | Msa0251980:CDS | 30.0% | |
| AAATCTAAAGAGCCTAATGT+GGG | + | chr2_2:42474488-42474507 | Msa0251980:CDS | 30.0% | |
| TTCTACCAAAAACTGTTGAA+TGG | + | chr2_2:42474522-42474541 | Msa0251980:CDS | 30.0% | |
| ! | ATCAACCATTCAACAGTTTT+TGG | - | chr2_2:42474530-42474549 | None:intergenic | 30.0% |
| ! | AAACTGTTGAATGGTTGATA+AGG | + | chr2_2:42474531-42474550 | Msa0251980:CDS | 30.0% |
| AGGTACTTATTAGATGTTGA+TGG | + | chr2_2:42474551-42474570 | Msa0251980:intron | 30.0% | |
| TATCCAAATTTGTCCTGAAA+TGG | + | chr2_2:42474614-42474633 | Msa0251980:intron | 30.0% | |
| TTACCATTTCAGGACAAATT+TGG | - | chr2_2:42474620-42474639 | None:intergenic | 30.0% | |
| !! | TGAAATGGTTTTACCATTTC+AGG | - | chr2_2:42474630-42474649 | None:intergenic | 30.0% |
| ! | ACAGTCCCAGAAATAATTTT+GGG | - | chr2_2:42474678-42474697 | None:intergenic | 30.0% |
| ! | TACAGTCCCAGAAATAATTT+TGG | - | chr2_2:42474679-42474698 | None:intergenic | 30.0% |
| AAACCTAGTGAATAATGTCA+GGG | - | chr2_2:42474737-42474756 | None:intergenic | 30.0% | |
| AATTTGGCCATTGAAATTGT+AGG | - | chr2_2:42474906-42474925 | None:intergenic | 30.0% | |
| TACAATTTCAATGGCCAAAT+TGG | + | chr2_2:42474905-42474924 | Msa0251980:intron | 30.0% | |
| CATTTATGAAAGGCTTGAAT+AGG | - | chr2_2:42475045-42475064 | None:intergenic | 30.0% | |
| GCGAAATACACATTTATGAA+AGG | - | chr2_2:42475055-42475074 | None:intergenic | 30.0% | |
| GAAGTGAAGAGTTTATTGTA+AGG | + | chr2_2:42475241-42475260 | Msa0251980:CDS | 30.0% | |
| ACAATATTAGCAAAGTACAC+AGG | - | chr2_2:42475435-42475454 | None:intergenic | 30.0% | |
| TATATATCTAGTGTCTCTCT+TGG | + | chr2_2:42475726-42475745 | Msa0251980:intron | 30.0% | |
| !!! | TTTTTGGGTTATAAGTTGGA+AGG | + | chr2_2:42475836-42475855 | Msa0251980:intron | 30.0% |
| TGTTTAAATGGGATTATCAG+GGG | - | chr2_2:42476031-42476050 | None:intergenic | 30.0% | |
| CATGTTTAAATGGGATTATC+AGG | - | chr2_2:42476033-42476052 | None:intergenic | 30.0% | |
| !!! | TGTCTCATGTTTTAGTTATG+TGG | + | chr2_2:42476327-42476346 | Msa0251980:intron | 30.0% |
| !! | TTTGATGAGAGTTGATAAAG+AGG | + | chr2_2:42476384-42476403 | Msa0251980:intron | 30.0% |
| !! | ACCTTACAATCGTTTTTGTA+AGG | + | chr2_2:42476418-42476437 | Msa0251980:intron | 30.0% |
| TCCTTACAAAAACGATTGTA+AGG | - | chr2_2:42476422-42476441 | None:intergenic | 30.0% | |
| GTGAAACTATTGTTGACATT+GGG | - | chr2_2:42476454-42476473 | None:intergenic | 30.0% | |
| TGTGAAATAATAGCAGTAGA+AGG | - | chr2_2:42476476-42476495 | None:intergenic | 30.0% | |
| !!! | ACCTATTTTTTTAACCATCG+AGG | + | chr2_2:42476502-42476521 | Msa0251980:intron | 30.0% |
| CGCTTTGACAAAAACTATAA+CGG | - | chr2_2:42476771-42476790 | None:intergenic | 30.0% | |
| !! | TTTTCTTGTCTGCTTTTGAA+AGG | + | chr2_2:42477015-42477034 | Msa0251980:intron | 30.0% |
| !! | TTTCTTGTCTGCTTTTGAAA+GGG | + | chr2_2:42477016-42477035 | Msa0251980:intron | 30.0% |
| ! | GGCAATTTTCTTATCTTTTG+TGG | + | chr2_2:42477313-42477332 | Msa0251980:intron | 30.0% |
| AGTTGACGTAGTTAAATTGA+TGG | + | chr2_2:42477421-42477440 | Msa0251980:intron | 30.0% | |
| AATATAGCTATGCAAGTACA+CGG | - | chr2_2:42477652-42477671 | None:intergenic | 30.0% | |
| ATGCAAAAGATGACACATAT+TGG | + | chr2_2:42477706-42477725 | Msa0251980:CDS | 30.0% | |
| TGCAAAAGATGACACATATT+GGG | + | chr2_2:42477707-42477726 | Msa0251980:CDS | 30.0% | |
| ! | TATGATTCCTTGATGACATT+TGG | + | chr2_2:42478153-42478172 | Msa0251980:intron | 30.0% |
| ATTATTCATTCTTCTGTTGG+GGG | + | chr2_2:42478186-42478205 | Msa0251980:intron | 30.0% | |
| ! | ATGAAGCAAATTCCTTGTTT+GGG | + | chr2_2:42478511-42478530 | Msa0251980:intron | 30.0% |
| !! | TTAAGTTGTTTTCCCAAACA+AGG | - | chr2_2:42478526-42478545 | None:intergenic | 30.0% |
| ATCGAAAAACAACTTATGAC+AGG | - | chr2_2:42478695-42478714 | None:intergenic | 30.0% | |
| AACTACTAATGAGACTGTTT+AGG | - | chr2_2:42478723-42478742 | None:intergenic | 30.0% | |
| ! | AGGACATGTACATGATTTTT+AGG | - | chr2_2:42478818-42478837 | None:intergenic | 30.0% |
| GTATTTAAAAGAGGTTGACA+AGG | - | chr2_2:42478838-42478857 | None:intergenic | 30.0% | |
| !! | CCTTAGCTTGTATTTAAAAG+AGG | - | chr2_2:42478847-42478866 | None:intergenic | 30.0% |
| ! | CCTCTTTTAAATACAAGCTA+AGG | + | chr2_2:42478844-42478863 | Msa0251980:intron | 30.0% |
| ATAAAATCTCTACAATAGCG+GGG | - | chr2_2:42478912-42478931 | None:intergenic | 30.0% | |
| ! | GAGATTTTATAGTATTAGGC+CGG | + | chr2_2:42478922-42478941 | Msa0251980:intron | 30.0% |
| GAACACTAAAAAAACAAAGC+CGG | - | chr2_2:42478944-42478963 | None:intergenic | 30.0% | |
| AATCTGTAAGTATACAGAAC+TGG | + | chr2_2:42479062-42479081 | Msa0251980:intron | 30.0% | |
| GGAGTTTGATTACCTTAAAT+TGG | + | chr2_2:42479086-42479105 | Msa0251980:intron | 30.0% | |
| ACATGTTCAATATGTGTTGT+AGG | - | chr2_2:42479143-42479162 | None:intergenic | 30.0% | |
| TTCAAAAGAAGAAAAACACG+AGG | - | chr2_2:42479372-42479391 | None:intergenic | 30.0% | |
| TAAAGAAGAATCTACAATGG+AGG | - | chr2_2:42480054-42480073 | None:intergenic | 30.0% | |
| GCATAAAGAAGAATCTACAA+TGG | - | chr2_2:42480057-42480076 | None:intergenic | 30.0% | |
| CATTAGTCAAAGTTAAGAGT+TGG | - | chr2_2:42480163-42480182 | None:intergenic | 30.0% | |
| ! | ACTAATGCAATTTAAAGCAG+AGG | + | chr2_2:42480176-42480195 | Msa0251980:intron | 30.0% |
| ATTGGGCTCAAAATATTTCT+TGG | - | chr2_2:42480314-42480333 | None:intergenic | 30.0% | |
| !! | AAATATTTTGAGCCCAATGA+GGG | + | chr2_2:42480316-42480335 | Msa0251980:intron | 30.0% |
| CAGTATGTATGTTCCAAATA+AGG | - | chr2_2:42480450-42480469 | None:intergenic | 30.0% | |
| ! | CTTATTTGGAACATACATAC+TGG | + | chr2_2:42480448-42480467 | Msa0251980:intron | 30.0% |
| ATACATACTGGCAAATGATA+AGG | + | chr2_2:42480460-42480479 | Msa0251980:intron | 30.0% | |
| TACATACTGGCAAATGATAA+GGG | + | chr2_2:42480461-42480480 | Msa0251980:intron | 30.0% | |
| CATTAAATAAAATAGGGGAG+AGG | + | chr2_2:42480522-42480541 | Msa0251980:intron | 30.0% | |
| ACACATATATCTAAAGGACA+TGG | - | chr2_2:42480548-42480567 | None:intergenic | 30.0% | |
| TATTGTATGGTACTAAGTGT+TGG | + | chr2_2:42480698-42480717 | Msa0251980:intron | 30.0% | |
| !! | ACTTATTTTCTCGTAGACTT+TGG | - | chr2_2:42480727-42480746 | None:intergenic | 30.0% |
| AACAAAAGCTATTCATCACT+AGG | - | chr2_2:42480835-42480854 | None:intergenic | 30.0% | |
| !! | GAACACTTAATTTAGTTCTC+TGG | - | chr2_2:42480885-42480904 | None:intergenic | 30.0% |
| AATTGAACATGAATTAGTCG+GGG | - | chr2_2:42480956-42480975 | None:intergenic | 30.0% | |
| GAATTGAACATGAATTAGTC+GGG | - | chr2_2:42480957-42480976 | None:intergenic | 30.0% | |
| CAATTCAATGATTGGTATAC+AGG | + | chr2_2:42480971-42480990 | Msa0251980:intron | 30.0% | |
| TTCGTTCAAGCATATTTCAT+AGG | + | chr2_2:42481012-42481031 | Msa0251980:CDS | 30.0% | |
| GTAACGATTGAATGAAGCTT+AGG | + | chr2_2:42473107-42473126 | Msa0251980:intron | 35.0% | |
| ACATTTACAATCAACCCACA+AGG | - | chr2_2:42473470-42473489 | None:intergenic | 35.0% | |
| ATTTGACACAGACTGAAATG+AGG | + | chr2_2:42473791-42473810 | Msa0251980:CDS | 35.0% | |
| TTTGACACAGACTGAAATGA+GGG | + | chr2_2:42473792-42473811 | Msa0251980:CDS | 35.0% | |
| TAGTGCCAAATCCTAAAGAT+AGG | - | chr2_2:42473831-42473850 | None:intergenic | 35.0% | |
| TCGTAAAAGAAGTTTCGGTA+TGG | + | chr2_2:42473907-42473926 | Msa0251980:intron | 35.0% | |
| ! | TAGCTGACATTGTTATTAGC+AGG | + | chr2_2:42474210-42474229 | Msa0251980:CDS | 35.0% |
| AATCTAAAGAGCCTAATGTG+GGG | + | chr2_2:42474489-42474508 | Msa0251980:CDS | 35.0% | |
| AACCATTTCAACTTAGTCCT+CGG | + | chr2_2:42474640-42474659 | Msa0251980:intron | 35.0% | |
| GAAACCTAGTGAATAATGTC+AGG | - | chr2_2:42474738-42474757 | None:intergenic | 35.0% | |
| !! | ACATTAAGTTGGTGATGTAG+AGG | - | chr2_2:42474769-42474788 | None:intergenic | 35.0% |
| GCTCTACAAATATCATCTGA+AGG | + | chr2_2:42474803-42474822 | Msa0251980:intron | 35.0% | |
| TTGAAATTGTAGGACCGTAT+CGG | - | chr2_2:42474896-42474915 | None:intergenic | 35.0% | |
| ATACGGTCCTACAATTTCAA+TGG | + | chr2_2:42474896-42474915 | Msa0251980:intron | 35.0% | |
| TATCATTCATATGCTGCAGA+AGG | + | chr2_2:42475007-42475026 | Msa0251980:CDS | 35.0% | |
| ATCATTCATATGCTGCAGAA+GGG | + | chr2_2:42475008-42475027 | Msa0251980:CDS | 35.0% | |
| TGTTTCAGAACAAACACTCA+TGG | - | chr2_2:42475187-42475206 | None:intergenic | 35.0% | |
| ! | ATTGTAAGGGCATATAAAGG+TGG | + | chr2_2:42475255-42475274 | Msa0251980:CDS | 35.0% |
| ACAAATCAACATTGCGCTAT+TGG | + | chr2_2:42475295-42475314 | Msa0251980:CDS | 35.0% | |
| ! | TCAAAGAAAGTTTTCCATCC+AGG | + | chr2_2:42475334-42475353 | Msa0251980:CDS | 35.0% |
| TATAGTATGCATCCACTCTT+TGG | + | chr2_2:42475551-42475570 | Msa0251980:intron | 35.0% | |
| !! | AATTACCGATTCATCCATTG+AGG | + | chr2_2:42475628-42475647 | Msa0251980:intron | 35.0% |
| AATCTCGACAAGTAGTAATG+TGG | + | chr2_2:42475773-42475792 | Msa0251980:intron | 35.0% | |
| ATCTCGACAAGTAGTAATGT+GGG | + | chr2_2:42475774-42475793 | Msa0251980:intron | 35.0% | |
| ! | ATCAACAGATTTTCTGCACA+AGG | - | chr2_2:42475914-42475933 | None:intergenic | 35.0% |
| GTTTAAATGGGATTATCAGG+GGG | - | chr2_2:42476030-42476049 | None:intergenic | 35.0% | |
| ACAAAAACGATTGTAAGGTG+AGG | - | chr2_2:42476417-42476436 | None:intergenic | 35.0% | |
| ! | CGTTTTTGTAAGGATGAGTT+AGG | + | chr2_2:42476428-42476447 | Msa0251980:intron | 35.0% |
| GGTGAAACTATTGTTGACAT+TGG | - | chr2_2:42476455-42476474 | None:intergenic | 35.0% | |
| GCCTCGATGGTTAAAAAAAT+AGG | - | chr2_2:42476506-42476525 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTAACCATCGAGGC+AGG | + | chr2_2:42476506-42476525 | Msa0251980:intron | 35.0% |
| !! | CACTAGTCTTAACAGAGAAA+AGG | - | chr2_2:42476597-42476616 | None:intergenic | 35.0% |
| TGTTGAAAAAAGTAGTGCCT+TGG | + | chr2_2:42476724-42476743 | Msa0251980:intron | 35.0% | |
| TAAGGAATTACAGATGGTGA+TGG | + | chr2_2:42476983-42477002 | Msa0251980:intron | 35.0% | |
| GCGAAAAAGATACAGAACTA+TGG | - | chr2_2:42477207-42477226 | None:intergenic | 35.0% | |
| GCATTCAATTGTACAGATTG+TGG | + | chr2_2:42477382-42477401 | Msa0251980:intron | 35.0% | |
| GCTAAGACACAAAGTAAGAA+CGG | - | chr2_2:42477448-42477467 | None:intergenic | 35.0% | |
| ATATAGCTATGCAAGTACAC+GGG | - | chr2_2:42477651-42477670 | None:intergenic | 35.0% | |
| ATCCTGTAATCCGAAAAGTA+TGG | + | chr2_2:42477772-42477791 | Msa0251980:CDS | 35.0% | |
| ! | ATCCATACTTTTCGGATTAC+AGG | - | chr2_2:42477777-42477796 | None:intergenic | 35.0% |
| ATCCAAAGAAACACATGGAA+AGG | + | chr2_2:42477800-42477819 | Msa0251980:CDS | 35.0% | |
| TTATTCATTCTTCTGTTGGG+GGG | + | chr2_2:42478187-42478206 | Msa0251980:intron | 35.0% | |
| ! | GTCGTTTCCTTCCTTAATTT+TGG | + | chr2_2:42478245-42478264 | Msa0251980:intron | 35.0% |
| TAGAGTGACATTTCAAAGAC+AGG | - | chr2_2:42478445-42478464 | None:intergenic | 35.0% | |
| AATGAAATTGTCCGTGTAAG+AGG | + | chr2_2:42478478-42478497 | Msa0251980:intron | 35.0% | |
| GATGAAGCAAATTCCTTGTT+TGG | + | chr2_2:42478510-42478529 | Msa0251980:intron | 35.0% | |
| TATGCAAACTTGGGCTATTT+AGG | + | chr2_2:42478791-42478810 | Msa0251980:intron | 35.0% | |
| !! | TTGACTTTTCCACTGCTTTT+TGG | + | chr2_2:42479488-42479507 | Msa0251980:CDS | 35.0% |
| TGTTTCACATGGTAAAAGTC+CGG | + | chr2_2:42479721-42479740 | Msa0251980:intron | 35.0% | |
| !! | TGAAATGTCGTGTTTTGTTC+AGG | + | chr2_2:42479900-42479919 | Msa0251980:intron | 35.0% |
| !! | GAAATGTCGTGTTTTGTTCA+GGG | + | chr2_2:42479901-42479920 | Msa0251980:intron | 35.0% |
| ATATGGAAATCCATGTCCAT+AGG | + | chr2_2:42480130-42480149 | Msa0251980:intron | 35.0% | |
| !! | GAAATATTTTGAGCCCAATG+AGG | + | chr2_2:42480315-42480334 | Msa0251980:intron | 35.0% |
| ! | TTTGGAATTGGAGACTTTGA+TGG | + | chr2_2:42480379-42480398 | Msa0251980:intron | 35.0% |
| TTGGAATTGGAGACTTTGAT+GGG | + | chr2_2:42480380-42480399 | Msa0251980:intron | 35.0% | |
| AGACTTTGATGGGAAAAGTT+TGG | + | chr2_2:42480390-42480409 | Msa0251980:intron | 35.0% | |
| TAAAAGGAGAGTCAAGTTTC+AGG | + | chr2_2:42480650-42480669 | Msa0251980:intron | 35.0% | |
| AAGCTATTCATCACTAGGTT+GGG | - | chr2_2:42480830-42480849 | None:intergenic | 35.0% | |
| AAAGCTATTCATCACTAGGT+TGG | - | chr2_2:42480831-42480850 | None:intergenic | 35.0% | |
| TATGCTTGAACGAAAAACTC+TGG | - | chr2_2:42481006-42481025 | None:intergenic | 35.0% | |
| TACTCTTTGGCTAAAATACG+AGG | + | chr2_2:42481065-42481084 | Msa0251980:CDS | 35.0% | |
| AAGACAATGGCAATGTGAGA+GGG | - | chr2_2:42472904-42472923 | None:intergenic | 40.0% | |
| AAAGACAATGGCAATGTGAG+AGG | - | chr2_2:42472905-42472924 | None:intergenic | 40.0% | |
| TCTCACATTGCCATTGTCTT+TGG | + | chr2_2:42472904-42472923 | Msa0251980:five_prime_UTR | 40.0% | |
| GTGAATACCTCCAAAGACAA+TGG | - | chr2_2:42472917-42472936 | None:intergenic | 40.0% | |
| ! | TTTGGGGTACGGATGAATTA+TGG | + | chr2_2:42473028-42473047 | Msa0251980:intron | 40.0% |
| TTGTTTGTAGTTCAGGATGG+CGG | + | chr2_2:42473621-42473640 | Msa0251980:intron | 40.0% | |
| ATCATCCCAGTAGCTGAAAT+TGG | - | chr2_2:42473647-42473666 | None:intergenic | 40.0% | |
| TGTTGATCCTCAGGATTTAG+AGG | + | chr2_2:42473669-42473688 | Msa0251980:CDS | 40.0% | |
| ACAAATCATGCCCTACAACA+AGG | - | chr2_2:42474414-42474433 | None:intergenic | 40.0% | |
| !! | TTGGGATATTGATAATGCCG+AGG | - | chr2_2:42474660-42474679 | None:intergenic | 40.0% |
| CATCCCTGACATTATTCACT+AGG | + | chr2_2:42474731-42474750 | Msa0251980:intron | 40.0% | |
| TGTTATGTTATGGTCCACCA+AGG | + | chr2_2:42474958-42474977 | Msa0251980:intron | 40.0% | |
| ACTGTAAGCTGCATTAACCT+TGG | - | chr2_2:42474978-42474997 | None:intergenic | 40.0% | |
| AATGCAGCTTACAGTGCATT+AGG | + | chr2_2:42474983-42475002 | Msa0251980:intron | 40.0% | |
| ! | GTGTGACACCCATTTAAGAT+AGG | - | chr2_2:42475083-42475102 | None:intergenic | 40.0% |
| CAAACACTCATGGTAACTAC+TGG | - | chr2_2:42475177-42475196 | None:intergenic | 40.0% | |
| ATATAAAGGTGGTGCGAGAA+AGG | + | chr2_2:42475266-42475285 | Msa0251980:CDS | 40.0% | |
| ! | AAGAAAGTTTTCCATCCAGG+TGG | + | chr2_2:42475337-42475356 | Msa0251980:intron | 40.0% |
| ATTATCAACAAGGAACCACC+TGG | - | chr2_2:42475355-42475374 | None:intergenic | 40.0% | |
| GTACTGTCTGTGTATAGTGT+TGG | + | chr2_2:42475507-42475526 | Msa0251980:intron | 40.0% | |
| AGTGGATGCATACTATAGCA+AGG | - | chr2_2:42475548-42475567 | None:intergenic | 40.0% | |
| AGAGAAAAGAAGCCAAAGAG+TGG | - | chr2_2:42475566-42475585 | None:intergenic | 40.0% | |
| ATGCACCTCAATGGATGAAT+CGG | - | chr2_2:42475636-42475655 | None:intergenic | 40.0% | |
| GTTGGAAGGAAAGCTGAAAT+TGG | + | chr2_2:42475850-42475869 | Msa0251980:intron | 40.0% | |
| GTTCCTGTTCATTCTCATAC+TGG | + | chr2_2:42475961-42475980 | Msa0251980:CDS | 40.0% | |
| GATCCAGTATGAGAATGAAC+AGG | - | chr2_2:42475967-42475986 | None:intergenic | 40.0% | |
| ! | TCATACTGGATCTCCTTTTC+CGG | + | chr2_2:42475975-42475994 | Msa0251980:CDS | 40.0% |
| TTTGAATGTTCTGCCGGAAA+AGG | - | chr2_2:42475991-42476010 | None:intergenic | 40.0% | |
| TTTCCGGCAGAACATTCAAA+AGG | + | chr2_2:42475991-42476010 | Msa0251980:CDS | 40.0% | |
| ! | TGACCTTTTGAATGTTCTGC+CGG | - | chr2_2:42475997-42476016 | None:intergenic | 40.0% |
| CCAAATTCCATTCTAGACAG+TGG | - | chr2_2:42476090-42476109 | None:intergenic | 40.0% | |
| ! | CCACTGTCTAGAATGGAATT+TGG | + | chr2_2:42476087-42476106 | Msa0251980:intron | 40.0% |
| AAGTCCTATCTATCCGATGT+GGG | - | chr2_2:42476365-42476384 | None:intergenic | 40.0% | |
| AAAGTCCTATCTATCCGATG+TGG | - | chr2_2:42476366-42476385 | None:intergenic | 40.0% | |
| !! | GATGAGAGTTGATAAAGAGG+AGG | + | chr2_2:42476387-42476406 | Msa0251980:intron | 40.0% |
| GGTACTATGAATGGGACAAT+TGG | - | chr2_2:42476634-42476653 | None:intergenic | 40.0% | |
| ACCACTCAGGTACTATGAAT+GGG | - | chr2_2:42476642-42476661 | None:intergenic | 40.0% | |
| TACCACTCAGGTACTATGAA+TGG | - | chr2_2:42476643-42476662 | None:intergenic | 40.0% | |
| TTTCCAAGTCTTTACCACTC+AGG | - | chr2_2:42476655-42476674 | None:intergenic | 40.0% | |
| GTGGTAAAGACTTGGAAATC+AGG | + | chr2_2:42476657-42476676 | Msa0251980:intron | 40.0% | |
| ATCAGGTAGTGTCCAACTTA+AGG | + | chr2_2:42476674-42476693 | Msa0251980:intron | 40.0% | |
| !! | TATTCACCTTGGCCTTAAGT+TGG | - | chr2_2:42476689-42476708 | None:intergenic | 40.0% |
| TCAATGTTGCAGGAAACAGT+CGG | - | chr2_2:42476870-42476889 | None:intergenic | 40.0% | |
| CTGAACAACATCAATGTTGC+AGG | - | chr2_2:42476880-42476899 | None:intergenic | 40.0% | |
| CACCTTTCCATGTGTTTCTT+TGG | - | chr2_2:42477805-42477824 | None:intergenic | 40.0% | |
| TCGTTGTTGTACCTCTTACA+CGG | - | chr2_2:42478492-42478511 | None:intergenic | 40.0% | |
| CTGTAAGTATACAGAACTGG+AGG | + | chr2_2:42479065-42479084 | Msa0251980:intron | 40.0% | |
| ! | GAAAAAGTCGAGAACCCTTT+TGG | + | chr2_2:42479164-42479183 | Msa0251980:intron | 40.0% |
| AAGTCAATCCCCATTATTCC+AGG | - | chr2_2:42479475-42479494 | None:intergenic | 40.0% | |
| CAAGTAAAGCCAAAAAGCAG+TGG | - | chr2_2:42479500-42479519 | None:intergenic | 40.0% | |
| TTACCGTTAGAACCATACGT+CGG | + | chr2_2:42479543-42479562 | Msa0251980:intron | 40.0% | |
| !! | AAACCGACGTATGGTTCTAA+CGG | - | chr2_2:42479549-42479568 | None:intergenic | 40.0% |
| ATTATGCACAAACCGACGTA+TGG | - | chr2_2:42479558-42479577 | None:intergenic | 40.0% | |
| AGAAAGCTTCTACTAGAAGC+TGG | - | chr2_2:42479752-42479771 | None:intergenic | 40.0% | |
| !! | TCGTGTTTTGTTCAGGGAAT+TGG | + | chr2_2:42479907-42479926 | Msa0251980:intron | 40.0% |
| !! | CGTGTTTTGTTCAGGGAATT+GGG | + | chr2_2:42479908-42479927 | Msa0251980:intron | 40.0% |
| CCAAAGTACATGGACACAAA+TGG | - | chr2_2:42479977-42479996 | None:intergenic | 40.0% | |
| CCATTTGTGTCCATGTACTT+TGG | + | chr2_2:42479974-42479993 | Msa0251980:CDS | 40.0% | |
| TTCTGATAACCATGCCACAT+AGG | - | chr2_2:42480005-42480024 | None:intergenic | 40.0% | |
| GCATGGTTATCAGAATACGA+AGG | + | chr2_2:42480010-42480029 | Msa0251980:CDS | 40.0% | |
| GGTTATCAGAATACGAAGGA+AGG | + | chr2_2:42480014-42480033 | Msa0251980:CDS | 40.0% | |
| AAGAGTTGGGAAAACACCTA+TGG | - | chr2_2:42480149-42480168 | None:intergenic | 40.0% | |
| ! | TTTAAAGCAGAGGCAGAACT+AGG | + | chr2_2:42480186-42480205 | Msa0251980:intron | 40.0% |
| TTTGATGGGAAAAGTTTGGC+AGG | + | chr2_2:42480394-42480413 | Msa0251980:intron | 40.0% | |
| ! | GCAGGAAGGAATAGTTGATA+GGG | + | chr2_2:42480412-42480431 | Msa0251980:intron | 40.0% |
| !! | AAAGAGTACTTGCATCCTGA+GGG | - | chr2_2:42481053-42481072 | None:intergenic | 40.0% |
| CACATTGCCATTGTCTTTGG+AGG | + | chr2_2:42472907-42472926 | Msa0251980:five_prime_UTR | 45.0% | |
| ACCAATTCACTGTGCACTAG+TGG | + | chr2_2:42473326-42473345 | Msa0251980:intron | 45.0% | |
| CCAATTCACTGTGCACTAGT+GGG | + | chr2_2:42473327-42473346 | Msa0251980:intron | 45.0% | |
| CAATTCACTGTGCACTAGTG+GGG | + | chr2_2:42473328-42473347 | Msa0251980:intron | 45.0% | |
| ATGCCAACAATTCCTGTGTC+GGG | - | chr2_2:42473391-42473410 | None:intergenic | 45.0% | |
| GATGCCAACAATTCCTGTGT+CGG | - | chr2_2:42473392-42473411 | None:intergenic | 45.0% | |
| ! | TTGGCATCTGAGACCTAAAG+AGG | + | chr2_2:42473404-42473423 | Msa0251980:intron | 45.0% |
| TAGCCTGGTGGTATAGACAT+CGG | - | chr2_2:42473445-42473464 | None:intergenic | 45.0% | |
| ! | GGATGATTGTGTTGATCCTC+AGG | + | chr2_2:42473660-42473679 | Msa0251980:CDS | 45.0% |
| CACATTGCCTCTAAATCCTG+AGG | - | chr2_2:42473679-42473698 | None:intergenic | 45.0% | |
| CTCAGGATTTAGAGGCAATG+TGG | + | chr2_2:42473677-42473696 | Msa0251980:CDS | 45.0% | |
| TTAAAAGCTGGCGAGGAAAG+AGG | + | chr2_2:42473727-42473746 | Msa0251980:CDS | 45.0% | |
| CAGTCTGTGTCAAATAAGGC+TGG | - | chr2_2:42473786-42473805 | None:intergenic | 45.0% | |
| ! | GGGCATGATTTGTGCTATTG+CGG | + | chr2_2:42474421-42474440 | Msa0251980:intron | 45.0% |
| AGTTGCATAAGCCCCACATT+AGG | - | chr2_2:42474503-42474522 | None:intergenic | 45.0% | |
| ! | TGCCGAGGACTAAGTTGAAA+TGG | - | chr2_2:42474645-42474664 | None:intergenic | 45.0% |
| ACGAGGGATTTAAGCCGATA+CGG | + | chr2_2:42474879-42474898 | Msa0251980:intron | 45.0% | |
| GTAAGCTGCATTAACCTTGG+TGG | - | chr2_2:42474975-42474994 | None:intergenic | 45.0% | |
| TCGCTGCTGCCTATCTTAAA+TGG | + | chr2_2:42475071-42475090 | Msa0251980:CDS | 45.0% | |
| CGCTGCTGCCTATCTTAAAT+GGG | + | chr2_2:42475072-42475091 | Msa0251980:CDS | 45.0% | |
| TCGACAAGTAGTAATGTGGG+AGG | + | chr2_2:42475777-42475796 | Msa0251980:intron | 45.0% | |
| GATAGTCCTCCAGAAAGCAA+TGG | + | chr2_2:42475934-42475953 | Msa0251980:CDS | 45.0% | |
| CAGAACACCACTGTCTAGAA+TGG | + | chr2_2:42476080-42476099 | Msa0251980:intron | 45.0% | |
| TCCCTAAAACACTCCACCTA+TGG | + | chr2_2:42476121-42476140 | Msa0251980:intron | 45.0% | |
| !! | GCCATAGGTGGAGTGTTTTA+GGG | - | chr2_2:42476125-42476144 | None:intergenic | 45.0% |
| !! | TGCCATAGGTGGAGTGTTTT+AGG | - | chr2_2:42476126-42476145 | None:intergenic | 45.0% |
| AATCCAAATGCGTGATCCAG+TGG | - | chr2_2:42476155-42476174 | None:intergenic | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | + | chr2_2:42476349-42476368 | Msa0251980:intron | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | - | chr2_2:42476358-42476377 | None:intergenic | 45.0% | |
| TATCTATCCGATGTGGGACT+TGG | - | chr2_2:42476359-42476378 | None:intergenic | 45.0% | |
| AAGTCCCACATCGGATAGAT+AGG | + | chr2_2:42476358-42476377 | Msa0251980:intron | 45.0% | |
| ! | GTAGAATTTTCCTGCCTCGA+TGG | - | chr2_2:42476519-42476538 | None:intergenic | 45.0% |
| TAAGACTAGTGACCAGTTCC+AGG | + | chr2_2:42476606-42476625 | Msa0251980:intron | 45.0% | |
| TGAATGGGACAATTGGAACC+TGG | - | chr2_2:42476627-42476646 | None:intergenic | 45.0% | |
| TCCCATTCATAGTACCTGAG+TGG | + | chr2_2:42476638-42476657 | Msa0251980:intron | 45.0% | |
| GTACCTGAGTGGTAAAGACT+TGG | + | chr2_2:42476649-42476668 | Msa0251980:intron | 45.0% | |
| TAGTGTCCAACTTAAGGCCA+AGG | + | chr2_2:42476680-42476699 | Msa0251980:intron | 45.0% | |
| TAAAGTGTGTCCGAAGCTTG+AGG | + | chr2_2:42477146-42477165 | Msa0251980:intron | 45.0% | |
| ACTAGCAAAGCCTCAAGCTT+CGG | - | chr2_2:42477159-42477178 | None:intergenic | 45.0% | |
| CATGTCTTCTCGAGATGCTT+TGG | - | chr2_2:42477736-42477755 | None:intergenic | 45.0% | |
| ! | CAAAGCATCTCGAGAAGACA+TGG | + | chr2_2:42477734-42477753 | Msa0251980:CDS | 45.0% |
| GAGAAGACATGGAAGCTATG+TGG | + | chr2_2:42477745-42477764 | Msa0251980:CDS | 45.0% | |
| AGAAGCGACCATATCTTTCC+CGG | + | chr2_2:42477844-42477863 | Msa0251980:CDS | 45.0% | |
| AGGCATGCCAAATGTCATCA+AGG | - | chr2_2:42478163-42478182 | None:intergenic | 45.0% | |
| CAGAGAGTTAGGCTCATCAT+GGG | - | chr2_2:42478884-42478903 | None:intergenic | 45.0% | |
| ACAGAGAGTTAGGCTCATCA+TGG | - | chr2_2:42478885-42478904 | None:intergenic | 45.0% | |
| CAGACAGTACTTTGTGCCAT+TGG | + | chr2_2:42479406-42479425 | Msa0251980:intron | 45.0% | |
| ! | AGTACTTTGTGCCATTGGAG+AGG | + | chr2_2:42479411-42479430 | Msa0251980:CDS | 45.0% |
| ATGCGCTTTGTACATGGAGA+TGG | + | chr2_2:42479442-42479461 | Msa0251980:CDS | 45.0% | |
| TGGACCAAGACCTGGAATAA+TGG | + | chr2_2:42479462-42479481 | Msa0251980:CDS | 45.0% | |
| GGACCAAGACCTGGAATAAT+GGG | + | chr2_2:42479463-42479482 | Msa0251980:CDS | 45.0% | |
| GACCAAGACCTGGAATAATG+GGG | + | chr2_2:42479464-42479483 | Msa0251980:CDS | 45.0% | |
| ATCCCCATTATTCCAGGTCT+TGG | - | chr2_2:42479469-42479488 | None:intergenic | 45.0% | |
| CTACTAGAAGCTGGAAAAGC+CGG | - | chr2_2:42479743-42479762 | None:intergenic | 45.0% | |
| ATAGGCAGCACCAAAGTACA+TGG | - | chr2_2:42479987-42480006 | None:intergenic | 45.0% | |
| ! | GAAGGAAGGTACATCTGATC+TGG | + | chr2_2:42480028-42480047 | Msa0251980:intron | 45.0% |
| TGGGAAAACACCTATGGACA+TGG | - | chr2_2:42480143-42480162 | None:intergenic | 45.0% | |
| GTCTCCAATTCCAAACAGCA+CGG | - | chr2_2:42480374-42480393 | None:intergenic | 45.0% | |
| ATGGGAAAAGTTTGGCAGGA+AGG | + | chr2_2:42480398-42480417 | Msa0251980:intron | 45.0% | |
| GGCAGGAAGGAATAGTTGAT+AGG | + | chr2_2:42480411-42480430 | Msa0251980:intron | 45.0% | |
| ACTGGCAAATGATAAGGGAG+AGG | + | chr2_2:42480466-42480485 | Msa0251980:intron | 45.0% | |
| ACCAAAGAATGTGAACCCTC+AGG | + | chr2_2:42481035-42481054 | Msa0251980:CDS | 45.0% | |
| TCCTGAGGGTTCACATTCTT+TGG | - | chr2_2:42481039-42481058 | None:intergenic | 45.0% | |
| !! | CAAAGAGTACTTGCATCCTG+AGG | - | chr2_2:42481054-42481073 | None:intergenic | 45.0% |
| CTCAGGATGCAAGTACTCTT+TGG | + | chr2_2:42481052-42481071 | Msa0251980:CDS | 45.0% | |
| !!! | AATTTGTTTTTTTTTTTTTT+TGG | + | chr2_2:42473264-42473283 | Msa0251980:intron | 5.0% |
| AATGTGAGAGGGAGAGATGG+GGG | - | chr2_2:42472893-42472912 | None:intergenic | 50.0% | |
| CAATGTGAGAGGGAGAGATG+GGG | - | chr2_2:42472894-42472913 | None:intergenic | 50.0% | |
| GCAATGTGAGAGGGAGAGAT+GGG | - | chr2_2:42472895-42472914 | None:intergenic | 50.0% | |
| CCCACTAGTGCACAGTGAAT+TGG | - | chr2_2:42473330-42473349 | None:intergenic | 50.0% | |
| TGTATAGACTGACCCGACAC+AGG | + | chr2_2:42473376-42473395 | Msa0251980:intron | 50.0% | |
| TGACCCGACACAGGAATTGT+TGG | + | chr2_2:42473385-42473404 | Msa0251980:intron | 50.0% | |
| ! | CTAGGAGTGTGCTCCTCTTT+AGG | - | chr2_2:42473420-42473439 | None:intergenic | 50.0% |
| ! | CTAAAGAGGAGCACACTCCT+AGG | + | chr2_2:42473418-42473437 | Msa0251980:intron | 50.0% |
| GTGGTATAGACATCGGACCT+AGG | - | chr2_2:42473438-42473457 | None:intergenic | 50.0% | |
| TACCACCAGGCTAATCCTTG+TGG | + | chr2_2:42473452-42473471 | Msa0251980:intron | 50.0% | |
| ACCACCAGGCTAATCCTTGT+GGG | + | chr2_2:42473453-42473472 | Msa0251980:intron | 50.0% | |
| !! | TCAACCCACAAGGATTAGCC+TGG | - | chr2_2:42473460-42473479 | None:intergenic | 50.0% |
| ! | AGTGCCGAGTGGTTAAAAGC+TGG | + | chr2_2:42473715-42473734 | Msa0251980:CDS | 50.0% |
| ! | CTCGCCAGCTTTTAACCACT+CGG | - | chr2_2:42473722-42473741 | None:intergenic | 50.0% |
| CATCTCTCTCGTGATCCTGA+AGG | + | chr2_2:42473760-42473779 | Msa0251980:CDS | 50.0% | |
| !! | GTCAAATAAGGCTGGCCTTC+AGG | - | chr2_2:42473778-42473797 | None:intergenic | 50.0% |
| TTGCGGAACTTGAAAGCGAC+AGG | + | chr2_2:42474438-42474457 | Msa0251980:CDS | 50.0% | |
| TCAACAAGGAACCACCTGGA+TGG | - | chr2_2:42475351-42475370 | None:intergenic | 50.0% | |
| CAAGCACACATGCACCTCAA+TGG | - | chr2_2:42475645-42475664 | None:intergenic | 50.0% | |
| TCCTCCAGAAAGCAATGGTG+TGG | + | chr2_2:42475939-42475958 | Msa0251980:CDS | 50.0% | |
| ACCACACCATTGCTTTCTGG+AGG | - | chr2_2:42475943-42475962 | None:intergenic | 50.0% | |
| GGAACCACACCATTGCTTTC+TGG | - | chr2_2:42475946-42475965 | None:intergenic | 50.0% | |
| AAACACTCCACCTATGGCAG+TGG | + | chr2_2:42476127-42476146 | Msa0251980:intron | 50.0% | |
| GGACAATTGGAACCTGGAAC+TGG | - | chr2_2:42476621-42476640 | None:intergenic | 50.0% | |
| TGTTGCAGGAAACAGTCGGA+TGG | - | chr2_2:42476866-42476885 | None:intergenic | 50.0% | |
| GAAGCGACCATATCTTTCCC+GGG | + | chr2_2:42477845-42477864 | Msa0251980:CDS | 50.0% | |
| CATGCTAGCAACCTCTCCAA+TGG | - | chr2_2:42479425-42479444 | None:intergenic | 50.0% | |
| GCTAGCATGCGCTTTGTACA+TGG | + | chr2_2:42479436-42479455 | Msa0251980:CDS | 50.0% | |
| TGTTCAGGGAATTGGGCTTC+AGG | + | chr2_2:42479915-42479934 | Msa0251980:intron | 50.0% | |
| GTTCAGGGAATTGGGCTTCA+GGG | + | chr2_2:42479916-42479935 | Msa0251980:intron | 50.0% | |
| !! | GTACTTTGGTGCTGCCTATG+TGG | + | chr2_2:42479988-42480007 | Msa0251980:CDS | 50.0% |
| ! | ATTTTGAGCCCAATGAGGGC+CGG | + | chr2_2:42480320-42480339 | Msa0251980:intron | 50.0% |
| TTCCAAACAGCACGGACGAA+GGG | - | chr2_2:42480366-42480385 | None:intergenic | 50.0% | |
| ATTCCAAACAGCACGGACGA+AGG | - | chr2_2:42480367-42480386 | None:intergenic | 50.0% | |
| !! | TCGTCCGTGCTGTTTGGAAT+TGG | + | chr2_2:42480367-42480386 | Msa0251980:intron | 50.0% |
| ACCTCACTGTTCACCATGCA+TGG | - | chr2_2:42480492-42480511 | None:intergenic | 50.0% | |
| GGCAATGTGAGAGGGAGAGA+TGG | - | chr2_2:42472896-42472915 | None:intergenic | 55.0% | |
| GGTCCGATGTCTATACCACC+AGG | + | chr2_2:42473439-42473458 | Msa0251980:intron | 55.0% | |
| !! | ACCCACAAGGATTAGCCTGG+TGG | - | chr2_2:42473457-42473476 | None:intergenic | 55.0% |
| TGGCGGCCAATTTCAGCTAC+TGG | + | chr2_2:42473638-42473657 | Msa0251980:CDS | 55.0% | |
| GGCGGCCAATTTCAGCTACT+GGG | + | chr2_2:42473639-42473658 | Msa0251980:CDS | 55.0% | |
| !! | TACCTGAAGTGAGTGCCGAG+TGG | + | chr2_2:42473704-42473723 | Msa0251980:CDS | 55.0% |
| AACCACTCGGCACTCACTTC+AGG | - | chr2_2:42473709-42473728 | None:intergenic | 55.0% | |
| CGAGTGGTTAAAAGCTGGCG+AGG | + | chr2_2:42473720-42473739 | Msa0251980:CDS | 55.0% | |
| GCTCCACTGGATCACGCATT+TGG | + | chr2_2:42476149-42476168 | Msa0251980:intron | 55.0% | |
| GCGGGGTCTAACAGAGAGTT+AGG | - | chr2_2:42478895-42478914 | None:intergenic | 55.0% | |
| CATGGAGATGGACCAAGACC+TGG | + | chr2_2:42479454-42479473 | Msa0251980:CDS | 55.0% | |
| !! | TTGGTGCTGCCTATGTGGCA+TGG | + | chr2_2:42479993-42480012 | Msa0251980:CDS | 55.0% |
| ! | TTTTGAGCCCAATGAGGGCC+GGG | + | chr2_2:42480321-42480340 | Msa0251980:intron | 55.0% |
| GACGAAGGGAAGGGAGAACT+AGG | - | chr2_2:42480352-42480371 | None:intergenic | 55.0% | |
| AACAGCACGGACGAAGGGAA+GGG | - | chr2_2:42480361-42480380 | None:intergenic | 55.0% | |
| AAACAGCACGGACGAAGGGA+AGG | - | chr2_2:42480362-42480381 | None:intergenic | 55.0% | |
| ! | TTCCCTTCGTCCGTGCTGTT+TGG | + | chr2_2:42480361-42480380 | Msa0251980:intron | 55.0% |
| GATAAGGGAGAGGCCATGCA+TGG | + | chr2_2:42480476-42480495 | Msa0251980:intron | 55.0% | |
| GCCATGCATGGTGAACAGTG+AGG | + | chr2_2:42480488-42480507 | Msa0251980:intron | 55.0% | |
| AGAGGGAGAGATGGGGGATG+GGG | - | chr2_2:42472887-42472906 | None:intergenic | 60.0% | |
| GAGAGGGAGAGATGGGGGAT+GGG | - | chr2_2:42472888-42472907 | None:intergenic | 60.0% | |
| TGAGAGGGAGAGATGGGGGA+TGG | - | chr2_2:42472889-42472908 | None:intergenic | 60.0% | |
| AGTGGAGCCACTGCCATAGG+TGG | - | chr2_2:42476137-42476156 | None:intergenic | 60.0% | |
| ACCTATGGCAGTGGCTCCAC+TGG | + | chr2_2:42476136-42476155 | Msa0251980:intron | 60.0% | |
| TCCAGTGGAGCCACTGCCAT+AGG | - | chr2_2:42476140-42476159 | None:intergenic | 60.0% | |
| GCGACCATATCTTTCCCGGG+TGG | + | chr2_2:42477848-42477867 | Msa0251980:CDS | 60.0% | |
| AGGGAGAACTAGGCCAGTCC+CGG | - | chr2_2:42480342-42480361 | None:intergenic | 60.0% | |
| AGCCCAATGAGGGCCGGGAC+TGG | + | chr2_2:42480326-42480345 | Msa0251980:intron | 70.0% | |
| GGCCAGTCCCGGCCCTCATT+GGG | - | chr2_2:42480331-42480350 | None:intergenic | 70.0% | |
| AGGCCAGTCCCGGCCCTCAT+TGG | - | chr2_2:42480332-42480351 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 42472873 | 42481125 | 42472873 | ID=Msa0251980;Name=Msa0251980 |
| chr2_2 | mRNA | 42472873 | 42481125 | 42472873 | ID=Msa0251980-mRNA-1;Parent=Msa0251980;Name=Msa0251980-mRNA-1;_AED=0.23;_eAED=0.23;_QI=57|0.45|0.41|0.58|0.90|0.91|12|0|423 |
| chr2_2 | exon | 42472873 | 42472928 | 42472873 | ID=Msa0251980-mRNA-1:exon:13241;Parent=Msa0251980-mRNA-1 |
| chr2_2 | exon | 42473636 | 42473813 | 42473636 | ID=Msa0251980-mRNA-1:exon:13242;Parent=Msa0251980-mRNA-1 |
| chr2_2 | exon | 42474206 | 42474256 | 42474206 | ID=Msa0251980-mRNA-1:exon:13243;Parent=Msa0251980-mRNA-1 |
| chr2_2 | exon | 42474422 | 42474552 | 42474422 | ID=Msa0251980-mRNA-1:exon:13244;Parent=Msa0251980-mRNA-1 |
| chr2_2 | exon | 42474997 | 42475113 | 42474997 | ID=Msa0251980-mRNA-1:exon:13245;Parent=Msa0251980-mRNA-1 |
| chr2_2 | exon | 42475236 | 42475355 | 42475236 | ID=Msa0251980-mRNA-1:exon:13246;Parent=Msa0251980-mRNA-1 |
| chr2_2 | exon | 42475921 | 42476012 | 42475921 | ID=Msa0251980-mRNA-1:exon:13247;Parent=Msa0251980-mRNA-1 |
| chr2_2 | exon | 42477706 | 42477878 | 42477706 | ID=Msa0251980-mRNA-1:exon:13248;Parent=Msa0251980-mRNA-1 |
| chr2_2 | exon | 42479013 | 42479066 | 42479013 | ID=Msa0251980-mRNA-1:exon:13249;Parent=Msa0251980-mRNA-1 |
| chr2_2 | exon | 42479409 | 42479518 | 42479409 | ID=Msa0251980-mRNA-1:exon:13250;Parent=Msa0251980-mRNA-1 |
| chr2_2 | exon | 42479922 | 42480035 | 42479922 | ID=Msa0251980-mRNA-1:exon:13251;Parent=Msa0251980-mRNA-1 |
| chr2_2 | exon | 42480993 | 42481125 | 42480993 | ID=Msa0251980-mRNA-1:exon:13252;Parent=Msa0251980-mRNA-1 |
| chr2_2 | five_prime_UTR | 42472873 | 42472928 | 42472873 | ID=Msa0251980-mRNA-1:five_prime_utr;Parent=Msa0251980-mRNA-1 |
| chr2_2 | five_prime_UTR | 42473636 | 42473636 | 42473636 | ID=Msa0251980-mRNA-1:five_prime_utr;Parent=Msa0251980-mRNA-1 |
| chr2_2 | CDS | 42473637 | 42473813 | 42473637 | ID=Msa0251980-mRNA-1:cds;Parent=Msa0251980-mRNA-1 |
| chr2_2 | CDS | 42474206 | 42474256 | 42474206 | ID=Msa0251980-mRNA-1:cds;Parent=Msa0251980-mRNA-1 |
| chr2_2 | CDS | 42474422 | 42474552 | 42474422 | ID=Msa0251980-mRNA-1:cds;Parent=Msa0251980-mRNA-1 |
| chr2_2 | CDS | 42474997 | 42475113 | 42474997 | ID=Msa0251980-mRNA-1:cds;Parent=Msa0251980-mRNA-1 |
| chr2_2 | CDS | 42475236 | 42475355 | 42475236 | ID=Msa0251980-mRNA-1:cds;Parent=Msa0251980-mRNA-1 |
| chr2_2 | CDS | 42475921 | 42476012 | 42475921 | ID=Msa0251980-mRNA-1:cds;Parent=Msa0251980-mRNA-1 |
| chr2_2 | CDS | 42477706 | 42477878 | 42477706 | ID=Msa0251980-mRNA-1:cds;Parent=Msa0251980-mRNA-1 |
| chr2_2 | CDS | 42479013 | 42479066 | 42479013 | ID=Msa0251980-mRNA-1:cds;Parent=Msa0251980-mRNA-1 |
| chr2_2 | CDS | 42479409 | 42479518 | 42479409 | ID=Msa0251980-mRNA-1:cds;Parent=Msa0251980-mRNA-1 |
| chr2_2 | CDS | 42479922 | 42480035 | 42479922 | ID=Msa0251980-mRNA-1:cds;Parent=Msa0251980-mRNA-1 |
| chr2_2 | CDS | 42480993 | 42481125 | 42480993 | ID=Msa0251980-mRNA-1:cds;Parent=Msa0251980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
