Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0329590 | XP_013464289.1 | 59.048 | 105 | 43 | 0 | 2 | 106 | 553 | 657 | 5.91e-27 | 124 |
Msa0329590 | XP_013464289.1 | 78.059 | 237 | 24 | 2 | 102 | 311 | 17 | 252 | 1.05e-116 | 372 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0329590 | sp|A0A1P8B554|THLP1_ARATH | 46.491 | 228 | 90 | 4 | 109 | 307 | 33 | 257 | 1.64e-61 | 200 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0212220 | Msa0329590 | 0.819093 | 1.391842e-52 | -8.615850e-47 |
Msa0329560 | Msa0329590 | 0.877711 | 5.046471e-69 | -8.615850e-47 |
Msa0329590 | Msa0754190 | 0.816162 | 6.373718e-52 | -8.615850e-47 |
Msa0329590 | Msa1009150 | 0.801539 | 8.585046e-49 | -8.615850e-47 |
Msa0329590 | Msa1098350 | 0.805102 | 1.569345e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0329590 | MtrunA17_Chr2g0311521 | 78.059 | 237 | 24 | 2 | 102 | 311 | 17 | 252 | 9.69e-121 | 372 |
Msa0329590 | MtrunA17_Chr2g0311521 | 59.048 | 105 | 43 | 0 | 2 | 106 | 553 | 657 | 5.44e-31 | 124 |
Msa0329590 | MtrunA17_Chr2g0311551 | 71.489 | 235 | 37 | 3 | 103 | 310 | 17 | 248 | 6.41e-110 | 343 |
Msa0329590 | MtrunA17_Chr2g0311551 | 54.286 | 105 | 48 | 0 | 2 | 106 | 550 | 654 | 3.02e-28 | 115 |
Msa0329590 | MtrunA17_Chr3g0142781 | 50.209 | 239 | 85 | 4 | 103 | 311 | 20 | 254 | 4.86e-74 | 231 |
Msa0329590 | MtrunA17_Chr2g0311561 | 49.789 | 237 | 89 | 2 | 108 | 317 | 10 | 243 | 2.01e-73 | 229 |
Msa0329590 | MtrunA17_Chr1g0156711 | 50.617 | 243 | 84 | 6 | 103 | 313 | 17 | 255 | 3.42e-73 | 229 |
Msa0329590 | MtrunA17_Chr8g0352471 | 48.085 | 235 | 90 | 4 | 103 | 309 | 20 | 250 | 5.87e-71 | 223 |
Msa0329590 | MtrunA17_Chr2g0311531 | 55.357 | 224 | 64 | 7 | 106 | 312 | 24 | 228 | 3.24e-70 | 219 |
Msa0329590 | MtrunA17_Chr8g0371781 | 47.699 | 239 | 86 | 4 | 103 | 307 | 22 | 255 | 1.74e-68 | 216 |
Msa0329590 | MtrunA17_Chr8g0357311 | 47.660 | 235 | 90 | 6 | 107 | 312 | 24 | 254 | 2.60e-66 | 209 |
Msa0329590 | MtrunA17_Chr5g0405581 | 44.958 | 238 | 95 | 4 | 102 | 307 | 19 | 252 | 6.69e-65 | 207 |
Msa0329590 | MtrunA17_Chr4g0037351 | 46.809 | 235 | 91 | 4 | 102 | 306 | 18 | 248 | 3.02e-64 | 206 |
Msa0329590 | MtrunA17_Chr5g0405611 | 43.750 | 272 | 108 | 8 | 78 | 313 | 53 | 315 | 1.44e-62 | 204 |
Msa0329590 | MtrunA17_Chr5g0428801 | 44.813 | 241 | 96 | 6 | 102 | 310 | 19 | 254 | 6.45e-62 | 200 |
Msa0329590 | MtrunA17_Chr4g0037331 | 48.230 | 226 | 87 | 6 | 104 | 305 | 20 | 239 | 1.87e-60 | 197 |
Msa0329590 | MtrunA17_Chr2g0312181 | 42.857 | 245 | 102 | 6 | 91 | 306 | 8 | 243 | 1.30e-59 | 192 |
Msa0329590 | MtrunA17_Chr8g0351851 | 45.570 | 237 | 89 | 8 | 102 | 305 | 8 | 237 | 1.78e-58 | 188 |
Msa0329590 | MtrunA17_Chr1g0154591 | 48.000 | 225 | 81 | 9 | 111 | 306 | 15 | 232 | 1.77e-57 | 186 |
Msa0329590 | MtrunA17_Chr7g0265011 | 39.841 | 251 | 110 | 7 | 91 | 306 | 43 | 287 | 3.35e-56 | 184 |
Msa0329590 | MtrunA17_Chr1g0179851 | 41.631 | 233 | 101 | 5 | 105 | 308 | 15 | 241 | 6.84e-54 | 177 |
Msa0329590 | MtrunA17_Chr1g0180161 | 40.000 | 245 | 110 | 6 | 102 | 317 | 15 | 251 | 1.05e-53 | 177 |
Msa0329590 | MtrunA17_Chr1g0180221 | 40.851 | 235 | 104 | 5 | 102 | 307 | 55 | 283 | 1.43e-53 | 177 |
Msa0329590 | MtrunA17_Chr1g0180121 | 41.026 | 234 | 103 | 5 | 102 | 306 | 15 | 242 | 1.89e-53 | 176 |
Msa0329590 | MtrunA17_Chr8g0371771 | 45.909 | 220 | 85 | 7 | 111 | 305 | 33 | 243 | 2.16e-53 | 177 |
Msa0329590 | MtrunA17_Chr3g0141341 | 44.105 | 229 | 92 | 8 | 111 | 310 | 14 | 235 | 2.31e-53 | 175 |
Msa0329590 | MtrunA17_Chr1g0180231 | 40.254 | 236 | 106 | 5 | 102 | 308 | 15 | 244 | 3.75e-52 | 172 |
Msa0329590 | MtrunA17_Chr1g0179871 | 40.254 | 236 | 106 | 5 | 102 | 308 | 15 | 244 | 3.75e-52 | 172 |
Msa0329590 | MtrunA17_Chr1g0179891 | 40.678 | 236 | 105 | 5 | 102 | 308 | 10 | 239 | 4.24e-52 | 172 |
Msa0329590 | MtrunA17_Chr8g0392961 | 43.891 | 221 | 87 | 7 | 115 | 306 | 33 | 245 | 7.04e-51 | 169 |
Msa0329590 | MtrunA17_Chr6g0482741 | 38.559 | 236 | 108 | 6 | 100 | 306 | 13 | 240 | 1.21e-49 | 166 |
Msa0329590 | MtrunA17_Chr7g0239131 | 38.793 | 232 | 108 | 6 | 103 | 306 | 17 | 242 | 5.51e-47 | 159 |
Msa0329590 | MtrunA17_Chr3g0112091 | 36.000 | 225 | 111 | 5 | 110 | 306 | 18 | 237 | 1.33e-45 | 155 |
Msa0329590 | MtrunA17_Chr2g0311501 | 40.000 | 205 | 88 | 6 | 154 | 328 | 2 | 201 | 1.39e-44 | 151 |
Msa0329590 | MtrunA17_Chr5g0424221 | 38.095 | 252 | 103 | 10 | 89 | 305 | 6 | 239 | 3.11e-44 | 153 |
Msa0329590 | MtrunA17_Chr6g0452331 | 37.118 | 229 | 110 | 5 | 108 | 306 | 28 | 252 | 2.24e-42 | 148 |
Msa0329590 | MtrunA17_Chr5g0406771 | 45.806 | 155 | 77 | 4 | 101 | 252 | 5 | 155 | 1.60e-38 | 135 |
Msa0329590 | MtrunA17_Chr5g0397821 | 37.387 | 222 | 97 | 8 | 108 | 306 | 23 | 225 | 9.87e-36 | 129 |
Msa0329590 | MtrunA17_Chr4g0031221 | 36.681 | 229 | 103 | 10 | 111 | 305 | 31 | 251 | 2.86e-35 | 129 |
Msa0329590 | MtrunA17_Chr8g0386341 | 38.272 | 243 | 105 | 12 | 90 | 306 | 25 | 248 | 8.86e-30 | 114 |
Msa0329590 | MtrunA17_Chr5g0397831 | 35.622 | 233 | 105 | 8 | 103 | 306 | 20 | 236 | 9.62e-30 | 114 |
Msa0329590 | MtrunA17_Chr2g0311541 | 57.426 | 101 | 41 | 1 | 2 | 100 | 311 | 411 | 8.37e-28 | 114 |
Msa0329590 | MtrunA17_Chr8g0386351 | 33.913 | 230 | 94 | 11 | 90 | 306 | 34 | 218 | 2.24e-25 | 101 |
Msa0329590 | MtrunA17_Chr2g0309611 | 27.753 | 227 | 128 | 7 | 106 | 304 | 31 | 249 | 3.03e-21 | 91.3 |
Msa0329590 | MtrunA17_Chr5g0399561 | 41.818 | 110 | 56 | 2 | 7 | 108 | 327 | 436 | 8.30e-18 | 84.7 |
Msa0329590 | MtrunA17_Chr5g0399591 | 39.091 | 110 | 59 | 2 | 7 | 108 | 326 | 435 | 3.23e-17 | 82.8 |
Msa0329590 | MtrunA17_Chr8g0338471 | 35.252 | 139 | 86 | 3 | 8 | 144 | 324 | 460 | 1.48e-15 | 77.8 |
Msa0329590 | MtrunA17_Chr1g0179911 | 28.163 | 245 | 126 | 10 | 101 | 311 | 15 | 243 | 2.12e-15 | 74.7 |
Msa0329590 | MtrunA17_Chr8g0338511 | 39.806 | 103 | 61 | 1 | 2 | 103 | 326 | 428 | 6.67e-15 | 75.5 |
Msa0329590 | MtrunA17_Chr1g0180181 | 38.710 | 93 | 50 | 3 | 233 | 320 | 21 | 111 | 1.05e-12 | 64.3 |
Msa0329590 | MtrunA17_Chr8g0338501 | 36.000 | 100 | 63 | 1 | 2 | 100 | 347 | 446 | 1.18e-12 | 68.9 |
Msa0329590 | MtrunA17_Chr8g0338481 | 36.458 | 96 | 60 | 1 | 6 | 100 | 108 | 203 | 1.55e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0329590 | AT1G20030.2 | 50.000 | 238 | 83 | 5 | 106 | 311 | 17 | 250 | 4.07e-71 | 224 |
Msa0329590 | AT1G75800.1 | 48.770 | 244 | 89 | 5 | 101 | 312 | 15 | 254 | 4.46e-71 | 224 |
Msa0329590 | AT1G20030.1 | 49.789 | 237 | 83 | 5 | 107 | 311 | 1 | 233 | 1.62e-70 | 222 |
Msa0329590 | AT2G17860.1 | 47.755 | 245 | 85 | 5 | 102 | 307 | 10 | 250 | 2.68e-69 | 217 |
Msa0329590 | AT4G36010.1 | 48.523 | 237 | 86 | 4 | 106 | 309 | 20 | 253 | 2.46e-66 | 211 |
Msa0329590 | AT4G36010.2 | 48.523 | 237 | 86 | 4 | 106 | 309 | 20 | 253 | 2.46e-66 | 211 |
Msa0329590 | AT4G24180.5 | 46.491 | 228 | 90 | 4 | 109 | 307 | 28 | 252 | 1.29e-62 | 200 |
Msa0329590 | AT4G24180.6 | 46.491 | 228 | 90 | 4 | 109 | 307 | 33 | 257 | 1.67e-62 | 200 |
Msa0329590 | AT4G38660.2 | 46.186 | 236 | 97 | 6 | 102 | 313 | 1 | 230 | 1.85e-62 | 202 |
Msa0329590 | AT4G24180.2 | 45.148 | 237 | 98 | 4 | 109 | 316 | 28 | 261 | 2.29e-62 | 201 |
Msa0329590 | AT4G24180.1 | 45.148 | 237 | 98 | 4 | 109 | 316 | 33 | 266 | 2.35e-62 | 201 |
Msa0329590 | AT4G38660.1 | 46.753 | 231 | 93 | 6 | 107 | 313 | 28 | 252 | 2.41e-61 | 200 |
Msa0329590 | AT4G38670.3 | 44.248 | 226 | 93 | 4 | 111 | 306 | 25 | 247 | 1.51e-58 | 191 |
Msa0329590 | AT4G38670.1 | 44.248 | 226 | 93 | 4 | 111 | 306 | 25 | 247 | 1.51e-58 | 191 |
Msa0329590 | AT4G38670.2 | 44.248 | 226 | 93 | 4 | 111 | 306 | 9 | 231 | 2.41e-58 | 189 |
Msa0329590 | AT1G75050.1 | 46.186 | 236 | 90 | 7 | 103 | 309 | 19 | 246 | 2.31e-56 | 184 |
Msa0329590 | AT5G38280.1 | 40.476 | 252 | 114 | 5 | 106 | 325 | 22 | 269 | 2.42e-55 | 191 |
Msa0329590 | AT5G38280.2 | 40.476 | 252 | 114 | 5 | 106 | 325 | 22 | 269 | 3.04e-55 | 191 |
Msa0329590 | AT1G75030.1 | 47.162 | 229 | 83 | 9 | 111 | 309 | 26 | 246 | 2.14e-54 | 179 |
Msa0329590 | AT1G75040.1 | 44.541 | 229 | 91 | 6 | 105 | 306 | 20 | 239 | 2.37e-54 | 178 |
Msa0329590 | AT4G24180.4 | 45.283 | 212 | 84 | 4 | 109 | 291 | 28 | 236 | 6.21e-54 | 180 |
Msa0329590 | AT4G24180.3 | 45.283 | 212 | 84 | 4 | 109 | 291 | 33 | 241 | 6.65e-54 | 180 |
Msa0329590 | AT5G24620.1 | 41.667 | 240 | 101 | 7 | 101 | 306 | 17 | 251 | 7.35e-53 | 180 |
Msa0329590 | AT1G19320.1 | 44.248 | 226 | 88 | 6 | 111 | 305 | 28 | 246 | 1.25e-52 | 174 |
Msa0329590 | AT5G24620.4 | 41.667 | 240 | 101 | 7 | 101 | 306 | 72 | 306 | 2.19e-52 | 180 |
Msa0329590 | AT5G24620.3 | 41.667 | 240 | 101 | 7 | 101 | 306 | 93 | 327 | 2.94e-52 | 180 |
Msa0329590 | AT1G73620.1 | 43.891 | 221 | 87 | 6 | 115 | 306 | 48 | 260 | 3.16e-52 | 174 |
Msa0329590 | AT1G18250.2 | 41.304 | 230 | 96 | 7 | 108 | 306 | 19 | 240 | 2.18e-49 | 166 |
Msa0329590 | AT1G18250.1 | 41.629 | 221 | 92 | 6 | 115 | 306 | 27 | 239 | 6.31e-49 | 164 |
Msa0329590 | AT1G77700.3 | 41.892 | 222 | 89 | 8 | 111 | 305 | 63 | 271 | 1.01e-45 | 159 |
Msa0329590 | AT1G77700.2 | 41.892 | 222 | 89 | 8 | 111 | 305 | 63 | 271 | 1.26e-45 | 158 |
Msa0329590 | AT1G77700.1 | 41.892 | 222 | 89 | 8 | 111 | 305 | 91 | 299 | 3.40e-45 | 158 |
Msa0329590 | AT5G02140.2 | 36.726 | 226 | 110 | 5 | 109 | 306 | 21 | 241 | 1.88e-43 | 150 |
Msa0329590 | AT5G02140.1 | 36.726 | 226 | 110 | 5 | 109 | 306 | 21 | 241 | 2.34e-43 | 151 |
Msa0329590 | AT1G70250.1 | 36.694 | 248 | 110 | 8 | 107 | 318 | 143 | 379 | 4.84e-41 | 153 |
Msa0329590 | AT4G11650.1 | 38.696 | 230 | 100 | 8 | 101 | 308 | 15 | 225 | 1.78e-37 | 135 |
Msa0329590 | AT2G28790.2 | 34.375 | 256 | 119 | 11 | 89 | 305 | 28 | 273 | 5.03e-37 | 134 |
Msa0329590 | AT2G28790.1 | 34.375 | 256 | 119 | 11 | 89 | 305 | 3 | 248 | 6.81e-37 | 133 |
Msa0329590 | AT5G40020.1 | 36.283 | 226 | 109 | 6 | 111 | 307 | 30 | 249 | 3.82e-36 | 131 |
Msa0329590 | AT4G18253.1 | 35.081 | 248 | 120 | 9 | 90 | 307 | 3 | 239 | 1.42e-34 | 127 |
Msa0329590 | AT4G18250.1 | 34.296 | 277 | 136 | 9 | 68 | 308 | 8 | 274 | 2.10e-34 | 134 |
Msa0329590 | AT4G36000.2 | 43.624 | 149 | 56 | 4 | 189 | 313 | 1 | 145 | 2.18e-33 | 123 |
Msa0329590 | AT4G36000.1 | 43.624 | 149 | 56 | 4 | 189 | 313 | 1 | 145 | 2.18e-33 | 123 |
Msa0329590 | AT5G24620.2 | 42.500 | 120 | 36 | 3 | 220 | 306 | 15 | 134 | 5.57e-22 | 94.7 |
Msa0329590 | AT2G24810.1 | 27.941 | 204 | 114 | 4 | 103 | 305 | 21 | 192 | 4.92e-13 | 67.4 |
Find 85 sgRNAs with CRISPR-Local
Find 413 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAAATGGACTGGTCATTTC+TGG | 0.137238 | 2_4:-43361123 | Msa0329590:CDS |
CAAAATTGTCCAACACTTAT+TGG | 0.139980 | 2_4:-43366196 | Msa0329590:CDS |
TGACAATTGACTTGGGAATT+TGG | 0.166714 | 2_4:+43366263 | None:intergenic |
ACACTTGGCTCACAAGTATT+TGG | 0.205169 | 2_4:+43360725 | None:intergenic |
TGTTGCGTTGGGAATCATTC+AGG | 0.295847 | 2_4:-43360749 | Msa0329590:CDS |
AGAAAAGATGTGCTAATAAA+AGG | 0.300712 | 2_4:-43366035 | Msa0329590:intron |
GACGATTCAAACAACATGTT+TGG | 0.310990 | 2_4:-43366296 | Msa0329590:CDS |
AGTTAACAATTGCAACTATA+CGG | 0.316482 | 2_4:-43361251 | Msa0329590:CDS |
CCTAGGTTGAAGTCTAAGTT+AGG | 0.325160 | 2_4:+43360110 | None:intergenic |
TTGTCAAGGATGGAAATATC+AGG | 0.346311 | 2_4:-43366246 | Msa0329590:CDS |
ACGATTCAAACAACATGTTT+GGG | 0.353465 | 2_4:-43366295 | Msa0329590:CDS |
ATTGTTCCGTTAGGTGGTTC+CGG | 0.360511 | 2_4:-43360902 | Msa0329590:CDS |
CGTGCTGTTACATGACTTAC+CGG | 0.371524 | 2_4:+43360883 | None:intergenic |
CCAATGTGTACTTCTCTAGA+AGG | 0.396890 | 2_4:-43366329 | Msa0329590:CDS |
GCCATCACATGCTACTTTGC+CGG | 0.403351 | 2_4:+43361033 | None:intergenic |
CCAGAAATGACCAGTCCATT+TGG | 0.411350 | 2_4:+43361123 | None:intergenic |
CAAATGGACTGGTCATTTCT+GGG | 0.415506 | 2_4:-43361122 | Msa0329590:CDS |
ATCTAACCTGGCGTTATTTG+AGG | 0.423240 | 2_4:+43360589 | None:intergenic |
ACAATTGCAACTATACGGTT+TGG | 0.427382 | 2_4:-43361246 | Msa0329590:CDS |
GACCAGCACGTTCACTTGTC+CGG | 0.442150 | 2_4:-43360642 | Msa0329590:CDS |
CAATTACAGCGCCTGCCAAA+TGG | 0.445223 | 2_4:-43361138 | Msa0329590:CDS |
GGGGATTGTGATCTGTTGTA+AGG | 0.460682 | 2_4:+43360057 | None:intergenic |
CTGTAATTGTTGAATTCTCA+CGG | 0.465536 | 2_4:+43361152 | None:intergenic |
CGGATCACCGCCTTTGACAC+TGG | 0.471134 | 2_4:-43361005 | Msa0329590:CDS |
TCCATCCTTGACAATTGACT+TGG | 0.474330 | 2_4:+43366255 | None:intergenic |
AATGTTGCGTAATCAGATTT+AGG | 0.482764 | 2_4:+43366173 | None:intergenic |
GTCACGGGTGACTGTGGATC+CGG | 0.488422 | 2_4:-43361052 | Msa0329590:CDS |
CCGATGGAAATTGTTCCGTT+AGG | 0.488627 | 2_4:-43360911 | Msa0329590:CDS |
ATCATCATACGCATAGCTAT+AGG | 0.489323 | 2_4:+43360667 | None:intergenic |
TGAGATGGGATCTCAGATCT+AGG | 0.489567 | 2_4:+43360083 | None:intergenic |
CATACTACTAGTGGAAATAG+TGG | 0.491376 | 2_4:-43361214 | Msa0329590:CDS |
ACGCATAGCTATAGGCTTGA+GGG | 0.502843 | 2_4:+43360675 | None:intergenic |
GCAAGATTGCTTCTGTGTGT+TGG | 0.507183 | 2_4:-43366111 | Msa0329590:CDS |
GACACTGGCGAAAATCTCTC+TGG | 0.510712 | 2_4:-43360990 | Msa0329590:CDS |
TGTAATTGTTGAATTCTCAC+GGG | 0.515013 | 2_4:+43361153 | None:intergenic |
CCCAAGTCAATTGTCAAGGA+TGG | 0.516745 | 2_4:-43366256 | Msa0329590:CDS |
ATGGAAATTGTTCCGTTAGG+TGG | 0.518636 | 2_4:-43360908 | Msa0329590:CDS |
GTCCTACCTCAAATAACGCC+AGG | 0.524417 | 2_4:-43360595 | Msa0329590:intron |
CCATCCTTGACAATTGACTT+GGG | 0.530549 | 2_4:+43366256 | None:intergenic |
AGATTTAGGCCAATAAGTGT+TGG | 0.531026 | 2_4:+43366187 | None:intergenic |
CCACTAGTAGTATGTGAAGC+TGG | 0.536657 | 2_4:+43361223 | None:intergenic |
AAATGACCAGTCCATTTGGC+AGG | 0.537182 | 2_4:+43361127 | None:intergenic |
TCTCAGATCTAGGAGTTCCT+AGG | 0.542825 | 2_4:+43360093 | None:intergenic |
TCCTGTGTCACGGGTGACTG+TGG | 0.545452 | 2_4:-43361058 | Msa0329590:CDS |
TTGCATTCTTCTAGACTACA+AGG | 0.549493 | 2_4:+43366146 | None:intergenic |
ACAGCGCCTGCCAAATGGAC+TGG | 0.564539 | 2_4:-43361133 | Msa0329590:CDS |
CTAGGTTGAAGTCTAAGTTA+GGG | 0.564715 | 2_4:+43360111 | None:intergenic |
CCTAACTTAGACTTCAACCT+AGG | 0.564997 | 2_4:-43360110 | Msa0329590:CDS |
CCAGCTTCACATACTACTAG+TGG | 0.566702 | 2_4:-43361223 | Msa0329590:CDS |
AAAATGCTACCACTCTCACA+TGG | 0.568941 | 2_4:-43366059 | Msa0329590:CDS |
TACGCATAGCTATAGGCTTG+AGG | 0.579746 | 2_4:+43360674 | None:intergenic |
GGGATTGTGATCTGTTGTAA+GGG | 0.586400 | 2_4:+43360058 | None:intergenic |
GGACTGGTCATTTCTGGGGA+CGG | 0.586901 | 2_4:-43361117 | Msa0329590:CDS |
CTGTTGTAAGGGAGTGAGAT+GGG | 0.587980 | 2_4:+43360069 | None:intergenic |
TATGATGTCAGCTTAGTAGA+CGG | 0.592433 | 2_4:-43360944 | Msa0329590:CDS |
TCCACAGTCACCCGTGACAC+AGG | 0.592636 | 2_4:+43361057 | None:intergenic |
CGATTCAAACAACATGTTTG+GGG | 0.598708 | 2_4:-43366294 | Msa0329590:CDS |
CTAACGGAACAATTTCCATC+GGG | 0.598873 | 2_4:+43360912 | None:intergenic |
ACAACGTGATAATCGGTGGC+CGG | 0.599855 | 2_4:+43360623 | None:intergenic |
CCTAACGGAACAATTTCCAT+CGG | 0.605818 | 2_4:+43360911 | None:intergenic |
TGTCAAGGATGGAAATATCA+GGG | 0.608271 | 2_4:-43366245 | Msa0329590:CDS |
GGCCGGACAAGTGAACGTGC+TGG | 0.609375 | 2_4:+43360640 | None:intergenic |
CGGTAAGTCATGTAACAGCA+CGG | 0.610003 | 2_4:-43360882 | Msa0329590:CDS |
TTGTAGTCTAGAAGAATGCA+AGG | 0.610943 | 2_4:-43366144 | Msa0329590:CDS |
TCCGGCAAAGTAGCATGTGA+TGG | 0.612293 | 2_4:-43361034 | Msa0329590:CDS |
GGTAAGTCATGTAACAGCAC+GGG | 0.618640 | 2_4:-43360881 | Msa0329590:CDS |
AATATCTTAGCATACACACT+TGG | 0.620283 | 2_4:+43360710 | None:intergenic |
AATTCCCAAGTCAATTGTCA+AGG | 0.623908 | 2_4:-43366260 | Msa0329590:CDS |
GACTTACCGGAACCACCTAA+CGG | 0.626338 | 2_4:+43360896 | None:intergenic |
TCTGTTGTAAGGGAGTGAGA+TGG | 0.629255 | 2_4:+43360068 | None:intergenic |
GTTGAAGTCTAAGTTAGGGT+AGG | 0.636132 | 2_4:+43360115 | None:intergenic |
CCTTCTAGAGAAGTACACAT+TGG | 0.643294 | 2_4:+43366329 | None:intergenic |
AATGCAACATTAGCAACCAC+CGG | 0.645956 | 2_4:-43361190 | Msa0329590:CDS |
AAATGGACTGGTCATTTCTG+GGG | 0.649772 | 2_4:-43361121 | Msa0329590:CDS |
GATTCAAACAACATGTTTGG+GGG | 0.662586 | 2_4:-43366293 | Msa0329590:CDS |
TCAAAGGCGGTGATCCGCTG+CGG | 0.664709 | 2_4:+43361011 | None:intergenic |
GTAATTGTTGAATTCTCACG+GGG | 0.675678 | 2_4:+43361154 | None:intergenic |
AAATGCTACCACTCTCACAT+GGG | 0.679172 | 2_4:-43366058 | Msa0329590:CDS |
GTAGCATGTGATGGCCGCAG+CGG | 0.682961 | 2_4:-43361025 | Msa0329590:CDS |
AGACGGTTATAATGTCCCGA+TGG | 0.683696 | 2_4:-43360927 | Msa0329590:CDS |
AACCTGGCGTTATTTGAGGT+AGG | 0.693496 | 2_4:+43360593 | None:intergenic |
CATACCGCGTTCAAATCTGT+AGG | 0.700053 | 2_4:+43360854 | None:intergenic |
TCTGTAATTTGGGAATCACA+GGG | 0.710933 | 2_4:+43360037 | None:intergenic |
CTGTAATTTGGGAATCACAG+GGG | 0.711457 | 2_4:+43360038 | None:intergenic |
TTGTCCTACAGATTTGAACG+CGG | 0.778811 | 2_4:-43360858 | Msa0329590:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAAAAAAAAAAATATAAT+TGG | + | chr2_4:43362127-43362146 | None:intergenic | 0.0% |
!!! | TATTTTCTTCAAAAAAAAAA+AGG | + | chr2_4:43360656-43360675 | None:intergenic | 10.0% |
!! | TATAGTTAAAATAAAAGTTA+TGG | + | chr2_4:43361401-43361420 | None:intergenic | 10.0% |
!! | AAAAAGATGTATAATAAATA+GGG | - | chr2_4:43361933-43361952 | Msa0329590:intron | 10.0% |
!!! | AAAAGGTATTTATTTAAAAA+TGG | - | chr2_4:43362165-43362184 | Msa0329590:intron | 10.0% |
!!! | AAAGGTATTTATTTAAAAAT+GGG | - | chr2_4:43362166-43362185 | Msa0329590:intron | 10.0% |
!! | TAAATTTATATTAAAACTGT+GGG | + | chr2_4:43362367-43362386 | None:intergenic | 10.0% |
!! | TTAAATTTATATTAAAACTG+TGG | + | chr2_4:43362368-43362387 | None:intergenic | 10.0% |
!! | AAAAAAATGATTTAAAAATG+GGG | + | chr2_4:43363252-43363271 | None:intergenic | 10.0% |
!!! | TCTAATTACTTAATTTTAAT+AGG | - | chr2_4:43363951-43363970 | Msa0329590:intron | 10.0% |
!!! | TAAAAAATCTCAATTTTATA+AGG | - | chr2_4:43364466-43364485 | Msa0329590:intron | 10.0% |
!! | TATTAACACAAAAAAATAAA+GGG | + | chr2_4:43364509-43364528 | None:intergenic | 10.0% |
!! | ATATTAACACAAAAAAATAA+AGG | + | chr2_4:43364510-43364529 | None:intergenic | 10.0% |
!!! | TATTTTTTTGTGTTAATATT+TGG | - | chr2_4:43364511-43364530 | Msa0329590:intron | 10.0% |
!! | CGTAACAAAATTAATAAATA+AGG | + | chr2_4:43360512-43360531 | None:intergenic | 15.0% |
!! | GAAAAAGATGTATAATAAAT+AGG | - | chr2_4:43361932-43361951 | Msa0329590:intron | 15.0% |
!! | AAAAGATGTATAATAAATAG+GGG | - | chr2_4:43361934-43361953 | Msa0329590:intron | 15.0% |
!! | AAAGAAATAATTAATGTAGT+TGG | - | chr2_4:43361966-43361985 | Msa0329590:intron | 15.0% |
!! | TTTAATAAAAACTTACTCTT+TGG | - | chr2_4:43362277-43362296 | Msa0329590:intron | 15.0% |
!! | ATTTAATCAATATTGTAAAG+TGG | + | chr2_4:43363002-43363021 | None:intergenic | 15.0% |
!! | AAAAAATGATTTAAAAATGG+GGG | + | chr2_4:43363251-43363270 | None:intergenic | 15.0% |
!! | ATCCATTTATTAAAAAGTAA+CGG | - | chr2_4:43363272-43363291 | Msa0329590:intron | 15.0% |
!!! | TTGATAGTCATAAAAAAAAA+AGG | - | chr2_4:43363461-43363480 | Msa0329590:intron | 15.0% |
!! | ATAAAATGTACATTAAAATC+TGG | + | chr2_4:43363544-43363563 | None:intergenic | 15.0% |
!! | CTTAGAAAAAAAAAAAAGAT+TGG | + | chr2_4:43363590-43363609 | None:intergenic | 15.0% |
!!! | GTTAACATTAAATATGTTTT+TGG | - | chr2_4:43363908-43363927 | Msa0329590:intron | 15.0% |
!!! | GAAGTAATTTTTTTTTTGTA+GGG | + | chr2_4:43363986-43364005 | None:intergenic | 15.0% |
!!! | AGAAGTAATTTTTTTTTTGT+AGG | + | chr2_4:43363987-43364006 | None:intergenic | 15.0% |
!! | AAAAAGAAAAACAATTATTG+TGG | - | chr2_4:43364654-43364673 | Msa0329590:intron | 15.0% |
!!! | TTTTCTTTTGTGATATAAAA+GGG | + | chr2_4:43364765-43364784 | None:intergenic | 15.0% |
!!! | ATTTTCTTTTGTGATATAAA+AGG | + | chr2_4:43364766-43364785 | None:intergenic | 15.0% |
!! | TTATATCACAAAAGAAAATT+TGG | - | chr2_4:43364767-43364786 | Msa0329590:intron | 15.0% |
!! | AGTTGAAAATAACAAAAAAT+GGG | - | chr2_4:43365555-43365574 | Msa0329590:intron | 15.0% |
!!! | ATTGTGATATCAATTCTTTT+GGG | - | chr2_4:43360475-43360494 | Msa0329590:intron | 20.0% |
!!! | TTTTTTAGATGGAATTTGTT+AGG | + | chr2_4:43360598-43360617 | None:intergenic | 20.0% |
!! | ACGTGTTAAAGATTATTTAT+TGG | - | chr2_4:43360699-43360718 | Msa0329590:CDS | 20.0% |
!!! | TTTTTTTTTTGATCTTCATG+CGG | + | chr2_4:43360821-43360840 | None:intergenic | 20.0% |
!! | AACTTTAAACTTGTGTTATA+CGG | + | chr2_4:43360925-43360944 | None:intergenic | 20.0% |
!! | CATTAAATAAATGATGTATG+TGG | + | chr2_4:43361735-43361754 | None:intergenic | 20.0% |
!! | GACAAAAAAAATTCTCAAAA+GGG | - | chr2_4:43362016-43362035 | Msa0329590:intron | 20.0% |
!! | TATATATATCATTGAAATGC+CGG | - | chr2_4:43362098-43362117 | Msa0329590:intron | 20.0% |
!!! | AAAAAAATATAATTGGTGAC+CGG | + | chr2_4:43362120-43362139 | None:intergenic | 20.0% |
!!! | TCATGTCATTTTAACAAATA+TGG | - | chr2_4:43362394-43362413 | Msa0329590:intron | 20.0% |
!!! | TCATATTCTTTTTCATGTAA+TGG | - | chr2_4:43362620-43362639 | Msa0329590:intron | 20.0% |
!!! | TCATATTCTTTTTCATGTAA+TGG | - | chr2_4:43362620-43362639 | Msa0329590:intron | 20.0% |
!!! | CACATTTTTTTAAAAGAGAA+TGG | + | chr2_4:43363103-43363122 | None:intergenic | 20.0% |
!!! | CATTCTCTTTTAAAAAAATG+TGG | - | chr2_4:43363101-43363120 | Msa0329590:intron | 20.0% |
!!! | GAAAGTCTAAATTTTAAGAT+TGG | + | chr2_4:43363623-43363642 | None:intergenic | 20.0% |
!!! | GCATTTTATTTTTAGGTTAA+GGG | - | chr2_4:43363719-43363738 | Msa0329590:intron | 20.0% |
!!! | TAGAAGTATCCAATTTTATA+TGG | + | chr2_4:43363935-43363954 | None:intergenic | 20.0% |
!! | AAGATAAAAGTAACAAAATC+TGG | - | chr2_4:43364178-43364197 | Msa0329590:intron | 20.0% |
!!! | TAAACAAATTTGATTTGAGT+AGG | - | chr2_4:43364308-43364327 | Msa0329590:intron | 20.0% |
!!! | AAACAAATTTGATTTGAGTA+GGG | - | chr2_4:43364309-43364328 | Msa0329590:intron | 20.0% |
!! | TAAGTACTAATATACTTTCT+AGG | - | chr2_4:43364386-43364405 | Msa0329590:intron | 20.0% |
!! | AAGTACTAATATACTTTCTA+GGG | - | chr2_4:43364387-43364406 | Msa0329590:intron | 20.0% |
!! | TCCTTTGTTAAAAAAAAGAA+AGG | - | chr2_4:43364431-43364450 | Msa0329590:intron | 20.0% |
!!! | TCCTTTCTTTTTTTTAACAA+AGG | + | chr2_4:43364435-43364454 | None:intergenic | 20.0% |
!!! | ATATTTGGTTTTTAAGAGAA+AGG | - | chr2_4:43364526-43364545 | Msa0329590:intron | 20.0% |
!! | GAGTTGAAAATAACAAAAAA+TGG | - | chr2_4:43365554-43365573 | Msa0329590:intron | 20.0% |
!! | TTTTCAATGAAAGTTCTTGT+TGG | - | chr2_4:43360293-43360312 | Msa0329590:intron | 25.0% |
! | AGAAAAGATGTGCTAATAAA+AGG | - | chr2_4:43360343-43360362 | Msa0329590:intron | 25.0% |
! | ATCATGATCTTCATTCAAAT+TGG | + | chr2_4:43360416-43360435 | None:intergenic | 25.0% |
! | TCATGATAATAAAACCACAA+AGG | - | chr2_4:43360429-43360448 | Msa0329590:intron | 25.0% |
! | AATAAAACCACAAAGGAAAA+AGG | - | chr2_4:43360436-43360455 | Msa0329590:intron | 25.0% |
!! | CATTGTGATATCAATTCTTT+TGG | - | chr2_4:43360474-43360493 | Msa0329590:intron | 25.0% |
!!! | CAACTTAACCTAATTTTTTC+CGG | - | chr2_4:43360539-43360558 | Msa0329590:intron | 25.0% |
! | TTCAAAAAAAAAAAGGCAAG+CGG | + | chr2_4:43360649-43360668 | None:intergenic | 25.0% |
! | AACACGTAATATCATTGATA+TGG | + | chr2_4:43360686-43360705 | None:intergenic | 25.0% |
!!! | AGTGGTTATAATTTTAGCAA+TGG | - | chr2_4:43360770-43360789 | Msa0329590:intron | 25.0% |
!!! | AGTTTAAAGTTTTTCTCACA+CGG | - | chr2_4:43360934-43360953 | Msa0329590:CDS | 25.0% |
! | TAATCAAAGTCACATGAATT+GGG | + | chr2_4:43361055-43361074 | None:intergenic | 25.0% |
! | TTAATCAAAGTCACATGAAT+TGG | + | chr2_4:43361056-43361075 | None:intergenic | 25.0% |
! | AATAAGAAGTGAGAAAAACA+AGG | + | chr2_4:43361159-43361178 | None:intergenic | 25.0% |
!!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr2_4:43361158-43361177 | Msa0329590:CDS | 25.0% |
! | TTCTTATTGGTCAAAAACAA+TGG | - | chr2_4:43361171-43361190 | Msa0329590:CDS | 25.0% |
! | CAAAATATCATTTCTCTTTG+TGG | - | chr2_4:43361273-43361292 | Msa0329590:CDS | 25.0% |
! | TTTACACTAAACATGTAGAA+CGG | + | chr2_4:43361478-43361497 | None:intergenic | 25.0% |
! | ATGTATGTGGTCTATATTAA+TGG | + | chr2_4:43361722-43361741 | None:intergenic | 25.0% |
!!! | TTCCCGTTATTTTTTCAAAA+GGG | + | chr2_4:43361795-43361814 | None:intergenic | 25.0% |
!!! | ATTCCCGTTATTTTTTCAAA+AGG | + | chr2_4:43361796-43361815 | None:intergenic | 25.0% |
! | GGACAAAAAAAATTCTCAAA+AGG | - | chr2_4:43362015-43362034 | Msa0329590:intron | 25.0% |
!! | TCAAAAGGGTCTTATAATTA+GGG | - | chr2_4:43362030-43362049 | Msa0329590:intron | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+CGG | - | chr2_4:43362067-43362086 | Msa0329590:intron | 25.0% |
!!! | TAAAAATGGGTCTTGTTAAT+CGG | - | chr2_4:43362179-43362198 | Msa0329590:intron | 25.0% |
! | ATGCAAAAGGAAAAATGAAA+AGG | + | chr2_4:43362495-43362514 | None:intergenic | 25.0% |
! | ATTCGCTAAGAAAAATGAAA+AGG | + | chr2_4:43362521-43362540 | None:intergenic | 25.0% |
! | ATGCAAAAGGAAAAATGAAA+AGG | + | chr2_4:43362495-43362514 | None:intergenic | 25.0% |
! | ATTCGCTAAGAAAAATGAAA+AGG | + | chr2_4:43362521-43362540 | None:intergenic | 25.0% |
! | ATGCAAAAGGAAAAATGAAA+AGG | + | chr2_4:43362495-43362514 | None:intergenic | 25.0% |
! | ATTCGCTAAGAAAAATGAAA+AGG | + | chr2_4:43362521-43362540 | None:intergenic | 25.0% |
! | ATGCAAAAGGAAAAATGAAA+AGG | + | chr2_4:43362495-43362514 | None:intergenic | 25.0% |
! | ATTCGCTAAGAAAAATGAAA+AGG | + | chr2_4:43362521-43362540 | None:intergenic | 25.0% |
! | ATTCGCTAAGAAAAATGAAA+AGG | + | chr2_4:43362521-43362540 | None:intergenic | 25.0% |
! | AATATTGTAAAGTGGTATGT+TGG | + | chr2_4:43362994-43363013 | None:intergenic | 25.0% |
!!! | CACCGTTACTTTTTAATAAA+TGG | + | chr2_4:43363277-43363296 | None:intergenic | 25.0% |
!!! | TACTGTGGCATTTTATTTTT+AGG | - | chr2_4:43363712-43363731 | Msa0329590:intron | 25.0% |
!!! | GGCATTTTATTTTTAGGTTA+AGG | - | chr2_4:43363718-43363737 | Msa0329590:intron | 25.0% |
!! | ACTTGTTGAGGAATTATAAA+AGG | + | chr2_4:43363873-43363892 | None:intergenic | 25.0% |
!!! | GTTTTTGGTCCATATAAAAT+TGG | - | chr2_4:43363923-43363942 | Msa0329590:intron | 25.0% |
!!! | TTTTTTGCAGAGAAACTTTT+AGG | - | chr2_4:43364226-43364245 | Msa0329590:intron | 25.0% |
! | AGTACTAATATACTTTCTAG+GGG | - | chr2_4:43364388-43364407 | Msa0329590:intron | 25.0% |
! | AAGAAGAACAAAAATGACAT+TGG | + | chr2_4:43364954-43364973 | None:intergenic | 25.0% |
!!! | TCTTTTTTTCTATTTTGCAG+TGG | - | chr2_4:43365082-43365101 | Msa0329590:intron | 25.0% |
! | AGTTAACAATTGCAACTATA+CGG | - | chr2_4:43365127-43365146 | Msa0329590:intron | 25.0% |
! | GAAAATAACAAAAAATGGGA+CGG | - | chr2_4:43365559-43365578 | Msa0329590:intron | 25.0% |
! | ACAAAAAACAACGTGATAAT+CGG | + | chr2_4:43365765-43365784 | None:intergenic | 25.0% |
! | ATTAGTATTAGTATCTAACC+TGG | + | chr2_4:43365804-43365823 | None:intergenic | 25.0% |
! | ATAGATAAGTTAACCAAAAG+CGG | + | chr2_4:43365938-43365957 | None:intergenic | 25.0% |
ACGATTCAAACAACATGTTT+GGG | - | chr2_4:43360083-43360102 | Msa0329590:CDS | 30.0% | |
CAAAATTGTCCAACACTTAT+TGG | - | chr2_4:43360182-43360201 | Msa0329590:intron | 30.0% | |
AATGTTGCGTAATCAGATTT+AGG | + | chr2_4:43360208-43360227 | None:intergenic | 30.0% | |
!!! | GTGCAATGCATTTTTTTAGA+TGG | + | chr2_4:43360609-43360628 | None:intergenic | 30.0% |
TATCTAGGTTAACACAATCA+AGG | - | chr2_4:43361008-43361027 | Msa0329590:CDS | 30.0% | |
ATCTAGGTTAACACAATCAA+GGG | - | chr2_4:43361009-43361028 | Msa0329590:CDS | 30.0% | |
AATCAAGGGGCAAATTATTT+AGG | - | chr2_4:43361023-43361042 | Msa0329590:CDS | 30.0% | |
!! | AAAATTCCATATTGACTCGT+AGG | + | chr2_4:43361084-43361103 | None:intergenic | 30.0% |
TCAACAATGTTGTCATCAAA+TGG | + | chr2_4:43361133-43361152 | None:intergenic | 30.0% | |
AGAGAGAAAAATGAAGAAAG+AGG | - | chr2_4:43361194-43361213 | Msa0329590:CDS | 30.0% | |
! | TCTTTCAATCACAATTTTCG+TGG | - | chr2_4:43361303-43361322 | Msa0329590:intron | 30.0% |
TACTCTCTCAAAGAATTAGT+TGG | + | chr2_4:43361363-43361382 | None:intergenic | 30.0% | |
!! | TTGGTGTCAGGAAATATAAT+TGG | + | chr2_4:43361589-43361608 | None:intergenic | 30.0% |
TGTTTATAATAGTGACCAGA+GGG | + | chr2_4:43361657-43361676 | None:intergenic | 30.0% | |
TTGTTTATAATAGTGACCAG+AGG | + | chr2_4:43361658-43361677 | None:intergenic | 30.0% | |
!! | GGACCCTTTTGAAAAAATAA+CGG | - | chr2_4:43361789-43361808 | Msa0329590:intron | 30.0% |
!! | GACCCTTTTGAAAAAATAAC+GGG | - | chr2_4:43361790-43361809 | Msa0329590:intron | 30.0% |
! | AATAACGGGAATTAAGATAG+TGG | - | chr2_4:43361804-43361823 | Msa0329590:intron | 30.0% |
AATGTAGTTGGAAATAGCAA+AGG | - | chr2_4:43361978-43361997 | Msa0329590:intron | 30.0% | |
ATGTAGTTGGAAATAGCAAA+GGG | - | chr2_4:43361979-43361998 | Msa0329590:intron | 30.0% | |
! | CTCAAAAGGGTCTTATAATT+AGG | - | chr2_4:43362029-43362048 | Msa0329590:intron | 30.0% |
TGATATATATATACTCCCTC+CGG | + | chr2_4:43362089-43362108 | None:intergenic | 30.0% | |
TTATATTAAAACTGTGGGTG+CGG | + | chr2_4:43362362-43362381 | None:intergenic | 30.0% | |
ATTATCTCCCAATCATGTAA+TGG | - | chr2_4:43362435-43362454 | Msa0329590:intron | 30.0% | |
!! | TCTTTTTCATGTAATGGTTG+TGG | - | chr2_4:43362626-43362645 | Msa0329590:intron | 30.0% |
!! | CTTTTTCATGTAATGGTTGT+GGG | - | chr2_4:43362627-43362646 | Msa0329590:intron | 30.0% |
!! | CTCCTTTTCATTTTTCCTTT+GGG | - | chr2_4:43362490-43362509 | Msa0329590:intron | 30.0% |
AACCCAAAGGAAAAATGAAA+AGG | + | chr2_4:43362676-43362695 | None:intergenic | 30.0% | |
!! | TCTTTTTCATGTAATGGTTG+TGG | - | chr2_4:43362626-43362645 | Msa0329590:intron | 30.0% |
!! | CTTTTTCATGTAATGGTTGT+GGG | - | chr2_4:43362627-43362646 | Msa0329590:intron | 30.0% |
ACAATTGCTTGATTGTAAGA+GGG | + | chr2_4:43362970-43362989 | None:intergenic | 30.0% | |
TACAATTGCTTGATTGTAAG+AGG | + | chr2_4:43362971-43362990 | None:intergenic | 30.0% | |
! | GATGATAGTGAAAAATGAGA+TGG | - | chr2_4:43363367-43363386 | Msa0329590:intron | 30.0% |
!! | TCATTTTAACGTCATTCTTC+CGG | + | chr2_4:43363406-43363425 | None:intergenic | 30.0% |
GAAACAAAGTAGATTGTCTT+TGG | + | chr2_4:43363679-43363698 | None:intergenic | 30.0% | |
TCAAGACATAACAATTACTG+TGG | - | chr2_4:43363697-43363716 | Msa0329590:intron | 30.0% | |
TTTGTTAACTAATATCCCAG+GGG | + | chr2_4:43363759-43363778 | None:intergenic | 30.0% | |
! | GTTTGTTAACTAATATCCCA+GGG | + | chr2_4:43363760-43363779 | None:intergenic | 30.0% |
!! | AGTTTGTTAACTAATATCCC+AGG | + | chr2_4:43363761-43363780 | None:intergenic | 30.0% |
! | CAAGTTTAGAACACTATGAA+AGG | - | chr2_4:43364082-43364101 | Msa0329590:intron | 30.0% |
CTGAGTGCAAAACAAAATTA+AGG | - | chr2_4:43364339-43364358 | Msa0329590:intron | 30.0% | |
GTACTAATATACTTTCTAGG+GGG | - | chr2_4:43364389-43364408 | Msa0329590:intron | 30.0% | |
ACCAATAATATGAAGTTCAG+CGG | - | chr2_4:43364552-43364571 | Msa0329590:intron | 30.0% | |
CTTCATCTATCAATAACTTC+AGG | - | chr2_4:43364978-43364997 | Msa0329590:intron | 30.0% | |
TGTAATTGTTGAATTCTCAC+GGG | + | chr2_4:43365228-43365247 | None:intergenic | 30.0% | |
CTGTAATTGTTGAATTCTCA+CGG | + | chr2_4:43365229-43365248 | None:intergenic | 30.0% | |
!!! | TTTGTTATTTTCAACTCCGT+TGG | + | chr2_4:43365551-43365570 | None:intergenic | 30.0% |
AATATCTTAGCATACACACT+TGG | + | chr2_4:43365671-43365690 | None:intergenic | 30.0% | |
AACAAGAAACAGTTTGCAAA+TGG | + | chr2_4:43365877-43365896 | None:intergenic | 30.0% | |
! | TGCAAACTGTTTCTTGTTAT+CGG | - | chr2_4:43365879-43365898 | Msa0329590:intron | 30.0% |
TAGATAAGTTAACCAAAAGC+GGG | + | chr2_4:43365937-43365956 | None:intergenic | 30.0% | |
GCTATACAAATCTGTTATTC+TGG | - | chr2_4:43365971-43365990 | Msa0329590:intron | 30.0% | |
GAGAAATTGTTAACCAAGTT+CGG | - | chr2_4:43366134-43366153 | Msa0329590:CDS | 30.0% | |
GACGATTCAAACAACATGTT+TGG | - | chr2_4:43360082-43360101 | Msa0329590:CDS | 35.0% | |
CGATTCAAACAACATGTTTG+GGG | - | chr2_4:43360084-43360103 | Msa0329590:CDS | 35.0% | |
GATTCAAACAACATGTTTGG+GGG | - | chr2_4:43360085-43360104 | Msa0329590:CDS | 35.0% | |
!! | TGACAATTGACTTGGGAATT+TGG | + | chr2_4:43360118-43360137 | None:intergenic | 35.0% |
AATTCCCAAGTCAATTGTCA+AGG | - | chr2_4:43360118-43360137 | Msa0329590:CDS | 35.0% | |
TTGTCAAGGATGGAAATATC+AGG | - | chr2_4:43360132-43360151 | Msa0329590:intron | 35.0% | |
TGTCAAGGATGGAAATATCA+GGG | - | chr2_4:43360133-43360152 | Msa0329590:intron | 35.0% | |
AGATTTAGGCCAATAAGTGT+TGG | + | chr2_4:43360194-43360213 | None:intergenic | 35.0% | |
TTGCATTCTTCTAGACTACA+AGG | + | chr2_4:43360235-43360254 | None:intergenic | 35.0% | |
TTGTAGTCTAGAAGAATGCA+AGG | - | chr2_4:43360234-43360253 | Msa0329590:intron | 35.0% | |
! | ATCATGACCTTTTTCCTTTG+TGG | + | chr2_4:43360446-43360465 | None:intergenic | 35.0% |
CAAATGAGCCGGAAAAAATT+AGG | + | chr2_4:43360550-43360569 | None:intergenic | 35.0% | |
ACCTAATAAAGCAAATGAGC+CGG | + | chr2_4:43360561-43360580 | None:intergenic | 35.0% | |
! | ATGGTTTGTGCAATTTGCTT+TGG | - | chr2_4:43360789-43360808 | Msa0329590:intron | 35.0% |
ACTTGTGTTATACGGACAAA+GGG | + | chr2_4:43360917-43360936 | None:intergenic | 35.0% | |
AACTTGTGTTATACGGACAA+AGG | + | chr2_4:43360918-43360937 | None:intergenic | 35.0% | |
ACGTTCTAATCCATGGAAAA+AGG | - | chr2_4:43360974-43360993 | Msa0329590:CDS | 35.0% | |
CGTTCTAATCCATGGAAAAA+GGG | - | chr2_4:43360975-43360994 | Msa0329590:CDS | 35.0% | |
GTTCTAATCCATGGAAAAAG+GGG | - | chr2_4:43360976-43360995 | Msa0329590:CDS | 35.0% | |
TCTAGGTTAACACAATCAAG+GGG | - | chr2_4:43361010-43361029 | Msa0329590:CDS | 35.0% | |
! | CGAGTCAATATGGAATTTTG+TGG | - | chr2_4:43361085-43361104 | Msa0329590:CDS | 35.0% |
AAGTTGTCCTTGTCAAAAAG+TGG | - | chr2_4:43361246-43361265 | Msa0329590:CDS | 35.0% | |
!!! | TTGACAACCACTTTTTGACA+AGG | + | chr2_4:43361256-43361275 | None:intergenic | 35.0% |
GAAAGATTGTGATGACTGAT+TGG | + | chr2_4:43361335-43361354 | None:intergenic | 35.0% | |
! | CTCAAAGAATTAGTTGGTCT+AGG | + | chr2_4:43361357-43361376 | None:intergenic | 35.0% |
! | AATGTGGTGTTAGGAAAGAT+TGG | + | chr2_4:43361608-43361627 | None:intergenic | 35.0% |
!! | TTAAGGAAGGCATTTCAATG+TGG | + | chr2_4:43361624-43361643 | None:intergenic | 35.0% |
!!! | GGGAGTATTTTTCTTAAGGA+AGG | + | chr2_4:43361637-43361656 | None:intergenic | 35.0% |
!!! | CAGAGGGAGTATTTTTCTTA+AGG | + | chr2_4:43361641-43361660 | None:intergenic | 35.0% |
CTTAAGAAAAATACTCCCTC+TGG | - | chr2_4:43361639-43361658 | Msa0329590:intron | 35.0% | |
AAGGGTCCTATAATTAGAGA+CGG | + | chr2_4:43361777-43361796 | None:intergenic | 35.0% | |
! | TATCCTTTAAGAGAGAGAGT+TGG | - | chr2_4:43361873-43361892 | Msa0329590:intron | 35.0% |
AAACCAACTCTCTCTCTTAA+AGG | + | chr2_4:43361879-43361898 | None:intergenic | 35.0% | |
TGTAGTTGGAAATAGCAAAG+GGG | - | chr2_4:43361980-43361999 | Msa0329590:intron | 35.0% | |
! | AGCAAAGGGGTCTTATAAAA+AGG | - | chr2_4:43361993-43362012 | Msa0329590:intron | 35.0% |
! | GCAAAGGGGTCTTATAAAAA+GGG | - | chr2_4:43361994-43362013 | Msa0329590:intron | 35.0% |
! | AAGGGTCTTATAATTAGGGA+CGG | - | chr2_4:43362034-43362053 | Msa0329590:intron | 35.0% |
!! | CAAATATGGTGTTGTTGTAG+CGG | - | chr2_4:43362408-43362427 | Msa0329590:intron | 35.0% |
CAACCAACCATTACATGATT+GGG | + | chr2_4:43362445-43362464 | None:intergenic | 35.0% | |
ACAACCAACCATTACATGAT+TGG | + | chr2_4:43362446-43362465 | None:intergenic | 35.0% | |
! | AATCATGTAATGGTTGGTTG+TGG | - | chr2_4:43362445-43362464 | Msa0329590:intron | 35.0% |
! | ATCATGTAATGGTTGGTTGT+GGG | - | chr2_4:43362446-43362465 | Msa0329590:intron | 35.0% |
! | AATGAAAAGGAGCATGCAAA+GGG | + | chr2_4:43362482-43362501 | None:intergenic | 35.0% |
! | AAATGAAAAGGAGCATGCAA+AGG | + | chr2_4:43362483-43362502 | None:intergenic | 35.0% |
! | AATGAAAAGGAGCATGCAAA+AGG | + | chr2_4:43362482-43362501 | None:intergenic | 35.0% |
! | AATGAAAAGGAGCATGCAAA+GGG | + | chr2_4:43362482-43362501 | None:intergenic | 35.0% |
! | AAATGAAAAGGAGCATGCAA+AGG | + | chr2_4:43362483-43362502 | None:intergenic | 35.0% |
! | AATGAAAAGGAGCATGCAAA+AGG | + | chr2_4:43362482-43362501 | None:intergenic | 35.0% |
! | AATGAAAAGGAGCATGCAAA+GGG | + | chr2_4:43362482-43362501 | None:intergenic | 35.0% |
! | AAATGAAAAGGAGCATGCAA+AGG | + | chr2_4:43362483-43362502 | None:intergenic | 35.0% |
!! | GCTCCTTTTCATTTTTCCTT+TGG | - | chr2_4:43362489-43362508 | Msa0329590:intron | 35.0% |
! | AATGAAAAGGAGCATGCAAA+GGG | + | chr2_4:43362482-43362501 | None:intergenic | 35.0% |
! | AAATGAAAAGGAGCATGCAA+AGG | + | chr2_4:43362483-43362502 | None:intergenic | 35.0% |
! | AATGAAAAGGAGCATGCAAA+AGG | + | chr2_4:43362482-43362501 | None:intergenic | 35.0% |
! | AATGAAAAGGAGCATGCAAA+GGG | + | chr2_4:43362482-43362501 | None:intergenic | 35.0% |
! | AAATGAAAAGGAGCATGCAA+AGG | + | chr2_4:43362483-43362502 | None:intergenic | 35.0% |
! | AATGAAAAGGAGCATGCAAA+AGG | + | chr2_4:43362482-43362501 | None:intergenic | 35.0% |
CAATTGCTTGATTGTAAGAG+GGG | + | chr2_4:43362969-43362988 | None:intergenic | 35.0% | |
!!! | GGATTTTGAGTTTTTTTCGG+AGG | + | chr2_4:43363061-43363080 | None:intergenic | 35.0% |
!!! | GGCGGATTTTGAGTTTTTTT+CGG | + | chr2_4:43363064-43363083 | None:intergenic | 35.0% |
AATGGTAAATAGTGCTCTTG+TGG | + | chr2_4:43363085-43363104 | None:intergenic | 35.0% | |
GATAGTGAAAAATGAGATGG+TGG | - | chr2_4:43363370-43363389 | Msa0329590:intron | 35.0% | |
! | AGATGGTGGTAAATAACATC+CGG | - | chr2_4:43363384-43363403 | Msa0329590:intron | 35.0% |
CAATATTCATTGTTCCAAGC+TGG | - | chr2_4:43363494-43363513 | Msa0329590:intron | 35.0% | |
TAGGTTAAGGGTCTATTAAC+CGG | - | chr2_4:43363731-43363750 | Msa0329590:intron | 35.0% | |
TAATGTTAACAAGTGCCCTT+GGG | + | chr2_4:43363898-43363917 | None:intergenic | 35.0% | |
TTAATGTTAACAAGTGCCCT+TGG | + | chr2_4:43363899-43363918 | None:intergenic | 35.0% | |
ACCGCTGAACTTCATATTAT+TGG | + | chr2_4:43364556-43364575 | None:intergenic | 35.0% | |
ATTCCACCAACAATCAAACT+CGG | - | chr2_4:43364602-43364621 | Msa0329590:intron | 35.0% | |
AAAGAACCGAGTTTGATTGT+TGG | + | chr2_4:43364611-43364630 | None:intergenic | 35.0% | |
!! | ATATAAAAGGGTGCCAGTTT+AGG | + | chr2_4:43364753-43364772 | None:intergenic | 35.0% |
TGTGGAAGCTAAAATCGAAA+TGG | + | chr2_4:43364923-43364942 | None:intergenic | 35.0% | |
!!! | TTTCGATTTTAGCTTCCACA+TGG | - | chr2_4:43364923-43364942 | Msa0329590:intron | 35.0% |
! | TTTTGCAGTGGTATTTTCAG+CGG | - | chr2_4:43365094-43365113 | Msa0329590:intron | 35.0% |
ACAATTGCAACTATACGGTT+TGG | - | chr2_4:43365132-43365151 | Msa0329590:intron | 35.0% | |
CATACTACTAGTGGAAATAG+TGG | - | chr2_4:43365164-43365183 | Msa0329590:intron | 35.0% | |
GTAATTGTTGAATTCTCACG+GGG | + | chr2_4:43365227-43365246 | None:intergenic | 35.0% | |
TATGATGTCAGCTTAGTAGA+CGG | - | chr2_4:43365434-43365453 | Msa0329590:intron | 35.0% | |
TGCAAATTAAAAGCAGCACA+AGG | + | chr2_4:43365602-43365621 | None:intergenic | 35.0% | |
ATCATCATACGCATAGCTAT+AGG | + | chr2_4:43365714-43365733 | None:intergenic | 35.0% | |
AAAAACAACGTGATAATCGG+TGG | + | chr2_4:43365762-43365781 | None:intergenic | 35.0% | |
AACAGAGAGAAATAACAGAC+AGG | - | chr2_4:43366095-43366114 | Msa0329590:CDS | 35.0% | |
TAACAGACAGGAAAGAAAAG+AGG | - | chr2_4:43366107-43366126 | Msa0329590:CDS | 35.0% | |
! | TTGCTGAGAGCTTTTGAATA+CGG | + | chr2_4:43366217-43366236 | None:intergenic | 35.0% |
! | CTAGGTTGAAGTCTAAGTTA+GGG | + | chr2_4:43366270-43366289 | None:intergenic | 35.0% |
! | CCATCCTTGACAATTGACTT+GGG | + | chr2_4:43360125-43360144 | None:intergenic | 40.0% |
TCCATCCTTGACAATTGACT+TGG | + | chr2_4:43360126-43360145 | None:intergenic | 40.0% | |
AAAATGCTACCACTCTCACA+TGG | - | chr2_4:43360319-43360338 | Msa0329590:intron | 40.0% | |
AAATGCTACCACTCTCACAT+GGG | - | chr2_4:43360320-43360339 | Msa0329590:intron | 40.0% | |
! | TCCGGCTCATTTGCTTTATT+AGG | - | chr2_4:43360557-43360576 | Msa0329590:intron | 40.0% |
CAAGCGGATACGAATGAAAT+TGG | + | chr2_4:43360633-43360652 | None:intergenic | 40.0% | |
! | CCATTCTCCTTTGAAAGCAA+CGG | - | chr2_4:43360889-43360908 | Msa0329590:CDS | 40.0% |
! | TGGATTAGAACGTGATTGGA+GGG | + | chr2_4:43360967-43360986 | None:intergenic | 40.0% |
!! | ATGGATTAGAACGTGATTGG+AGG | + | chr2_4:43360968-43360987 | None:intergenic | 40.0% |
TCCAATCACGTTCTAATCCA+TGG | - | chr2_4:43360967-43360986 | Msa0329590:CDS | 40.0% | |
!! | TCCATGGATTAGAACGTGAT+TGG | + | chr2_4:43360971-43360990 | None:intergenic | 40.0% |
AAGGGGACACATTCATATCT+AGG | - | chr2_4:43360993-43361012 | Msa0329590:CDS | 40.0% | |
AGTCTTCCTACGAGTCAATA+TGG | - | chr2_4:43361075-43361094 | Msa0329590:CDS | 40.0% | |
! | TGTTAGGAAAGATTGGTGTC+AGG | + | chr2_4:43361601-43361620 | None:intergenic | 40.0% |
AGGCATTTCAATGTGGTGTT+AGG | + | chr2_4:43361617-43361636 | None:intergenic | 40.0% | |
!! | AGACGGAGGTAGTACTTTTT+AGG | + | chr2_4:43361760-43361779 | None:intergenic | 40.0% |
CTACCTCCGTCTCTAATTAT+AGG | - | chr2_4:43361768-43361787 | Msa0329590:intron | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | - | chr2_4:43362070-43362089 | Msa0329590:intron | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | - | chr2_4:43362071-43362090 | Msa0329590:intron | 40.0% | |
TAGATTCTTAAGCAGTGCAC+CGG | + | chr2_4:43362210-43362229 | None:intergenic | 40.0% | |
TCTCCCAATCATGTAATGGT+TGG | - | chr2_4:43362439-43362458 | Msa0329590:intron | 40.0% | |
TTCAGAAAAGAAGCTCCTCT+TGG | - | chr2_4:43362929-43362948 | Msa0329590:intron | 40.0% | |
TCAGAAAAGAAGCTCCTCTT+GGG | - | chr2_4:43362930-43362949 | Msa0329590:intron | 40.0% | |
!! | TCGGAGGTGTCAAATAATTG+TGG | + | chr2_4:43363045-43363064 | None:intergenic | 40.0% |
TGTGAATGTTTCAACCAGCT+TGG | + | chr2_4:43363511-43363530 | None:intergenic | 40.0% | |
! | AGCAATTTGAGGCATTCACA+CGG | + | chr2_4:43363654-43363673 | None:intergenic | 40.0% |
TGTCTTTGGTCAGCAATTTG+AGG | + | chr2_4:43363665-43363684 | None:intergenic | 40.0% | |
AATGTTAACAAGTGCCCTTG+GGG | + | chr2_4:43363897-43363916 | None:intergenic | 40.0% | |
!!! | TTCACTTGTTGTGGTGGTTT+TGG | - | chr2_4:43364629-43364648 | Msa0329590:intron | 40.0% |
CAATTATTGTGGCAGCCAAT+TGG | - | chr2_4:43364665-43364684 | Msa0329590:intron | 40.0% | |
!! | AATCGCTAGTGTTGACCAAT+TGG | + | chr2_4:43364683-43364702 | None:intergenic | 40.0% |
AATGCAACATTAGCAACCAC+CGG | - | chr2_4:43365188-43365207 | Msa0329590:intron | 40.0% | |
!! | ACGGGGTTTTAACATGAATC+CGG | + | chr2_4:43365210-43365229 | None:intergenic | 40.0% |
!! | CAAATGGACTGGTCATTTCT+GGG | - | chr2_4:43365256-43365275 | Msa0329590:intron | 40.0% |
!! | AAATGGACTGGTCATTTCTG+GGG | - | chr2_4:43365257-43365276 | Msa0329590:intron | 40.0% |
!! | ACAGGAGAAGTTTTTGGAGA+CGG | + | chr2_4:43365306-43365325 | None:intergenic | 40.0% |
CAAAAACTTCTCCTGTGTCA+CGG | - | chr2_4:43365310-43365329 | Msa0329590:intron | 40.0% | |
AAAAACTTCTCCTGTGTCAC+GGG | - | chr2_4:43365311-43365330 | Msa0329590:intron | 40.0% | |
CTAACGGAACAATTTCCATC+GGG | + | chr2_4:43365469-43365488 | None:intergenic | 40.0% | |
CCTAACGGAACAATTTCCAT+CGG | + | chr2_4:43365470-43365489 | None:intergenic | 40.0% | |
ATGGAAATTGTTCCGTTAGG+TGG | - | chr2_4:43365470-43365489 | Msa0329590:intron | 40.0% | |
TTGTCCTACAGATTTGAACG+CGG | - | chr2_4:43365520-43365539 | Msa0329590:intron | 40.0% | |
AACAAAAAATGGGACGGTTG+TGG | - | chr2_4:43365565-43365584 | Msa0329590:intron | 40.0% | |
! | TTGCAGTTTTTCTGTTGCGT+TGG | - | chr2_4:43365617-43365636 | Msa0329590:intron | 40.0% |
! | TGCAGTTTTTCTGTTGCGTT+GGG | - | chr2_4:43365618-43365637 | Msa0329590:intron | 40.0% |
ACACTTGGCTCACAAGTATT+TGG | + | chr2_4:43365656-43365675 | None:intergenic | 40.0% | |
ATCTAACCTGGCGTTATTTG+AGG | + | chr2_4:43365792-43365811 | None:intergenic | 40.0% | |
!!! | TATTAGTTTGCACCCGCTTT+TGG | - | chr2_4:43365922-43365941 | Msa0329590:intron | 40.0% |
GTTGAAGTCTAAGTTAGGGT+AGG | + | chr2_4:43366266-43366285 | None:intergenic | 40.0% | |
! | CCTAGGTTGAAGTCTAAGTT+AGG | + | chr2_4:43366271-43366290 | None:intergenic | 40.0% |
CCTAACTTAGACTTCAACCT+AGG | - | chr2_4:43366268-43366287 | Msa0329590:CDS | 40.0% | |
GGGATTGTGATCTGTTGTAA+GGG | + | chr2_4:43366323-43366342 | None:intergenic | 40.0% | |
CCCAAGTCAATTGTCAAGGA+TGG | - | chr2_4:43360122-43360141 | Msa0329590:intron | 45.0% | |
GCAAGATTGCTTCTGTGTGT+TGG | - | chr2_4:43360267-43360286 | Msa0329590:intron | 45.0% | |
! | TCTTTTCTCCCATGTGAGAG+TGG | + | chr2_4:43360331-43360350 | None:intergenic | 45.0% |
! | CCGTTGCTTTCAAAGGAGAA+TGG | + | chr2_4:43360892-43360911 | None:intergenic | 45.0% |
! | GAATGTGTCCCCTTTTTCCA+TGG | + | chr2_4:43360987-43361006 | None:intergenic | 45.0% |
GGTCCTATAATTAGAGACGG+AGG | + | chr2_4:43361774-43361793 | None:intergenic | 45.0% | |
! | GGTCTTATAATTAGGGACGG+AGG | - | chr2_4:43362037-43362056 | Msa0329590:intron | 45.0% |
! | GTCTTGTTAATCGGTGTCTC+CGG | - | chr2_4:43362188-43362207 | Msa0329590:intron | 45.0% |
TATTAAAACTGTGGGTGCGG+TGG | + | chr2_4:43362359-43362378 | None:intergenic | 45.0% | |
! | AAAAGGAGCATGCAAAGGGA+GGG | + | chr2_4:43362478-43362497 | None:intergenic | 45.0% |
! | AAAAGGAGCATGCAAAGGGA+GGG | + | chr2_4:43362478-43362497 | None:intergenic | 45.0% |
AAGGGAGGAATTGAACCCAA+AGG | + | chr2_4:43362689-43362708 | None:intergenic | 45.0% | |
! | AAAAGGAGCATGCAAAGGGA+GGG | + | chr2_4:43362478-43362497 | None:intergenic | 45.0% |
TTGCTTGATTGTAAGAGGGG+TGG | + | chr2_4:43362966-43362985 | None:intergenic | 45.0% | |
GGTAAATAGTGCTCTTGTGG+CGG | + | chr2_4:43363082-43363101 | None:intergenic | 45.0% | |
GAACCGAGTTTGATTGTTGG+TGG | + | chr2_4:43364608-43364627 | None:intergenic | 45.0% | |
! | CTCGGTTCTTTCACTTGTTG+TGG | - | chr2_4:43364620-43364639 | Msa0329590:intron | 45.0% |
!! | GGTTCTTTCACTTGTTGTGG+TGG | - | chr2_4:43364623-43364642 | Msa0329590:intron | 45.0% |
TTGCAGTTCCCTTCCTAAAC+TGG | - | chr2_4:43364737-43364756 | Msa0329590:intron | 45.0% | |
!! | AAAGGGTGCCAGTTTAGGAA+GGG | + | chr2_4:43364748-43364767 | None:intergenic | 45.0% |
!! | AAAAGGGTGCCAGTTTAGGA+AGG | + | chr2_4:43364749-43364768 | None:intergenic | 45.0% |
!! | ATGACATTGGCTCAACCATG+TGG | + | chr2_4:43364941-43364960 | None:intergenic | 45.0% |
CCACTAGTAGTATGTGAAGC+TGG | + | chr2_4:43365158-43365177 | None:intergenic | 45.0% | |
CCAGCTTCACATACTACTAG+TGG | - | chr2_4:43365155-43365174 | Msa0329590:intron | 45.0% | |
!! | GGGTTTTAACATGAATCCGG+TGG | + | chr2_4:43365207-43365226 | None:intergenic | 45.0% |
AAATGACCAGTCCATTTGGC+AGG | + | chr2_4:43365254-43365273 | None:intergenic | 45.0% | |
CCAGAAATGACCAGTCCATT+TGG | + | chr2_4:43365258-43365277 | None:intergenic | 45.0% | |
!! | CCAAATGGACTGGTCATTTC+TGG | - | chr2_4:43365255-43365274 | Msa0329590:intron | 45.0% |
! | CGTGACACAGGAGAAGTTTT+TGG | + | chr2_4:43365312-43365331 | None:intergenic | 45.0% |
! | ATTTTCGCCAGTGTCAAAGG+CGG | + | chr2_4:43365383-43365402 | None:intergenic | 45.0% |
! | GAGATTTTCGCCAGTGTCAA+AGG | + | chr2_4:43365386-43365405 | None:intergenic | 45.0% |
AGACGGTTATAATGTCCCGA+TGG | - | chr2_4:43365451-43365470 | Msa0329590:intron | 45.0% | |
CCGATGGAAATTGTTCCGTT+AGG | - | chr2_4:43365467-43365486 | Msa0329590:intron | 45.0% | |
ATTGTTCCGTTAGGTGGTTC+CGG | - | chr2_4:43365476-43365495 | Msa0329590:intron | 45.0% | |
! | CGTGCTGTTACATGACTTAC+CGG | + | chr2_4:43365498-43365517 | None:intergenic | 45.0% |
CGGTAAGTCATGTAACAGCA+CGG | - | chr2_4:43365496-43365515 | Msa0329590:intron | 45.0% | |
GGTAAGTCATGTAACAGCAC+GGG | - | chr2_4:43365497-43365516 | Msa0329590:intron | 45.0% | |
CATACCGCGTTCAAATCTGT+AGG | + | chr2_4:43365527-43365546 | None:intergenic | 45.0% | |
TTTGAACGCGGTATGTCCAA+CGG | - | chr2_4:43365532-43365551 | Msa0329590:intron | 45.0% | |
TGTTGCGTTGGGAATCATTC+AGG | - | chr2_4:43365629-43365648 | Msa0329590:intron | 45.0% | |
ACGCATAGCTATAGGCTTGA+GGG | + | chr2_4:43365706-43365725 | None:intergenic | 45.0% | |
TACGCATAGCTATAGGCTTG+AGG | + | chr2_4:43365707-43365726 | None:intergenic | 45.0% | |
! | AACCTGGCGTTATTTGAGGT+AGG | + | chr2_4:43365788-43365807 | None:intergenic | 45.0% |
CTGTTTACTGCGTTCTGTGT+TGG | + | chr2_4:43366029-43366048 | None:intergenic | 45.0% | |
! | TTGAATACGGACTGCACTAG+TGG | + | chr2_4:43366204-43366223 | None:intergenic | 45.0% |
CTAGGTCATAAGTGCAAACG+TGG | + | chr2_4:43366241-43366260 | None:intergenic | 45.0% | |
CACGTTTGCACTTATGACCT+AGG | - | chr2_4:43366239-43366258 | Msa0329590:CDS | 45.0% | |
TCTAAGTTAGGGTAGGTCCT+AGG | + | chr2_4:43366259-43366278 | None:intergenic | 45.0% | |
TCTCAGATCTAGGAGTTCCT+AGG | + | chr2_4:43366288-43366307 | None:intergenic | 45.0% | |
TGAGATGGGATCTCAGATCT+AGG | + | chr2_4:43366298-43366317 | None:intergenic | 45.0% | |
CTGTTGTAAGGGAGTGAGAT+GGG | + | chr2_4:43366312-43366331 | None:intergenic | 45.0% | |
TCTGTTGTAAGGGAGTGAGA+TGG | + | chr2_4:43366313-43366332 | None:intergenic | 45.0% | |
GGGGATTGTGATCTGTTGTA+AGG | + | chr2_4:43366324-43366343 | None:intergenic | 45.0% | |
!!! | ATCAATATTTTTTTTATAAA+AGG | - | chr2_4:43362148-43362167 | Msa0329590:intron | 5.0% |
!! | TAAAAAAATGATTTAAAAAT+GGG | + | chr2_4:43363253-43363272 | None:intergenic | 5.0% |
!! | ATAAAAAAATGATTTAAAAA+TGG | + | chr2_4:43363254-43363273 | None:intergenic | 5.0% |
!! | AAGGGCACCGTTGCTTTCAA+AGG | + | chr2_4:43360899-43360918 | None:intergenic | 50.0% |
GGTTGCTTGACCAATACTCC+AGG | - | chr2_4:43362298-43362317 | Msa0329590:intron | 50.0% | |
TTGACCAATACTCCAGGAGC+CGG | - | chr2_4:43362304-43362323 | Msa0329590:intron | 50.0% | |
! | GAAAAGGAGCATGCAAAGGG+AGG | + | chr2_4:43362479-43362498 | None:intergenic | 50.0% |
! | GAAAAGGAGCATGCAAAGGG+AGG | + | chr2_4:43362479-43362498 | None:intergenic | 50.0% |
! | GAAAAGGAGCATGCAAAGGG+AGG | + | chr2_4:43362479-43362498 | None:intergenic | 50.0% |
! | GAAAAGGAGCATGCAAAGGG+AGG | + | chr2_4:43362479-43362498 | None:intergenic | 50.0% |
! | GAAAAGGAGCATGCAAAGGG+AGG | + | chr2_4:43362479-43362498 | None:intergenic | 50.0% |
GTGGCGTTTCAAATCCCAAG+AGG | + | chr2_4:43362947-43362966 | None:intergenic | 50.0% | |
! | AACTAATATCCCAGGGGCAC+CGG | + | chr2_4:43363753-43363772 | None:intergenic | 50.0% |
ATTCCTCAACAAGTGCCCCA+AGG | - | chr2_4:43363879-43363898 | Msa0329590:intron | 50.0% | |
TTCCTCAACAAGTGCCCCAA+GGG | - | chr2_4:43363880-43363899 | Msa0329590:intron | 50.0% | |
CAATTACAGCGCCTGCCAAA+TGG | - | chr2_4:43365240-43365259 | Msa0329590:intron | 50.0% | |
TCCGGCAAAGTAGCATGTGA+TGG | - | chr2_4:43365344-43365363 | Msa0329590:intron | 50.0% | |
!! | GCCATCACATGCTACTTTGC+CGG | + | chr2_4:43365348-43365367 | None:intergenic | 50.0% |
GACACTGGCGAAAATCTCTC+TGG | - | chr2_4:43365388-43365407 | Msa0329590:intron | 50.0% | |
GACTTACCGGAACCACCTAA+CGG | + | chr2_4:43365485-43365504 | None:intergenic | 50.0% | |
TAAAAGCAGCACAAGGACCC+TGG | + | chr2_4:43365595-43365614 | None:intergenic | 50.0% | |
ACAACGTGATAATCGGTGGC+CGG | + | chr2_4:43365758-43365777 | None:intergenic | 50.0% | |
GTCCTACCTCAAATAACGCC+AGG | - | chr2_4:43365783-43365802 | Msa0329590:intron | 50.0% | |
! | AGTGGATTTCCTTCCTGGCT+TGG | + | chr2_4:43366186-43366205 | None:intergenic | 50.0% |
!! | GCACTAGTGGATTTCCTTCC+TGG | + | chr2_4:43366191-43366210 | None:intergenic | 50.0% |
GAGAAAACTCGTGCGACGCA+CGG | - | chr2_4:43360736-43360755 | Msa0329590:CDS | 55.0% | |
AGAAAACTCGTGCGACGCAC+GGG | - | chr2_4:43360737-43360756 | Msa0329590:CDS | 55.0% | |
CGCACGGGTCAAAAGTCTAG+TGG | - | chr2_4:43360752-43360771 | Msa0329590:CDS | 55.0% | |
GGATCTCCATGGAGACCCAT+GGG | - | chr2_4:43362331-43362350 | Msa0329590:intron | 55.0% | |
GTCTATTAACCGGTGCCCCT+GGG | - | chr2_4:43363741-43363760 | Msa0329590:intron | 55.0% | |
!! | GGACTGGTCATTTCTGGGGA+CGG | - | chr2_4:43365261-43365280 | Msa0329590:intron | 55.0% |
GACCAGCACGTTCACTTGTC+CGG | - | chr2_4:43365736-43365755 | Msa0329590:intron | 55.0% | |
AGGTGACGTTGCACCGAACT+TGG | + | chr2_4:43366150-43366169 | None:intergenic | 55.0% | |
GGTGCAACGTCACCTACTCT+GGG | - | chr2_4:43366155-43366174 | Msa0329590:CDS | 55.0% | |
GTGCAACGTCACCTACTCTG+GGG | - | chr2_4:43366156-43366175 | Msa0329590:CDS | 55.0% | |
TGCAACGTCACCTACTCTGG+GGG | - | chr2_4:43366157-43366176 | Msa0329590:CDS | 55.0% | |
ACCAATACTCCAGGAGCCGG+TGG | - | chr2_4:43362307-43362326 | Msa0329590:intron | 60.0% | |
AATACTCCAGGAGCCGGTGG+CGG | - | chr2_4:43362310-43362329 | Msa0329590:intron | 60.0% | |
TCTCCATGGAGATCCGCCAC+CGG | + | chr2_4:43362326-43362345 | None:intergenic | 60.0% | |
CGGATCTCCATGGAGACCCA+TGG | - | chr2_4:43362330-43362349 | Msa0329590:intron | 60.0% | |
GGTCTATTAACCGGTGCCCC+TGG | - | chr2_4:43363740-43363759 | Msa0329590:intron | 60.0% | |
! | TGCCCTTGGGGCACTTGTTG+AGG | + | chr2_4:43363885-43363904 | None:intergenic | 60.0% |
ACAGCGCCTGCCAAATGGAC+TGG | - | chr2_4:43365245-43365264 | Msa0329590:intron | 60.0% | |
TCCTGTGTCACGGGTGACTG+TGG | - | chr2_4:43365320-43365339 | Msa0329590:intron | 60.0% | |
TCCACAGTCACCCGTGACAC+AGG | + | chr2_4:43365324-43365343 | None:intergenic | 60.0% | |
GTCACGGGTGACTGTGGATC+CGG | - | chr2_4:43365326-43365345 | Msa0329590:intron | 60.0% | |
GTAGCATGTGATGGCCGCAG+CGG | - | chr2_4:43365353-43365372 | Msa0329590:intron | 60.0% | |
TCAAAGGCGGTGATCCGCTG+CGG | + | chr2_4:43365370-43365389 | None:intergenic | 60.0% | |
CGGATCACCGCCTTTGACAC+TGG | - | chr2_4:43365373-43365392 | Msa0329590:intron | 60.0% | |
CGGTGCAACGTCACCTACTC+TGG | - | chr2_4:43366154-43366173 | Msa0329590:CDS | 60.0% | |
!! | GCCACCGGCTCCTGGAGTAT+TGG | + | chr2_4:43362311-43362330 | None:intergenic | 65.0% |
GTGGCTCCCATGGGTCTCCA+TGG | + | chr2_4:43362340-43362359 | None:intergenic | 65.0% | |
GGCCGGACAAGTGAACGTGC+TGG | + | chr2_4:43365741-43365760 | None:intergenic | 65.0% | |
! | GGCTTGGTAGCCCCCAGAGT+AGG | + | chr2_4:43366170-43366189 | None:intergenic | 65.0% |
! | ACTCTGGGGGCTACCAAGCC+AGG | - | chr2_4:43366170-43366189 | Msa0329590:CDS | 65.0% |
TGGGGGCTACCAAGCCAGGA+AGG | - | chr2_4:43366174-43366193 | Msa0329590:CDS | 65.0% | |
!! | GAGCCGGTGGCGGATCTCCA+TGG | - | chr2_4:43362320-43362339 | Msa0329590:intron | 70.0% |
GTGGGTGCGGTGGCTCCCAT+GGG | + | chr2_4:43362349-43362368 | None:intergenic | 70.0% | |
TGTGGGTGCGGTGGCTCCCA+TGG | + | chr2_4:43362350-43362369 | None:intergenic | 70.0% | |
TGGGACGGTTGTGGCGTGCC+AGG | - | chr2_4:43365574-43365593 | Msa0329590:intron | 70.0% | |
GGGACGGTTGTGGCGTGCCA+GGG | - | chr2_4:43365575-43365594 | Msa0329590:intron | 70.0% | |
!! | GGAGATCCGCCACCGGCTCC+TGG | + | chr2_4:43362319-43362338 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 43360052 | 43366348 | 43360052 | ID=Msa0329590;Name=Msa0329590 |
chr2_4 | mRNA | 43360052 | 43366348 | 43360052 | ID=Msa0329590-mRNA-1;Parent=Msa0329590;Name=Msa0329590-mRNA-1;_AED=0.50;_eAED=0.50;_QI=0|0|0|0.75|1|1|4|0|340 |
chr2_4 | exon | 43366036 | 43366348 | 43366036 | ID=Msa0329590-mRNA-1:exon:13222;Parent=Msa0329590-mRNA-1 |
chr2_4 | exon | 43360859 | 43361298 | 43360859 | ID=Msa0329590-mRNA-1:exon:13221;Parent=Msa0329590-mRNA-1 |
chr2_4 | exon | 43360596 | 43360777 | 43360596 | ID=Msa0329590-mRNA-1:exon:13220;Parent=Msa0329590-mRNA-1 |
chr2_4 | exon | 43360052 | 43360139 | 43360052 | ID=Msa0329590-mRNA-1:exon:13219;Parent=Msa0329590-mRNA-1 |
chr2_4 | CDS | 43366036 | 43366348 | 43366036 | ID=Msa0329590-mRNA-1:cds;Parent=Msa0329590-mRNA-1 |
chr2_4 | CDS | 43360859 | 43361298 | 43360859 | ID=Msa0329590-mRNA-1:cds;Parent=Msa0329590-mRNA-1 |
chr2_4 | CDS | 43360596 | 43360777 | 43360596 | ID=Msa0329590-mRNA-1:cds;Parent=Msa0329590-mRNA-1 |
chr2_4 | CDS | 43360052 | 43360139 | 43360052 | ID=Msa0329590-mRNA-1:cds;Parent=Msa0329590-mRNA-1 |
Gene Sequence |
Protein sequence |